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Receptor
PDB id Resolution Class Description Source Keywords
3FSY 1.97 Å EC: 2.3.1.117 STRUCTURE OF TETRAHYDRODIPICOLINATE N-SUCCINYLTRANSFERASE (RV1201C;DAPD) IN COMPLEX WITH SUCCINYL-COA FROM MYCOBACTERT UBERCULOSIS MYCOBACTERIUM TUBERCULOSIS BETA HELIX L BETA H DOMAIN ACYLTRANSFERASE TRANSFERASE
Ref.: THE THREE-DIMENSIONAL STRUCTURE OF A MYCOBACTERIAL PROVIDES INSIGHTS INTO DAPD DIVERSITY AND REVEALS U PARTICULARS ABOUT THE ENZYMATIC MECHANISM. J.MOL.BIOL. V. 389 863 2009
Ligand
Ligand Chain:Residue Validity Ligand Warnings Binding Data NGL Viewer Molecular Weight (Da) Formula SMILES
ACY B:332;
C:331;
D:331;
Invalid;
Invalid;
Invalid;
none;
none;
none;
submit data
60.052 C2 H4 O2 CC(=O...
MG A:333;
A:334;
A:335;
A:336;
B:333;
D:332;
D:333;
E:332;
E:333;
E:334;
Part of Protein;
Part of Protein;
Part of Protein;
Part of Protein;
Part of Protein;
Part of Protein;
Part of Protein;
Part of Protein;
Part of Protein;
Part of Protein;
none;
none;
none;
none;
none;
none;
none;
none;
none;
none;
submit data
24.305 Mg [Mg+2...
MPD A:340;
B:340;
D:340;
Invalid;
Invalid;
Invalid;
none;
none;
none;
submit data
118.174 C6 H14 O2 C[C@@...
NA A:337;
B:334;
D:334;
E:335;
Part of Protein;
Part of Protein;
Part of Protein;
Part of Protein;
none;
none;
none;
none;
submit data
22.99 Na [Na+]
SCA A:331;
A:332;
B:331;
E:331;
Valid;
Valid;
Valid;
Valid;
none;
none;
none;
none;
submit data
867.607 C25 H40 N7 O19 P3 S CC(C)...
View in 3D viewer
90% Homology Family
Leader
PDB id Resolution Class Description Source Keywords
3FSY 1.97 Å EC: 2.3.1.117 STRUCTURE OF TETRAHYDRODIPICOLINATE N-SUCCINYLTRANSFERASE (RV1201C;DAPD) IN COMPLEX WITH SUCCINYL-COA FROM MYCOBACTERT UBERCULOSIS MYCOBACTERIUM TUBERCULOSIS BETA HELIX L BETA H DOMAIN ACYLTRANSFERASE TRANSFERASE
Ref.: THE THREE-DIMENSIONAL STRUCTURE OF A MYCOBACTERIAL PROVIDES INSIGHTS INTO DAPD DIVERSITY AND REVEALS U PARTICULARS ABOUT THE ENZYMATIC MECHANISM. J.MOL.BIOL. V. 389 863 2009
Members (1)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 3 families.
1 3FSY - SCA C25 H40 N7 O19 P3 S CC(C)(CO[P....
70% Homology Family (3)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 2 families.
1 5E3Q - SCA C25 H40 N7 O19 P3 S CC(C)(CO[P....
2 5E3R - NPI C7 H13 N O4 C(CCC(=O)O....
3 3FSY - SCA C25 H40 N7 O19 P3 S CC(C)(CO[P....
50% Homology Family (3)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 2 families.
1 5E3Q - SCA C25 H40 N7 O19 P3 S CC(C)(CO[P....
2 5E3R - NPI C7 H13 N O4 C(CCC(=O)O....
3 3FSY - SCA C25 H40 N7 O19 P3 S CC(C)(CO[P....
Polypharmacology
Similar Ligands
Ligand no: 1; Ligand: SCA; Similar ligands found: 140
No: Ligand ECFP6 Tc MDL keys Tc
1 SCA 1 1
2 GRA 0.899225 1
3 1HE 0.889764 0.955556
4 BCO 0.889764 0.977273
5 MLC 0.889764 1
6 1VU 0.874016 0.966292
7 HGG 0.869231 1
8 IVC 0.860465 0.988506
9 3HC 0.860465 0.988506
10 ACO 0.857143 0.966292
11 HXC 0.856061 0.955556
12 CAA 0.853846 0.988506
13 OXK 0.851562 1
14 TGC 0.849624 0.988636
15 3KK 0.84375 0.977273
16 CO8 0.843284 0.955556
17 COS 0.84127 0.955056
18 CAO 0.84127 0.944444
19 MYA 0.837037 0.955556
20 UCC 0.837037 0.955556
21 MFK 0.837037 0.955556
22 5F9 0.837037 0.955556
23 DCC 0.837037 0.955556
24 ST9 0.837037 0.955556
25 SCO 0.834646 0.977012
26 FAQ 0.834586 0.977273
27 CO6 0.830769 0.977273
28 CMC 0.830769 0.977273
29 MCA 0.825758 0.988636
30 2MC 0.824427 0.934783
31 CMX 0.820312 0.977012
32 FYN 0.815385 0.977012
33 3CP 0.813433 0.977273
34 30N 0.8125 0.894737
35 COO 0.81203 0.977273
36 SCD 0.810606 0.977012
37 SOP 0.80916 0.955056
38 COK 0.80916 0.955056
39 BCA 0.807407 0.966292
40 YNC 0.807143 0.966292
41 MC4 0.80597 0.924731
42 COA 0.80315 0.977012
43 0T1 0.80315 0.954545
44 1CZ 0.80292 0.988636
45 DCA 0.801587 0.932584
46 BYC 0.8 0.977273
47 COW 0.8 0.966292
48 IRC 0.8 0.988506
49 2KQ 0.8 0.977528
50 1GZ 0.8 0.966292
51 COF 0.8 0.934066
52 CS8 0.798561 0.945055
53 HDC 0.792857 0.955556
54 2CP 0.792593 0.966292
55 A1S 0.791045 0.955056
56 ETB 0.787402 0.9
57 FCX 0.78626 0.944444
58 AMX 0.784615 0.965517
59 MCD 0.781955 0.955056
60 2NE 0.776978 0.955556
61 CIC 0.776978 0.977273
62 FAM 0.772727 0.933333
63 4CA 0.768116 0.944444
64 HAX 0.766917 0.933333
65 1CV 0.760563 1
66 WCA 0.760563 0.955556
67 0FQ 0.758865 0.955056
68 4CO 0.758865 0.944444
69 CAJ 0.757353 0.955056
70 CA6 0.755556 0.867347
71 4KX 0.755245 0.945055
72 01A 0.753521 0.913979
73 MRR 0.75 0.955556
74 MRS 0.75 0.955556
75 NMX 0.75 0.884211
76 DAK 0.744828 0.945055
77 0ET 0.741259 0.934066
78 8Z2 0.739726 0.945055
79 CCQ 0.739437 0.934783
80 S0N 0.739437 0.955056
81 YE1 0.733813 0.94382
82 NHM 0.731034 0.934066
83 NHW 0.731034 0.934066
84 UOQ 0.731034 0.934066
85 UCA 0.729032 0.955556
86 HFQ 0.726027 0.934066
87 CA8 0.723404 0.886598
88 F8G 0.721854 0.935484
89 1HA 0.72 0.955556
90 NHQ 0.718121 0.965909
91 COT 0.710526 0.955056
92 01K 0.703947 0.955056
93 7L1 0.70073 0.966292
94 CA3 0.690323 0.955056
95 CA5 0.679245 0.913979
96 CO7 0.673611 0.977273
97 93P 0.664596 0.966292
98 93M 0.654545 0.966292
99 COD 0.651852 0.965517
100 PLM COA 0.638158 0.923077
101 COA PLM 0.638158 0.923077
102 HMG 0.625 0.965909
103 5TW 0.617143 0.914894
104 4BN 0.617143 0.914894
105 OXT 0.614943 0.914894
106 JBT 0.6 0.915789
107 BSJ 0.585227 0.945055
108 ASP ASP ASP ILE CMC NH2 0.558824 0.933333
109 191 0.544872 0.867347
110 PAP 0.540323 0.793103
111 SFC 0.505952 0.955556
112 RFC 0.505952 0.955556
113 PPS 0.503876 0.736842
114 ACE SER ASP ALY THR NH2 COA 0.497326 0.933333
115 A3P 0.491935 0.781609
116 0WD 0.476821 0.771739
117 PTJ 0.43662 0.873563
118 3AM 0.432 0.770115
119 SAP 0.425373 0.808989
120 AGS 0.425373 0.808989
121 PUA 0.425 0.802198
122 A22 0.42446 0.795455
123 A2D 0.418605 0.784091
124 PAJ 0.41844 0.885057
125 3OD 0.416667 0.827586
126 ATR 0.414815 0.781609
127 NA7 0.412587 0.83908
128 BA3 0.412214 0.784091
129 HEJ 0.410448 0.804598
130 ATP 0.410448 0.804598
131 AP5 0.409091 0.784091
132 B4P 0.409091 0.784091
133 ADP 0.409091 0.804598
134 48N 0.407895 0.811111
135 5FA 0.407407 0.804598
136 AQP 0.407407 0.804598
137 A2R 0.407143 0.816092
138 NJP 0.405063 0.788889
139 OAD 0.402778 0.827586
140 WAQ 0.4 0.862069
Similar Binding Sites (Proteins are less than 50% similar to leader)
Pocket No.: 1; Query (leader) PDB : 3FSY; Ligand: SCA; Similar sites found with APoc: 294
This union binding pocket(no: 1) in the query (biounit: 3fsy.bio1) has 10 residues
No: Leader PDB Ligand Sequence Similarity
1 5U6C 7YS 0.634921
2 3X01 AMP 0.903614
3 3AKK ADP 0.923077
4 1KRH FAD 1.20482
5 2V58 LZJ 1.50602
6 2PYW ADP 1.50602
7 3L8G GMB 1.60428
8 5MJA 7O3 1.63934
9 4QJK COA 1.70213
10 4ZV1 ARG 1.71674
11 3VRY B43 1.80723
12 1VBJ NAP 1.80723
13 3O9P MHI 1.80723
14 2HGS ADP 1.80723
15 3PN1 IVH 1.88679
16 4KWI NAP 1.90114
17 1JPA ANP 1.92308
18 1I7L ATP 1.94175
19 5DEY 59T 2.0202
20 5O96 SAM 2.04082
21 3PE2 E1B 2.10843
22 1H82 GZZ 2.10843
23 2WTX VDO 2.10843
24 2WTX UDP 2.10843
25 3DLS ADP 2.10843
26 5ZEC NAP 2.10843
27 1S1D GP2 2.1148
28 4D42 NAP 2.12766
29 4D42 W0I 2.12766
30 2Q37 3AL 2.20994
31 2HK5 1BM 2.22222
32 2VZ6 FEF 2.23642
33 2C49 ADN 2.31788
34 1ZAP A70 2.33918
35 5JR6 01B PRO PRO ALA NH2 2.40964
36 2YAB AMP 2.40964
37 4CTA ATP 2.40964
38 4UUW AMP 2.40964
39 4ZEV M6P 2.40964
40 2CXS F6P 2.40964
41 2O2C G6Q 2.40964
42 1N07 ADP 2.45399
43 1N07 FMN 2.45399
44 4JEJ 1GP 2.45902
45 1YOA FAD 2.51572
46 5GWT NAD 2.51799
47 5GWT SIN 2.51799
48 4H6Q FAD 2.5641
49 4H6Q TFB 2.5641
50 5AGR A52 2.58621
51 4XDA ADP 2.589
52 5H2U 1N1 2.62172
53 5CG1 NAD BBN 2.62295
54 5CC2 CKA 2.64151
55 3O7J 2AL 2.6455
56 3NYQ MCA 2.71084
57 3NYQ AMP 2.71084
58 1OZH HE3 2.71084
59 4IJR NDP 2.71084
60 5EY9 5SV 2.71084
61 2E3N 6CM 2.71084
62 4OHU 2TK 2.76817
63 4OHU NAD 2.76817
64 3N26 ARG 2.84553
65 1KQN NAD 2.86738
66 1KZL CRM 2.88462
67 4D79 ATP 2.89855
68 2PD4 NAD 2.90909
69 2PD4 DCN 2.90909
70 3X1Z GNP 2.99401
71 1ZX5 LFR 3
72 3AB1 FAD 3.01205
73 3PP0 03Q 3.01205
74 5ERR ADP 3.01205
75 3O3R NAP 3.01205
76 1XHL NDP 3.0303
77 1CKM GTP 3.0303
78 3OCZ SRA 3.05344
79 1H5T DAU 3.07167
80 1R18 SAH 3.0837
81 1I1N SAH 3.09735
82 3BP1 GUN 3.10345
83 4FG8 ATP 3.1746
84 4C2C ALA VAL PRO ALA 3.31325
85 5AOV NAP 3.31325
86 4LX0 BEF GDP 3.31325
87 3ORQ ADP 3.31325
88 4USF 6UI 3.31325
89 1NB9 ADP 3.40136
90 1NB9 RBF 3.40136
91 4CC6 L5Y 3.45912
92 6FA4 GNP 3.46821
93 4J7U YTZ 3.47222
94 4J7U NAP 3.47222
95 3CRZ NAP 3.50195
96 1Z6Z NAP 3.5461
97 3ZZH NLG 3.58306
98 1V2X SAM 3.60825
99 5BSR COA 3.61446
100 4ZG4 VO4 ADP 3.61446
101 3KAL ADP 3.61446
102 4J1Q NDP 3.61446
103 4L2I NAD 3.61446
104 4QVH COA 3.61446
105 4OCV ANP 3.61446
106 4I4Z 2NE 3.63636
107 3SBD GNP 3.74332
108 1TMX HGX 3.75427
109 3RWO GDP 3.78378
110 3VV5 SLZ 3.84615
111 1QK3 5GP 3.86266
112 6GBC AMP 3.91566
113 1EZ0 NAP 3.91566
114 2Y6O 1N1 3.91566
115 3GE7 AFQ 3.91566
116 3KXW 1ZZ 3.91566
117 4HAT GNP 3.91566
118 3E5H GNP 3.93258
119 5UBG PRT 3.9823
120 6GIN IR2 3.98671
121 2PFY PCA 3.98671
122 2CB3 MLD 4
123 4XBA GMP 4
124 4XBA 5GP 4
125 5K8P 6R8 4
126 2C43 COA 4.02477
127 3F5O UOC COA 4.05405
128 4XTX 590 4.07407
129 5UWO GNP 4.1958
130 5UWH GNP 4.1958
131 5DI9 GNP 4.1958
132 5UWT GNP 4.1958
133 5UWI GNP 4.1958
134 5DHF GNP 4.1958
135 5UWJ GNP 4.1958
136 5UWQ GNP 4.1958
137 5UWU GNP 4.1958
138 5UWW GNP 4.1958
139 4FL3 ANP 4.21687
140 3TW1 AHN 4.21941
141 1WDN GLN 4.42478
142 5XKT GNP 4.5
143 5KVS NAP 4.51807
144 4HXY NDP 4.51807
145 4UXL 5P8 4.51807
146 3SLS ANP 4.51807
147 4I42 1HA 4.5614
148 3U2U UDP 4.56274
149 4DQ2 BTX 4.57317
150 5KO1 6UY 4.59364
151 3GFS FMN 4.5977
152 2A92 NAI 4.6729
153 1EZ4 NAD 4.71698
154 4M69 ANP 4.79233
155 2CFM AMP 4.81928
156 4RIF 3R2 4.81928
157 5W19 9TD 4.81928
158 6H1U ASP 4.87805
159 1UPR 4IP 4.87805
160 1U7T NAD 4.98084
161 3VPD ANP 4.98221
162 5BJX NAD 5.12048
163 5BJX UDP 5.12048
164 3TN7 NJP 5.12048
165 5BRE 4UZ 5.12048
166 4CQM NAP 5.32787
167 2BD0 NAP 5.32787
168 2II3 CAO 5.34351
169 1PK8 ATP 5.42169
170 4FF8 14S 5.42169
171 1ZHX HC3 5.42169
172 3TO3 ATP 5.42169
173 2IV2 2MD 5.42169
174 4RGQ 13P 5.70652
175 4D57 ARG AMP 5.72289
176 2V0C ANZ 5.72289
177 4DEC UDP 5.72289
178 4DEC 3PG 5.72289
179 4HY1 19X 5.72289
180 4CQE CQE 5.7554
181 4OJ8 2TQ 5.80205
182 4OJ8 AKG 5.80205
183 5TVA COA 5.83333
184 2GQS ADP 5.90717
185 2C5L GTP 5.98291
186 4CM8 NAP 6.0241
187 4CLO NAP 6.0241
188 3JQB NAP 6.0241
189 3BMN NAP 6.0241
190 5JDI NAP 6.0241
191 4CM4 NAP 6.0241
192 5JCJ NAP 6.0241
193 2WD7 NAP 6.0241
194 4CME NAP 6.0241
195 3JQ7 NAP 6.0241
196 3JQ9 NAP 6.0241
197 5JDC NAP 6.0241
198 4CLR NAP 6.0241
199 3BMO NAP 6.0241
200 3JQA NAP 6.0241
201 2VZ0 D64 6.0241
202 2VZ0 NAP 6.0241
203 5K6A NAP 6.0241
204 3JQ8 NAP 6.0241
205 4CMI NAP 6.0241
206 3JQF NAP 6.0241
207 3BMQ NAP 6.0241
208 3JQG NAP 6.0241
209 3GL0 HXX 6.0241
210 4CM9 NAP 6.0241
211 2NNQ T4B 6.10687
212 4FE2 ADP 6.27451
213 3LZW NAP 6.3253
214 3LZW FAD 6.3253
215 5FAL COA 6.3253
216 5FAL SKT 6.3253
217 1AUX AGS 6.3253
218 5WL1 D3D 6.33333
219 5WL1 CUY 6.33333
220 2FTB OLA 6.4
221 2JAH NDP 6.47773
222 2PA4 UPG 6.50155
223 2BKK ADP 6.50888
224 1OBD ATP 6.53595
225 5VZ0 ADP 6.92771
226 1PG4 PRX 6.92771
227 1PG4 COA 6.92771
228 1LDN NAD 6.92771
229 5K2M ADP 6.95971
230 2OFV 242 7.22892
231 4IKR PVP 7.29483
232 3AB4 THR 7.30337
233 1V35 NAI 7.53012
234 3LOO B4P 7.53012
235 2E5V FAD 7.53012
236 5Z2M GTP 7.53012
237 1VG8 GNP 7.53012
238 1UWK URO 7.53012
239 1UWK NAD 7.53012
240 5TSH ANP 7.53012
241 6GAS FAD 7.55287
242 2FWP CIT 7.65027
243 2FWP ICR 7.65027
244 3EFS ATP 7.72532
245 1B8O IMH 7.74648
246 1XKQ NDP 7.83133
247 5OES ADP 8.13253
248 2Q2V NAD 8.23529
249 1XG5 NAP 8.43373
250 4KVG GTP 8.46154
251 1FK8 NAD 8.56031
252 1BH2 GSP 8.57143
253 1T36 U 8.73494
254 1NMB NAG NAG BMA MAN MAN MAN MAN 9.01639
255 2VPQ ANP 9.09091
256 2B3D FAD 9.31373
257 4YBN FAD 9.375
258 4Q9N NAI 9.39597
259 1NNU TCT 9.60699
260 1NNU NAD 9.60699
261 4IX4 ADP 9.63855
262 1WA5 GTP 9.63855
263 1Q0S SAH 9.65251
264 1HSL HIS 9.66387
265 1GS5 ANP 10.0775
266 1GS5 NLG 10.0775
267 4NAT ADP 10.241
268 4HDO GNP 10.241
269 4BGB ADP 10.4615
270 3QXV MTX 11.1111
271 3VPB ADP 12.3494
272 3VPC ADP 12.3494
273 5ZCT ANP 13.253
274 6BYF CIT 13.5294
275 6C99 EQY 13.5542
276 1LAF ARG 14.2857
277 5DIF GNP 15.7895
278 6D5M GNP 15.9639
279 6D55 GNP 15.9639
280 6D5G GNP 15.9639
281 6D5J GNP 15.9639
282 1NVV GNP 15.9639
283 6BVJ GNP 15.9639
284 6BVM GNP 15.9639
285 6D5L GNP 15.9639
286 6BVL GNP 15.9639
287 6BVI GNP 15.9639
288 6D5V GNP 15.9639
289 6D59 GNP 15.9639
290 6D5E GNP 15.9639
291 6D56 GNP 15.9639
292 6BVK GNP 15.9639
293 1NBU PH2 15.9664
294 1IR3 ANP 27.7778
Pocket No.: 2; Query (leader) PDB : 3FSY; Ligand: SCA; Similar sites found with APoc: 570
This union binding pocket(no: 2) in the query (biounit: 3fsy.bio1) has 8 residues
No: Leader PDB Ligand Sequence Similarity
1 6E8I PTR None
2 1U9L ASN ARG PRO ILE LEU SER LEU None
3 1SVK ALF GDP 0.903614
4 1IY8 NAD 1.1236
5 4G17 0VN 1.21212
6 3LCC SAH 1.2766
7 2PXX SAH 1.39535
8 4A4X JUP 1.43369
9 8CAT NDP 1.50602
10 4OCJ NDG 1.50602
11 2PUL ACP 1.50602
12 3C0G 3AM 1.50602
13 4DFU QUE 1.5528
14 6CGD GNP 1.63934
15 6CGD AKN 1.63934
16 5J62 FMN 1.80723
17 5IBE 69M 1.80723
18 2VQD AP2 1.80723
19 2F2U M77 1.80723
20 3V8S 0HD 1.80723
21 5VC5 96M 1.80723
22 3TKY SAH 1.80723
23 5O42 BGC 1.82482
24 5O42 9JW 1.82482
25 5O42 NAD 1.82482
26 3AY6 NAI 1.85874
27 3AY6 BGC 1.85874
28 6ES0 BW8 1.89274
29 4KWI 1TJ 1.90114
30 1GEE NAD 1.91571
31 3OJF IMJ 1.94553
32 3OJF NDP 1.94553
33 2JAQ DCP 1.95122
34 3WCS MAN NAG GAL 1.9685
35 5X9D 80F 1.97368
36 1W8D NAP 1.98676
37 1W73 NAP 1.98676
38 1W6U NAP 1.98676
39 5BSZ SAH 2
40 1D7O NAD 2.0202
41 1D7O TCL 2.0202
42 1SQL GUN 2.05479
43 2AQX ATP 2.07612
44 4NBT NAD 2.08333
45 5OGX FAD 2.10843
46 3UDZ ADP 2.10843
47 6FL8 TIY 2.10843
48 6FL8 ADP 2.10843
49 5JJR SAH 2.10843
50 5NMX NAP 2.10843
51 5XNC MTA 2.10843
52 6BCB GSP 2.10843
53 6BCA GSP 2.10843
54 1OFD AKG 2.10843
55 1OFD FMN 2.10843
56 5NMX FAD 2.10843
57 3WMX NAD 2.10843
58 5ENZ UDP 2.10843
59 5MPT SAH 2.10843
60 3BEO UDP 2.10843
61 1RJD SAM 2.10843
62 4LOO SB4 2.10843
63 1VL0 NAI 2.10843
64 2GCO GNP 2.10843
65 5YJF SAH 2.11268
66 5YJF 8WO 2.11268
67 5YJI 8WO 2.11268
68 5YJI SAH 2.11268
69 5HCY 60D 2.1148
70 3KO8 NAD 2.24359
71 3RFV 15L 2.24719
72 5E2N V14 2.28137
73 1IOW ADP 2.28758
74 1IOW PHY 2.28758
75 1SG4 CO8 2.30769
76 3KCC CMP 2.30769
77 4ZA2 NAD 2.37154
78 2AKO ADP 2.39044
79 1GP6 SIN 2.40964
80 1GP6 DH2 2.40964
81 1GP6 QUE 2.40964
82 2JHP SAH 2.40964
83 1I8T FAD 2.40964
84 3T7V SAM 2.40964
85 1N7G NDP 2.40964
86 5ZTN CUR 2.40964
87 6AU6 GDP 2.40964
88 4P5Z Q7M 2.40964
89 5WA0 MSS 2.40964
90 5WP5 SAH 2.40964
91 4EJN 0R4 2.40964
92 1ST0 GTG 2.40964
93 5UR0 NAD 2.40964
94 6A5K SAM 2.40964
95 5W7R 9Z7 2.40964
96 5YK1 ANP 2.40964
97 2FB3 5AD 2.40964
98 2FB3 MET 2.40964
99 4I9B NAD 2.40964
100 5WP4 SAH 2.40964
101 5W7R SAH 2.40964
102 5T2U NAP 2.41935
103 5JGL SAM 2.42215
104 5CJF 520 2.50896
105 4NDO ATP 2.53623
106 1MXH NAP 2.53623
107 1MXH DHF 2.53623
108 5W7M SAH 2.5641
109 1BC5 SAH 2.60223
110 1VL8 NAP 2.62172
111 1ZPT FAD 2.63158
112 2J7T 274 2.64901
113 1FWM CB3 2.65152
114 2A14 SAH 2.6616
115 2XOC ADP 2.68199
116 1E5Q NDP 2.71084
117 5MW8 ATP 2.71084
118 1Y57 MPZ 2.71084
119 4GLL NAD 2.71084
120 1OPK P16 2.71084
121 3V4S ATP 2.71084
122 4D04 FAD 2.71084
123 4D04 NAP 2.71084
124 3A4V NAD 2.71084
125 3A4V PYR 2.71084
126 6AC9 ANP 2.71084
127 4PZ6 GMP 2.71084
128 2VDV SAM 2.71084
129 5CK5 GDP 2.71084
130 3S2U UD1 2.71084
131 2H8H H8H 2.71084
132 3TY5 ADP 2.71084
133 4I53 1C1 2.71084
134 3O7W SAM 2.72109
135 5DBX ANP 2.7439
136 1XA4 COA 2.746
137 5FEU NAP 2.74914
138 3G5D 1N1 2.7972
139 3LKZ SFG 2.80374
140 3VX3 ADP 2.82258
141 5VW2 FDA 2.8481
142 5VW2 NAP 2.8481
143 5OKT 9XK 2.86624
144 4FC7 COA 2.88809
145 4FC7 NAP 2.88809
146 3EVF SAH 2.88809
147 1TZD ADP 2.90909
148 2FFQ GSP 2.92398
149 1AE1 NAP 2.9304
150 2X9L BOG 2.9304
151 4TWP AXI 2.95203
152 4V0K GDP 2.95858
153 5CUQ NSC 2.99625
154 4ZDC CO8 3
155 2R3A SAM 3
156 2XTZ GSP 3.01205
157 5AB7 MLC 3.01205
158 5TA6 79D 3.01205
159 3FC2 IBI 3.01205
160 3WO0 ALA 3.01205
161 3WO0 ADP 3.01205
162 4NMC FAD 3.01205
163 4NMC 2OP 3.01205
164 5OA6 9PT 3.01205
165 4IE6 UN9 3.01205
166 1IA9 ANP 3.01205
167 1QG6 NAD 3.06513
168 1QG6 TCL 3.06513
169 2AE2 PTO 3.07692
170 2AE2 NAP 3.07692
171 5FFF NAP 3.11284
172 5FFF 5XC 3.11284
173 1E7S NAP 3.11526
174 1N5D NDP 3.125
175 1GEG NAD 3.125
176 5FTW SAH 3.125
177 5OCG GNP 3.1746
178 4U0I 0LI 3.1746
179 1ZK4 NAP 3.18725
180 1ZK4 AC0 3.18725
181 3LCV SAM 3.20285
182 3BF1 ADP 3.21285
183 3BF1 PAU 3.21285
184 1IBR GNP 3.24074
185 2VSU ACO 3.26087
186 2VSS ACO 3.26087
187 4MO2 FDA 3.31325
188 4MO2 FAD 3.31325
189 4EUE NAI 3.31325
190 1ON3 MCA 3.31325
191 2AG5 NAD 3.31325
192 4Y93 746 3.31325
193 4IZY 1J2 3.31325
194 6EPY RAF 3.31325
195 4TM3 FAD 3.31325
196 2OI2 DP6 3.31325
197 1Z06 GNP 3.31325
198 2GK6 ADP 3.31325
199 6FYL 3NG 3.31325
200 2YW2 ATP 3.31325
201 4X17 SIA SIA 3.31325
202 2A0S BIO 3.33333
203 4ITU NAI 3.34572
204 4ITU 1HS 3.34572
205 3LL9 ADP 3.34572
206 5ULP KB1 3.35821
207 4YAC NAI 3.367
208 1S8F GDP 3.38983
209 6CZ3 FLJ 3.40909
210 4LHW GNP 3.44828
211 3CRZ FAD 3.50195
212 4K81 GTP 3.50877
213 3ICC NAP 3.52941
214 2J4K U5P 3.53982
215 1U7Z PMT 3.53982
216 2WSB NAD 3.54331
217 1Z82 NDP 3.58209
218 4B7H NDP 3.61446
219 5Z2L NDP 3.61446
220 1RLZ NAD 3.61446
221 2FR1 NDP 3.61446
222 2DTX BMA 3.61446
223 5CEO 50D 3.61446
224 6CQF F97 3.61446
225 1XKV ATP 3.61446
226 3CV9 VDX 3.61446
227 4LHD GLY 3.61446
228 2XVD AS6 3.64238
229 1E96 GTP 3.64583
230 5OVL NAP 3.66667
231 3OU2 SAH 3.66972
232 2G37 FAD 3.66972
233 4AT3 LTI 3.67893
234 1NML CIT 3.68098
235 3TAY MN0 3.68098
236 1U3G THF 3.7037
237 2PX8 SAH 3.71747
238 4N9I PCG 3.80952
239 1EP2 FAD 3.85852
240 5O4F 8VE 3.87597
241 5AVF TAU 3.89105
242 5GXU FAD 3.91566
243 2PAR TMP 3.91566
244 4URF NAD 3.91566
245 5FBN 5WF 3.91566
246 3FHR P4O 3.91566
247 3KLL MAL 3.91566
248 5K7U SAM 3.91566
249 5IL1 SAM 3.91566
250 2GDZ NAD 3.91566
251 2C5A NAD 3.91566
252 2C5A GDC 3.91566
253 5THZ SAH 3.91566
254 1MH1 GNP 3.91566
255 3WYF GTP 3.91566
256 3WXM GTP 3.91566
257 3GCZ SAM 3.91566
258 3M1I GTP 3.91566
259 5THY SAH 3.91566
260 1ZCB GDP 3.91566
261 3AB3 GDP 3.91566
262 1O3Y GTP 3.91566
263 1YXM ADE 3.9604
264 5Z75 NAD 3.97554
265 1UNQ 4IP 4
266 3LL5 ATP 4.01606
267 3LL5 ADP 4.01606
268 3LL5 IPE 4.01606
269 4BAS GNP 4.0201
270 2XVM SAH 4.0201
271 4G7A AZM 4.03226
272 5GM1 SAH 4.0404
273 2V2V V12 4.05904
274 5F1H 5U6 4.06504
275 5O98 NAP 4.10095
276 1UAY ADN 4.13223
277 4JGP PYR 4.14747
278 3MMG GLU THR VAL ARG PHE GLN SER ASP 4.14938
279 2YY7 NAD 4.16667
280 4NEC SAH 4.16667
281 3H4V NAP 4.16667
282 3H4V DVP 4.16667
283 4QVX 3CQ 4.19162
284 5UWP GNP 4.1958
285 6CIT GNP 4.1958
286 4O4F IHP 4.21687
287 4O4F ATP 4.21687
288 3TTI KBI 4.21687
289 5I7S NAD 4.21687
290 5I7S E9P 4.21687
291 1VEM GLC GLC 4.21687
292 3VOT ADP 4.21687
293 4K37 SAM 4.21687
294 1KMQ GNP 4.21687
295 2WOX NDP 4.21687
296 1T90 NAD 4.21687
297 4LWA Q13 4.21687
298 1TX4 ALF GDP 4.21687
299 2WME NAP 4.21687
300 4I6H 1C8 4.22078
301 5NKB 8ZT 4.24837
302 5DY5 5GR 4.27632
303 5OVK NDP 4.29688
304 5YSS NAD 4.29688
305 5M42 FMN 4.30108
306 5KBF CMP 4.31894
307 3HAV ATP 4.34783
308 3AQ4 GDP 4.34783
309 1CXZ GSP 4.3956
310 3ZLR X0B 4.43038
311 1DMY AZM 4.43548
312 4XOI GTP 4.44444
313 4PW9 MSS 4.51807
314 2WU6 DKI 4.51807
315 1AJ8 COA 4.51807
316 3TPV ADE 4.51807
317 3E8N ATP 4.51807
318 3E8N VRA 4.51807
319 4H3P ANP 4.51807
320 3DNT ATP 4.51807
321 2NP9 YE1 4.51807
322 4KS7 X4Z 4.51807
323 3GU3 SAH 4.51807
324 3CZ7 ACO 4.51807
325 1H5Q NAP 4.5283
326 5WUW NAP 4.52962
327 5KOK S9T 4.53401
328 5KOK SAH 4.53401
329 5KOK R9T 4.53401
330 6D6Y SAH 4.58891
331 4WUP 3UF 4.61538
332 2ZX2 RAM 4.61538
333 3REF GDP 4.63918
334 1OIX GDP 4.71204
335 3FRH SAH 4.74308
336 2ZL7 FUC GAL NGA 4.74576
337 6ECW SAH 4.7619
338 4NVP 7CH 4.78469
339 1ZEA DVA DPR GLY DSN DGN DHI DTY DAS DSN 4.81928
340 4BTV RB3 4.81928
341 2BSA FAD 4.81928
342 2BSA NAP 4.81928
343 6FDF SAH 4.81928
344 3ZRM ZRM 4.81928
345 3H8V ATP 4.81928
346 5GT9 NAP 4.81928
347 5KAX RHQ 4.81928
348 1S68 AMP 4.81928
349 4X5S AZM 4.81928
350 2OBF F83 4.84429
351 2OBF SAH 4.84429
352 5GQI CTP 4.8583
353 1SNY NAP 4.86891
354 4HVA 4HV 4.90566
355 1ZEM NAD 4.96183
356 1PUJ GNP 4.96454
357 1U7T TDT 4.98084
358 4XSH GSP 5.02283
359 6BSX E7S 5.05618
360 6BSX GDP 5.05618
361 3E3U NVC 5.07614
362 4CNG SAH 5.09804
363 1NFQ NAI 5.12048
364 3VHE 42Q 5.12048
365 1FQ5 0GM 5.12048
366 3GJX GTP 5.12048
367 4ASE AV9 5.12048
368 4WW8 VD9 5.12048
369 3W0O ADP 5.12048
370 3W0O HY0 5.12048
371 2IO8 ADP 5.12048
372 3DAK ANP 5.17241
373 6GQM F8H 5.18293
374 1GPJ CIT 5.19802
375 4YLG GDP 5.20231
376 1UZN NAP 5.26316
377 5UQW GDP 5.29101
378 5K4W NAI 5.29595
379 5K4W THR 5.29595
380 4PNE SAH 5.29801
381 3RKR NAP 5.34351
382 3WXB NDP 5.37634
383 2RH4 EMO 5.41516
384 5BN3 ADP 5.42169
385 4I54 1C1 5.42169
386 5C3R AKG 5.42169
387 5C3R HMU 5.42169
388 3V1U NAD 5.42169
389 5JBX COA 5.42169
390 3NK7 SAM 5.42169
391 4KIB SAH 5.42169
392 5H5O PCG 5.42636
393 6H36 FKE 5.47445
394 3HB5 NAP 5.50459
395 5HTL C2E 5.51724
396 3SJ7 NDP 5.55556
397 4YGF AZM 5.55556
398 5FQD LVY 5.57185
399 5UIU 8CG 5.57276
400 4QED NAP 5.64516
401 5JE0 SAH 5.66802
402 5JE0 AZ8 5.66802
403 5XLY C2E 5.69395
404 4Y8D 49J 5.71429
405 1ZC3 GNP 5.71429
406 5RHN 8BR 5.72289
407 3SXS PP2 5.72289
408 5USZ SKE 5.72289
409 3OTI TYD 5.72289
410 4DC2 ADE 5.72289
411 1L3I SAH 5.72917
412 3SJU NDP 5.73477
413 1WMA NDP 5.7971
414 1WMA AB3 5.7971
415 5L53 NAP 5.8642
416 5O2Z FLC 5.88235
417 4FN4 NAD 5.90551
418 2GQR ADP 5.90717
419 6ECU SAH 6.0241
420 2DJH 3PD UM3 6.08696
421 1EJ0 SAM 6.11111
422 3ALN ANP 6.11621
423 2WYV NAD 6.13027
424 4DVR 0LY 6.13208
425 1FQK ALF 6.15385
426 1FQK GDP 6.15385
427 1TAD GDP 6.17284
428 1TAD ALF 6.17284
429 3N5C GDP 6.17284
430 6CI9 NAP 6.17761
431 1JA9 NDP 6.20438
432 5XLS URA 6.2069
433 1A27 NAP 6.22837
434 1NF3 GNP 6.25
435 3NKV GNP 6.28571
436 4QIJ 1HA 6.28743
437 3CX8 GSP 6.3253
438 6EJI UD2 6.3253
439 6GKV SAH 6.3253
440 3QOX SAH 6.3253
441 4U44 3D9 6.3253
442 4CS9 AMP 6.34921
443 1ZJ6 G3D 6.41711
444 1LSS NAD 6.42857
445 3OCP CMP 6.47482
446 3NUG NAD 6.47773
447 2JAP NDP 6.47773
448 4COQ SAN 6.47773
449 2ZEJ GDP 6.52174
450 3O03 NAP 6.52921
451 4RFM 3P6 6.62651
452 2QFY AKG 6.62651
453 5QIN J2V 6.64557
454 5H4S RAM 6.69014
455 3OIG NAD 6.76692
456 2P41 SAH 6.88525
457 1V7Z CRN 6.92308
458 5EXT ADP 6.92308
459 4YS0 ADP 6.92771
460 3A4T SFG 6.93431
461 3FPF MTA 7.04698
462 3FPF TNA 7.04698
463 1W2D ADP 7.16981
464 1W2D 4IP 7.16981
465 4B63 FAD 7.22892
466 4B63 ORN 7.22892
467 4B63 NAP 7.22892
468 5Y86 HRM 7.22892
469 3OZV ECN 7.22892
470 3OZV FAD 7.22892
471 5LOG SAH 7.29614
472 3H9R TAK 7.33945
473 3A28 NAD 7.36434
474 5W7K SAH 7.37179
475 3S6X SIA GAL BGC 7.38462
476 5AX9 4KT 7.46753
477 3RJ5 NAD 7.53012
478 2UYQ SAM 7.53012
479 1HK8 DGT 7.53012
480 3ZS7 ATP 7.53012
481 5TEF GTG 7.53012
482 1SVM ATP 7.53012
483 4FDU IHS 7.53012
484 3EVG SAH 7.63636
485 4INI AMP 7.69231
486 2FSH ANP 7.83133
487 2PZI AXX 7.83133
488 3MB5 SAM 7.84314
489 2IF8 ADP 8.13253
490 4AZW ATP 8.13253
491 4U31 MVP 8.13253
492 1GP2 GDP 8.13253
493 1EDO NAP 8.19672
494 5UPK GNP 8.33333
495 4FGC PQ0 8.43373
496 4Y9D NAI 8.52459
497 1U29 I3P 8.52713
498 5O2T GSP 8.55615
499 3VZS NAP 8.56031
500 4Q5H ANP 8.62069
501 1XFF GLU 8.75
502 4K4D HFQ 8.75912
503 1SJN DUP 8.82353
504 5THQ NDP 8.82353
505 2W2X GSP 8.87097
506 1YZG GDP 8.93855
507 4IPH 1FJ 8.94309
508 2HMT NAI 9.02778
509 4CLI 5P8 9.03614
510 5BV3 M7G 9.03614
511 3KMW ATP 9.30233
512 5G4J EXT 9.33735
513 5VFC 9BA 9.33735
514 2RIF AMP 9.33735
515 5L4S 6KX 9.43396
516 5L4S NAP 9.43396
517 4EWH T77 9.45455
518 1FQJ ALF 9.52381
519 1FQJ GDP 9.52381
520 1X1T NAD 9.61539
521 2XG9 NOJ GLC 9.63855
522 3O26 NDP 9.6463
523 1LCK GLU GLY GLN PTR GLN PRO GLN PRO ALA 9.93976
524 1ME8 RVP 9.93976
525 1O44 852 10.1852
526 1GWN GTP 10.2439
527 4NBW NAD 10.5422
528 4PU5 ANP 10.5422
529 5OFI 9TQ 10.6557
530 2CFC NAD 10.8
531 3HAZ FAD 10.8434
532 3AFN NAP 10.8434
533 5TVI O8N 10.8696
534 6ECT SAM 10.9034
535 1UAD GNP 11.1111
536 5UWR GNP 11.1111
537 1M7B GTP 11.413
538 2Q4H AMP 11.4458
539 5JLB SAH 11.4695
540 5FP3 3JI 11.747
541 1E3W NAD 11.8774
542 1E6W NAD 11.9231
543 2PK3 A2R 12.0482
544 2EWM NAD 12.0482
545 2DKN NAI 12.1569
546 3GDH SAH 12.4481
547 5L95 AMP 12.5
548 5FDZ 5X0 12.605
549 3QWI NAP 12.9518
550 3QWI CUE 12.9518
551 3N1S 5GP 13.4454
552 5B4T 3HR 14.2308
553 5B4T NAD 14.2308
554 1AV5 AP2 14.4578
555 5WA9 9ZD 14.4578
556 3I59 N6S 14.4578
557 1GUA GNP 14.8148
558 2UZI GTP 14.9123
559 2BGM NAJ 15.8273
560 6D5H GNP 15.9639
561 3QF7 ANP 16
562 3QLM PLM 16.129
563 2WAT COA 16.3934
564 5HPZ 68G 17.3184
565 1Q7B NAP 18.0328
566 4NBU NAI 20.4
567 3R5J ACE ALA ASP VAL ALA ASA 20.5357
568 3MJH GTP 20.5882
569 1Z0J GTP 32.2034
570 4K38 SAM 44.4444
Pocket No.: 3; Query (leader) PDB : 3FSY; Ligand: SCA; Similar sites found with APoc: 49
This union binding pocket(no: 3) in the query (biounit: 3fsy.bio1) has 27 residues
No: Leader PDB Ligand Sequence Similarity
1 1RV1 IMZ None
2 6F5W KG1 2.10843
3 2A9W GA9 2.65152
4 1NJJ GET 2.71084
5 4KBA 1QM 2.71903
6 4XW2 SIM 3.0303
7 4XH0 ADP 3.31325
8 5AZC PGT 3.33333
9 1Y7I SAL 3.35821
10 3P13 RIP 3.47222
11 5GZK BGC 3.61446
12 3R4S SLB 3.61446
13 5KJW 53C 3.61446
14 2EB5 OXL 3.61446
15 6GNO XDI 3.91566
16 4URF 1PS 3.91566
17 2J0W ASP 3.91566
18 3NW7 LGV 4.51807
19 3I3X U22 5.01931
20 3H0L ADP 5.31915
21 1F9V ADP 5.42169
22 5A0U CHT 5.42169
23 5HZ9 5M8 5.92593
24 1M26 GAL A2G 6.01504
25 3JQA DX4 6.0241
26 4CLR FDB 6.0241
27 3JQF AX2 6.0241
28 5EXK MET 6.62651
29 2IU8 PLM 6.92771
30 4MZU COA 7.05128
31 3C3D FO1 7.07396
32 4R98 GNH 7.74908
33 4EA7 COA 7.83133
34 4EA7 JB2 7.83133
35 5L2R MLA 8.60927
36 3MQG ACO 9.03614
37 3MQG U5P 9.03614
38 5T2Y 753 9.09091
39 5FUI APY 9.63855
40 1J2Z SOG 10.5422
41 3VBK COA 13.1707
42 3VBK 0FX 13.1707
43 2WLG SOP 14.4186
44 3TWD GOB 14.4578
45 1HV9 COA 14.4578
46 2WDQ TEO 14.7826
47 3FS8 ACO 15.7509
48 4AAW R84 15.9639
49 1KRR ACO 17.2414
Pocket No.: 4; Query (leader) PDB : 3FSY; Ligand: SCA; Similar sites found with APoc: 8
This union binding pocket(no: 4) in the query (biounit: 3fsy.bio3) has 25 residues
No: Leader PDB Ligand Sequence Similarity
1 4HZD COA 1.77305
2 3UYW TAU 2.33645
3 1EXF GLY 4.81928
4 4PTN GXV 4.81928
5 1SSQ CYS 5.72289
6 2QIA U20 12.9518
7 3FS8 TDR 15.7509
8 6GE9 ACO 17.4699
Pocket No.: 5; Query (leader) PDB : 3FSY; Ligand: SCA; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 5) in the query (biounit: 3fsy.bio3) has 25 residues
No: Leader PDB Ligand Sequence Similarity
Pocket No.: 6; Query (leader) PDB : 3FSY; Ligand: SCA; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 6) in the query (biounit: 3fsy.bio3) has 25 residues
No: Leader PDB Ligand Sequence Similarity
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