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Receptor
PDB id Resolution Class Description Source Keywords
2XI7 2.2 Å EC: 7.-.-.- N-TERMINAL ENDONUCLEASE DOMAIN OF LA CROSSE VIRUS L-PROTEIN BUNYAVIRUS LA CROSSE TRANSFERASE ENDONUCLEASE
Ref.: BUNYAVIRIDAE RNA POLYMERASES (L-PROTEIN) HAVE AN N-INFLUENZA-LIKE ENDONUCLEASE DOMAIN, ESSENTIAL FOR V DEPENDENT TRANSCRIPTION. PLOS PATHOG. V. 6 1101 2010
Ligand
Ligand Chain:Residue Validity Ligand Warnings Binding Data NGL Viewer Molecular Weight (Da) Formula SMILES
MN A:1184;
A:1185;
B:1184;
B:1185;
C:1184;
C:1185;
D:1184;
D:1185;
Part of Protein;
Part of Protein;
Part of Protein;
Part of Protein;
Part of Protein;
Part of Protein;
Part of Protein;
Part of Protein;
none;
none;
none;
none;
none;
none;
none;
none;
submit data
54.938 Mn [Mn+2...
XI7 A:1186;
B:1186;
C:1186;
D:1186;
Valid;
Valid;
Valid;
Valid;
none;
none;
none;
none;
submit data
192.168 C10 H8 O4 c1ccc...
View in 3D viewer
90% Homology Family
Leader
PDB id Resolution Class Description Source Keywords
2XI7 2.2 Å EC: 7.-.-.- N-TERMINAL ENDONUCLEASE DOMAIN OF LA CROSSE VIRUS L-PROTEIN BUNYAVIRUS LA CROSSE TRANSFERASE ENDONUCLEASE
Ref.: BUNYAVIRIDAE RNA POLYMERASES (L-PROTEIN) HAVE AN N-INFLUENZA-LIKE ENDONUCLEASE DOMAIN, ESSENTIAL FOR V DEPENDENT TRANSCRIPTION. PLOS PATHOG. V. 6 1101 2010
Members (1)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 293 families.
1 2XI7 - XI7 C10 H8 O4 c1ccc(cc1)....
70% Homology Family (1)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 250 families.
1 2XI7 - XI7 C10 H8 O4 c1ccc(cc1)....
50% Homology Family (1)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 204 families.
1 2XI7 - XI7 C10 H8 O4 c1ccc(cc1)....
Polypharmacology
Similar Ligands
Ligand no: 1; Ligand: XI7; Similar ligands found: 4
No: Ligand ECFP6 Tc MDL keys Tc
1 XI7 1 1
2 HTK 0.4375 0.64
3 GXD 0.418605 0.730769
4 GXG 0.409091 0.730769
Similar Binding Sites (Proteins are less than 50% similar to leader)
Pocket No.: 1; Query (leader) PDB : 2XI7; Ligand: XI7; Similar sites found with APoc: 30
This union binding pocket(no: 1) in the query (biounit: 2xi7.bio1) has 7 residues
No: Leader PDB Ligand Sequence Similarity
1 1J6X MET None
2 4MTI 2DX None
3 1VJE MSE 1.80723
4 3T01 PPF 2.71739
5 6BSL EVV 2.71739
6 3OJI PYV 3.26087
7 1PWB GLC 3.9548
8 1PWB GLC GLC 3.9548
9 5W7U GY8 4.34783
10 5D63 FUC GAL GLA 4.34783
11 1XS1 DUT 4.34783
12 4KIL 1R5 4.34783
13 2GGX NPJ 4.375
14 1F9A ATP 4.7619
15 3RFA SAM 4.8913
16 5JO1 6LM 5.43478
17 6FSG FMN 5.44218
18 3KAL ADP 5.97826
19 6FS8 E4Z 6.52174
20 5K8P 6R8 6.52174
21 2FQO HYI 7.00637
22 6B5G NAD 7.06522
23 1YNH SUO 7.06522
24 4O9C COA 7.6087
25 1AOE GW3 7.6087
26 1AOE NDP 7.6087
27 2WYA HMG 8.15217
28 1NP7 FAD 9.78261
29 1ZVW PRP 10.3261
30 2WKV COA 16.8478
Pocket No.: 2; Query (leader) PDB : 2XI7; Ligand: XI7; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 2) in the query (biounit: 2xi7.bio1) has 7 residues
No: Leader PDB Ligand Sequence Similarity
Pocket No.: 3; Query (leader) PDB : 2XI7; Ligand: XI7; Similar sites found with APoc: 11
This union binding pocket(no: 3) in the query (biounit: 2xi7.bio1) has 7 residues
No: Leader PDB Ligand Sequence Similarity
1 3A76 SPD 1.13636
2 1PNO NAP 3.88889
3 4GV8 DUP 4.14201
4 5D9J 0N8 4.34783
5 1NM5 NAD 4.8913
6 5MN0 A8S 5.43478
7 2OHH FMN 6.52174
8 2X61 NGA GAL SIA 9.23913
9 3AB4 LYS 11.7978
10 1HFU NAG NDG 12.5
11 2RIF AMP 17.9348
Pocket No.: 4; Query (leader) PDB : 2XI7; Ligand: XI7; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 4) in the query (biounit: 2xi7.bio1) has 7 residues
No: Leader PDB Ligand Sequence Similarity
Pocket No.: 5; Query (leader) PDB : 2XI7; Ligand: XI7; Similar sites found with APoc: 3
This union binding pocket(no: 5) in the query (biounit: 2xi7.bio1) has 7 residues
No: Leader PDB Ligand Sequence Similarity
1 1RM6 PCD 8.69565
2 4RVU NDP 10.8696
3 3C56 PH4 24.4565
Pocket No.: 6; Query (leader) PDB : 2XI7; Ligand: XI7; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 6) in the query (biounit: 2xi7.bio1) has 7 residues
No: Leader PDB Ligand Sequence Similarity
Pocket No.: 7; Query (leader) PDB : 2XI7; Ligand: XI7; Similar sites found with APoc: 10
This union binding pocket(no: 7) in the query (biounit: 2xi7.bio1) has 7 residues
No: Leader PDB Ligand Sequence Similarity
1 5TVA COA None
2 1BCJ NGA 1.94805
3 1W8S FBP 2.71739
4 6B2M COA 2.71739
5 4NTD FAD 3.26087
6 5IBE 69M 3.26087
7 1DJL NAP 4.8913
8 2EAE FUL 4.8913
9 4HGD KGT 5.43478
10 6B5G CQY 7.06522
Pocket No.: 8; Query (leader) PDB : 2XI7; Ligand: XI7; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 8) in the query (biounit: 2xi7.bio1) has 7 residues
No: Leader PDB Ligand Sequence Similarity
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