Receptor
PDB id Resolution Class Description Source Keywords
3CVP 2 Å NON-ENZYME: SIGNAL_HORMONE STRUCTURE OF PEROXISOMAL TARGETING SIGNAL 1 (PTS1) BINDING D TRYPANOSOMA BRUCEI PEROXIN 5 (TBPEX5)COMPLEXED TO PTS1 PEPTS KL) TRYPANOSOMA BRUCEI TPR MOTIFS TPR PROTEIN PEROXIN 5 PEX5 PTS1 BINDING DOMAIPROTEIN-PEPTIDE COMPLEX RECEPTOR TPR REPEAT TRANSPORT PR
Ref.: STRUCTURAL INSIGHTS INTO THE RECOGNITION OF PEROXIS TARGETING SIGNAL 1 BY TRYPANOSOMA BRUCEI PEROXIN 5. J.MOL.BIOL. V. 381 867 2008
Ligand
Ligand Chain:Residue Validity Ligand Warnings Binding Data NGL Viewer Molecular Weight (Da) Formula SMILES
GLY THR LEU SER ASN ARG ALA SER LYS LEU B:5;
Valid;
none;
submit data
559.665 n/a O=C([...
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90% Homology Family
Leader
PDB id Resolution Class Description Source Keywords
3CV0 2 Å NON-ENZYME: SIGNAL_HORMONE STRUCTURE OF PEROXISOMAL TARGETING SIGNAL 1 (PTS1) BINDING D TRYPANOSOMA BRUCEI PEROXIN 5 (TBPEX5)COMPLEXED TO T. BRUCEIP HOSPHOGLUCOISOMERASE (PGI) PTS1 PEPTIDE TRYPANOSOMA BRUCEI TPR MOTIFS TPR PROTEIN PEROXIN 5 PEX5 PTS1 BINDING DOMAIPROTEIN-PEPTIDE COMPLEX RECEPTOR TPR REPEAT TRANSPORT PR
Ref.: STRUCTURAL INSIGHTS INTO THE RECOGNITION OF PEROXIS TARGETING SIGNAL 1 BY TRYPANOSOMA BRUCEI PEROXIN 5. J.MOL.BIOL. V. 381 867 2008
Members (4)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 289 families.
1 3CV0 - PHE ASN GLU LEU SER HIS LEU n/a n/a
2 3CVL - HIS GLU GLU LEU ALA LYS LEU n/a n/a
3 3CVP - GLY THR LEU SER ASN ARG ALA SER LYS LEU n/a n/a
4 3CVN - ARG ASP ARG ALA ALA LYS LEU n/a n/a
70% Homology Family (4)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 214 families.
1 3CV0 - PHE ASN GLU LEU SER HIS LEU n/a n/a
2 3CVL - HIS GLU GLU LEU ALA LYS LEU n/a n/a
3 3CVP - GLY THR LEU SER ASN ARG ALA SER LYS LEU n/a n/a
4 3CVN - ARG ASP ARG ALA ALA LYS LEU n/a n/a
50% Homology Family (4)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 181 families.
1 3CV0 - PHE ASN GLU LEU SER HIS LEU n/a n/a
2 3CVL - HIS GLU GLU LEU ALA LYS LEU n/a n/a
3 3CVP - GLY THR LEU SER ASN ARG ALA SER LYS LEU n/a n/a
4 3CVN - ARG ASP ARG ALA ALA LYS LEU n/a n/a
Polypharmacology
Similar Ligands (2D)
Ligand no: 1; Ligand: GLY THR LEU SER ASN ARG ALA SER LYS LEU; Similar ligands found: 58
No: Ligand ECFP6 Tc MDL keys Tc
1 GLY THR LEU SER ASN ARG ALA SER LYS LEU 1 1
2 ARG ASP ARG ALA ALA LYS LEU 0.595238 0.764706
3 HIS GLU GLU LEU ALA LYS LEU 0.592593 0.866667
4 TYR GLN SER LYS LEU 0.543478 0.846154
5 PRO LYS THR PRO LYS LYS ALA LYS LYS LEU 0.52 0.822222
6 ALA LYS ALA SER GLN ALA ALA 0.5 0.911111
7 LYS THR LYS LEU LEU 0.494118 0.934783
8 LEU LYS THR LYS LEU LEU 0.482759 0.934783
9 ALA GLU LYS ASP GLU LEU 0.482353 0.869565
10 GLY ALA ASP GLY VAL GLY LYS SER ALA LEU 0.47619 0.916667
11 ALA LYS 0.470588 0.772727
12 ALA LYS GLU LYS SER ASP 0.470588 0.87234
13 ACE VAL LYS GLU SER LEU VAL 0.462366 0.977778
14 GLY LEU TYR ALA SER LYS LEU ALA 0.460784 0.811321
15 PRO LEU SER LYS 0.460674 0.862745
16 SER LEU LEU LYS LYS LEU LEU LEU ALA 0.457831 0.955556
17 ALA LEU 0.453125 0.659091
18 LEU GLU LEU ASP LYS TRP ALA SER LEU 0.45082 0.77193
19 ALA ALA SER LEU TYR GLU LYS LYS ALA ALA 0.449541 0.830189
20 GLY GLY LYS LYS LYS TYR LYS LEU 0.44898 0.740741
21 VAL ARG SER ARG ARG CYS LEU ARG LEU 0.447917 0.811321
22 LEU ALA SER LEU GLU SER GLN SER 0.445652 0.913043
23 SER LEU LEU LYS LYS LEU LEU ASP 0.443182 0.93617
24 LYS LYS LYS ALA 0.441558 0.8
25 GLU LEU ASP LYS TYR ALA SER 0.440367 0.811321
26 PRO PRO LEU ALA SER LYS 0.439252 0.758621
27 SER GLN LEU LYS ASN ASN ALA LYS GLU ILE 0.439252 0.88
28 VAL ARG SER ARG ARG ABA LEU ARG LEU 0.438776 0.811321
29 LYS ASN LEU 0.4375 0.891304
30 LYS LEU LYS 0.435897 0.866667
31 LYS SER LYS 0.434211 0.888889
32 LYS ALA LYS 0.434211 0.8
33 ALA LEU ALA LEU 0.432432 0.727273
34 LEU LYS 0.432432 0.840909
35 GLY GLY LYS LYS LYS TYR GLN LEU 0.428571 0.740741
36 ALA ALA ALA ALA SER ALA ALA 0.426667 0.840909
37 THR LYS THR ALA THR ILE ASN ALA SER 0.423077 0.877551
38 LYS ARG GLU ALA ILE VAL LYS ALA ASP GLU 0.423077 0.851064
39 ACE CSO ARG ALA THR LYS MET LEU 0.421053 0.661538
40 HIS SER LYS LYS LYS CYS ASP GLU LEU 0.421053 0.758621
41 LYS ALA SER VAL GLY 0.420455 0.955556
42 PHE ASN GLU LEU SER HIS LEU 0.42 0.732143
43 ALA ARG LYS LEU ASP 0.419355 0.769231
44 LYS ALA ALA ARG M3L SER ALA 0.419048 0.704918
45 ALA LEU ASP LYS TRP ALA SER 0.417391 0.754386
46 LEU LYS SER MLZ LYS GLY GLN SER THR TYR 0.414894 0.843137
47 ALA LYS ALA ALA 0.4125 0.795455
48 GLY GLY LYS LYS LYS TYR ARG LEU 0.409091 0.666667
49 GLY GLY ARG LYS LYS TYR LYS LEU 0.409091 0.666667
50 GLY GLY LYS LYS ARG TYR LYS LEU 0.409091 0.666667
51 LYS ALA THR LYS MLY 0.406977 0.811321
52 GLU LEU GLU LYS TRP ALA SER 0.40678 0.736842
53 SER LYS SER MLZ ASP ARG LYS TYR THR LEU 0.40625 0.86
54 ACE GLN LEU VAL THR SER LEU 0.404255 0.854167
55 LEU PRO PRO PRO GLU SER GLU SER LYS VAL 0.40404 0.811321
56 ILE LYS ARG SER LYS LYS ASN SER LEU ALA 0.402174 0.784314
57 ASP GLU LEU GLU ILE LYS ALA TYR 0.401709 0.759259
58 SER LEU LYS LEU MET THR THR VAL 0.4 0.88
Similar Ligands (3D)
Ligand no: 1; Ligand: GLY THR LEU SER ASN ARG ALA SER LYS LEU; Similar ligands found: 0
No: Ligand Similarity coefficient
Similar Binding Sites (Proteins are less than 50% similar to leader) APoc FAQ
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