Receptor
PDB id Resolution Class Description Source Keywords
2VB6 2.3 Å NON-ENZYME: MOBILE MYOSIN VI (MD-INSERT2-CAM, DELTA INSERT1) POST-RIGOR STATE ( CRYSTAL FORM 2) SUS SCROFA MYOSIN VI POST-RIGOR STATE MG.ADP.BEFX CALMODULIN CAM MOLECULAR MOTOR MOTOR PROTEIN
Ref.: THE POST-RIGOR STRUCTURE OF MYOSIN VI AND IMPLICATIONS FOR THE RECOVERY STROKE. EMBO J. V. 27 244 2008
Ligand
Ligand Chain:Residue Validity Ligand Warnings Binding Data NGL Viewer Molecular Weight (Da) Formula SMILES
ADP BEF A:998;
Valid;
none;
submit data n/a n/a n/a n/a
CA B:1148;
B:1149;
B:1150;
B:1151;
Part of Protein;
Part of Protein;
Part of Protein;
Part of Protein;
none;
none;
none;
none;
submit data
40.078 Ca [Ca+2...
MG A:1000;
Part of Protein;
none;
submit data
24.305 Mg [Mg+2...
View in 3D viewer
90% Homology Family
Leader
PDB id Resolution Class Description Source Keywords
2VB6 2.3 Å NON-ENZYME: MOBILE MYOSIN VI (MD-INSERT2-CAM, DELTA INSERT1) POST-RIGOR STATE ( CRYSTAL FORM 2) SUS SCROFA MYOSIN VI POST-RIGOR STATE MG.ADP.BEFX CALMODULIN CAM MOLECULAR MOTOR MOTOR PROTEIN
Ref.: THE POST-RIGOR STRUCTURE OF MYOSIN VI AND IMPLICATIONS FOR THE RECOVERY STROKE. EMBO J. V. 27 244 2008
Members (3)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 65 families.
1 2VAS - ADP BEF n/a n/a
2 2VB6 - ADP BEF n/a n/a
3 4PJJ - ADP C10 H15 N5 O10 P2 c1nc(c2c(n....
70% Homology Family (3)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 56 families.
1 2VAS - ADP BEF n/a n/a
2 2VB6 - ADP BEF n/a n/a
3 4PJJ - ADP C10 H15 N5 O10 P2 c1nc(c2c(n....
50% Homology Family (3)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 39 families.
1 2VAS - ADP BEF n/a n/a
2 2VB6 - ADP BEF n/a n/a
3 4PJJ - ADP C10 H15 N5 O10 P2 c1nc(c2c(n....
Polypharmacology
Similar Ligands
Ligand no: 1; Ligand: ADP BEF; Similar ligands found: 0
No: Ligand ECFP6 Tc MDL keys Tc
Similar Binding Sites (Proteins are less than 50% similar to leader)
Pocket No.: 1; Query (leader) PDB : 2VB6; Ligand: ADP BEF; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 1) in the query (biounit: 2vb6.bio1) has 24 residues
No: Leader PDB Ligand Sequence Similarity
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