Receptor
PDB id Resolution Class Description Source Keywords
2ZEY 2.2 Å EC: 3.-.-.- FAMILY 16 CARBOHYDRATE BINDING MODULE THERMOANAEROBACTERIUM POLYSACCHAROLYTIORGANISM_TAXID: 44256 FAMILY 16 CBM-1 MANNOPENTAOSE COMPLEX GLYCOSIDASE HYDROLAS
Ref.: MOLECULAR BASIS FOR THE SELECTIVITY AND SPECIFICITY LIGAND RECOGNITION BY THE FAMILY 16 CARBOHYDRATE-BI MODULES FROM THERMOANAEROBACTERIUM POLYSACCHAROLYTI J.BIOL.CHEM. V. 283 12415 2008
Ligand
Ligand Chain:Residue Validity Ligand Warnings Binding Data NGL Viewer Molecular Weight (Da) Formula SMILES
BMA BMA BMA BMA BMA C:1;
 Valid;
 none;
 Kd = 153 uM
n/a n/a
CA A:152;
B:152;
 Part of Protein;
Part of Protein;
 none;
none;
 submit data
40.078 Ca [Ca+2...
MAN BMA BMA BMA BMA D:1;
 Valid;
 none;
 submit data
n/a n/a
View in 3D viewer
90% Homology Family
Leader
PDB id Resolution Class Description Source Keywords
2ZEY 2.2 Å EC: 3.-.-.- FAMILY 16 CARBOHYDRATE BINDING MODULE THERMOANAEROBACTERIUM POLYSACCHAROLYTIORGANISM_TAXID: 44256 FAMILY 16 CBM-1 MANNOPENTAOSE COMPLEX GLYCOSIDASE HYDROLAS
Ref.: MOLECULAR BASIS FOR THE SELECTIVITY AND SPECIFICITY LIGAND RECOGNITION BY THE FAMILY 16 CARBOHYDRATE-BI MODULES FROM THERMOANAEROBACTERIUM POLYSACCHAROLYTI J.BIOL.CHEM. V. 283 12415 2008
Members (4)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 312 families.
1 2ZEY Kd = 153 uM BMA BMA BMA BMA BMA n/a n/a
2 3OEB Ka = 6500 M^-1 MAN BMA BMA BMA BMA n/a n/a
3 3OEA Ka = 416300 M^-1 GLC BGC BGC BGC BGC n/a n/a
4 2ZEX Kd = 406 uM BGC BGC BGC BGC BGC n/a n/a
70% Homology Family (4)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 261 families.
1 2ZEY Kd = 153 uM BMA BMA BMA BMA BMA n/a n/a
2 3OEB Ka = 6500 M^-1 MAN BMA BMA BMA BMA n/a n/a
3 3OEA Ka = 416300 M^-1 GLC BGC BGC BGC BGC n/a n/a
4 2ZEX Kd = 406 uM BGC BGC BGC BGC BGC n/a n/a
50% Homology Family (4)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 214 families.
1 2ZEY Kd = 153 uM BMA BMA BMA BMA BMA n/a n/a
2 3OEB Ka = 6500 M^-1 MAN BMA BMA BMA BMA n/a n/a
3 3OEA Ka = 416300 M^-1 GLC BGC BGC BGC BGC n/a n/a
4 2ZEX Kd = 406 uM BGC BGC BGC BGC BGC n/a n/a
Polypharmacology
Similar Ligands (2D)
Ligand no: 1; Ligand: BMA BMA BMA BMA BMA; Similar ligands found: 0
No: Ligand ECFP6 Tc MDL keys Tc
Ligand no: 2; Ligand: MAN BMA BMA BMA BMA; Similar ligands found: 0
No: Ligand ECFP6 Tc MDL keys Tc
Similar Ligands (3D)
Ligand no: 1; Ligand: BMA BMA BMA BMA BMA; Similar ligands found: 3
No: Ligand Similarity coefficient
1 BMA BMA BMA BMA BMA 1.0000
2 MAN BMA BMA BMA BMA 0.9641
3 BGC BGC BGC BGC BGC 0.8824
Ligand no: 2; Ligand: MAN BMA BMA BMA BMA; Similar ligands found: 3
No: Ligand Similarity coefficient
1 MAN BMA BMA BMA BMA 1.0000
2 BMA BMA BMA BMA BMA 0.9641
3 BGC BGC BGC BGC BGC 0.8756
Similar Binding Sites (Proteins are less than 50% similar to leader) APoc FAQ
Feedback