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Receptor
PDB id Resolution Class Description Source Keywords
2VUT 2.3 Å NON-ENZYME: TRANSCRIPT_TRANSLATE CRYSTAL STRUCTURE OF NAD-BOUND NMRA-AREA ZINC FINGER COMPLEX EMERICELLA NIDULANS TRANSCRIPTION REGULATION PROTEIN-PROTEIN INTERACTIONS METAL-BINDING NITRATE ASSIMILATION ZINC-FINGER DNA-BINDING ZINC FINGERS TRANSCRIPTION ZINC AREA NMRA NUCLEUS ACTIVATOR GATA-TYPE
Ref.: STRUCTURAL ANALYSIS OF THE RECOGNITION OF THE NEGATIVE REGULATOR NMRA AND DNA BY THE ZINC FINGER FROM THE GATA-TYPE TRANSCRIPTION FACTOR AREA. J.MOL.BIOL. V. 381 373 2008
Ligand
Ligand Chain:Residue Validity Ligand Warnings Binding Data NGL Viewer Molecular Weight (Da) Formula SMILES
CL A:1354;
C:1354;
D:1353;
E:1353;
F:1353;
G:1354;
H:1353;
Invalid;
Invalid;
Invalid;
Invalid;
Invalid;
Invalid;
Invalid;
none;
none;
none;
none;
none;
none;
none;
submit data
35.453 Cl [Cl-]
GOL C:1353;
G:1353;
M:1712;
Invalid;
Invalid;
Invalid;
none;
none;
none;
submit data
92.094 C3 H8 O3 C(C(C...
NAD A:1353;
B:1353;
C:1355;
D:1354;
E:1354;
F:1354;
G:1355;
H:1354;
Valid;
Valid;
Valid;
Valid;
Valid;
Valid;
Valid;
Valid;
none;
none;
none;
none;
none;
none;
none;
none;
submit data
663.425 C21 H27 N7 O14 P2 c1cc(...
ZN I:1713;
J:1713;
K:1712;
L:1713;
M:1713;
N:1713;
O:1712;
P:1713;
Part of Protein;
Part of Protein;
Part of Protein;
Part of Protein;
Part of Protein;
Part of Protein;
Part of Protein;
Part of Protein;
none;
none;
none;
none;
none;
none;
none;
none;
submit data
65.409 Zn [Zn+2...
View in 3D viewer
90% Homology Family
Leader
PDB id Resolution Class Description Source Keywords
2VUT 2.3 Å NON-ENZYME: TRANSCRIPT_TRANSLATE CRYSTAL STRUCTURE OF NAD-BOUND NMRA-AREA ZINC FINGER COMPLEX EMERICELLA NIDULANS TRANSCRIPTION REGULATION PROTEIN-PROTEIN INTERACTIONS METAL-BINDING NITRATE ASSIMILATION ZINC-FINGER DNA-BINDING ZINC FINGERS TRANSCRIPTION ZINC AREA NMRA NUCLEUS ACTIVATOR GATA-TYPE
Ref.: STRUCTURAL ANALYSIS OF THE RECOGNITION OF THE NEGATIVE REGULATOR NMRA AND DNA BY THE ZINC FINGER FROM THE GATA-TYPE TRANSCRIPTION FACTOR AREA. J.MOL.BIOL. V. 381 373 2008
Members (1)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 291 families.
1 2VUT - NAD C21 H27 N7 O14 P2 c1cc(c[n+]....
70% Homology Family (1)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 247 families.
1 2VUT - NAD C21 H27 N7 O14 P2 c1cc(c[n+]....
50% Homology Family (1)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 209 families.
1 2VUT - NAD C21 H27 N7 O14 P2 c1cc(c[n+]....
Polypharmacology
Similar Ligands
Ligand no: 1; Ligand: NAD; Similar ligands found: 230
No: Ligand ECFP6 Tc MDL keys Tc
1 A3D 0.872727 0.986111
2 NHD 0.821429 0.972222
3 NAP 0.811966 0.986111
4 NFD 0.791304 0.946667
5 NXX 0.765766 0.972603
6 DND 0.765766 0.972603
7 AMP NAD 0.74359 0.972222
8 ZID 0.737705 0.986111
9 NAQ 0.729508 0.934211
10 NAE 0.721311 0.959459
11 NA0 0.712 0.972603
12 TAP 0.704 0.921053
13 NDE 0.689922 0.972603
14 NAJ 0.683333 0.972222
15 NDC 0.679389 0.934211
16 NDO 0.674603 0.958904
17 N01 0.656 0.972222
18 CNA 0.642276 0.972603
19 NBP 0.621212 0.922078
20 8ID 0.609756 0.922078
21 A2D 0.576923 0.958333
22 ADP 0.575472 0.931507
23 NGD 0.574803 0.922078
24 BA3 0.566038 0.958333
25 M33 0.564815 0.918919
26 ADP PO3 0.563636 0.957747
27 B4P 0.560748 0.958333
28 AP5 0.560748 0.958333
29 AN2 0.555556 0.918919
30 AT4 0.555556 0.894737
31 GAP 0.553571 0.932432
32 OOB 0.551724 0.972222
33 CA0 0.550459 0.932432
34 9JJ 0.546053 0.898734
35 HEJ 0.545455 0.931507
36 ACP 0.545455 0.906667
37 ATP 0.545455 0.931507
38 DQV 0.544 0.972222
39 ADP ALF 0.54386 0.883117
40 ALF ADP 0.54386 0.883117
41 DAL AMP 0.543103 0.945205
42 APR 0.540541 0.931507
43 AQP 0.540541 0.931507
44 AR6 0.540541 0.931507
45 5FA 0.540541 0.931507
46 ADP VO4 0.53913 0.945205
47 VO4 ADP 0.53913 0.945205
48 AD9 0.535714 0.906667
49 SAP 0.535714 0.883117
50 AGS 0.535714 0.883117
51 WAQ 0.533333 0.896104
52 ABM 0.53271 0.905405
53 DLL 0.529412 0.972222
54 00A 0.529412 0.921053
55 ACQ 0.526316 0.906667
56 NJP 0.526316 0.959459
57 ANP 0.526316 0.906667
58 OAD 0.525 0.932432
59 ADX 0.522523 0.839506
60 5AL 0.521739 0.945205
61 A1R 0.521008 0.871795
62 9SN 0.520325 0.909091
63 A 0.518868 0.930556
64 AMP 0.518868 0.930556
65 50T 0.517857 0.893333
66 ATF 0.517241 0.894737
67 1ZZ 0.516393 0.851852
68 3OD 0.516393 0.932432
69 SON 0.513514 0.92
70 PRX 0.513274 0.881579
71 6YZ 0.512821 0.906667
72 SRP 0.512821 0.92
73 9X8 0.512397 0.883117
74 ADP BMA 0.512397 0.932432
75 3UK 0.512397 0.958904
76 MYR AMP 0.512195 0.851852
77 NAJ PZO 0.510949 0.909091
78 NMN 0.509434 0.875
79 A3R 0.508333 0.871795
80 B5V 0.508197 0.945946
81 AMP DBH 0.507937 0.906667
82 A22 0.504202 0.945205
83 ATP A A A 0.504 0.971831
84 B5M 0.504 0.933333
85 FA5 0.504 0.945946
86 8QN 0.5 0.945205
87 NAX 0.496183 0.886076
88 TYR AMP 0.496063 0.933333
89 PR8 0.495935 0.8625
90 AMO 0.495868 0.92
91 ADQ 0.495868 0.932432
92 4AD 0.495868 0.933333
93 PAJ 0.495868 0.873418
94 A12 0.495495 0.894737
95 AP2 0.495495 0.894737
96 AHZ 0.492308 0.851852
97 YAP 0.492063 0.933333
98 FYA 0.491935 0.918919
99 AHX 0.491803 0.884615
100 4UU 0.488372 0.933333
101 5SV 0.487603 0.8375
102 TAT 0.487179 0.894737
103 T99 0.487179 0.894737
104 APC 0.486957 0.894737
105 SRA 0.486239 0.881579
106 6V0 0.484848 0.909091
107 NAI 0.484848 0.921053
108 GTA 0.484615 0.898734
109 A A 0.483871 0.958333
110 LAD 0.483871 0.873418
111 AU1 0.482456 0.906667
112 F2R 0.481752 0.831325
113 OMR 0.481203 0.841463
114 TXE 0.481203 0.921053
115 AF3 ADP 3PG 0.481203 0.873418
116 LAQ 0.480916 0.851852
117 G3A 0.48062 0.909091
118 B5Y 0.480315 0.933333
119 NB8 0.48 0.884615
120 TXA 0.48 0.92
121 BIS 0.48 0.871795
122 ME8 0.48 0.851852
123 PTJ 0.48 0.884615
124 139 0.477941 0.886076
125 LPA AMP 0.477273 0.851852
126 AFH 0.476923 0.873418
127 AR6 AR6 0.476923 0.958333
128 G5P 0.476923 0.909091
129 ARG AMP 0.476923 0.841463
130 25L 0.47619 0.945205
131 NAJ PYZ 0.475524 0.864198
132 25A 0.47541 0.958333
133 9ZA 0.47541 0.896104
134 9ZD 0.47541 0.896104
135 DZD 0.47482 0.897436
136 TXD 0.473684 0.921053
137 4UV 0.472868 0.933333
138 TYM 0.470149 0.945946
139 RBY 0.470085 0.894737
140 ADV 0.470085 0.894737
141 4TA 0.467626 0.864198
142 48N 0.466165 0.884615
143 XAH 0.465116 0.851852
144 4UW 0.462687 0.897436
145 M24 0.461538 0.886076
146 80F 0.460993 0.853659
147 IOT 0.459854 0.821429
148 T5A 0.456522 0.853659
149 EAD 0.455782 0.886076
150 MAP 0.455285 0.883117
151 GA7 0.454545 0.894737
152 BT5 0.453901 0.821429
153 A4P 0.452555 0.833333
154 UP5 0.451852 0.933333
155 PAP 0.445378 0.917808
156 4TC 0.445255 0.909091
157 AP0 0.445255 0.884615
158 YLP 0.444444 0.831325
159 P1H 0.443709 0.864198
160 AOC 0.442478 0.810811
161 Z5A 0.439189 0.833333
162 LMS 0.4375 0.817073
163 2A5 0.436975 0.857143
164 A G 0.43662 0.921053
165 G A A A 0.43662 0.909091
166 COD 0.43662 0.802326
167 ADJ 0.435714 0.841463
168 YLB 0.434783 0.831325
169 YLC 0.434783 0.851852
170 U A G G 0.433566 0.921053
171 ATR 0.433333 0.90411
172 7MD 0.432836 0.851852
173 8X1 0.432 0.764045
174 G5A 0.429752 0.790698
175 PO4 PO4 A A A A PO4 0.429688 0.943662
176 TAD 0.42963 0.873418
177 5AS 0.42735 0.770115
178 BTX 0.426573 0.831325
179 YLA 0.425532 0.831325
180 DSZ 0.425197 0.790698
181 NCN 0.424779 0.805556
182 UPA 0.42446 0.921053
183 8PZ 0.424242 0.811765
184 VMS 0.424 0.8
185 54H 0.424 0.8
186 9K8 0.423077 0.744444
187 N0B 0.422819 0.853659
188 6AD 0.422764 0.85
189 AYB 0.422535 0.821429
190 7D3 0.422414 0.844156
191 YLY 0.421769 0.821429
192 TSB 0.420635 0.809524
193 ODP 0.41958 0.922078
194 AV2 0.419355 0.855263
195 FB0 0.419355 0.775281
196 A5A 0.419355 0.819277
197 NNR 0.419048 0.739726
198 A A A 0.418605 0.918919
199 U A 0.417808 0.946667
200 649 0.417266 0.775281
201 NMN AMP PO4 0.416667 0.933333
202 SSA 0.416 0.790698
203 P5A 0.415385 0.755556
204 LSS 0.414062 0.772727
205 A2R 0.412698 0.918919
206 52H 0.412698 0.790698
207 JB6 0.412214 0.896104
208 5N5 0.411215 0.783784
209 YSA 0.410448 0.811765
210 53H 0.409449 0.790698
211 5CA 0.409449 0.790698
212 ITT 0.408333 0.878378
213 7D4 0.408333 0.844156
214 NA7 0.407692 0.894737
215 LEU LMS 0.407692 0.784091
216 5CD 0.407407 0.794521
217 0WD 0.406897 0.909091
218 A3P 0.40678 0.930556
219 HFD 0.406504 0.883117
220 AVV 0.40625 0.860759
221 RAB 0.40566 0.808219
222 XYA 0.40566 0.808219
223 ADN 0.40566 0.808219
224 FDA 0.405063 0.823529
225 GSU 0.40458 0.790698
226 7MC 0.404255 0.831325
227 NSS 0.403101 0.811765
228 6FA 0.402516 0.853659
229 PPS 0.4 0.817073
230 NVA LMS 0.4 0.784091
Similar Binding Sites (Proteins are less than 50% similar to leader)
Pocket No.: 1; Query (leader) PDB : 2VUT; Ligand: NAD; Similar sites found with APoc: 362
This union binding pocket(no: 1) in the query (biounit: 2vut.bio1) has 23 residues
No: Leader PDB Ligand Sequence Similarity
1 5KK4 44E None
2 1XKQ NDP 1.07143
3 4TQG NDP 1.23839
4 5O98 NAP 1.57729
5 1XSE NDP 1.69492
6 4XFR CIT 1.70455
7 1A27 NAP 1.7301
8 3CH6 NAP 1.74825
9 3CH6 311 1.74825
10 1SNY NAP 1.87266
11 3A4V NAD 1.89274
12 3A4V PYR 1.89274
13 4NBW NAD 1.94553
14 1GR0 NAD 1.98864
15 2C5A NAD 1.98864
16 2C5A GDC 1.98864
17 1C3V NDP 2.04082
18 1IZC PYR 2.0649
19 6CEP OXM 2.09581
20 6CEP NAD 2.09581
21 1XG5 NAP 2.15054
22 5G4L NDP 2.27273
23 2AWN ADP 2.27273
24 4KWI 1TJ 2.28137
25 4KWI NAP 2.28137
26 2XMY CDK 2.34899
27 4FN4 NAD 2.3622
28 2WSB NAD 2.3622
29 4ZVV GN0 2.40964
30 4ZVV NAD 2.40964
31 2JAH NDP 2.42915
32 2JAP NDP 2.42915
33 4J7U YTZ 2.43056
34 4J7U NAP 2.43056
35 5Z2L NDP 2.44898
36 1Z6Z NAP 2.48227
37 5GWT SIN 2.51799
38 5GWT NAD 2.51799
39 1BDB NAD 2.52708
40 4NZ6 DLY 2.55591
41 1U1I NAD 2.55682
42 1Y1P NMN AMP PO4 2.63158
43 1ZEM NAD 2.67176
44 2AE2 PTO 2.69231
45 2AE2 NAP 2.69231
46 6CI9 NAP 2.7027
47 5FFF NAP 2.72374
48 5FFF 5XC 2.72374
49 3RJ5 NAD 2.75591
50 1T26 GBD 2.79503
51 1T26 NAI 2.79503
52 5UAV TFB 2.79503
53 5UAV NDP 2.79503
54 4D42 W0I 2.83688
55 4D42 NAP 2.83688
56 2J5V PCA 2.84091
57 4ITU 1HS 2.84091
58 4ITU NAI 2.84091
59 2AG5 NAD 2.84553
60 1HDR NAD 2.86885
61 5EO8 TFU 2.89389
62 4RF2 NAP 2.94118
63 5X9D 80F 2.96053
64 4BVA NDP 2.98507
65 4Q9N NAI 3.02013
66 2PZE ATP 3.05677
67 1U7T NAD 3.06513
68 1U7T TDT 3.06513
69 3AFN NAP 3.10078
70 4OHU 2TK 3.11419
71 4OHU NAD 3.11419
72 4YAG NAI 3.11419
73 2BO4 FLC 3.125
74 3ICC NAP 3.13725
75 4QED NAP 3.22581
76 6BSW UDP 3.25444
77 5I7S E9P 3.26087
78 5I7S NAD 3.26087
79 1EDO NAP 3.27869
80 6F9Q NAD 3.30882
81 4PXE GLV 3.40909
82 5FEU NAP 3.40909
83 4PIV NDP 3.40909
84 1KSK URA 3.4188
85 1E3W NAD 3.44828
86 1E6W NAD 3.46154
87 3ORF NAD 3.58566
88 1ZBQ NAD 3.66972
89 1Q7B NAP 3.68852
90 2GSD NAD 3.69318
91 3RFV NAI 3.74532
92 3RFV 15L 3.74532
93 5NM7 GLY 3.7594
94 1G0N NDP 3.88693
95 1G0N PHH 3.88693
96 1FK8 NAD 3.89105
97 2GMM MAN MAN 3.96825
98 2GMP NAG MAN 3.96825
99 2RH4 EMO 3.97112
100 5MBX FAD 3.97727
101 5MBX SP5 3.97727
102 1MXH DHF 3.98551
103 1MXH NAP 3.98551
104 1EK6 UPG 4.02299
105 1EK6 NAI 4.02299
106 2AJH MET 4.08163
107 2GDZ NAD 4.11985
108 4O1M NAD 4.12698
109 3OIG NAD 4.13534
110 5Z2F NAP 4.15094
111 4NBT NAD 4.16667
112 1V35 NAI 4.25532
113 5YSS NAD 4.29688
114 2PD4 NAD 4.36364
115 2PD4 DCN 4.36364
116 1ZK4 NAP 4.38247
117 1ZK4 AC0 4.38247
118 1GXU 2HP 4.3956
119 4ZRN UPG 4.48718
120 4ZRN NAD 4.48718
121 4OSP NAP 4.56274
122 3ZV6 4HB 4.62633
123 3ZV6 NAD 4.62633
124 5L4L NAP 4.65116
125 2DKN NAI 4.70588
126 2B4Q NAP 4.71014
127 3QWI CUE 4.81482
128 3QWI NAP 4.81482
129 2DTX BMA 4.92424
130 1E7S NAP 4.98442
131 3OJF IMJ 5.05837
132 3OJF NDP 5.05837
133 2VOH CIT 5.09554
134 1AE1 NAP 5.12821
135 2YY7 NAD 5.12821
136 4ZA2 NAD 5.13834
137 2D2F ADP 5.2
138 3SJU NDP 5.37634
139 3A28 NAD 5.42636
140 3TN7 NJP 5.44747
141 5THQ NDP 5.51471
142 5CG1 NAD BBN 5.57377
143 1SB8 UD2 5.68182
144 1SB8 NAD 5.68182
145 2VVL FAD 5.68182
146 5WUW NAP 5.92335
147 5ZMY TAR 6.05096
148 1D7O TCL 6.06061
149 1D7O NAD 6.06061
150 5EPO NAP 6.10687
151 2Q2V NAD 6.27451
152 5OVL NAP 6.33333
153 1VL8 NAP 6.36704
154 1XHL NDP 6.39731
155 2EWM NAD 6.4257
156 1QG6 NAD 6.51341
157 1QG6 TCL 6.51341
158 1WMA NDP 6.52174
159 1WMA AB3 6.52174
160 1ORR NAD 6.62824
161 3AY6 NAI 6.69145
162 3AY6 BGC 6.69145
163 1GEE NAD 6.89655
164 5OJI NAP 6.92308
165 5OJI ISN 6.92308
166 5XQL C2E 6.97674
167 2ZAT NAP 6.97674
168 4O0L NDP 6.97674
169 5MSO NAP 6.97674
170 4U7W NDP 6.97674
171 4PVD NDP 6.97674
172 1GY8 NAD 6.97674
173 1VKO NAD 6.97674
174 2BOI MFU 7.07965
175 5L4S NAP 7.2327
176 5L4S 6KX 7.2327
177 5OVK NDP 7.42188
178 3HB5 NAP 7.64526
179 1H5Q NAP 7.92453
180 2E5V FAD 8.23864
181 5K4W THR 8.41121
182 5K4W NAI 8.41121
183 3C1O NAP 8.41121
184 3FIU POP 8.43373
185 3D3W NAP 8.60656
186 1PR9 NAP 8.60656
187 2XZ9 PYR 8.64198
188 1GZ6 NAI 8.77743
189 2CFC NAD 8.8
190 3NUG NAD 8.90688
191 3VZS NAP 8.94942
192 3VZS CAA 8.94942
193 5ZEC NAP 9.06433
194 2GN4 UD1 9.30233
195 2GN4 NDP 9.30233
196 5DF1 NAP 9.30233
197 5DF1 58X 9.30233
198 3H4V NAP 9.30233
199 5XWV NDP 9.30233
200 3H4V DVP 9.30233
201 1I2B USQ 9.30233
202 1I2B UPG 9.30233
203 1I2B NAD 9.30233
204 5XWV 8H6 9.30233
205 6EL3 NAP 9.30233
206 2BD0 NAP 9.30233
207 5Y1G AKB 9.30233
208 5O42 BGC 9.30233
209 5O42 NAD 9.30233
210 5O42 9JW 9.30233
211 3FPZ AHZ 9.30233
212 1X1T NAD 9.30233
213 5Y1G NAD 9.30233
214 4AVB CMP 9.30233
215 1RM0 D6P 9.30233
216 4EUE NAI 9.30233
217 1RM0 NAI 9.30233
218 5B4T NAD 9.30233
219 5B4T 3HR 9.30233
220 1Q19 SSC 9.30233
221 1TKU 5RP 9.30233
222 2GZ3 NAP 9.30233
223 1VL0 NAI 9.30233
224 4CQM NAP 9.42623
225 2WPB ZZI 9.53947
226 1OC2 NAD 10.0575
227 1OC2 TDX 10.0575
228 5K6A NAP 10.0694
229 5JDC NAP 10.0694
230 5JCJ NAP 10.0694
231 3BMN NAP 10.0694
232 4CM9 NAP 10.0694
233 4CLO NAP 10.0694
234 3JQ7 NAP 10.0694
235 4CME NAP 10.0694
236 5JDI NAP 10.0694
237 4CMI NAP 10.0694
238 4CM8 NAP 10.0694
239 4CLR NAP 10.0694
240 3JQ8 NAP 10.0694
241 4CM4 NAP 10.0694
242 3JQF NAP 10.0694
243 3JQ9 NAP 10.0694
244 3BMO NAP 10.0694
245 3JQA NAP 10.0694
246 3BMQ NAP 10.0694
247 3JQB NAP 10.0694
248 3JQG NAP 10.0694
249 5T2U NAP 10.0806
250 2DC1 NAD 10.1695
251 3LU1 NAD 10.5114
252 1W73 NAP 10.9272
253 2Q1S NAI 11.1406
254 2VZ0 NAP 11.194
255 2VZ0 D64 11.194
256 2WD7 NAP 11.194
257 4NBU NAI 11.6
258 4DDY DN6 11.6279
259 4R1S NAP 11.6279
260 5WQP NAP 11.6279
261 4K26 SFF 11.6279
262 5WQP NCA 11.6279
263 5ZI9 FLC 11.6279
264 4K26 NDP 11.6279
265 5EJ2 NAD 11.6279
266 2PZM UDP 11.6279
267 2PZM NAD 11.6279
268 5A1T NAI 11.6279
269 2VTD LKM 11.6279
270 4PLT NAI 11.6279
271 4PLT OXM 11.6279
272 2FR1 NDP 11.6279
273 1NNU TCT 11.6667
274 1NNU NAD 11.6667
275 3GGO NAI 12.4204
276 3GGO ENO 12.4204
277 3I6I NDP 13.0058
278 3OCP CMP 13.6691
279 4HXY NDP 13.9269
280 5E5U MLI 13.9535
281 2BGM NAJ 13.9535
282 3O26 NDP 13.9535
283 3WXB NDP 13.9535
284 3ITJ CIT 13.9535
285 4J1Q NDP 13.9535
286 5GT9 NAP 13.9535
287 3WMX NAD 13.9535
288 4FC7 NAP 13.9535
289 4FC7 COA 13.9535
290 1KEW TYD 13.9535
291 1KEW NAD 13.9535
292 6DNT NAD 13.9535
293 3OID NDP 13.9535
294 3KO8 NAD 13.9535
295 2P39 SCR 13.9535
296 1A99 PUT 13.9535
297 3CV2 OXL 13.9535
298 2WR9 MAN MAN 14.0625
299 1R6D DAU 14.2433
300 1R6D NAD 14.2433
301 1IY8 NAD 15.3558
302 4URF 1PS 16.2791
303 1OAA OAA 16.2791
304 4G5H UD7 16.2791
305 4G5H NAP 16.2791
306 5OOH 9ZZ 16.2791
307 5OOH NAP 16.2791
308 4XB2 NDP 16.2791
309 4XB2 HSE 16.2791
310 3SJ7 NDP 16.2791
311 1CT9 AMP 16.2791
312 4URF NAD 16.2791
313 5DZT AMP 16.2791
314 4KVL PLM 16.2791
315 2NAD NAD 16.2791
316 2Q1W NAD 16.5165
317 4NTO 1PW 16.9082
318 2Q46 NAP 17.3913
319 1JA9 NDP 17.8832
320 3U4C NDP 18.6047
321 1RPN NDP 18.6047
322 5Z75 NAD 18.6047
323 5BJX NAD 18.6047
324 5BJX UDP 18.6047
325 5YB7 FAD 18.6047
326 4XQC NAD 18.6047
327 4XQC 13D 18.6047
328 5YB7 ORN 18.6047
329 1BXK NAD 18.6047
330 1RSG FAD 18.6047
331 1YY5 FAD 18.6047
332 5IN4 6CK 20.9302
333 5IN4 GDP 20.9302
334 5IN4 NAP 20.9302
335 5MLR NAP 20.9302
336 5MLR GRQ 20.9302
337 5A96 GTP 20.9302
338 3O9Z NAD 20.9302
339 1WPQ 13P 20.9302
340 3O9Z AKG 20.9302
341 5EIN NAP 20.9302
342 4DPL NAP 20.9302
343 1N7G GDR 23.2558
344 1N7G NDP 23.2558
345 2V6G NAP 23.2558
346 1UDB NAD 23.2558
347 1UDB UFG 23.2558
348 2C29 NAP 25.5814
349 1NFQ NAI 25.5814
350 4GUT FAD 25.5814
351 4HSU FAD 25.5814
352 4GUS FAD 25.5814
353 2C29 DQH 25.5814
354 4FWE FAD 25.5814
355 1GEG NAD 30.2326
356 2EXX NAP 32.0261
357 4IV9 FAD 34.8837
358 1RKX NAD 34.8837
359 5F5N NAD 35.2941
360 2QZZ NAP 35.5346
361 2QZZ EMF 35.5346
362 2WYV NAD 41.8605
Pocket No.: 2; Query (leader) PDB : 2VUT; Ligand: NAD; Similar sites found with APoc: 6
This union binding pocket(no: 2) in the query (biounit: 2vut.bio15) has 22 residues
No: Leader PDB Ligand Sequence Similarity
1 2C91 TLA 1.77515
2 3GEG NAD 3.64372
3 5E58 CPZ 3.97727
4 1NSA BEN 4.54545
5 4Y7E BMA BMA BMA 6.97674
6 4A34 FUL 14.966
Pocket No.: 3; Query (leader) PDB : 2VUT; Ligand: NAD; Similar sites found with APoc: 5
This union binding pocket(no: 3) in the query (biounit: 2vut.bio11) has 22 residues
No: Leader PDB Ligand Sequence Similarity
1 1Q9I TEO 3.40909
2 1Q9I FAD 3.40909
3 3LEK BCW 3.92157
4 3DOO SKM 7.94224
5 2EV9 SKM 11.6279
Pocket No.: 4; Query (leader) PDB : 2VUT; Ligand: NAD; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 4) in the query (biounit: 2vut.bio3) has 22 residues
No: Leader PDB Ligand Sequence Similarity
Pocket No.: 5; Query (leader) PDB : 2VUT; Ligand: NAD; Similar sites found with APoc: 17
This union binding pocket(no: 5) in the query (biounit: 2vut.bio13) has 23 residues
No: Leader PDB Ligand Sequence Similarity
1 1OS7 TAU 1.76678
2 1UXG NAD 2.91262
3 1UXG FUM 2.91262
4 2VVM FAD 5.68182
5 5U5G NAP 5.76271
6 3B9Q MLI 6.29139
7 2OG2 MLI 7.67045
8 4XYB NDP 7.95455
9 5KBF CMP 10.299
10 1N5D NDP 11.6279
11 4DE3 DN8 11.6279
12 2WCU FUC 13.9535
13 2OVW CBI 13.9535
14 1OYF MHN 15.7025
15 1CY2 TMP 16.2791
16 4MOP 2H5 16.2791
17 5D63 FUC GLA GLA 23.2558
Pocket No.: 6; Query (leader) PDB : 2VUT; Ligand: NAD; Similar sites found with APoc: 17
This union binding pocket(no: 6) in the query (biounit: 2vut.bio10) has 23 residues
No: Leader PDB Ligand Sequence Similarity
1 2JB2 FAD 2.55682
2 2JB2 PHE 2.55682
3 6CGZ HL6 2.83688
4 2JBM SRT 3.01003
5 2BQP GLC 3.4188
6 5TDF ADE 3.97727
7 5JAX 6J7 4.44444
8 3EJ0 11X 4.59184
9 1KHT AMP 4.6875
10 1OFS SUC 8.33333
11 3X0V FAD 8.80682
12 6EOM ALA LYS 9.30233
13 5TSH ADP 9.30233
14 5TSH ANP 9.30233
15 5NUE NAD 10.5422
16 5A1T OXM 11.6279
17 2Z3Y F2N 18.6047
Pocket No.: 7; Query (leader) PDB : 2VUT; Ligand: NAD; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 7) in the query (biounit: 2vut.bio5) has 23 residues
No: Leader PDB Ligand Sequence Similarity
Pocket No.: 8; Query (leader) PDB : 2VUT; Ligand: NAD; Similar sites found with APoc: 13
This union binding pocket(no: 8) in the query (biounit: 2vut.bio12) has 23 residues
No: Leader PDB Ligand Sequence Similarity
1 1LDN NAD 2.21519
2 5CAE SIN 3.69318
3 5J3R GSH 3.94089
4 4WEI GLC GAL 4.69314
5 4GLL NAD 11.6279
6 1PZG A3D 11.6279
7 4PLG OXM 11.6279
8 4PLG NAI 11.6279
9 5E70 RCD 13.9535
10 4QEK GLC 13.9535
11 2F2H XTG 18.6047
12 3V1U NAD 23.2558
13 5M90 JIF 23.2558
Pocket No.: 9; Query (leader) PDB : 2VUT; Ligand: NAD; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 9) in the query (biounit: 2vut.bio7) has 22 residues
No: Leader PDB Ligand Sequence Similarity
Pocket No.: 10; Query (leader) PDB : 2VUT; Ligand: NAD; Similar sites found with APoc: 24
This union binding pocket(no: 10) in the query (biounit: 2vut.bio16) has 25 residues
No: Leader PDB Ligand Sequence Similarity
1 3W9F I3P 2.27273
2 1VBH PEP 2.55682
3 4AZC NGW 3.40909
4 3QDY CBS 3.4965
5 3QDV NDG 3.4965
6 5C8W PCG 3.4965
7 3QDX CBS 3.4965
8 3QDW NDG 3.4965
9 3QDU CBS CBS 3.4965
10 4KU7 PCG 3.92157
11 2OFD NGA 5.6338
12 3OF1 CMP 5.69106
13 4USI AKG 5.84416
14 5Z5I XYP 6.53409
15 3KMT SAH 6.97674
16 3UYW TAU 7.47664
17 2BR6 HSL 7.93651
18 4OFG PCG 9.02778
19 4G19 GSH 9.09091
20 4CYD CMP 11.5556
21 1W0O SIA 11.6279
22 6ARY FLC 13.9535
23 1M6P M6P 14.4737
24 3QPB URA 16.2791
Pocket No.: 11; Query (leader) PDB : 2VUT; Ligand: NAD; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 11) in the query (biounit: 2vut.bio2) has 23 residues
No: Leader PDB Ligand Sequence Similarity
Pocket No.: 12; Query (leader) PDB : 2VUT; Ligand: NAD; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 12) in the query (biounit: 2vut.bio9) has 23 residues
No: Leader PDB Ligand Sequence Similarity
Pocket No.: 13; Query (leader) PDB : 2VUT; Ligand: NAD; Similar sites found with APoc: 16
This union binding pocket(no: 13) in the query (biounit: 2vut.bio14) has 24 residues
No: Leader PDB Ligand Sequence Similarity
1 5FII PHE None
2 5C79 PBU 5.33333
3 1NME 159 5.47945
4 2OFE NAG 5.6338
5 3N1S 5GP 6.72269
6 2W68 SIA GAL BGC 8.20513
7 5JH2 A2P 8.3871
8 5T52 A2G 9.30233
9 5T52 NGA 9.30233
10 4Z2S NDG 11.9718
11 4Z2S NAG 11.9718
12 5GZZ GSH 15.1376
13 6FX2 FUC C4W NAG BMA MAN NAG GAL 16.2791
14 2J5B TYE 18.6047
15 5JFL NAD 25.5814
16 2IDO TMP 31.3253
Pocket No.: 14; Query (leader) PDB : 2VUT; Ligand: NAD; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 14) in the query (biounit: 2vut.bio4) has 23 residues
No: Leader PDB Ligand Sequence Similarity
Pocket No.: 15; Query (leader) PDB : 2VUT; Ligand: NAD; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 15) in the query (biounit: 2vut.bio6) has 24 residues
No: Leader PDB Ligand Sequence Similarity
Pocket No.: 16; Query (leader) PDB : 2VUT; Ligand: NAD; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 16) in the query (biounit: 2vut.bio8) has 25 residues
No: Leader PDB Ligand Sequence Similarity
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