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Receptor
PDB id Resolution Class Description Source Keywords
3CH5 2.1 Å NON-ENZYME: SIGNAL_HORMONE THE CRYSTAL STRUCTURE OF THE RANGDP-NUP153ZNF2 COMPLEX HOMO SAPIENS RANBP2 TYPE C2-C2 ZINC FINGER TRANSPORT PROTEIN
Ref.: THE CRYSTAL STRUCTURE OF THE RAN-NUP153ZNF2 COMPLEX GENERAL RAN DOCKING SITE AT THE NUCLEAR PORE COMPLE STRUCTURE V. 16 1116 2008
Ligand
Ligand Chain:Residue Validity Ligand Warnings Binding Data NGL Viewer Molecular Weight (Da) Formula SMILES
GDP A:220;
Valid;
none;
submit data
443.201 C10 H15 N5 O11 P2 c1nc2...
MG A:221;
Part of Protein;
none;
submit data
24.305 Mg [Mg+2...
SO4 A:222;
Invalid;
none;
submit data
96.063 O4 S [O-]S...
ZN B:800;
Part of Protein;
none;
submit data
65.409 Zn [Zn+2...
View in 3D viewer
90% Homology Family
Leader
PDB id Resolution Class Description Source Keywords
3CH5 2.1 Å NON-ENZYME: SIGNAL_HORMONE THE CRYSTAL STRUCTURE OF THE RANGDP-NUP153ZNF2 COMPLEX HOMO SAPIENS RANBP2 TYPE C2-C2 ZINC FINGER TRANSPORT PROTEIN
Ref.: THE CRYSTAL STRUCTURE OF THE RAN-NUP153ZNF2 COMPLEX GENERAL RAN DOCKING SITE AT THE NUCLEAR PORE COMPLE STRUCTURE V. 16 1116 2008
Members (1)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 286 families.
1 3CH5 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
70% Homology Family (1)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 209 families.
1 3CH5 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
50% Homology Family (3)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 174 families.
1 3CH5 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
2 3GJ3 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
3 3GJ4 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
Polypharmacology
Similar Ligands
Ligand no: 1; Ligand: GDP; Similar ligands found: 161
No: Ligand ECFP6 Tc MDL keys Tc
1 GDP 1 1
2 GTP 0.909091 1
3 GP3 0.881579 0.973684
4 GNH 0.858974 0.986667
5 9GM 0.839506 0.973684
6 GNP 0.839506 0.973684
7 G 0.828947 0.986486
8 5GP 0.828947 0.986486
9 G1R 0.82716 0.986667
10 GCP 0.82716 0.973684
11 GSP 0.817073 0.948718
12 GAV 0.797619 0.961039
13 GMV 0.792683 0.973684
14 G2P 0.77381 0.961039
15 G2R 0.770115 0.961039
16 GP2 0.756098 0.961039
17 GDC 0.747253 0.961039
18 GKE 0.747253 0.961039
19 GDD 0.747253 0.961039
20 GPG 0.741573 0.961039
21 G3D 0.732558 0.986486
22 ALF 5GP 0.729412 0.888889
23 Y9Z 0.728261 0.902439
24 G5P 0.723404 0.973684
25 GFB 0.72043 0.961039
26 GTG 0.72043 0.936709
27 GDR 0.72043 0.961039
28 G4P 0.715909 0.986486
29 G3A 0.712766 0.973684
30 6CK 0.712766 0.936709
31 GDP AF3 0.7 0.888889
32 ALF GDP 0.7 0.888889
33 GDP ALF 0.7 0.888889
34 YGP 0.698925 0.901235
35 GKD 0.697917 0.961039
36 JB2 0.697917 0.961039
37 GDX 0.690722 0.973684
38 GPD 0.690722 0.925
39 GMP 0.684211 0.88
40 0O2 0.666667 0.986486
41 JB3 0.656863 0.948718
42 NGD 0.650485 0.961039
43 DGI 0.636364 0.923077
44 GDP 7MG 0.636364 0.911392
45 U2G 0.634615 0.936709
46 GPX 0.634409 0.946667
47 G G 0.632653 0.948052
48 IDP 0.632184 0.972973
49 2MD 0.632075 0.891566
50 CAG 0.62963 0.880952
51 CG2 0.622642 0.936709
52 FEG 0.619048 0.879518
53 MGD 0.614679 0.891566
54 ZGP 0.613208 0.869048
55 GH3 0.612903 0.973333
56 3GP 0.611765 0.946667
57 MD1 0.607143 0.891566
58 PGD 0.59292 0.925
59 DGT 0.591398 0.923077
60 BGO 0.588785 0.924051
61 TPG 0.582609 0.840909
62 DBG 0.582609 0.948718
63 2GP 0.574713 0.96
64 FE9 0.570175 0.776596
65 GCP G 0.56 0.921053
66 A G 0.553571 0.935065
67 G A A A 0.553571 0.923077
68 MGP 0.553191 0.961039
69 U A G G 0.548673 0.935065
70 G4M 0.548387 0.880952
71 6G0 0.547368 0.961039
72 G1R G1R 0.542373 0.924051
73 P2G 0.527473 0.883117
74 PGD O 0.525 0.850575
75 ADP 0.522222 0.92
76 R5I 0.520833 0.946667
77 R7I 0.520833 0.946667
78 GGM 0.517544 0.901235
79 DGP 0.516484 0.910256
80 DG 0.516484 0.910256
81 P1G 0.516129 0.871795
82 G U 0.513274 0.9
83 G1G 0.508475 0.925
84 IMP 0.505495 0.959459
85 AKW 0.504425 0.890244
86 G C 0.504348 0.9
87 GPC 0.491525 0.879518
88 G7M 0.483871 0.948052
89 6AD 0.479592 0.841463
90 ATP 0.473684 0.92
91 HEJ 0.473684 0.92
92 G2Q 0.471154 0.961039
93 5FA 0.46875 0.92
94 AQP 0.46875 0.92
95 GTA 0.468468 0.936709
96 7DD 0.468085 0.906667
97 G G G RPC 0.466102 0.875
98 SGP 0.463158 0.82716
99 01G 0.462963 0.902439
100 HFD 0.459184 0.873418
101 B4P 0.457447 0.894737
102 AP5 0.457447 0.894737
103 A2D 0.456522 0.894737
104 6YZ 0.455446 0.896104
105 G G G C 0.455285 0.9125
106 5GP 5GP 0.454545 0.883117
107 ANP 0.454545 0.896104
108 ACQ 0.454545 0.896104
109 AT4 0.452632 0.884615
110 A G C C 0.451613 0.911392
111 APC G U 0.45082 0.886076
112 PRT 0.449541 0.959459
113 G U34 0.449153 0.888889
114 DG DG 0.448598 0.865854
115 ITT 0.447917 0.868421
116 BA3 0.446809 0.894737
117 C2E 0.444444 0.921053
118 PCG 0.444444 0.933333
119 35G 0.444444 0.933333
120 MGO 0.441176 0.864198
121 AN2 0.4375 0.907895
122 G C C C 0.4375 0.924051
123 M33 0.43299 0.883117
124 UCG 0.429688 0.911392
125 A G U 0.42963 0.888889
126 ACP 0.428571 0.896104
127 MGQ 0.424528 0.935897
128 AR6 0.424242 0.894737
129 7DT 0.424242 0.906667
130 APR 0.424242 0.894737
131 93A 0.42268 0.833333
132 A4P 0.420168 0.869048
133 G8D 0.42 0.875
134 AD9 0.42 0.896104
135 SAP 0.42 0.873418
136 AGS 0.42 0.873418
137 CA0 0.418367 0.896104
138 ATF 0.417476 0.884615
139 AGO 0.414634 0.888889
140 A G U U 0.414286 0.888889
141 NIA 0.413043 0.82716
142 MGV 0.412844 0.890244
143 TAT 0.411765 0.884615
144 T99 0.411765 0.884615
145 ADQ 0.411215 0.871795
146 A1R 0.411215 0.839506
147 RGT 0.410714 0.909091
148 CGP 0.409836 0.86747
149 C1Z 0.409091 0.986486
150 A 0.408602 0.893333
151 AMP 0.408602 0.893333
152 UP5 0.40678 0.873418
153 AMZ 0.406593 0.918919
154 C2R 0.406593 0.906667
155 JBT 0.405882 0.778947
156 A22 0.40566 0.907895
157 25L 0.405405 0.907895
158 ADX 0.40404 0.809524
159 8OD 0.401961 0.946667
160 50T 0.4 0.883117
161 4TC 0.4 0.851852
Similar Binding Sites (Proteins are less than 50% similar to leader)
Pocket No.: 1; Query (leader) PDB : 3CH5; Ligand: GDP; Similar sites found with APoc: 626
This union binding pocket(no: 1) in the query (biounit: 3ch5.bio1) has 17 residues
No: Leader PDB Ligand Sequence Similarity
1 1S7N COA 1.0989
2 4NU0 AP5 1.38889
3 1I0B PEL 1.38889
4 2V2V V12 1.38889
5 2X7I CIT 1.85185
6 1PSC EBP 1.85185
7 5XKT GNP 2
8 1BG2 ADP 2.31481
9 3DZD ADP 2.31481
10 2FNA ADP 2.31481
11 5WRJ A3P 2.31481
12 5WRI A3P 2.31481
13 1VKJ A3P 2.31481
14 3ITJ CIT 2.31481
15 5TVJ COA 2.31481
16 5TVJ 7LF 2.31481
17 3TK1 GDP 2.77778
18 1GOJ ADP 2.77778
19 2OBM ADP 2.77778
20 3BOS CDP 2.77778
21 4BFW ZVW 2.77778
22 1DAK DPU 2.77778
23 1DAK ADP 2.77778
24 1G3M A3P 2.77778
25 1G3M PCQ 2.77778
26 3MGB PAP 2.77778
27 2JEV NHQ 2.87356
28 2B4D COA 2.92398
29 2HF9 GSP 3.24074
30 5I34 GDP 3.24074
31 5J1J ANP 3.24074
32 1AQU A3P 3.24074
33 1SVI GDP 3.58974
34 3FKQ ATP 3.7037
35 3P4X ADP 3.7037
36 5Y6N ADP 3.7037
37 1W5T ANP 3.7037
38 1W5T ADP 3.7037
39 3QF7 ANP 3.7037
40 4TTQ ATP 3.72093
41 6A20 ADP 3.84615
42 4R43 GDP 3.84615
43 4JLS 3ZE 3.84615
44 1JJV ATP 3.8835
45 4M7V RAR 4
46 4M7V NAP 4
47 4LYA ATP 4.16667
48 1P72 ADP 4.16667
49 2IXE ATP 4.16667
50 2D2F ADP 4.16667
51 5LLB 6YZ 4.16667
52 1XX6 ADP 4.18848
53 4QRH 0O2 4.28571
54 4KOT CE3 4.32099
55 3B5J 12D 4.62963
56 1E2K TMC 4.62963
57 1LVK MNT BEF 4.62963
58 3EZ2 ADP 4.62963
59 2JJK R15 4.62963
60 3KC1 2T6 4.62963
61 5BYK A3P 4.6332
62 5BYK OAQ 4.6332
63 4X8O AP5 4.6729
64 2CDN ADP 4.97512
65 3A4M ADP 5.09259
66 2QEN ADP 5.09259
67 1G6H ADP 5.09259
68 2XAU ADP 5.09259
69 3NHB ADP 5.09259
70 1G41 ADP 5.09259
71 1OFH ADP 5.09259
72 3FVQ ATP 5.09259
73 2ZW5 COA 5.09259
74 1KO8 6PG 5.14286
75 2ZTS ADP 5.17928
76 5BQ5 ADP BEF 5.29101
77 2W58 ADP 5.44554
78 5GVR LMR 5.55556
79 4RZ3 ADP 5.55556
80 3LRE ADP 5.55556
81 1VHT BA3 5.55556
82 5ZB0 ADP 5.55556
83 5ZB0 TYD 5.55556
84 4KFU ACP 5.66038
85 4R2I ANP 5.71429
86 4ZKD GDP 5.76923
87 2VVG ADP 5.76923
88 5KSZ GCP 5.76923
89 4YDS ATP 5.76923
90 3ZQ6 ADP ALF 5.76923
91 2ZR9 DTP 5.76923
92 2C9O ADP 5.76923
93 5K5Z ANP 5.76923
94 1JI0 ATP 5.76923
95 4PFO ADP 5.76923
96 5LB3 ADP 5.76923
97 4YS0 ADP 5.76923
98 2F3R G5P 5.76923
99 2VB6 ADP BEF 5.76923
100 3RC3 ANP 5.76923
101 6H5E ANP 5.76923
102 1NV8 SAM 5.76923
103 1Y63 ADP 5.97826
104 1WF3 GNP 6.01852
105 2PZE ATP 6.01852
106 3T34 GDP 6.01852
107 2DPY ADP 6.01852
108 5VHC BEF ADP 6.01852
109 3QXC ATP 6.01852
110 4WZ6 ATP 6.01852
111 2CHG ANP 6.01852
112 3Q9L ATP 6.01852
113 2D7D ADP 6.01852
114 3QKT ANP 6.01852
115 2XTZ GSP 6.48148
116 1P9B GDP 6.48148
117 5IRR GSP 6.48148
118 5X40 ACP 6.48148
119 4PX9 ADP 6.48148
120 2BEK ATP 6.48148
121 2CBZ ATP 6.48148
122 1IN4 ADP 6.48148
123 1OE0 TTP 6.48148
124 2I4I AMP 6.48148
125 1GXU 2HP 6.59341
126 5MVR ADP 6.79012
127 4HUT ATP 6.80628
128 3WY9 GDP 6.94444
129 3WYA GDP 6.94444
130 1TAD ALF 6.94444
131 1TAD GDP 6.94444
132 3CNL GNP 6.94444
133 5LTJ ADP 6.94444
134 2CE7 ADP 6.94444
135 4GOX A3P 6.94444
136 5VGR GDP 6.94444
137 5LTJ BEF 6.94444
138 6EJI UD2 6.94444
139 4AVB ACO 6.94444
140 4UXH T5A 7.06522
141 1ZUI SKM 7.14286
142 3H86 AP5 7.29167
143 4BQS ADP 7.38636
144 4BQS K2Q 7.38636
145 2ODE ALF GDP 7.40741
146 2OM2 GDP 7.40741
147 5WC2 ADP 7.40741
148 4KVA GTP 7.40741
149 1SVK ALF GDP 7.40741
150 2PL3 ADP 7.40741
151 3G5N PB2 7.40741
152 2B8T THM 7.40741
153 1YRB GDP 7.69231
154 4H1V GNP 7.69231
155 3VX3 ADP 7.69231
156 3BFV ADP 7.69231
157 4TL6 ANP 7.69231
158 6B8B ADP 7.69231
159 5XDR ADP 7.69231
160 4HSE ADP 7.69231
161 1Z83 AP5 7.69231
162 1QF9 ALF 7.69231
163 1QF9 ADP 7.69231
164 1QF9 C5P 7.69231
165 4IDN GNP 7.69231
166 4OHY ANP 7.69231
167 5Z69 AGS 7.69231
168 6DEF GCP 7.69231
169 1NST A3P 7.69231
170 2A2C NG1 7.69231
171 2A2C ADP 7.69231
172 5MW4 5JU 7.69231
173 1Q19 SSC 7.69231
174 4A4Z ANP 7.69231
175 5IRN ADP 7.87037
176 4Q1A UDP 7.87037
177 4Q1A 2XZ 7.87037
178 2ZE7 AMP 7.87037
179 2ZE7 DST 7.87037
180 5AHO TLA 7.87037
181 1Q20 A3P 7.87037
182 1Q20 PLO 7.87037
183 5KUT GDP 7.93651
184 1NRJ GTP 8.33333
185 5BN3 ADP 8.33333
186 4YMU ATP 8.33333
187 1XMV ADP 8.33333
188 1NN5 2DT 8.37209
189 1NN5 ANP 8.37209
190 2WJG GDP 8.51064
191 1G7C 5GP 8.51064
192 3PQC GDP 8.71795
193 2JAQ DCP 8.78049
194 6G14 G4P 8.7963
195 5UIV ADP 8.7963
196 4QOS ADP 8.7963
197 2WJH GDP 9.03614
198 2WJH FLC 9.03614
199 4NON GDP 9.25926
200 2YOH WMJ 9.52381
201 4HI0 GDP 9.54774
202 2RCN GDP 9.61539
203 6AU6 GDP 9.61539
204 5W75 GDP 9.61539
205 3W5J GDP 9.61539
206 4CVN ADP 9.61539
207 5FHD ADP ALF 9.61539
208 1ZIN AP5 9.61539
209 5G3Y ADP 9.61539
210 5ZXD ATP 9.61539
211 2XTN GTP 9.61539
212 1XEX ATP 9.61539
213 1R6B ADP 9.61539
214 5FTB ANP 9.61539
215 2GK6 ADP 9.61539
216 4PPF FLC 9.61539
217 2QG6 NMN 9.61539
218 3KTA AP5 9.61539
219 5I0H ADP BEF 9.61539
220 1D2N ANP 9.61539
221 3IUY AMP 9.61539
222 3TBK ANP 9.61539
223 2J5V PCA 9.61539
224 3BER AMP 9.61539
225 2IL4 COA 9.61539
226 2JK0 ASP 9.61539
227 2ZPT A3P 9.61539
228 1QHH ATP 9.61539
229 1QHG ATP 9.61539
230 5K2M ADP 9.61539
231 4LPS GDP 9.72222
232 1B0U ATP 9.72222
233 5TIV A3P 9.72222
234 5KSP GDP 10
235 5H7J GCP 10.1852
236 5H7K GDP 10.1852
237 4D81 ADP 10.1852
238 3FYH ADP 10.6481
239 2IS6 ADP 10.6481
240 2GDJ ANP 10.6481
241 1FQJ GDP 10.8844
242 1FQK GDP 10.8844
243 1FQJ ALF 10.8844
244 1LVG ADP 11.1111
245 5H68 AGS 11.1111
246 6B4K ANP 11.1111
247 1M7G AV2 11.3744
248 1M7G ADX 11.3744
249 1M7G ADP 11.3744
250 4J0Q GDP 11.5385
251 3VMF GTP 11.5385
252 3WXM GTP 11.5385
253 1SKQ GDP 11.5385
254 3CX8 GSP 11.5385
255 3AB3 GDP 11.5385
256 4P4T GDP 11.5385
257 5U32 GDP 11.5385
258 2WHX ADP 11.5385
259 1ZCB GDP 11.5385
260 4IHQ ADP 11.5385
261 2AWN ADP 11.5385
262 1YQT ADP 11.5385
263 3FB4 AP5 11.5385
264 2BIF SIN 11.5385
265 2BIF ANP 11.5385
266 1XKV ATP 11.5385
267 1CR1 TTP 11.5385
268 4XGU ADP 11.5385
269 5YV5 ADP 11.5385
270 1SVM ATP 11.5385
271 5M7P ADP 11.5385
272 2JLR ANP 11.5385
273 1Z6T ADP 11.5385
274 2GMV UN8 11.5385
275 2GMV PEP 11.5385
276 1NHX FTB 11.5385
277 1NHX PEP 11.5385
278 6C90 ADP 11.5385
279 4JZ8 CIT 11.5385
280 4TMK T5A 11.5385
281 3V2U ATP 11.5385
282 5YF1 SFG 11.5385
283 5YF1 8V0 11.5385
284 2VOH CIT 11.5385
285 5EP2 AZU 11.5385
286 6CRK GDP 11.5741
287 1GP2 GDP 11.5741
288 1GOT GDP 11.5741
289 5KDO GDP 11.5741
290 1AKY AP5 11.5741
291 1UJ2 ADP 11.5741
292 1UJ2 C5P 11.5741
293 2XT3 ADP 12.037
294 3DEF GDP 12.037
295 3TMK T5A 12.037
296 1SQ5 ADP 12.037
297 2IYL GDP 12.5
298 3IO3 ADP 12.5
299 1OXV ANP 12.5
300 4NE2 SH2 12.5
301 4NE2 ADP 12.5
302 1H65 GDP 12.5
303 1NY5 ADP 12.5
304 5HCN GCP 12.963
305 1G7S GDP 12.963
306 1DAR GDP 12.963
307 4TMZ GSP 12.963
308 4NCN GTP 12.963
309 1T5C ADP 12.963
310 1F2U ATP 13.4228
311 5FG3 GDP 13.4259
312 2O0J ADP 13.4259
313 5TSH ADP 13.4615
314 3FWY ADP 13.4615
315 5TSH ANP 13.4615
316 2OFW ADX 13.4615
317 1F9V ADP 13.4615
318 2PEZ DAT 13.4615
319 2PEZ GGZ 13.4615
320 1X6V ADP 13.4615
321 2OZE AGS 13.4615
322 1RRC ADP 13.4615
323 1S3G AP5 13.4615
324 5N69 ADP 13.4615
325 5G41 AP5 13.4615
326 2FAH GDP 13.4615
327 1U0J ADP 13.4615
328 4WOP CTP 13.4615
329 2ORV 4TA 13.4615
330 4KBF AMP 13.4615
331 5NM7 GLY 13.4615
332 3KLL MAL 13.4615
333 5XOY LYS 13.4615
334 3RLF ANP 13.4615
335 4DDY DN6 13.4615
336 1BO4 COA 13.4615
337 2Z5F A3P 13.4615
338 3QVV A3P 13.4615
339 3QVV 3QV 13.4615
340 4ZDJ UTP 13.4615
341 3R96 AMP 13.4615
342 3R96 ACO 13.4615
343 2H7C COA 13.8889
344 4B47 GDP 14.3519
345 1JJ7 ADP 14.3519
346 5M04 GDP 14.8148
347 4DCT GDP 15.2778
348 3EC1 GDP 15.3846
349 2WOJ ADP ALF 15.3846
350 3ZS9 ADP ALF 15.3846
351 4XTR ATP 15.3846
352 4XTR ADP 15.3846
353 4XVU ATP 15.3846
354 2Q2Y ADP 15.3846
355 2Q2Y MKR 15.3846
356 2ZFI ADP 15.3846
357 4JLV ADP 15.3846
358 4YJ1 ADP 15.3846
359 4QM7 GTP 15.3846
360 5AK0 8V1 15.3846
361 1YTM ATP 15.3846
362 1L2T ATP 15.3846
363 2RGX AP5 15.3846
364 4MKG AP5 15.3846
365 4MKF AP5 15.3846
366 6FAA ADP 15.3846
367 3DKP ADP 15.3846
368 1W4R TTP 15.3846
369 4IEE AGS 15.3846
370 4GBM A3P 15.3846
371 4PJ3 ANP 15.3846
372 1H74 ADP 15.3846
373 3CIF G3H 15.3846
374 5J1S ATP 17.0732
375 1KK1 GNP 17.3077
376 3COB ADP 17.3077
377 4AG5 ADP 17.3077
378 4WZA ACP 17.3077
379 4WZA ADP 17.3077
380 1V8K ANP 17.3077
381 3ZFD ANP 17.3077
382 3H4S ADP 17.3077
383 4E03 ADP 17.3077
384 1QF5 GDP 17.3077
385 1QF5 RPL 17.3077
386 4FRZ ADP 17.3077
387 1FP6 ADP 17.3077
388 5ZBR ANP 17.3077
389 5EXT ADP 17.3077
390 2QZ4 ADP 17.3077
391 1UKZ ADP 17.3077
392 3EWA ANP 17.3077
393 1K6M AGS 17.3077
394 1NJF ADP 17.3077
395 1XP8 AGS 17.3077
396 2ZPA ADP 17.3077
397 1NJF AGS 17.3077
398 4ITM ATP 17.3077
399 5X62 SAH 17.3077
400 1TKB N1T 17.3077
401 2ZJ5 ADP 17.3077
402 6ECT SAM 17.3077
403 4OI4 ATP 17.3913
404 3IIJ ADP 18.3333
405 4R98 GNH 18.8192
406 4ZG4 VO4 ADP 18.9815
407 4RD0 GDP 19.2308
408 1TQ4 GDP 19.2308
409 2QN6 GDP 19.2308
410 5GOE GDP 19.2308
411 2Y65 ADP 19.2308
412 1IWE IMP 19.2308
413 2V7Q ATP 19.2308
414 2NCD ADP 19.2308
415 3DC4 ADP 19.2308
416 3HU3 AGS 19.2308
417 1W0J ADP 19.2308
418 2CK3 ANP 19.2308
419 5IFS ADP 19.2308
420 2V7Q ADP 19.2308
421 1W0J ADP BEF 19.2308
422 6AIC AMP 19.2308
423 5LV1 78T 19.2308
424 1OYY AGS 19.2308
425 2CK3 ADP 19.2308
426 5HR5 ADP 19.4444
427 2X77 GDP 19.5767
428 1WDT GTP 19.9074
429 1W7J ADP BEF 19.9074
430 1CS4 GSP 20.7547
431 3DOE GTP 20.8333
432 2KIN ADP 21
433 1UPT GTP 21.0526
434 4LC1 GDP 21.1538
435 3MD0 GDP 21.1538
436 3UIE ANP 21.1538
437 1OS1 PYR 21.1538
438 1KK8 BEF ADP 21.1538
439 1G6O ADP 21.1538
440 1OS1 ATP 21.1538
441 1IHU AF3 21.1538
442 1IHU ADP 21.1538
443 3B7G ANP 21.1538
444 1B7T ADP 21.1538
445 5C9P FUC 21.1538
446 3BFX A3P 21.1538
447 3AQ4 GDP 21.1957
448 4M9Q GNP 21.2963
449 1KSH GDP 21.5054
450 1F6B GDP 21.7172
451 1D2E GDP 21.7593
452 1HTW ADP 22.1519
453 1MKY GDP 22.2222
454 1O3Y GTP 22.2892
455 1J2J GTP 22.2892
456 2J59 GTP 22.2892
457 4YLG GDP 22.5434
458 2C78 GNP 23.0769
459 2C77 GNP 23.0769
460 4U00 ADP 23.0769
461 4KAX GTP 23.0769
462 4V03 ADP 23.0769
463 2GKS ADP 23.0769
464 4FCW ADP 23.0769
465 4LJ9 ACP 23.0769
466 4UTG ANP 23.0769
467 5H4S RAM 23.0769
468 1RE0 GDP 23.1707
469 1S9D GDP 23.1707
470 2A5F GTP 23.4286
471 2WIC GNP 23.6111
472 3PCR GTP 24.0741
473 2R4V GSH 24.0741
474 3N5C GDP 24.6914
475 2W83 GTP 24.8485
476 5W76 GDP 25
477 2B8W ALF 5GP 25
478 4IOK XPO 25
479 4IOK ADP 25
480 4ZNL BEF ADP 25
481 5MZN ADP 25
482 3A1S GDP 26.3889
483 3KJI ADP 26.9231
484 2QQ0 THM 26.9231
485 2QQ0 ANP 26.9231
486 2QQ0 TMP 26.9231
487 2QQ0 ADP 26.9231
488 1M2O GNP 27.3684
489 2GJ8 ALF GDP 27.907
490 4ZI2 GNP 28.4211
491 4GOJ GNP 28.5714
492 2QTV GNP 28.7425
493 3U6B GDP 28.8462
494 1D8T GDP 28.8462
495 2HCJ GDP 28.8462
496 4P3Y GDP 28.8462
497 5JBQ GDP 28.8462
498 4G5G GDP 28.8462
499 3U6K GDP 28.8462
500 2BVN GNP 28.8462
501 4PC3 GDP 28.8462
502 5MEX SZZ 28.8462
503 2F5X ASP 28.8462
504 5K04 COA 28.8462
505 2WKQ GTP 29.1667
506 3T12 GDP ALF 29.2929
507 3T1O GDP 29.2929
508 1YZG GDP 29.6089
509 2J0V GDP 29.717
510 1ZJ6 G3D 30.4813
511 5JCP GDP ALF 30.5556
512 1R0X ATP 30.7692
513 3REF GDP 30.9278
514 4BAS GNP 31.1558
515 2GCO GNP 31.8408
516 2GCN GDP 31.8408
517 1RYH GNP 32.5123
518 5W7Q GDP 32.6923
519 4V0K GDP 33.7278
520 2W2X GSP 34.0541
521 5DI3 GNP 34.0541
522 5XC5 GTP 34.0909
523 1OW3 GDP 34.1969
524 1NF3 GNP 34.359
525 2FSH ANP 34.6154
526 3SBD GNP 34.7594
527 1A4R GNH 35.0785
528 1A4R GDP 35.0785
529 4D0N GDP 35.1351
530 6BC0 GSP 35.1351
531 6BCA GSP 35.1351
532 6BCB GSP 35.1351
533 1CXZ GSP 35.1648
534 4DID GDP 35.2332
535 2NGR GDP 35.6021
536 1GRN GDP 35.6021
537 4ITR GDP 35.6021
538 3LXR GDP 35.6757
539 5HPY GDP 35.6757
540 2WMO GTP 35.7895
541 4XOI GTP 36.1111
542 2FJU GSP 36.5169
543 3ZIA ATP 36.5385
544 3ZIA ADP 36.5385
545 5E5U MLI 36.5385
546 4XSH GSP 36.8715
547 1KMQ GNP 36.9565
548 3T5G GDP 37.0166
549 5IRC GDP 37.0968
550 1TX4 ALF GDP 37.2881
551 5EE5 GTP 37.4269
552 4YC7 GNP 37.5691
553 5YT0 GDP 38.0952
554 1R4A GNP 38.7879
555 1ZD9 GDP 39.3617
556 2G77 GDP 40.404
557 4DKX GDP 41.6667
558 2F9L GDP 42.2111
559 2BCG GDP 42.233
560 5OCG GNP 42.328
561 2ZEJ GDP 42.3913
562 1OIX GDP 42.4084
563 4U5X GNP 42.6966
564 1OIV GDP 42.9319
565 2CJW GDP 43.75
566 5TAR GDP 43.7838
567 5TB5 GDP 43.7838
568 5UQW GDP 43.9153
569 3CPJ GDP 43.9815
570 2A9K GDP 44.9198
571 3TKL GTP 45.4082
572 1Z06 GNP 45.5026
573 3Q85 GNP 45.5621
574 3BC1 GNP 45.641
575 5UPK GNP 45.9459
576 6FA4 GNP 46.2428
577 2EW1 GNP 46.2687
578 4LX0 BEF GDP 46.3277
579 1VG0 GDP 46.3768
580 1VG8 GNP 46.3768
581 5JCZ GDP 46.9274
582 3Q72 GNP 46.988
583 3RWO GDP 47.027
584 1YZN GNP 47.027
585 2HV8 GTP 47.093
586 2A5J GDP 47.1204
587 2C5L GTP 47.3988
588 4C4P GNP 47.3988
589 5LEF GTP 47.644
590 5SZH GNP 47.7833
591 2D7C GTP 47.9042
592 5O2T GSP 47.929
593 1UAD GNP 48
594 5WLB GNP 48.1928
595 3SFV GDP 48.6188
596 1CLU DBG 48.7952
597 2UZI GTP 48.7952
598 5E95 GDP 48.8095
599 2HT6 GDP 48.8506
600 6BVJ GNP 49.1018
601 6BVL GNP 49.1018
602 6D59 GNP 49.1018
603 6D5J GNP 49.1018
604 6BVI GNP 49.1018
605 6D5E GNP 49.1018
606 6D5H GNP 49.1018
607 6BVK GNP 49.1018
608 6D56 GNP 49.1018
609 6D5V GNP 49.1018
610 6D55 GNP 49.1018
611 6D5G GNP 49.1018
612 1LFD GNP 49.1018
613 6D5L GNP 49.1018
614 6BVM GNP 49.1018
615 6D5M GNP 49.1018
616 5OEC GDP 49.1803
617 3KUD GDP 49.3976
618 1WQ1 GDP 49.3976
619 1NVV GNP 49.3976
620 1WQ1 AF3 49.3976
621 1Z0J GTP 49.4118
622 5O74 GDP 49.4444
623 1KY3 GDP 49.4506
624 1YVD GNP 49.7041
625 5WDR GNP 49.7076
626 2Y8E GNP 49.7207
627 3DDC GNP 50
Pocket No.: 2; Query (leader) PDB : 3CH5; Ligand: GDP; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 2) in the query (biounit: 3ch5.bio1) has 17 residues
No: Leader PDB Ligand Sequence Similarity
Pocket No.: 3; Query (leader) PDB : 3CH5; Ligand: GDP; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 3) in the query (biounit: 3ch5.bio1) has 17 residues
No: Leader PDB Ligand Sequence Similarity
Pocket No.: 4; Query (leader) PDB : 3CH5; Ligand: GDP; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 4) in the query (biounit: 3ch5.bio1) has 17 residues
No: Leader PDB Ligand Sequence Similarity
Pocket No.: 5; Query (leader) PDB : 3CH5; Ligand: GDP; Similar sites found with APoc: 2
This union binding pocket(no: 5) in the query (biounit: 3ch5.bio2) has 17 residues
No: Leader PDB Ligand Sequence Similarity
1 3R7F CP 1.85185
2 1T3D CYS 11.5385
Pocket No.: 6; Query (leader) PDB : 3CH5; Ligand: GDP; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 6) in the query (biounit: 3ch5.bio2) has 17 residues
No: Leader PDB Ligand Sequence Similarity
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