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Receptor
PDB id Resolution Class Description Source Keywords
2WJG 2.2 Å NON-ENZYME: TRANSPORT STRUCTURE AND FUNCTION OF THE FEOB G-DOMAIN FROM METHANOCOCCUS JANNASCHII METHANOCALDOCOCCUS JANNASCHII MEMBRANE G-PROTEINS FERROUS IRON TRANSPORT CELL MEMBRANE ION TRANSPORT TRANSMEMBRANE NUCLEOTIDE BINDING MOTIFS METAL TRANSPORT IRON GNBPS MEMBRANE TRANSPORT GTP-BINDING IRON TRANSPORT NUCLEOTIDE-BINDING
Ref.: STRUCTURE AND FUNCTION OF THE FEOB G-DOMAIN FROM METHANOCOCCUS JANNASCHII. J.MOL.BIOL. V. 392 405 2009
Ligand
Ligand Chain:Residue Validity Ligand Warnings Binding Data NGL Viewer Molecular Weight (Da) Formula SMILES
ALA ALA ALA ALA ALA ALA ALA C:9;
Invalid;
none;
submit data
515.568 n/a O=C([...
GDP A:200;
B:200;
Valid;
Valid;
none;
none;
submit data
443.201 C10 H15 N5 O11 P2 c1nc2...
View in 3D viewer
90% Homology Family
Leader
PDB id Resolution Class Description Source Keywords
2WJG 2.2 Å NON-ENZYME: TRANSPORT STRUCTURE AND FUNCTION OF THE FEOB G-DOMAIN FROM METHANOCOCCUS JANNASCHII METHANOCALDOCOCCUS JANNASCHII MEMBRANE G-PROTEINS FERROUS IRON TRANSPORT CELL MEMBRANE ION TRANSPORT TRANSMEMBRANE NUCLEOTIDE BINDING MOTIFS METAL TRANSPORT IRON GNBPS MEMBRANE TRANSPORT GTP-BINDING IRON TRANSPORT NUCLEOTIDE-BINDING
Ref.: STRUCTURE AND FUNCTION OF THE FEOB G-DOMAIN FROM METHANOCOCCUS JANNASCHII. J.MOL.BIOL. V. 392 405 2009
Members (1)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 209 families.
1 2WJG - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
70% Homology Family (4)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 175 families.
1 2WJJ - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
2 2WJH - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
3 2WJI - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
4 2WJG - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
50% Homology Family (4)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 149 families.
1 2WJJ - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
2 2WJH - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
3 2WJI - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
4 2WJG - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
Polypharmacology
Similar Ligands
Ligand no: 1; Ligand: GDP; Similar ligands found: 161
No: Ligand ECFP6 Tc MDL keys Tc
1 GDP 1 1
2 GTP 0.909091 1
3 GP3 0.881579 0.973684
4 GNH 0.858974 0.986667
5 9GM 0.839506 0.973684
6 GNP 0.839506 0.973684
7 G 0.828947 0.986486
8 5GP 0.828947 0.986486
9 G1R 0.82716 0.986667
10 GCP 0.82716 0.973684
11 GSP 0.817073 0.948718
12 GAV 0.797619 0.961039
13 GMV 0.792683 0.973684
14 G2P 0.77381 0.961039
15 G2R 0.770115 0.961039
16 GP2 0.756098 0.961039
17 GDC 0.747253 0.961039
18 GKE 0.747253 0.961039
19 GDD 0.747253 0.961039
20 GPG 0.741573 0.961039
21 G3D 0.732558 0.986486
22 ALF 5GP 0.729412 0.888889
23 Y9Z 0.728261 0.902439
24 G5P 0.723404 0.973684
25 GFB 0.72043 0.961039
26 GTG 0.72043 0.936709
27 GDR 0.72043 0.961039
28 G4P 0.715909 0.986486
29 G3A 0.712766 0.973684
30 6CK 0.712766 0.936709
31 GDP AF3 0.7 0.888889
32 ALF GDP 0.7 0.888889
33 GDP ALF 0.7 0.888889
34 YGP 0.698925 0.901235
35 GKD 0.697917 0.961039
36 JB2 0.697917 0.961039
37 GDX 0.690722 0.973684
38 GPD 0.690722 0.925
39 GMP 0.684211 0.88
40 0O2 0.666667 0.986486
41 JB3 0.656863 0.948718
42 NGD 0.650485 0.961039
43 DGI 0.636364 0.923077
44 GDP 7MG 0.636364 0.911392
45 U2G 0.634615 0.936709
46 GPX 0.634409 0.946667
47 G G 0.632653 0.948052
48 IDP 0.632184 0.972973
49 2MD 0.632075 0.891566
50 CAG 0.62963 0.880952
51 CG2 0.622642 0.936709
52 FEG 0.619048 0.879518
53 MGD 0.614679 0.891566
54 ZGP 0.613208 0.869048
55 GH3 0.612903 0.973333
56 3GP 0.611765 0.946667
57 MD1 0.607143 0.891566
58 PGD 0.59292 0.925
59 DGT 0.591398 0.923077
60 BGO 0.588785 0.924051
61 TPG 0.582609 0.840909
62 DBG 0.582609 0.948718
63 2GP 0.574713 0.96
64 FE9 0.570175 0.776596
65 GCP G 0.56 0.921053
66 A G 0.553571 0.935065
67 G A A A 0.553571 0.923077
68 MGP 0.553191 0.961039
69 U A G G 0.548673 0.935065
70 G4M 0.548387 0.880952
71 6G0 0.547368 0.961039
72 G1R G1R 0.542373 0.924051
73 P2G 0.527473 0.883117
74 PGD O 0.525 0.850575
75 ADP 0.522222 0.92
76 R5I 0.520833 0.946667
77 R7I 0.520833 0.946667
78 GGM 0.517544 0.901235
79 DGP 0.516484 0.910256
80 DG 0.516484 0.910256
81 P1G 0.516129 0.871795
82 G U 0.513274 0.9
83 G1G 0.508475 0.925
84 IMP 0.505495 0.959459
85 AKW 0.504425 0.890244
86 G C 0.504348 0.9
87 GPC 0.491525 0.879518
88 G7M 0.483871 0.948052
89 6AD 0.479592 0.841463
90 ATP 0.473684 0.92
91 HEJ 0.473684 0.92
92 G2Q 0.471154 0.961039
93 5FA 0.46875 0.92
94 AQP 0.46875 0.92
95 GTA 0.468468 0.936709
96 7DD 0.468085 0.906667
97 G G G RPC 0.466102 0.875
98 SGP 0.463158 0.82716
99 01G 0.462963 0.902439
100 HFD 0.459184 0.873418
101 B4P 0.457447 0.894737
102 AP5 0.457447 0.894737
103 A2D 0.456522 0.894737
104 6YZ 0.455446 0.896104
105 G G G C 0.455285 0.9125
106 5GP 5GP 0.454545 0.883117
107 ANP 0.454545 0.896104
108 ACQ 0.454545 0.896104
109 AT4 0.452632 0.884615
110 A G C C 0.451613 0.911392
111 APC G U 0.45082 0.886076
112 PRT 0.449541 0.959459
113 G U34 0.449153 0.888889
114 DG DG 0.448598 0.865854
115 ITT 0.447917 0.868421
116 BA3 0.446809 0.894737
117 C2E 0.444444 0.921053
118 PCG 0.444444 0.933333
119 35G 0.444444 0.933333
120 MGO 0.441176 0.864198
121 AN2 0.4375 0.907895
122 G C C C 0.4375 0.924051
123 M33 0.43299 0.883117
124 UCG 0.429688 0.911392
125 A G U 0.42963 0.888889
126 ACP 0.428571 0.896104
127 MGQ 0.424528 0.935897
128 AR6 0.424242 0.894737
129 7DT 0.424242 0.906667
130 APR 0.424242 0.894737
131 93A 0.42268 0.833333
132 A4P 0.420168 0.869048
133 G8D 0.42 0.875
134 AD9 0.42 0.896104
135 SAP 0.42 0.873418
136 AGS 0.42 0.873418
137 CA0 0.418367 0.896104
138 ATF 0.417476 0.884615
139 AGO 0.414634 0.888889
140 A G U U 0.414286 0.888889
141 NIA 0.413043 0.82716
142 MGV 0.412844 0.890244
143 TAT 0.411765 0.884615
144 T99 0.411765 0.884615
145 ADQ 0.411215 0.871795
146 A1R 0.411215 0.839506
147 RGT 0.410714 0.909091
148 CGP 0.409836 0.86747
149 C1Z 0.409091 0.986486
150 A 0.408602 0.893333
151 AMP 0.408602 0.893333
152 UP5 0.40678 0.873418
153 AMZ 0.406593 0.918919
154 C2R 0.406593 0.906667
155 JBT 0.405882 0.778947
156 A22 0.40566 0.907895
157 25L 0.405405 0.907895
158 ADX 0.40404 0.809524
159 8OD 0.401961 0.946667
160 50T 0.4 0.883117
161 4TC 0.4 0.851852
Similar Binding Sites (Proteins are less than 50% similar to leader)
Pocket No.: 1; Query (leader) PDB : 2WJG; Ligand: GDP; Similar sites found with APoc: 685
This union binding pocket(no: 1) in the query (biounit: 2wjg.bio2) has 16 residues
No: Leader PDB Ligand Sequence Similarity
1 2PZE ATP None
2 1GXU 2HP None
3 1W4R TTP None
4 3EWA ANP None
5 2ORV 4TA None
6 2IL4 COA None
7 2VBQ BSJ None
8 1ZEI CRS None
9 4K4D HFQ None
10 1WN3 HXC None
11 4FDV 0UK None
12 4BAS GNP 1.59574
13 4LPS GDP 1.59574
14 2J0V GDP 1.59574
15 2DPY ADP 1.59574
16 3UIE ANP 1.59574
17 1R0X ATP 1.59574
18 4WZ6 ATP 1.59574
19 2FFQ GSP 1.75439
20 1GWN GTP 2.12766
21 2OFW ADX 2.12766
22 5K5Z ANP 2.12766
23 5FHD ADP ALF 2.12766
24 5FTB ANP 2.12766
25 4IEE AGS 2.12766
26 1M7B GTP 2.17391
27 4U5X GNP 2.24719
28 2VVG ADP 2.65957
29 3TMK T5A 2.65957
30 3FYH ADP 2.65957
31 2GDJ ANP 2.65957
32 6C90 ADP 2.65957
33 1OE0 TTP 2.65957
34 4L1F COS 2.65957
35 1OYY AGS 2.65957
36 1I0B PEL 2.65957
37 1KUV CA5 2.65957
38 5OCQ CIT 2.65957
39 1CJW COT 3.01205
40 3F8K COA 3.125
41 2Y65 ADP 3.19149
42 2XT3 ADP 3.19149
43 2IYL GDP 3.19149
44 5IRN ADP 3.19149
45 2Q2Y ADP 3.19149
46 4ZNL BEF ADP 3.19149
47 2Q2Y MKR 3.19149
48 4JLV ADP 3.19149
49 1FP6 ADP 3.19149
50 1SQ5 ADP 3.19149
51 3QXC ATP 3.19149
52 3FKQ ATP 3.19149
53 5Z69 AGS 3.19149
54 2AWN ADP 3.19149
55 1XX6 ADP 3.19149
56 1JJV ATP 3.19149
57 5ZBR ANP 3.19149
58 4WOP CTP 3.19149
59 1U0J ADP 3.19149
60 3Q9L ATP 3.19149
61 3B7G ANP 3.19149
62 1BUC CAA 3.19149
63 2JJK R15 3.19149
64 3GN8 DEX 3.19149
65 5AHS COA 3.19149
66 4KVX ACO 3.20513
67 1U72 MTX 3.22581
68 1U72 NDP 3.22581
69 1D5C GDP 3.7037
70 4PPF FLC 3.7234
71 6A20 ADP 3.7234
72 5TSH ADP 3.7234
73 1G3Q ADP 3.7234
74 5VGR GDP 3.7234
75 5TSH ANP 3.7234
76 5G3Y ADP 3.7234
77 4GBM A3P 3.7234
78 4FCW ADP 3.7234
79 5J1J ANP 3.7234
80 1G6O ADP 3.7234
81 2PL3 ADP 3.7234
82 1Q20 A3P 3.7234
83 1Q20 PLO 3.7234
84 3QVV A3P 3.7234
85 3QVV 3QV 3.7234
86 1ZUA TOL 3.7234
87 1ZUA NAP 3.7234
88 3IUY AMP 3.7234
89 6H5E ANP 3.7234
90 2F3R G5P 3.7234
91 4HUT ATP 3.7234
92 4UXH T5A 3.80435
93 1KY3 GDP 3.84615
94 1KO8 6PG 4
95 2OM2 GDP 4.25532
96 3BC1 GNP 4.25532
97 1RYH GNP 4.25532
98 2WKQ GTP 4.25532
99 4KFU ACP 4.25532
100 1M7G AV2 4.25532
101 1M7G ADX 4.25532
102 1CR1 TTP 4.25532
103 1ZIN AP5 4.25532
104 1T5C ADP 4.25532
105 2OBM ADP 4.25532
106 4PFO ADP 4.25532
107 2NCD ADP 4.25532
108 2ZR9 DTP 4.25532
109 2CBZ ATP 4.25532
110 4MKF AP5 4.25532
111 1S3G AP5 4.25532
112 4NU0 AP5 4.25532
113 3FB4 AP5 4.25532
114 3P4X ADP 4.25532
115 5G41 AP5 4.25532
116 4X8O AP5 4.25532
117 4MKG AP5 4.25532
118 3LRE ADP 4.25532
119 1OS1 PYR 4.25532
120 1OS1 ATP 4.25532
121 1XMV ADP 4.25532
122 1Z83 AP5 4.25532
123 5TIV A3P 4.25532
124 1QF9 C5P 4.25532
125 1QF9 ALF 4.25532
126 1QF9 ADP 4.25532
127 4E03 ADP 4.25532
128 2FAH GDP 4.25532
129 5LTJ ADP 4.25532
130 2XAU ADP 4.25532
131 3DKP ADP 4.25532
132 6B4K ANP 4.25532
133 4R2I ANP 4.25532
134 2ZPA ADP 4.25532
135 1FNN ADP 4.25532
136 5I0H ADP BEF 4.25532
137 5MEX SZZ 4.25532
138 5MEX PAP 4.25532
139 4CS9 AMP 4.25532
140 1FWY UD1 4.25532
141 1M7G ADP 4.25532
142 3SBD GNP 4.27807
143 1MH1 GNP 4.30108
144 2FJU GSP 4.49438
145 1HE1 GDP 4.54545
146 5Z2M GTP 4.54545
147 2VB6 ADP BEF 4.69799
148 1DS6 GDP 4.78723
149 1BG2 ADP 4.78723
150 1GOJ ADP 4.78723
151 3A4M ADP 4.78723
152 1DAK DPU 4.78723
153 1DAK ADP 4.78723
154 5ZXD ATP 4.78723
155 4R43 GDP 4.78723
156 1R6B ADP 4.78723
157 3EZ2 ADP 4.78723
158 2YOH WMJ 4.78723
159 3DZD ADP 4.78723
160 4YJ1 ADP 4.78723
161 3B9Q MLI 4.78723
162 2GWH A3P 4.78723
163 2B8T THM 4.78723
164 1T8U UAP SGN IDS SGN 4.78723
165 1T8U A3P 4.78723
166 2FSH ANP 4.78723
167 5NM7 GLY 4.78723
168 3RC3 ANP 4.78723
169 4KBF AMP 4.78723
170 2J5V PCA 4.78723
171 4D0N GDP 4.86486
172 2W2X GSP 4.86486
173 5HPY GDP 4.86486
174 6BCB GSP 4.86486
175 6BCA GSP 4.86486
176 5MVR ADP 4.93827
177 4XSH GSP 5.02793
178 2Y8E GNP 5.02793
179 1TX4 ALF GDP 5.08475
180 4QM7 GTP 5.26316
181 1TQ4 GDP 5.31915
182 1OW3 GDP 5.31915
183 1E96 GTP 5.31915
184 5IRC GDP 5.31915
185 3IO3 ADP 5.31915
186 1P9B GDP 5.31915
187 5EXT ADP 5.31915
188 1UJ2 ADP 5.31915
189 1UJ2 C5P 5.31915
190 1AKY AP5 5.31915
191 4LYA ATP 5.31915
192 5LB3 ADP 5.31915
193 2IS6 ADP 5.31915
194 2BEK ATP 5.31915
195 5J1S ATP 5.31915
196 2ZTS ADP 5.31915
197 3FVQ ATP 5.31915
198 4XGU ADP 5.31915
199 4IOK XPO 5.31915
200 4IOK ADP 5.31915
201 4A4Z ANP 5.31915
202 1J99 AND 5.31915
203 3ITJ CIT 5.31915
204 3ITJ FAD 5.31915
205 3ORF NAD 5.31915
206 4ITM ATP 5.31915
207 2QQ0 ANP 5.43478
208 2QQ0 THM 5.43478
209 2QQ0 ADP 5.43478
210 2QQ0 TMP 5.43478
211 3IIJ ADP 5.55556
212 3ZIA ATP 5.7971
213 3ZIA ADP 5.7971
214 5YT0 GDP 5.85106
215 6AU6 GDP 5.85106
216 1CS4 GSP 5.85106
217 5XKT GNP 5.85106
218 4KVA GTP 5.85106
219 3ZQ6 ADP ALF 5.85106
220 4WZA ADP 5.85106
221 4WZA ACP 5.85106
222 6CS8 F9Y 5.85106
223 4V03 ADP 5.85106
224 2QZ4 ADP 5.85106
225 5WC2 ADP 5.85106
226 4D81 ADP 5.85106
227 1LVK MNT BEF 5.85106
228 2RGX AP5 5.85106
229 1V8K ANP 5.85106
230 3ZFD ANP 5.85106
231 6B8B ADP 5.85106
232 1XKV ATP 5.85106
233 5GVR LMR 5.85106
234 5K04 COA 5.85106
235 4D42 NAP 5.85106
236 4D42 W0I 5.85106
237 1NST A3P 5.85106
238 1AQU A3P 5.85106
239 5ZB0 TYD 5.85106
240 5ZB0 ADP 5.85106
241 2BME GNP 5.91398
242 1Y63 ADP 5.97826
243 1MR3 G3D 6.07735
244 3NRZ FAD 6.09756
245 3H86 AP5 6.25
246 3CX8 GSP 6.38298
247 1DAR GDP 6.38298
248 1TAD GDP 6.38298
249 1TAD ALF 6.38298
250 1Y3A GDP 6.38298
251 1G4U GDP 6.38298
252 3AB3 GDP 6.38298
253 1FQK GDP 6.38298
254 1ZCB GDP 6.38298
255 5U32 GDP 6.38298
256 2C9O ADP 6.38298
257 4NE2 SH2 6.38298
258 4NE2 ADP 6.38298
259 5I34 GDP 6.38298
260 4PX9 ADP 6.38298
261 3NHB ADP 6.38298
262 1XP8 AGS 6.38298
263 5WRJ A3P 6.38298
264 5WRI A3P 6.38298
265 5BYK OAQ 6.38298
266 5BYK A3P 6.38298
267 5L3R GCP 6.38298
268 2ZE7 DST 6.38298
269 2ZE7 AMP 6.38298
270 1VHT BA3 6.38298
271 5EW9 5VC 6.38298
272 5H67 ATP 6.38298
273 5E5U MLI 6.38298
274 6AIC AMP 6.38298
275 3NT6 FAD 6.38298
276 2ZEJ GDP 6.52174
277 1ZUI SKM 6.54762
278 3SFV GDP 6.62983
279 5O74 GDP 6.66667
280 4CVN ADP 6.80628
281 3MD0 GDP 6.91489
282 3TK1 GDP 6.91489
283 1ION ADP 6.91489
284 3TKL GTP 6.91489
285 2GKS ADP 6.91489
286 1NN5 2DT 6.91489
287 1NN5 ANP 6.91489
288 2QG6 NMN 6.91489
289 2B8W ALF 5GP 6.91489
290 2CDN ADP 6.91489
291 4ZG4 VO4 ADP 6.91489
292 2CE7 ADP 6.91489
293 2OZE AGS 6.91489
294 2FNA ADP 6.91489
295 2GK6 ADP 6.91489
296 4NSQ COA 6.91489
297 1F5N GNP 6.91489
298 1EK0 GNP 7.05882
299 1ZC3 GNP 7.07965
300 3MJH GTP 7.14286
301 1U8Z GDP 7.14286
302 2PEZ GGZ 7.26257
303 2PEZ DAT 7.26257
304 5XC5 GTP 7.38636
305 4HI0 GDP 7.44681
306 4LC1 GDP 7.44681
307 3LXR GDP 7.44681
308 4RD0 GDP 7.44681
309 5KSP GDP 7.44681
310 2GCO GNP 7.44681
311 5KSZ GCP 7.44681
312 2GCN GDP 7.44681
313 2HF9 GSP 7.44681
314 3DC4 ADP 7.44681
315 4OI4 ATP 7.44681
316 2GMV UN8 7.44681
317 2GMV PEP 7.44681
318 1NHX FTB 7.44681
319 1NHX PEP 7.44681
320 1W5T ADP 7.44681
321 1NJF ADP 7.44681
322 4PJ3 ANP 7.44681
323 5XDR ADP 7.44681
324 3TBK ANP 7.44681
325 1NJF AGS 7.44681
326 1W5T ANP 7.44681
327 2IXE ATP 7.44681
328 1KMQ GNP 7.6087
329 3RAB GNP 7.69231
330 1BO4 COA 7.7381
331 1CM0 COA 7.7381
332 2QN6 GDP 7.97872
333 2XTZ GSP 7.97872
334 4RZ3 ADP 7.97872
335 4AG5 ADP 7.97872
336 5UQW GDP 7.97872
337 4HSE ADP 7.97872
338 3BOS CDP 7.97872
339 5M7P ADP 7.97872
340 1IHU AF3 7.97872
341 1IHU ADP 7.97872
342 3BFX A3P 7.97872
343 6FAA ADP 7.97872
344 4YS0 ADP 7.97872
345 1G3M PCQ 7.97872
346 1G3M A3P 7.97872
347 2WOJ ADP ALF 7.97872
348 1X8J A3P 7.97872
349 3ICR FAD 7.97872
350 3ICS FAD 7.97872
351 2ZJ5 ADP 7.97872
352 3NKV GNP 8
353 3QBT GNP 8.04598
354 3TNF GNP 8.04598
355 2GAG NAD 8.08081
356 4C4P GNP 8.09249
357 1CXZ GSP 8.13953
358 4TTQ ATP 8.37209
359 1KAO GDP 8.38323
360 1KK1 GNP 8.51064
361 6CRK GDP 8.51064
362 4HAT GNP 8.51064
363 5BXQ GDP 8.51064
364 3CH5 GDP 8.51064
365 4P4T GDP 8.51064
366 4M9Q GNP 8.51064
367 5JCP GDP ALF 8.51064
368 1IBR GNP 8.51064
369 3GJX GTP 8.51064
370 1G41 ADP 8.51064
371 4QOS ADP 8.51064
372 5BQ5 ADP BEF 8.51064
373 5H68 AGS 8.51064
374 2CHG ANP 8.51064
375 4ZDJ UTP 8.51064
376 5LLB 6YZ 8.51064
377 3SXN COA 8.51064
378 3ZL8 ADP 8.51064
379 2A9K GDP 8.55615
380 4LHW GNP 8.62069
381 3WYG GTP 8.79121
382 5O2T GSP 8.87574
383 2KIN ADP 9
384 5CK5 GDP 9.04255
385 2WMO GTP 9.04255
386 1RJ9 GCP 9.04255
387 3BFV ADP 9.04255
388 5AK0 8V1 9.04255
389 5HR5 ADP 9.04255
390 4OHY ANP 9.04255
391 1YTM ATP 9.04255
392 1F9V ADP 9.04255
393 1UKZ ADP 9.04255
394 5N69 ADP 9.04255
395 2D7D ADP 9.04255
396 3BD9 A3P 9.04255
397 5EP2 AZU 9.04255
398 6GVZ CHO 9.04255
399 4LIK CIT 9.04255
400 3RLF ANP 9.04255
401 3E5H GNP 9.55056
402 2NGR GDP 9.57447
403 3FWY ADP 9.57447
404 1A4R GNH 9.57447
405 1GRN GDP 9.57447
406 1A4R GDP 9.57447
407 4ITR GDP 9.57447
408 1QF5 GDP 9.57447
409 1QF5 RPL 9.57447
410 2BIF SIN 9.57447
411 2BIF ANP 9.57447
412 2QEN ADP 9.57447
413 3KJI ADP 9.57447
414 4BFW ZVW 9.57447
415 1NF3 GNP 9.57447
416 1SVM ATP 9.57447
417 4LJ9 ACP 9.57447
418 2ZPT A3P 9.57447
419 4QIJ 1HA 9.57447
420 4QRH 0O2 9.57447
421 2JAQ DCP 9.57447
422 5TVJ 7LF 9.57447
423 5TVJ COA 9.57447
424 2YY7 NAD 9.57447
425 4XTR ADP 10
426 4XTR ATP 10
427 4XVU ATP 10
428 3T1O GDP 10.1064
429 3T12 GDP ALF 10.1064
430 3GJ0 GDP 10.1064
431 3GJ3 GDP 10.1064
432 1WDT GTP 10.1064
433 4LX0 BEF GDP 10.1064
434 5OCG GNP 10.1064
435 1IN4 ADP 10.1064
436 2Z5F A3P 10.1064
437 2O0J ADP 10.1064
438 3HQ9 OXL 10.1064
439 4TMK T5A 10.1064
440 3BER AMP 10.1064
441 1A8U BEZ 10.1064
442 5TB5 GDP 10.2703
443 5TAR GDP 10.2703
444 1OFH ADP 10.3448
445 5FG3 GDP 10.6383
446 5DIF GNP 10.6383
447 5UWP GNP 10.6383
448 5UWU GNP 10.6383
449 6CIT GNP 10.6383
450 5UWH GNP 10.6383
451 5UWI GNP 10.6383
452 5UWT GNP 10.6383
453 5UWW GNP 10.6383
454 5UWS GNP 10.6383
455 5UWQ GNP 10.6383
456 5DHF GNP 10.6383
457 5UWO GNP 10.6383
458 3GJ8 GDP 10.6383
459 5UWR GNP 10.6383
460 3GJ7 GDP 10.6383
461 3GJ4 GDP 10.6383
462 3GJ5 GDP 10.6383
463 5L3V GDP 10.6383
464 4GOX A3P 10.6383
465 4IDN GNP 10.6383
466 1X6V ADP 10.6383
467 4PSW COA 10.6383
468 2I4I AMP 10.6383
469 3Q85 GNP 10.6509
470 6FA4 GNP 10.9827
471 1XEX ATP 11.0465
472 4DKX GDP 11.1702
473 5LEF GTP 11.1702
474 4XOI GTP 11.1702
475 3T34 GDP 11.1702
476 2EFE GNH 11.1702
477 5L3W GDP 11.1702
478 1RRC ADP 11.1702
479 5L3S GNP 11.1702
480 1Z6T ADP 11.1702
481 3GD8 GOL 11.1702
482 4YRY FAD 11.1702
483 5WLB GNP 11.4458
484 2C5L GTP 11.5607
485 4K81 GTP 11.6959
486 1G7S GDP 11.7021
487 5UPK GNP 11.7021
488 2W58 ADP 11.7021
489 4Q1A UDP 11.7021
490 4Q1A 2XZ 11.7021
491 1E2K TMC 11.7021
492 3E70 GDP 11.7021
493 5VHC BEF ADP 11.7021
494 2D2F ADP 11.7021
495 5UIV ADP 11.8943
496 5E95 GDP 11.9048
497 6D5J GNP 11.976
498 6BVJ GNP 11.976
499 6D5E GNP 11.976
500 6D56 GNP 11.976
501 6BVL GNP 11.976
502 6D59 GNP 11.976
503 6D5H GNP 11.976
504 6BVI GNP 11.976
505 6BVK GNP 11.976
506 6D5V GNP 11.976
507 6D5G GNP 11.976
508 1LFD GNP 11.976
509 6D5M GNP 11.976
510 6D5L GNP 11.976
511 6D55 GNP 11.976
512 6BVM GNP 11.976
513 3QF7 ANP 12
514 3KUD GDP 12.0482
515 1WQ1 GDP 12.0482
516 2UZI GTP 12.0482
517 1NVV GNP 12.0482
518 3DDC GNP 12.0482
519 1UAD GNP 12.1212
520 5OEC GDP 12.234
521 5YV5 ADP 12.234
522 1YQT ADP 12.234
523 3LOO B4P 12.234
524 6BC0 GSP 12.6667
525 1YRB GDP 12.766
526 3CPJ GDP 12.766
527 2EW1 GNP 12.766
528 2F9L GDP 12.766
529 3HU3 AGS 12.766
530 5IFS ADP 12.766
531 5MZN ADP 12.766
532 1QHG ATP 12.766
533 5K2M ADP 13.2075
534 1IWE IMP 13.2979
535 2V7Q ATP 13.2979
536 1W0J ADP 13.2979
537 2OG2 MLI 13.2979
538 2CK3 ANP 13.2979
539 2CK3 ADP 13.2979
540 2V7Q ADP 13.2979
541 3QKT ANP 13.2979
542 1W0J ADP BEF 13.2979
543 4ZKD GDP 13.8298
544 1P72 ADP 13.8298
545 4IHQ ADP 13.8298
546 2XTN GTP 13.8298
547 3MGB PAP 14.1066
548 5GOE GDP 14.3617
549 5JCZ GDP 14.3617
550 4KOT CE3 14.8148
551 5Y6N ADP 14.8936
552 1K6M AGS 14.8936
553 3RWO GDP 15.1351
554 1HTW ADP 15.1899
555 1W7J ADP BEF 15.2318
556 1G16 GDP 15.2941
557 3REF GDP 15.4255
558 4YDS ATP 15.4255
559 2WHX ADP 15.4255
560 4TL6 ANP 15.4255
561 1H65 GDP 15.4255
562 2JLR ANP 15.4255
563 1WF3 GNP 15.9574
564 5KUT GDP 15.9574
565 1B7T ADP 16.0256
566 1KK8 BEF ADP 16.2338
567 4BQS ADP 16.4773
568 4BQS K2Q 16.4773
569 3WYF GTP 16.4894
570 3M1I GTP 16.4894
571 3DEF GDP 16.4894
572 3V2U ATP 16.4894
573 3KTA AP5 16.763
574 2HV8 GTP 16.8605
575 5SZH GNP 16.9935
576 3CNL GNP 17.0213
577 2ODE ALF GDP 17.0213
578 5IRR GSP 17.0213
579 1NY5 ADP 17.0213
580 2D7C GTP 17.3653
581 6G14 G4P 17.5532
582 3H4S ADP 17.5532
583 4FRZ ADP 17.5532
584 1F2U ATP 17.5676
585 1JQI CAA 18.0851
586 3ZS9 ADP ALF 18.4211
587 5H7J GCP 18.617
588 5H7K GDP 18.617
589 5KK4 44E 18.75
590 1GOT GDP 19.1781
591 3R35 4CO 19.2053
592 3VMF GTP 19.6809
593 3WXM GTP 19.6809
594 1G7C 5GP 19.6809
595 4YC7 GNP 19.6809
596 5BN3 ADP 20.2128
597 1SKQ GDP 20.7447
598 4KVG GTP 20.8333
599 2A2C NG1 21.2766
600 2A2C ADP 21.2766
601 1FQJ GDP 21.4286
602 3T5G GDP 21.547
603 1BH2 GSP 21.8085
604 3EC1 GDP 21.8085
605 4GOJ GNP 21.8085
606 4ZI2 GNP 21.8085
607 6BSX GDP 21.9101
608 6BSX E7S 21.9101
609 1SVI GDP 22.3404
610 5HCN GCP 22.3404
611 3VX3 ADP 22.3404
612 4DID GDP 22.3684
613 1FZQ GDP 22.6519
614 2QTV GNP 22.7545
615 3NTD FAD 22.8723
616 1GUA GNP 23.3533
617 4HDO GNP 23.3533
618 4HDQ GNP 23.3533
619 3X1Z GNP 23.3533
620 1LVG ADP 23.4043
621 1GP2 GDP 23.9362
622 5KDO GDP 23.9362
623 1SVK ALF GDP 23.9362
624 6DEF GCP 23.9362
625 1I4D GDP 24.4681
626 6C0B MLI 24.4681
627 1TU3 GNP 25.3165
628 1D2E GDP 25.5319
629 3WYA GDP 26.0638
630 4J0Q GDP 26.0638
631 3U6B GDP 26.0638
632 3WY9 GDP 26.0638
633 3U6K GDP 26.0638
634 5JBQ GDP 26.0638
635 4G5G GDP 26.0638
636 4P3Y GDP 26.0638
637 1D8T GDP 26.0638
638 5W75 GDP 26.0638
639 2BVN GNP 26.0638
640 4PC3 GDP 26.0638
641 5W7Q GDP 26.5957
642 1VKJ A3P 26.5957
643 5WDR GNP 26.9006
644 1PUJ GNP 27.1277
645 4D0G GTP 27.5362
646 5W76 GDP 27.6596
647 2C77 GNP 27.6596
648 2C78 GNP 27.6596
649 2GJ8 ALF GDP 27.907
650 2X77 GDP 28.7234
651 3PCR GTP 29.0123
652 2A5F GTP 29.7143
653 3DOE GTP 30.3191
654 1KSH GDP 30.6452
655 5DI3 GNP 31.3514
656 1MKY GDP 31.383
657 2G77 GDP 31.383
658 3N5C GDP 31.4815
659 2W83 GTP 31.5152
660 4KAX GTP 31.9527
661 4TMZ GSP 32.4468
662 4NCN GTP 32.9787
663 1RJW ETF 32.9787
664 1D6Z HY1 32.9787
665 3AQ4 GDP 33.1522
666 2FH5 GTP 34.5745
667 4YLG GDP 34.6821
668 2J59 GTP 34.9398
669 2HCJ GDP 35.1351
670 4DCT GDP 36.1702
671 2E0N SAH 37.766
672 1UPT GTP 38.0117
673 5DI9 GNP 38.0952
674 5EE5 GTP 38.5965
675 4B47 GDP 38.8298
676 5M04 GDP 38.8298
677 3PQC GDP 39.3617
678 1X1R GDP 39.8876
679 1CLU DBG 40.3614
680 4V0K GDP 41.4201
681 4H1V GNP 41.4894
682 2CJW GDP 42.0213
683 2HT6 GDP 42.5287
684 2RCN GDP 43.0851
685 3Q72 GNP 45.1807
Pocket No.: 2; Query (leader) PDB : 2WJG; Ligand: GDP; Similar sites found with APoc: 43
This union binding pocket(no: 2) in the query (biounit: 2wjg.bio1) has 15 residues
No: Leader PDB Ligand Sequence Similarity
1 2JDC CAO None
2 4R3L COA None
3 6APV 3L4 1.59574
4 5HH0 COA 1.59574
5 1QSN COA 1.85185
6 3D2M COA 2.12766
7 3ZJ0 ACO 2.12766
8 5HGZ ACO 3.19149
9 2WPW ACO 3.19149
10 5H86 BCO 3.57143
11 3GE7 AFQ 3.7234
12 5LTJ BEF 4.25532
13 5KOX RFP 4.25532
14 5KOX FAD 4.25532
15 2ZPA ACO 4.25532
16 1JV1 UD1 4.78723
17 1E5D FMN 4.78723
18 1S7N COA 4.94506
19 1W78 PD8 5.21327
20 2B4D COA 5.26316
21 5B48 TDN 5.31915
22 4DPL NAP 5.85106
23 3GD4 FAD 6.38298
24 3WR7 COA 7.05882
25 5LS7 ACO 7.29927
26 4XTX 590 7.97872
27 1RKD ADP 9.04255
28 1RKD RIB 9.04255
29 1BOB ACO 10.6383
30 2WW4 ADP 11.1702
31 1HV9 UD1 11.1702
32 3ABI NAD 11.1702
33 4AVB ACO 11.1702
34 5L3S G 11.1702
35 1T9D P22 11.7021
36 2V2V V12 12.234
37 5UY8 8UM 13.2979
38 5UY8 AMZ 13.2979
39 4MXP DB4 14.3617
40 5G5G FAD 14.8936
41 2PZ8 APC 17.5532
42 5KF9 ACO 18.0851
43 4JLS 3ZE 18.4211
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