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Receptor
PDB id Resolution Class Description Source Keywords
2Y69 1.95 Å EC: 1.9.3.1 BOVINE HEART CYTOCHROME C OXIDASE RE-REFINED WITH MOLECULAR BOS TAURUS ELECTRON TRANSPORT COMPLEX IV PROTON PUMPS MEMBRANE PROTE
Ref.: A COMBINED QUANTUM CHEMICAL AND CRYSTALLOGRAPHIC ST THE OXIDIZED BINUCLEAR CENTER OF CYTOCHROME C OXIDA BIOCHIM.BIOPHYS.ACTA V.1807 769 2011
Ligand
Ligand Chain:Residue Validity Ligand Warnings Binding Data NGL Viewer Molecular Weight (Da) Formula SMILES
CHD A:1517;
C:1265;
G:1085;
N:1517;
P:1265;
T:1085;
Valid;
Valid;
Valid;
Valid;
Valid;
Valid;
none;
none;
none;
none;
none;
none;
submit data
408.571 C24 H40 O5 C[C@H...
CU A:517;
N:517;
Part of Protein;
Part of Protein;
none;
none;
submit data
63.546 Cu [Cu+2...
CUA B:228;
O:228;
Part of Protein;
Part of Protein;
none;
none;
submit data
127.092 Cu2 [Cu][...
DMU M:1044;
Z:1043;
Invalid;
Invalid;
none;
none;
submit data
482.562 C22 H42 O11 CCCCC...
HEA A:515;
A:516;
N:515;
N:516;
Part of Protein;
Part of Protein;
Part of Protein;
Part of Protein;
none;
none;
none;
none;
submit data
852.837 C49 H56 Fe N4 O6 Cc1c2...
MG A:1516;
N:1516;
Part of Protein;
Part of Protein;
none;
none;
submit data
24.305 Mg [Mg+2...
OXY A:1515;
N:1515;
Invalid;
Invalid;
none;
none;
submit data
31.999 O2 O=O
PEK C:1262;
P:1262;
Invalid;
Invalid;
none;
none;
submit data
768.055 C43 H78 N O8 P CCCCC...
PGV C:1263;
C:1264;
P:1263;
P:1264;
Invalid;
Invalid;
Invalid;
Invalid;
none;
none;
none;
none;
submit data
749.007 C40 H77 O10 P CCCCC...
ZN F:1097;
S:1097;
Part of Protein;
Part of Protein;
none;
none;
submit data
65.409 Zn [Zn+2...
View in 3D viewer
90% Homology Family
Leader
PDB id Resolution Class Description Source Keywords
2Y69 1.95 Å EC: 1.9.3.1 BOVINE HEART CYTOCHROME C OXIDASE RE-REFINED WITH MOLECULAR BOS TAURUS ELECTRON TRANSPORT COMPLEX IV PROTON PUMPS MEMBRANE PROTE
Ref.: A COMBINED QUANTUM CHEMICAL AND CRYSTALLOGRAPHIC ST THE OXIDIZED BINUCLEAR CENTER OF CYTOCHROME C OXIDA BIOCHIM.BIOPHYS.ACTA V.1807 769 2011
Members (1)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 7 families.
1 2Y69 - CHD C24 H40 O5 C[C@H](CCC....
70% Homology Family (1)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 7 families.
1 2Y69 - CHD C24 H40 O5 C[C@H](CCC....
50% Homology Family (3)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 6 families.
1 5WAU - CHD C24 H40 O5 C[C@H](CCC....
2 5W97 - CHD C24 H40 O5 C[C@H](CCC....
3 2Y69 - CHD C24 H40 O5 C[C@H](CCC....
Polypharmacology
Similar Ligands
Ligand no: 1; Ligand: CHD; Similar ligands found: 6
No: Ligand ECFP6 Tc MDL keys Tc
1 CHD 1 1
2 GCH 0.785714 0.714286
3 DXC 0.609195 1
4 JN3 0.6 1
5 4OA 0.478261 0.972222
6 CHO 0.474747 0.714286
Similar Binding Sites (Proteins are less than 50% similar to leader)
Pocket No.: 1; Query (leader) PDB : 2Y69; Ligand: CHD; Similar sites found with APoc: 197
This union binding pocket(no: 1) in the query (biounit: 2y69.bio1) has 12 residues
No: Leader PDB Ligand Sequence Similarity
1 1WS1 BB2 6.41026
2 3SE5 ANP 7.31707
3 2QZT PLM 7.93651
4 2XSU PIE 7.93651
5 4O4Z N2O 8.44156
6 1G27 BB1 8.57143
7 4RHP PEF 8.75
8 5OHJ 9VE 8.81226
9 3GWT 066 8.81226
10 2RH1 CLR 9.46746
11 3OV6 MK0 10
12 4I4B 1CV 10
13 6GL8 F3Q 10.3093
14 3WHB DCC 10.4651
15 1DEK DGP 10.4651
16 3RET PYR 10.8911
17 4H6Q TFB 11.1111
18 2EW5 Y12 11.1111
19 3G08 FEE 11.25
20 2OBD PCW 11.4286
21 2OBD 2OB 11.4286
22 3RS8 APR 11.4286
23 1IIM TTP 11.4943
24 4RW3 TDA 11.6279
25 3MAX LLX 11.6279
26 6EVN PRO PRO GLY PRO ALA GLY PRO PRO GLY 11.7647
27 1M5W DXP 11.8421
28 3D04 SAK 11.9497
29 5GK9 ACO 12
30 1XON PIL 12.1622
31 4Q9M FPP 12.1622
32 3G58 988 12.1622
33 4V2O CLQ 12.1951
34 3SFI 3SF 12.5
35 5IF4 6AK 12.5
36 3G4G D71 12.7753
37 4G31 0WH 12.7907
38 3QKD HI0 12.7907
39 4KBS PX2 12.7907
40 6BYM HC3 12.7907
41 1BII ARG GLY PRO GLY ARG ALA PHE VAL THR ILE 12.7907
42 3TGE TGE 12.8571
43 1U1B PAX 12.9032
44 4E70 N7I 13.1783
45 2GJ3 FAD 13.3333
46 1EU8 TRE 13.5135
47 4OAS 2SW 13.5135
48 2A14 SAH 13.75
49 1XMY ROL 13.8158
50 1XM4 PIL 13.8158
51 1XMU ROF 13.8158
52 2F5Z FAD 13.9535
53 3RNM FAD 13.9535
54 4B5P ACO 14.2012
55 3G5K BB2 14.2012
56 3KXC PLM 14.2857
57 1S17 GNR 14.2857
58 5CHR 4NC 14.2857
59 4DXJ IPE 14.2857
60 4DXJ 0M9 14.2857
61 4F06 PHB 14.2857
62 4ITU NAI 14.433
63 1Q6O LG6 14.433
64 2OI9 GLN LEU SER PRO PHE PRO PHE ASP LEU 14.5251
65 5HH0 COA 14.5374
66 5JF2 SF7 14.7287
67 3KO0 TFP 14.8515
68 3ZO7 K6H 14.8936
69 4LOC BTN 15
70 3BXF 13P 15
71 2WPW ACO 15
72 1ZEI CRS 15.0943
73 5XS3 VAL ARG SER ARG ARG CYS LEU ARG LEU 15.3061
74 2PX6 DH9 15.4639
75 5TUX ECH 15.7143
76 4JHG ZEA 15.7143
77 2YLD CMO 15.748
78 3W54 RNB 15.873
79 5WPJ NDP 15.873
80 5WX3 COA 15.9763
81 3E7O 35F 16.25
82 5CC2 CKA 16.25
83 2Q8G AZX 16.25
84 3EKK GS2 16.2791
85 1U8V FAD 16.4474
86 4W4S B29 16.4948
87 2VBQ BSJ 17.0543
88 6GH1 ARG LEU PRO ALA LYS ALA PRO LEU LEU 17.4419
89 1UCD URA 17.4419
90 5EK3 5PK 17.4603
91 5CSD ACD 17.4603
92 3E8T UQ8 17.5
93 6BMS PLM 17.5
94 3SUD SUE 17.5
95 3ORF NAD 17.5
96 3NTD COA 17.7632
97 1M13 HYF 18.3432
98 1KQN NAD 18.5567
99 3PVT 3HC 18.5714
100 3HUJ AGH 18.6047
101 5V2J UDP 18.6047
102 5V2J 7WV 18.6047
103 5B0W 22B 18.75
104 1BWO LPC 18.75
105 5B4B LP5 18.75
106 6BQK Z1E 18.75
107 3PMD 11A 18.75
108 1TV5 A26 18.9189
109 2GWH PCI 19.0476
110 3E3U NVC 19.0476
111 5UI2 EQ3 19.0476
112 3IIS PID 19.2053
113 3L9R L9R 19.3878
114 4DV8 0LX 19.7674
115 3SCM LGN 19.7674
116 1JGS SAL 20
117 1OW4 2AN 20
118 2CNT COA 20
119 4I4Z 2NE 20
120 5Y24 GLY MET PRO ARG GLY ALA 20.2703
121 5YJF SAH 20.2703
122 2WH8 II2 20.2703
123 1RQJ RIS 20.2703
124 5YJF 8WO 20.2703
125 2J8C SPO 20.6349
126 2J8C U10 20.6349
127 4DR9 BB2 20.6349
128 5F2T PLM 20.6349
129 5GWE GWM 20.9302
130 5XJN 88L 20.9302
131 3T6E UQ9 21.25
132 6F90 MVL 21.25
133 6FA4 D1W 21.3873
134 3APT FAD 21.4286
135 5W8Q BU4 21.4286
136 1TFZ 869 21.6495
137 1X0P FAD 21.6783
138 4EOX 0S5 21.7054
139 5MTE BB2 21.7054
140 1XX4 BAM 22.2222
141 3U2U UDP 22.5
142 4M8E 29V 22.8571
143 3H0A D30 22.8571
144 3H0A 9RA 22.8571
145 3FAL REA 22.8571
146 2YYJ FAD 22.973
147 2YYJ 4HP 22.973
148 3K9U ACO 23.0263
149 1EE0 CAA 23.0769
150 4CVZ TYR GLU LEU ASP GLU LYS PHE ASP ARG LEU 23.2558
151 3O26 NDP 23.6686
152 5N69 2OW 23.7113
153 4DE2 DN3 23.7113
154 6EQ8 BQZ 23.8095
155 2Y31 SMQ 23.8095
156 1UVC STE 24.1758
157 3QUZ QUV 24.2857
158 5F1R 42O 24.2857
159 1T90 NAD 24.3243
160 6BA2 7KM 24.4186
161 5C2H 4PX 25.3968
162 5C2H 4XU 25.3968
163 4JE7 BB2 25.4438
164 2FDW D3G 25.6757
165 3W5N RAM 25.7143
166 3KEE 30B 26.087
167 4WO4 JLS 26.25
168 4NKW PLO 26.3158
169 3EXS 5RP 26.7442
170 2XAU ADP 26.7442
171 2XCG XCG 26.9841
172 1W96 S1A 26.9841
173 4NZ4 NDG 26.9841
174 2YOO K2B 27.1429
175 5LX9 OLA 27.5
176 5LWY OLA 27.5
177 5LX9 OLB 27.5
178 1O94 ADP 27.5
179 3STD MQ0 27.907
180 2ALG HP6 28.2609
181 2ALG DAO 28.2609
182 1Q1Y BB2 28.3784
183 1Y0G 8PP 29.7297
184 5ET3 60C 30
185 3ANP DCC 30
186 5UWA 8ND 31.0811
187 5LKT BCO 31.3953
188 1KDO C 31.4286
189 2A1L PCW 32.5
190 1LQY BB2 32.9897
191 5LOF 70R 33.3333
192 1NUS APC 34.0206
193 1NUS NMN 34.0206
194 2GU8 796 35
195 2R40 EPH 36.25
196 2OKL BB2 36.5079
197 6G28 AR6 43.75
198 5FKP 6UL 50
Pocket No.: 2; Query (leader) PDB : 2Y69; Ligand: CHD; Similar sites found with APoc: 859
This union binding pocket(no: 2) in the query (biounit: 2y69.bio1) has 8 residues
No: Leader PDB Ligand Sequence Similarity
1 3V2Q PLM None
2 4WG0 CHD None
3 5N8V KZZ 2.89855
4 4HIA FMN 3.97727
5 1NTV ASN PHE ASP ASN PRO VAL TYR ARG LYS THR 5.15464
6 3UST FAD 5.92105
7 5KAU RHQ 6.25
8 1L0I PSR 6.41026
9 3KP6 SAL 6.62252
10 2PEH LYS ARG LYS SER ARG TRP ASP GLU THR PRO 6.66667
11 5UGW GSH 6.85714
12 2WOR 2AN 7
13 3ZLM ANP 7.44681
14 5G3N X28 7.5
15 1N46 PFA 7.75194
16 6B5Q PPI CZS 2KY MLY 1XY 8
17 5NNT DPV 8.10811
18 4XB4 45D 8.13953
19 4LWU 20U 8.57143
20 2VZZ SCA 8.57143
21 5N9T 8QQ 8.68347
22 3D72 FAD 8.72483
23 4WH9 3M8 8.74317
24 4EKQ NPO 8.87574
25 3NFD COA 9.15033
26 2CB8 MYA 9.1954
27 4KXL 6C6 9.27835
28 5F06 GSH 9.30233
29 4S1B 2BA 9.45946
30 2QHD DAO 9.45946
31 1R5L VIV 9.45946
32 5N5U 7N8 9.46746
33 1MMQ RRS 9.46746
34 4I90 CHT 9.46746
35 4XT8 TMQ 9.52381
36 1CMC SAM 9.61539
37 3IS2 FAD 9.74026
38 6CS9 PIO 9.7561
39 6AYI C3G 9.86842
40 2WCJ M21 9.92908
41 5X4Q 7Z6 9.92908
42 5XK9 DMA 10
43 4RKK GLC GLC GLC GLC GLC GLC 10
44 5XK9 GST 10
45 5C1M CLR 10
46 5C1M 4VO 10
47 2O1V ADP 10
48 2C9E PID 10
49 4NAT ADP 10
50 5DQW ADP 10
51 2JFZ DGL 10
52 2JFZ 003 10
53 1FP6 ADP 10
54 5FM0 WAQ 10.0592
55 4N6H EJ4 10.0775
56 3IK7 BOB 10.0775
57 3S0E EOL 10.084
58 3SP6 IL2 10.3093
59 3KDU NKS 10.3093
60 3FEI CTM 10.3093
61 2FP2 TSA 10.3093
62 3ET1 ET1 10.3093
63 2NPA MMB 10.3093
64 5X80 SAL 10.3093
65 1NLI ADE 10.3093
66 2P54 735 10.3093
67 4DRI RAP 10.3093
68 3UWB BB2 10.3896
69 5UC1 486 10.4651
70 2BW7 ECS 10.5023
71 2BW7 APC 10.5023
72 3EWK FAD 10.5263
73 2Q4V ACO 10.5882
74 4DOL PLM 10.5991
75 5OWC AYZ 10.6557
76 3EE4 MYR 10.8108
77 1PZG A3D 10.8108
78 6AP8 BNY 10.8108
79 3R9V DXC 10.8392
80 3RET SAL 10.8911
81 2VWA PTY 10.8911
82 5SVV FMN 10.9489
83 5TWO 7MV 11.1111
84 4QJK COA 11.1111
85 3ET3 ET1 11.1111
86 3G9E RO7 11.1111
87 1ZGA HMK 11.1111
88 3B1M KRC 11.1111
89 2B96 ANN 11.1111
90 2HJ3 FAD 11.2
91 1OQC FAD 11.2
92 5X93 K87 11.2069
93 2AIB ERG 11.2245
94 3JRX S1A 11.2426
95 5D9J 0N8 11.25
96 2J83 BAT 11.25
97 3COW 52H 11.25
98 4WHZ 3NL 11.25
99 2Z9I GLY ALA THR VAL 11.25
100 3CH6 NAP 11.25
101 3CH6 311 11.25
102 3LDW ZOL 11.25
103 4GBD MCF 11.25
104 1D1G MTX 11.3095
105 2GBB CIT 11.3402
106 4CA5 3EF 11.3402
107 1YYE 196 11.4286
108 6FTB M0E 11.4286
109 3P0K FAD 11.4286
110 3F8C HT1 11.6279
111 3MBG FAD 11.6279
112 1OLM VTQ 11.6279
113 4OMJ 2TX 11.6279
114 4ELG 52J 11.6279
115 4ELG 52I 11.6279
116 4RW3 PLM 11.6279
117 5IUY BOG 11.6279
118 3D78 NBB 11.7647
119 3K87 FAD 11.8343
120 3NT6 COA 11.8421
121 3U5S FAD 11.9048
122 2DRC MTX 11.9497
123 3O55 FAD 12
124 5A4W QCT 12.1622
125 3O01 DXC 12.1622
126 3ZQE DXC 12.1622
127 5UC9 MYR 12.1622
128 1NU4 MLA 12.3711
129 2Q0D ATP 12.3711
130 4W97 UCA 12.4031
131 4OIV XX9 12.5
132 2UW1 GVM 12.5
133 4IA6 EIC 12.5
134 5ICK FEZ 12.5
135 3RUU 37G 12.5
136 1O6U PLM 12.5
137 5K52 OCD 12.6984
138 1FCH TYR GLN SER LYS LEU 12.6984
139 1S4P GDP 12.6984
140 1JAY F42 12.6984
141 1NQ7 HIS LYS ILE LEU HIS ARG LEU LEU GLN GLU 12.7907
142 4QVX 3CQ 12.7907
143 2EI4 22B 12.8571
144 2J1P GRG 12.8571
145 5Y79 3PG 12.8571
146 3SHZ 5CO 12.8571
147 2C31 TZD 12.8571
148 2C31 ADP 12.8571
149 1HK8 DGT 12.8571
150 3WV1 WHH 12.8571
151 6EDK 1YA 12.8571
152 3KCC CMP 12.8571
153 4RFM 3P6 12.8571
154 6GG9 FMN 12.8571
155 1ATL 0QI 12.8713
156 5LJ0 6XX 13.0769
157 3LXI CAM 13.1579
158 1VGV UD1 13.1783
159 6AP6 TLF 13.1783
160 1YMT DR9 13.2159
161 1YP0 PEF 13.2159
162 3R1V AZB 13.3858
163 4M4Q 21A 13.4021
164 1D6H COA 13.4021
165 5DCH 1YO 13.4021
166 2QV6 GTP 13.4021
167 2PFC PLM 13.4021
168 1OWB NAD 13.4021
169 1POC GEL 13.4021
170 1ZVX FIN 13.4969
171 2E2R 2OH 13.5135
172 3NBK PNS 13.5135
173 3F8K COA 13.5135
174 4HBM 0Y7 13.5135
175 4WT2 3UD 13.5135
176 4BXK 1IU 13.5135
177 6BTN E8M 13.5135
178 3AAQ ARU 13.5135
179 3MG9 GHP 3MY 3FG GHP GHP OMY 3FG 13.75
180 5CYV WCA 13.75
181 3P3G UKW 13.75
182 3P3G 3P3 13.75
183 4E90 7RG 13.75
184 1LN1 DLP 13.75
185 4QGE 35O 13.75
186 4ARE FLC 13.75
187 3V66 D3A 13.8158
188 5OVV ACE ILE GLU SER THR GLU ILE 13.8211
189 1ZDT PEF 13.9535
190 4QJR PIZ 13.9535
191 1HG4 LPP 13.9535
192 3ICT COA 13.9535
193 3ICS COA 13.9535
194 3H78 BE2 13.9535
195 4RI1 ACO 13.9535
196 4R38 RBF 13.9535
197 4QC6 30N 13.9665
198 5GPG RAP 13.9785
199 5BNS 4VM 14.2012
200 1EBL COA 14.2012
201 2HFP NSI 14.2857
202 5NTP 98E 14.2857
203 5NI5 8YB 14.2857
204 6ESN BWE 14.2857
205 5NTW 98N 14.2857
206 1YKD CMP 14.2857
207 3M6P BB2 14.2857
208 1K7L 544 14.2857
209 1SBR VIB 14.2857
210 5ZM0 FAD 14.2857
211 4GFD 0YB 14.2857
212 6F8B CXH 14.2857
213 5IXK 6EW 14.2857
214 1M48 FRG 14.2857
215 4WPF 3SN 14.2857
216 3NJQ NJQ 14.2857
217 1GEG GLC 14.2857
218 6FFI D8B 14.2857
219 1IYK MYA 14.433
220 4QBK 3NZ 14.433
221 4QVH COA 14.4737
222 2UXI G50 14.4737
223 6ANV MTT 14.4737
224 3HST MLR 14.4737
225 5HGZ ACO 14.5374
226 4IS0 1R4 14.7287
227 4CDN FAD 14.7287
228 2HFK E4H 14.7287
229 3P7N FMN 14.7929
230 4PYW ACE THR THR ALA ILE NH2 14.8649
231 3GZ9 D32 14.8649
232 1F7L COA 14.8649
233 6HH6 A3R 14.8649
234 5CX6 CDP 14.8649
235 3LSJ PLM COA 14.8649
236 3NB0 G6P 14.8649
237 2PSM BAM 14.876
238 6C7D EOJ 15
239 5EHR 5OD 15
240 1BZL GCG 15
241 3HCN CHD 15
242 4Y9J UCC 15
243 5DUF G7A 15
244 4INW 1EY 15
245 3C88 ARG ARG GLY CYS NH2 15
246 5YEE LAB 15
247 1UBY DMA 15
248 5ZZA LAB 15
249 4B1X LAB 15
250 3VVY ET 15
251 2OZ5 7XY 15
252 3NTA COA 15
253 5J47 6JJ 15
254 5ZZB LAB 15
255 6FS0 E4W 15
256 6GBV FMN 15.0685
257 1KJM ALA GLN PHE SER ALA SER ALA SER ARG 15.1163
258 2WUF KEM 15.1163
259 4DP3 MMV 15.1163
260 1MHC FME TYR PHE ILE ASN ILE LEU THR LEU 15.1316
261 4X6F 3XU 15.2381
262 2ASF CIT 15.3285
263 6D6L FY4 15.3846
264 5TIV A3P 15.4185
265 1M21 PHE CSI LEU PHA 15.4639
266 5MOB A8S 15.4639
267 3SDV 911 15.5039
268 1KUK PCA LYS TRP 15.5039
269 3NRR NAP 15.5039
270 3NRR D16 15.5039
271 3HYW DCQ 15.5039
272 4LPG 1MV 15.7088
273 4M0R 644 15.7143
274 4XU6 TDA 15.7143
275 3RGA ILD 15.7143
276 5MBC FMN 15.7143
277 2EIX FAD 15.7143
278 6CHP F0Y 15.7143
279 4L1F COS 15.7143
280 2YNC YNC 15.7143
281 4AVB ACO 15.7143
282 2TCL RO4 15.7143
283 6GD6 EVB 15.7143
284 6G5J EM8 15.7143
285 3A51 VDY 15.7143
286 4DO1 ANN 15.7143
287 4DW4 U5P 15.7895
288 5EY0 GTP 15.7895
289 4V24 GYR 15.873
290 3AQT RCO 15.873
291 3I51 6PL 15.873
292 2WZG UPG 15.873
293 4M73 M72 15.873
294 4M73 SAH 15.873
295 4KIB SAH 15.873
296 4F0B GDS 15.873
297 6EOP F15 15.873
298 1DTL BEP 15.873
299 1OFU GDP 15.9664
300 2C29 DQH 15.9763
301 5U98 1KX 16.1616
302 2D5Z L35 16.2162
303 5GUE GGS 16.2162
304 5LGD PLM 16.2162
305 4R57 ACO 16.2162
306 3QCP FAD 16.2162
307 6EDV COA 16.2162
308 1YSL COA 16.2162
309 3Q8G PEE 16.25
310 2X5W K2B 16.25
311 5Z1N PEF 16.25
312 3QMK SGN IDS SGN IDS 16.25
313 4TMN 0PK 16.25
314 3BJC WAN 16.25
315 5X3R 7Y3 16.25
316 3T50 FMN 16.25
317 4DRJ RAP 16.25
318 1MID LAP 16.25
319 5JFL NAD 16.25
320 5BQI 4UL 16.2791
321 5BQI GSH 16.2791
322 5A8E XTK 16.2791
323 5ZKC 3C0 16.2791
324 4BPM LVJ 16.2791
325 3OTX AP5 16.2791
326 3CR4 PNT 16.3043
327 3L9W AMP 16.4474
328 3L9W GSH 16.4474
329 2HZL PYR 16.4474
330 2ZFZ ARG 16.4557
331 4OPC PGT 16.4948
332 4FC7 COA 16.4948
333 4FC7 NAP 16.4948
334 2D37 NAD 16.4948
335 1N8V BDD 16.4948
336 6FQZ 6PG 16.4948
337 5DKK FMN 16.5517
338 4OYA 1VE 16.568
339 2HW2 RFP 17.0543
340 2PR5 FMN 17.0543
341 4MYD 164 17.0543
342 2ABS ACP 17.0543
343 5N7O 69Y 17.1053
344 1KPG 16A 17.1429
345 5HGR 45D 17.1429
346 6A46 DCM 17.1429
347 2YIV YIV 17.1429
348 3WCA FPS 17.1806
349 1OKC CXT 17.2414
350 1FO0 ILE ASN PHE ASP PHE ASN THR ILE 17.2414
351 1JR8 FAD 17.4419
352 4YV5 SVR 17.4419
353 4INB 1F6 17.4419
354 5OCA 9QZ 17.4419
355 2WKQ FMN 17.4419
356 1YQZ FAD 17.4603
357 3N7S 3N7 17.4603
358 5DLY 5D7 17.4603
359 2H7C COA 17.4603
360 5E70 RCD 17.4603
361 5MWE TCE 17.4603
362 3ROE THM 17.4603
363 4UDB CV7 17.5
364 5L7G 6QE 17.5
365 4H07 IPH 17.5
366 2A3I C0R 17.5
367 3RWP ABQ 17.5
368 4RC8 STE 17.5
369 6BR8 6OU 17.5
370 3CGD FAD 17.5
371 3CGD NAD 17.5
372 3CGD COA 17.5
373 3T58 FAD 17.5
374 5MWY YNU 17.5
375 1UDY FAD 17.5
376 1UDY CS8 17.5
377 5AZC PGT 17.5
378 5W7B PA1 PO4 FTT FTT GCS FTT PO4 KDO MYR 17.5
379 4Z87 GDP 17.5
380 6BR9 PGV 17.5
381 5L7G LYS SER LEU LEU GLN GLN LEU LEU THR GLU 17.5
382 5W7B MYR 17.5
383 4UNR QZE 17.5
384 6BR8 PGV 17.5
385 6BR9 6OU 17.5
386 4Q0A GLY HIS LYS ILE LEU HIS ARG LEU LEU GLN 17.5
387 5LGA 6VH 17.5
388 6BMS POV 17.5
389 3V78 ET 17.5
390 2Z6C FMN 17.5
391 5TT5 NAD 17.5258
392 4CL6 7SB 17.5439
393 4KVX ACO 17.5676
394 4MRP GSH 17.5676
395 4MRV HGD 17.5676
396 4MRS GDS 17.5676
397 3UR0 SVR 17.5676
398 2J4D FAD 17.5676
399 1LSH PLD 17.5676
400 5EYP LOC 17.5676
401 5OVC ACE GLU ALA GLN THR ARG LEU 17.7083
402 1XQP 8HG 17.7632
403 1XW6 GSH 17.7632
404 3IX9 MTX 17.8295
405 1HBK COA 17.9775
406 2PRG BRL 18.1818
407 6BJO DUY 18.4
408 5MW4 5JU 18.4211
409 5TO8 7FM 18.4211
410 1DKF OLA 18.5567
411 3KMZ EQO 18.5567
412 3TL1 JRO 18.5567
413 4Q0P 0MK 18.5567
414 5JCM FAD 18.5567
415 5JCM NAD 18.5567
416 5JCM ISD 18.5567
417 1DKF BMS 18.5567
418 5WL1 CUY 18.5714
419 5WL1 D3D 18.5714
420 3GWN FAD 18.5714
421 5C9J STE 18.5714
422 5HCV 60R 18.5714
423 5C9J DAO 18.5714
424 2P1C GG3 18.5714
425 3WR7 COA 18.5714
426 4XDA ADP 18.5714
427 1D5Z ACE ALC ARG ALA ODA SER LEU NH2 18.6047
428 3QCJ NX4 18.6047
429 2R75 01G 18.6047
430 5C0C ARG GLN PHE GLY PRO ASP TRP ILE VAL ALA 18.6047
431 5A07 GDP 18.6047
432 6B2M COA 18.6047
433 6B21 C9V 18.75
434 1R6N 434 18.75
435 2HKJ RDC 18.75
436 4ZBR NPS 18.75
437 4ZBR DIF 18.75
438 2BVL UDP 18.75
439 2BVL GLC 18.75
440 4FDV 0UK 18.75
441 6ADI 9UO 18.75
442 2O3Z AI7 18.75
443 3OTH CLJ 18.75
444 5LPA 71R 18.75
445 5LPA ATP 18.75
446 3AJH BL3 18.75
447 4WUJ FMN 18.75
448 4RPL 3UC 18.75
449 4XRZ SI6 18.75
450 4RPL FAD 18.75
451 4DJA DLZ 18.9189
452 4DJA FAD 18.9189
453 4U0S ADP 18.9189
454 2FV5 541 18.9189
455 1RX0 2MC 18.9189
456 5WIU AQD 18.9189
457 5XJ8 NKO 18.9189
458 5XJ7 87O 18.9189
459 3LN0 52B 18.9189
460 5U97 PIT 18.9189
461 1DQE BOM 18.9781
462 2VDY HCY 19.0476
463 1XRO LEU 19.0476
464 5JHD GLY ILE LEU GLY PHE VAL PHE THR LEU 19.0476
465 5ISZ GLY ILE LEU GLY PHE VAL PHE THR LEU 19.0476
466 4U03 GTP 19.0789
467 4U03 TLL 19.0789
468 5MFI LYS ARG LYS ARG LYS ARG LYS ARG 19.0789
469 5G57 6M5 19.3798
470 4MIB 28M 19.3833
471 5H94 LYS MET ASN THR GLN PHE THR ALA VAL 19.3878
472 4BNU 9KQ 19.5876
473 3GF4 U5P 19.5876
474 3GF4 FAD 19.5876
475 3GF4 UPG 19.5876
476 1JQI CAA 19.7368
477 3Q2H QHF 19.7368
478 5MKG C2E 19.7368
479 5ECP ATP 19.7368
480 5K7H IVC 19.7674
481 4U8P UDP 19.7674
482 4U8P FDA 19.7674
483 4PXZ 6AD 19.7674
484 1NP7 FAD 19.7674
485 1IID NHM 19.7674
486 5WZU 7W3 19.7674
487 5X5M 7YU 20
488 3ZCB ATP 20
489 4QHP 32Q 20
490 4PGK Y69 20
491 4LY9 1YY 20
492 4LY9 S6P 20
493 3VHZ L2P GLC MAN SGA 20
494 4PLT NAI 20
495 5MZI FYK 20
496 5MZI FAD 20
497 5O42 BGC 20
498 5O42 NAD 20
499 5O42 9JW 20
500 4P42 PEE 20
501 6F8A HIS 20
502 2CIX CEJ 20
503 3B96 MYA 20
504 2Z6D FMN 20
505 3VHZ SOG 20
506 1KZN CBN 20
507 4GCZ FMN 20
508 4F97 GDP 20
509 1TMX HGX 20.1365
510 4OHU NAD 20.2703
511 4OHU 2TK 20.2703
512 2C43 COA 20.2703
513 2XXP DSL 20.2703
514 6F3M ADN 20.2703
515 1U70 NDP 20.3947
516 1U70 MTX 20.3947
517 1GHE ACO 20.6186
518 4KVL PLM 20.6186
519 1SO2 666 20.6186
520 4ORR PE3 20.6186
521 3JRS A8S 20.6349
522 3ETG NDP 20.6349
523 3ETG GLU 20.6349
524 3ETG GTP 20.6349
525 1ZPD CIT 20.6349
526 3KDJ A8S 20.6349
527 3ETG GWD 20.6349
528 5YZC 95C 20.6349
529 4WZV E40 20.6349
530 1U72 MTX 20.6349
531 1U72 NDP 20.6349
532 2JEV NHQ 20.6349
533 3VRV YSD 20.6349
534 2O4J VD4 20.6349
535 2Q1H AS4 20.7048
536 3RY9 1CA 20.7048
537 2JC9 ADN 20.7101
538 1W3R 2MN 20.7101
539 5W99 A1V 20.9302
540 4NB5 2JT 20.9302
541 3QFJ LEU LEU PHE GLY PHE PRO VAL TYR VAL 20.9302
542 2C5A NAD 20.9302
543 2C5A GDC 20.9302
544 2BHW NEX 20.9302
545 2BHW LUX 20.9302
546 1CLU DBG 21.0843
547 2PX8 MGT 21.25
548 4MNS 2AX 21.25
549 4GU5 FAD 21.25
550 5KD8 TNR 21.25
551 1DMH LIO 21.25
552 3T6E MQ9 21.25
553 5OYH T99 21.25
554 3OKI OKI 21.4286
555 1M5B BN1 21.4286
556 2WZV FMN 21.4286
557 2Q6B HR2 21.4286
558 2BCG GER 21.4286
559 6CAY ERG 21.4286
560 3NC9 TR3 21.4286
561 3CX5 SMA 21.4286
562 3CXH SMA 21.4286
563 3ZUY TCH 21.4286
564 1FBL HTA 21.6216
565 5V3Y 5V8 21.6216
566 4K81 GTP 21.6374
567 1ZDU P3A 21.6495
568 1YUC EPH 21.6495
569 1YOK P6L 21.6495
570 5UNJ RJW 21.6495
571 5IBE 69M 21.6495
572 3QYY C2E 21.6495
573 4OIC A8S 21.7054
574 2NNQ T4B 21.7054
575 4I67 G G G RPC 21.8391
576 4JD3 PLM 21.8935
577 4JD3 COA 21.8935
578 3DZT EAH 22.093
579 3E2M E2M 22.093
580 4WGF HX2 22.093
581 1W2Y DUN 22.093
582 5B25 4QJ 22.093
583 1ELR ACE MET GLU GLU VAL ASP 22.093
584 4OAR 2S0 22.2222
585 1SR7 MOF 22.2222
586 5K53 STE 22.2222
587 2VJ8 HA2 22.2222
588 2XFH CL6 22.2222
589 1ZED PNP 22.2222
590 2XRH NIO 22.2222
591 1HFS L04 22.2222
592 2C4J GSO 22.2222
593 5AHS COA 22.2222
594 5F5N 5VD 22.2222
595 3CEV ARG 22.2222
596 2Z7I 742 22.4852
597 3WQM B29 22.5
598 2WPX ACO 22.5
599 4XRQ 1B0 22.5
600 5NWI TYR PHE SER SEP ASN 22.5
601 3M31 FAD 22.5
602 2V95 HCY 22.5
603 5V4R MGT 22.8395
604 5BYK A3P 22.8571
605 5BYK OAQ 22.8571
606 4POJ 2VP 22.8571
607 6A5Y 9CR 22.8571
608 5JO1 6LM 22.8571
609 4DS8 A8S 22.8571
610 6F6E PLM 22.8571
611 1N20 3AG 22.8571
612 3OJI PYV 22.8571
613 3ZCN ATP 22.8571
614 3R9C ECL 22.8571
615 2XN5 FUN 22.8571
616 5G61 FNY 22.8571
617 6FX0 E9T 22.8571
618 3RUG DB6 22.973
619 2JBZ COA 22.973
620 5UQK U2F 22.973
621 3HR1 PF9 22.973
622 4E2J MOF 23.2558
623 5UFS 1TA 23.2558
624 4ZB6 GDS 23.2558
625 2E9L BGC 23.6842
626 2E9L PLM 23.6842
627 1EM6 CP4 23.7113
628 4QOM PYG 23.7113
629 5OSW DIU 23.75
630 5OSW AE4 23.75
631 5M37 9SZ 23.75
632 6CGN DA 23.75
633 5EXA 5SO 23.75
634 4X60 3XV 23.75
635 4X60 SFG 23.75
636 3LLI FAD 23.75
637 5OLK DTP 23.75
638 5W7D PX8 23.8095
639 4LH7 NMN 23.8095
640 4KCF AKM 23.8095
641 1LBT T80 23.8095
642 1H16 COA 23.8095
643 5VRH OLC 23.8095
644 5MN0 A8S 23.8095
645 2IZ1 ATR 23.8095
646 1FM9 570 24
647 1RDT 570 24
648 1FM9 9CR 24
649 1RDT L79 24
650 3RDE OYP 24.031
651 4OB6 S2T 24.0469
652 5KOK R9T 24.2604
653 4E1M TQ2 24.2857
654 2AMV BIN 24.2857
655 4E1N TQX 24.2857
656 4QWT ACD 24.2857
657 3KRO DST 24.2857
658 3KRO IPE 24.2857
659 3W68 VIV 24.2857
660 1GNI OLA 24.3243
661 4Q86 AMP 24.3243
662 2WPF FAD 24.3243
663 3ZS7 ATP 24.3243
664 6H21 UD1 24.3243
665 2FKW RG1 24.3902
666 4ZGM 32M 24.4186
667 6AYH C3G 24.4186
668 3AHQ FAD 24.4186
669 5IVX ARG GLY PRO GLY ARG ALA PHE VAL THR ILE 24.4186
670 5WLB GNP 24.6988
671 3RMK BML 24.7423
672 4TWP AXI 24.7423
673 3QWB NDP 24.8062
674 4ZB8 GDS 24.8062
675 4V1T ADP 25
676 4MGB XDH 25
677 4EI7 GDP 25
678 4TV1 36M 25
679 2QZO KN1 25
680 4I6G FAD 25
681 4MG8 27J 25
682 4TUZ 36J 25
683 5XDT GDP 25
684 4MG9 27K 25
685 3UUA 0CZ 25
686 5WGD EST 25
687 2QA8 GEN 25
688 4MGD 27N 25
689 4MGA 27L 25
690 5DX3 EST 25
691 4JZX 476 25
692 4MG7 27H 25
693 3UUD EST 25
694 5WGQ EST 25
695 5KLP IHP 25
696 5DXE EST 25
697 2Q2Y ADP 25.3968
698 2Q2Y MKR 25.3968
699 2IBZ UQ6 25.3968
700 4O4K 2PK 25.3968
701 3RLF MAL 25.3968
702 1P1M MET 25.3968
703 1Q3A NGH 25.3968
704 5IKH 6BW 25.5814
705 1Z3C SA8 25.5814
706 4ZW9 GLC 25.6757
707 4ZW9 BGC 25.6757
708 4IGH 1EA 25.6757
709 4IGH FMN 25.6757
710 4IGH ORO 25.6757
711 5TVI MYR 25.6757
712 3OIG IMJ 25.7143
713 3CV2 COA 25.7143
714 1OPK P16 25.7732
715 3TDC 0EU 25.7732
716 1OPK MYR 25.7732
717 3KV8 FAH 25.8993
718 4WVO 3UZ 26.25
719 2QE4 JJ3 26.25
720 5AAV GW5 26.25
721 3GQT UFO 26.7442
722 3WYJ H78 26.9841
723 3HP9 CF1 26.9841
724 2ZCQ B65 27.027
725 1N1G BCP 27.027
726 1WDK N8E 27.1318
727 3V49 PK0 27.1429
728 2BIF BOG 27.1429
729 2AX9 BHM 27.1429
730 4LA7 A1O 27.1429
731 2I0G I0G 27.1429
732 2YJD YJD 27.1429
733 2VL8 UDP 27.1429
734 2VL8 CTS 27.1429
735 5JNN 6LM 27.1429
736 5EEH P9P 27.1429
737 5EEH SAH 27.1429
738 1U3R 338 27.1429
739 3OLL EST 27.1429
740 4TQ3 GPP 27.1429
741 2YB9 HA0 27.5
742 5LWY OLB 27.5
743 3RV5 DXC 27.5
744 1T0S BML 27.5
745 4EIL FOL 27.5
746 5LD8 6U5 27.6316
747 3HLX PQQ 27.6316
748 5LXT 7AK 27.907
749 5LXT GDP 27.907
750 5LXT GTP 27.907
751 1FK5 OLA 27.957
752 2X24 X24 28.2895
753 1XVB 3BR 28.3784
754 2R0N TGC 28.3784
755 1XVB BHL 28.3784
756 2C78 PUL 28.5714
757 1LVK MNT BEF 28.5714
758 4WKI 3PW 28.5714
759 6D5G FVD 28.5714
760 6D59 FVJ 28.5714
761 6D5E FVG 28.5714
762 6D55 FWA 28.5714
763 2QJY SMA 28.5714
764 6D5H FV7 28.5714
765 6BVI EC4 28.5714
766 6D56 FVM 28.5714
767 6BVL EBY 28.5714
768 6BVK EAV 28.5714
769 6D5J FV4 28.5714
770 6BVJ EAS 28.5714
771 3NMV PYV 28.5714
772 6D5L FW7 28.5714
773 4URX FK1 28.5714
774 6D5M FW4 28.5714
775 2A06 SMA 28.5714
776 4EES FMN 28.5714
777 6BVM EBV 28.5714
778 1H74 ADP 28.5714
779 1H74 ILE 28.5714
780 5AEI LYS ARG LYS ARG LYS ARG LYS ARG LYS ARG 28.5714
781 1OE0 TTP 28.5714
782 2EV1 OLA 28.6822
783 2ZXG S23 28.75
784 1YRE COA 28.75
785 1U3D FAD 28.75
786 3LOO B4P 28.75
787 5OPM DTP 28.75
788 1M2T ADE 28.866
789 3UMV FAD 29.4574
790 4TMK T5A 29.7297
791 1GUX ASP LEU TYR CYS TYR GLU GLN LEU ASN 29.7297
792 4QJL COA 30
793 3PE2 E1B 30
794 2E3N 6CM 30
795 3GST GPR 30
796 1N9L FMN 30
797 5OM2 DXT 30
798 5DJT FMN 30
799 2V0U FMN 30
800 5EFW FMN 30
801 5WQC 7MA 30
802 5DJU FMN 30
803 2QES ADE 30
804 1NF8 BOG 30.1587
805 3EBL GA4 30.1587
806 6BJ3 ILE PRO LEU THR GLU GLU ALA GLU LEU 30.2326
807 3TJH SER PRO LEU ASP SER LEU TRP TRP ILE 30.2326
808 3NHT U46 30.2632
809 4AIG FLX 31.0811
810 3X1M COA 31.0811
811 5CXI 5TW 31.0811
812 5K7K 6RJ 31.25
813 4O1Z MXM 31.3953
814 5T70 THR SER ASN LEU GLN GLU GLN ILE GLY TRP 31.4286
815 4J24 EST 31.5789
816 4COL DTP 31.746
817 4IAE 1DX 32.4324
818 3P9T TCL 32.4324
819 2VAT COA 32.5
820 5DRB 5FJ 32.5
821 5MEX SZZ 32.5
822 2UZI GTP 32.5
823 1OGA GLY ILE LEU GLY PHE VAL PHE THR LEU 32.5581
824 3B9Z CO2 32.5581
825 5V13 JH3 32.8571
826 4C2X NHW 32.8571
827 3GN8 DEX 33.3333
828 3DCT 064 33.3333
829 3G5N PB2 33.75
830 3B6C SDN 33.75
831 4G8R 96P 33.75
832 1NHZ 486 33.7838
833 4LSJ LSJ 33.7838
834 5G5W R8C 33.7838
835 3BQD DAY 33.7838
836 1M2Z DEX 33.7838
837 4P6X HCY 33.7838
838 5M36 9SZ 34.2105
839 1W6U HXC 34.2857
840 1Y7I SAL 34.9206
841 4YSX E23 35.1064
842 4YSX FAD 35.1064
843 4XPL ACO 35.1351
844 6C1R EFD 35.1351
845 4B52 RDF 35.1351
846 1G2N EPH 36.25
847 2R40 20E 36.25
848 1EWF PC1 36.25
849 2BJ4 OHT 36.3636
850 5IM3 DTP 36.4865
851 3FWN 6PG 36.5079
852 1T27 PCW 37.5
853 3F5K CE5 38.0952
854 1UOU CMU 38.0952
855 4OGQ 7PH 38.2353
856 4OGQ 1O2 38.2353
857 4OGQ 2WD 38.2353
858 4ZW3 4S9 38.75
859 2P4Q FLC 41.2698
Pocket No.: 3; Query (leader) PDB : 2Y69; Ligand: CHD; Similar sites found with APoc: 70
This union binding pocket(no: 3) in the query (biounit: 2y69.bio1) has 8 residues
No: Leader PDB Ligand Sequence Similarity
1 5L4L 7OX 9.30233
2 4UA3 COA 9.45946
3 2RH1 CAU 9.46746
4 1F9A ATP 10
5 1AL8 DHP 12.5
6 3ZLR X0B 12.7907
7 4BTB PRO PRO PRO PRO PRO PRO PRO PRO PRO 12.8571
8 3IA4 MTX 12.963
9 1ID0 ANP 13.1783
10 4AU7 SAH 13.5135
11 3HB5 E2B 13.75
12 3HB5 NAP 13.75
13 6ER9 NAP 14.2857
14 2FT0 ACO 14.2857
15 3FAP ARD 14.433
16 4KM2 TOP 14.7287
17 4KM2 ATR 14.7287
18 4C12 ADP 14.7929
19 2XBK XBK 14.8649
20 2GN2 C5P 14.8649
21 1I0B PEL 15.1316
22 4M7V RAR 15.7143
23 2J07 FAD 15.7143
24 2J07 HDF 15.7143
25 4EJ1 FOL 15.873
26 4RJD TFP 15.873
27 5FVJ ACO 16.2651
28 5GWT NAD 16.2791
29 4LAE 1VM 16.2996
30 4LAE NAP 16.2996
31 2VVT I24 17.1429
32 5ZW7 FAD 17.1429
33 6EKZ SNP 17.4603
34 2GTE VA 17.5676
35 6AOV SIA GAL NAG GAL NAG 18.3432
36 2OYH GLY HIS ARG PRO 18.75
37 5ECP JAA 19.7368
38 5ECP MET 19.7368
39 1QZY TDE 19.7674
40 3BIY 01K 20
41 1AOE NDP 20
42 1AOE GW3 20
43 2ZPA ACO 21.25
44 1KOR SIN 21.25
45 1KOR ARG 21.25
46 1KOR ANP 21.25
47 5AM1 I5T 21.8935
48 2F99 AKV 21.8935
49 1K97 CIR 22.973
50 1K97 ASP 22.973
51 3EJR HN4 23.75
52 3BEJ MUF 24
53 1YKI FMN 24.3243
54 4DHY