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Receptor
PDB id Resolution Class Description Source Keywords
2WCV 1.9 Å EC: 5.1.3.- CRYSTAL STRUCTURE OF BACTERIAL FUCU ESCHERICHIA COLI RIBOSE PYRANASE ISOMERASE FUCOSE METABOLISM
Ref.: CRYSTAL STRUCTURES AND ENZYME MECHANISM OF A DUAL FUCOSE MUTAROTASE/RIBOSE PYRANASE J.MOL.BIOL. V. 391 178 2009
Ligand
Ligand Chain:Residue Validity Ligand Warnings Binding Data NGL Viewer Molecular Weight (Da) Formula SMILES
FUC A:1141;
B:1141;
C:1141;
D:1141;
E:1141;
F:1141;
G:1141;
H:1141;
I:1141;
J:1141;
Valid;
Valid;
Valid;
Valid;
Valid;
Valid;
Valid;
Valid;
Valid;
Valid;
none;
none;
none;
none;
none;
none;
none;
none;
none;
none;
Kd = 1.7 mM
164.156 C6 H12 O5 C[C@H...
View in 3D viewer
90% Homology Family
Leader
PDB id Resolution Class Description Source Keywords
2WCV 1.9 Å EC: 5.1.3.- CRYSTAL STRUCTURE OF BACTERIAL FUCU ESCHERICHIA COLI RIBOSE PYRANASE ISOMERASE FUCOSE METABOLISM
Ref.: CRYSTAL STRUCTURES AND ENZYME MECHANISM OF A DUAL FUCOSE MUTAROTASE/RIBOSE PYRANASE J.MOL.BIOL. V. 391 178 2009
Members (1)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 7 families.
1 2WCV Kd = 1.7 mM FUC C6 H12 O5 C[C@H]1[C@....
70% Homology Family (1)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 7 families.
1 2WCV Kd = 1.7 mM FUC C6 H12 O5 C[C@H]1[C@....
50% Homology Family (3)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 4 families.
1 2WCU - FUC C6 H12 O5 C[C@H]1[C@....
2 2WCV Kd = 1.7 mM FUC C6 H12 O5 C[C@H]1[C@....
3 4A34 - FUL C6 H12 O5 C[C@H]1[C@....
Polypharmacology
Similar Ligands
Ligand no: 1; Ligand: FUC; Similar ligands found: 9
No: Ligand ECFP6 Tc MDL keys Tc
1 FCB 1 1
2 FUC 1 1
3 FCA 1 1
4 XXR 1 1
5 G6D 1 1
6 RAM 1 1
7 RM4 1 1
8 FUL 1 1
9 FUF 0.424242 0.846154
Similar Binding Sites (Proteins are less than 50% similar to leader)
Pocket No.: 1; Query (leader) PDB : 2WCV; Ligand: FUC; Similar sites found with APoc: 36
This union binding pocket(no: 1) in the query (biounit: 2wcv.bio1) has 15 residues
No: Leader PDB Ligand Sequence Similarity
1 5N26 CPT None
2 1SBR VIB None
3 4RKK GLC GLC GLC GLC GLC GLC 1.42857
4 5C9P FUC 2.14286
5 2A2C ADP 3.57143
6 2A2C NG1 3.57143
7 2VWT PYR 3.57143
8 5YU3 NAD 3.57143
9 5YU3 PRO 3.57143
10 2YBQ UP2 3.57143
11 5X3R 7Y3 4.28571
12 4WEI GLC GAL 5
13 2X2T GAL NGA 5
14 1N62 FAD 5.71429
15 3EW2 BTN 5.92593
16 5T2Z 017 6.06061
17 1PVS 7HP 6.42857
18 3PMA SCR 7.85714
19 4KFU ACP 8.57143
20 5IDB BMA 8.57143
21 5IDB MAN 8.57143
22 3CEV ARG 9.28571
23 5Z54 0HZ 9.28571
24 1XRO LEU 10
25 3P13 RIP 12.1429
26 1EU1 MGD 12.1429
27 2J0W ASP 12.8571
28 2C42 PYR 13.5714
29 2C42 TPP 13.5714
30 5M1Z 6LW AHR 15
31 1T0S BML 15.1163
32 2GN2 C5P 15.7143
33 2VN9 GVD 19.2857
34 4R3U 3KK 20.7143
35 4R3U 3HC 20.7143
36 1OGD RIP 48.855
Pocket No.: 2; Query (leader) PDB : 2WCV; Ligand: FUC; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 2) in the query (biounit: 2wcv.bio1) has 15 residues
No: Leader PDB Ligand Sequence Similarity
Pocket No.: 3; Query (leader) PDB : 2WCV; Ligand: FUC; Similar sites found with APoc: 28
This union binding pocket(no: 3) in the query (biounit: 2wcv.bio1) has 15 residues
No: Leader PDB Ligand Sequence Similarity
1 3AJ6 NGA None
2 2ZQO NGA None
3 3FB4 AP5 2.14286
4 2VMG MBG 3.57143
5 1B09 PC 3.57143
6 5F90 LMR 3.57143
7 5UQD AKG 4.28571
8 4ORR PE3 5
9 3T7V MD0 5
10 4UDK BMA 5.71429
11 5GVL GI8 6.42857
12 5GVL PLG 6.42857
13 5AK0 8V1 6.42857
14 1YRO UDP 6.50407
15 4R2I ANP 7.14286
16 2I7C AAT 7.14286
17 2CNE DFJ 8.57143
18 5NC9 8SZ 10
19 5N1P 8GK 10
20 4L9Z OXL 11.4286
21 5TCI 79V 13.5714
22 2ZO9 MLI 14.2857
23 5UWU GNP 15
24 5UWH GNP 15
25 1WUU ANP 15.7143
26 1EGD FAD 17.1429
27 3WYG GTP 18.4211
28 3RWO GDP 20.7143
Pocket No.: 4; Query (leader) PDB : 2WCV; Ligand: FUC; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 4) in the query (biounit: 2wcv.bio1) has 15 residues
No: Leader PDB Ligand Sequence Similarity
Pocket No.: 5; Query (leader) PDB : 2WCV; Ligand: FUC; Similar sites found with APoc: 33
This union binding pocket(no: 5) in the query (biounit: 2wcv.bio1) has 15 residues
No: Leader PDB Ligand Sequence Similarity
1 4X8O AP5 None
2 2ZB4 NAP None
3 2ZB4 5OP None
4 3MJY FMN 1.42857
5 3MJY IJZ 1.42857
6 4Z28 BTN 1.49254
7 4MKF AP5 2.14286
8 4A91 GLU 2.85714
9 2BIF SIN 2.85714
10 2BIF ANP 2.85714
11 2ZB3 NDP 3.39943
12 1PMO PLR 3.57143
13 2DQU CPD 3.57143
14 3C3N FMN 4.28571
15 5XFV FMN 4.28571
16 1XPM HMG 5
17 5G3Y ADP 5
18 5B2E MQG 5
19 5GVR LMR 5.71429
20 1PS9 FMN 9.28571
21 3B1Q NOS 9.28571
22 2DM6 NAP 9.28571
23 4WZH FMN 9.28571
24 5GSN FAD 10
25 4YSX EPH 11.4286
26 4B7X NAP 12.1429
27 1YKD CMP 12.1429
28 3U7Q HCA 13.5714
29 6CUZ FEV 15
30 1OLS TDP 16.4286
31 3OIX FMN 16.4286
32 1UJ2 C5P 18.5714
33 1UJ2 ADP 18.5714
Pocket No.: 6; Query (leader) PDB : 2WCV; Ligand: FUC; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 6) in the query (biounit: 2wcv.bio1) has 15 residues
No: Leader PDB Ligand Sequence Similarity
Pocket No.: 7; Query (leader) PDB : 2WCV; Ligand: FUC; Similar sites found with APoc: 28
This union binding pocket(no: 7) in the query (biounit: 2wcv.bio1) has 15 residues
No: Leader PDB Ligand Sequence Similarity
1 4NU0 AP5 None
2 2PZE ATP None
3 5XG5 A2G None
4 2WA4 069 1.42857
5 1H2K OGA 1.42857
6 4G86 BNT 2.14286
7 4MKG AP5 2.85714
8 5F90 GLA GAL 3.57143
9 4WZ6 ATP 3.57143
10 2PFZ PCA 4.28571
11 5CAD PCA 4.28571
12 4ZW3 4S9 5
13 6IS0 SAH 5
14 1NU4 MLA 5.15464
15 1AKY AP5 5.71429
16 5W99 A1V 5.71429
17 3ROE THM 6.42857
18 5LGA 6VH 7.85714
19 1OVD FMN 9.28571
20 1OVD ORO 9.28571
21 5DK4 ATP 10
22 5DK4 5BX 10
23 2F2U M77 10
24 3T58 FAD 11.4286
25 5L3S G 15
26 1S3G AP5 20
27 1T8U UAP SGN IDS SGN 21.4286
28 2V7O DRN 21.4286
Pocket No.: 8; Query (leader) PDB : 2WCV; Ligand: FUC; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 8) in the query (biounit: 2wcv.bio1) has 15 residues
No: Leader PDB Ligand Sequence Similarity
Pocket No.: 9; Query (leader) PDB : 2WCV; Ligand: FUC; Similar sites found with APoc: 1
This union binding pocket(no: 9) in the query (biounit: 2wcv.bio1) has 15 residues
No: Leader PDB Ligand Sequence Similarity
1 2Y65 ADP 8.57143
Pocket No.: 10; Query (leader) PDB : 2WCV; Ligand: FUC; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 10) in the query (biounit: 2wcv.bio1) has 15 residues
No: Leader PDB Ligand Sequence Similarity
Pocket No.: 11; Query (leader) PDB : 2WCV; Ligand: FUC; Similar sites found with APoc: 9
This union binding pocket(no: 11) in the query (biounit: 2wcv.bio2) has 15 residues
No: Leader PDB Ligand Sequence Similarity
1 4INW 1EY None
2 2Y0I AKG 1.42857
3 4NZF ARB 3.57143
4 1RM6 FAD 4.28571
5 4NW6 2NS 5.71429
6 2Q7D ANP 6.42857
7 4I4S LAT 7.14286
8 6CEP NAD 7.85714
9 6CEP OXM 7.85714
Pocket No.: 12; Query (leader) PDB : 2WCV; Ligand: FUC; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 12) in the query (biounit: 2wcv.bio2) has 15 residues
No: Leader PDB Ligand Sequence Similarity
Pocket No.: 13; Query (leader) PDB : 2WCV; Ligand: FUC; Similar sites found with APoc: 8
This union binding pocket(no: 13) in the query (biounit: 2wcv.bio2) has 16 residues
No: Leader PDB Ligand Sequence Similarity
1 1QNR MAB None
2 3H78 BE2 5
3 5A5W GUO 5
4 5FBN 5WF 7.14286
5 4XSU GLC 7.85714
6 4XSU UDP 7.85714
7 5EXE 5SR 7.85714
8 2P1E LAC 7.85714
Pocket No.: 14; Query (leader) PDB : 2WCV; Ligand: FUC; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 14) in the query (biounit: 2wcv.bio2) has 16 residues
No: Leader PDB Ligand Sequence Similarity
Pocket No.: 15; Query (leader) PDB : 2WCV; Ligand: FUC; Similar sites found with APoc: 7
This union binding pocket(no: 15) in the query (biounit: 2wcv.bio2) has 15 residues
No: Leader PDB Ligand Sequence Similarity
1 5JNN 6LM 4.28571
2 1IR3 ANP 4.28571
3 2VVL FAD 5
4 3TTI KBI 5.71429
5 2FXD DR7 6.06061
6 2ZRU FMN 13.5714
7 1T36 ADP 21.4286
Pocket No.: 16; Query (leader) PDB : 2WCV; Ligand: FUC; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 16) in the query (biounit: 2wcv.bio2) has 15 residues
No: Leader PDB Ligand Sequence Similarity
Pocket No.: 17; Query (leader) PDB : 2WCV; Ligand: FUC; Similar sites found with APoc: 10
This union binding pocket(no: 17) in the query (biounit: 2wcv.bio2) has 14 residues
No: Leader PDB Ligand Sequence Similarity
1 6HDT BTN None
2 5KKB BMA NAG MAN MAN MAN MAN MAN MAN MAN 3.57143
3 4R57 ACO 3.57143
4 4IO2 GLU 4.28571
5 2VVM FAD 5
6 1N5D NDP 8.57143
7 3CX5 SMA 10
8 3CXH SMA 10
9 2A06 SMA 15.4545
10 5Y72 DST 15.7143
Pocket No.: 18; Query (leader) PDB : 2WCV; Ligand: FUC; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 18) in the query (biounit: 2wcv.bio2) has 14 residues
No: Leader PDB Ligand Sequence Similarity
Pocket No.: 19; Query (leader) PDB : 2WCV; Ligand: FUC; Similar sites found with APoc: 3
This union binding pocket(no: 19) in the query (biounit: 2wcv.bio2) has 16 residues
No: Leader PDB Ligand Sequence Similarity
1 1KKR 2AS 4.28571
2 1QFT HSM 5
3 5D63 FUC GLA GLA 5
Pocket No.: 20; Query (leader) PDB : 2WCV; Ligand: FUC; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 20) in the query (biounit: 2wcv.bio2) has 16 residues
No: Leader PDB Ligand Sequence Similarity
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