Receptor
PDB id Resolution Class Description Source Keywords
2Q46 1.8 Å NON-ENZYME: OTHER ENSEMBLE REFINEMENT OF THE PROTEIN CRYSTAL STRUCTURE OF GENE FROM ARABIDOPSIS THALIANA AT5G02240 ARABIDOPSIS THALIANA ENSEMBLE REFINEMENT REFINEMENT METHODOLOGY DEVELOPMENT AT5NADP STRUCTURAL GENOMICS PROTEIN STRUCTURE INITIATIVE PSFOR EUKARYOTIC STRUCTURAL GENOMICS CESG UNKNOWN FUNCTION
Ref.: ENSEMBLE REFINEMENT OF PROTEIN CRYSTAL STRUCTURES: VALIDATION AND APPLICATION. STRUCTURE V. 15 1040 2007
Ligand
Ligand Chain:Residue Validity Ligand Warnings Binding Data NGL Viewer Molecular Weight (Da) Formula SMILES
NAP A:800;
B:801;
Valid;
Valid;
none;
none;
submit data
743.405 C21 H28 N7 O17 P3 c1cc(...
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90% Homology Family
Leader
PDB id Resolution Class Description Source Keywords
2Q46 1.8 Å NON-ENZYME: OTHER ENSEMBLE REFINEMENT OF THE PROTEIN CRYSTAL STRUCTURE OF GENE FROM ARABIDOPSIS THALIANA AT5G02240 ARABIDOPSIS THALIANA ENSEMBLE REFINEMENT REFINEMENT METHODOLOGY DEVELOPMENT AT5NADP STRUCTURAL GENOMICS PROTEIN STRUCTURE INITIATIVE PSFOR EUKARYOTIC STRUCTURAL GENOMICS CESG UNKNOWN FUNCTION
Ref.: ENSEMBLE REFINEMENT OF PROTEIN CRYSTAL STRUCTURES: VALIDATION AND APPLICATION. STRUCTURE V. 15 1040 2007
Members (4)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 1256 families.
1 2Q46 - NAP C21 H28 N7 O17 P3 c1cc(c[n+]....
2 1XQ6 - NAP C21 H28 N7 O17 P3 c1cc(c[n+]....
3 1YBM - NAP C21 H28 N7 O17 P3 c1cc(c[n+]....
4 2Q4B - NAP C21 H28 N7 O17 P3 c1cc(c[n+]....
70% Homology Family (4)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 1068 families.
1 2Q46 - NAP C21 H28 N7 O17 P3 c1cc(c[n+]....
2 1XQ6 - NAP C21 H28 N7 O17 P3 c1cc(c[n+]....
3 1YBM - NAP C21 H28 N7 O17 P3 c1cc(c[n+]....
4 2Q4B - NAP C21 H28 N7 O17 P3 c1cc(c[n+]....
50% Homology Family (4)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 922 families.
1 2Q46 - NAP C21 H28 N7 O17 P3 c1cc(c[n+]....
2 1XQ6 - NAP C21 H28 N7 O17 P3 c1cc(c[n+]....
3 1YBM - NAP C21 H28 N7 O17 P3 c1cc(c[n+]....
4 2Q4B - NAP C21 H28 N7 O17 P3 c1cc(c[n+]....
Polypharmacology
Similar Ligands
Ligand no: 1; Ligand: NAP; Similar ligands found: 127
No: Ligand ECFP6 Tc MDL keys Tc
1 NAP 1 1
2 NA0 0.881356 0.986301
3 TAP 0.872881 0.934211
4 NDO 0.840336 0.972603
5 NAD 0.811966 0.986111
6 N01 0.733871 0.958904
7 A3D 0.712 0.972603
8 NBP 0.707692 0.935065
9 NAD IBO 0.688 0.921053
10 NHD 0.68254 0.958904
11 NJP 0.661417 0.972973
12 NAJ PYZ 0.659091 0.898734
13 NFD 0.658915 0.934211
14 DND 0.619048 0.959459
15 NXX 0.619048 0.959459
16 ZID 0.605839 0.972603
17 NAQ 0.59854 0.922078
18 ATR 0.59292 0.917808
19 NAE 0.591241 0.946667
20 NDE 0.58042 0.986301
21 A22 0.571429 0.958904
22 AMP NAD 0.571429 0.933333
23 NAJ 0.567164 0.986111
24 A2R 0.563025 0.932432
25 NDC 0.561644 0.922078
26 NA7 0.552846 0.907895
27 ODP 0.551471 0.935065
28 A2P 0.539823 0.930556
29 8ID 0.537313 0.910256
30 NAD BBN 0.525974 0.865854
31 NPW 0.525547 0.8875
32 CNA 0.521739 0.959459
33 NZQ 0.521739 0.910256
34 NAD CJ3 0.519231 0.835294
35 NDP 0.514493 0.922078
36 PO4 PO4 A A A A PO4 0.503937 0.930556
37 DG1 0.503401 0.922078
38 1DG 0.503401 0.922078
39 NAD TDB 0.5 0.696078
40 TXP 0.5 0.922078
41 NMN AMP PO4 0.492958 0.921053
42 XNP 0.492958 0.875
43 25L 0.492308 0.958904
44 25A 0.492063 0.972222
45 NAD NDT 0.490909 0.747368
46 NMN 0.486726 0.888889
47 NGD 0.485714 0.935065
48 2AM 0.477876 0.891892
49 ADP 0.458333 0.945205
50 PAP 0.451613 0.931507
51 ADP MG 0.45082 0.906667
52 BEF ADP 0.447154 0.883117
53 ADP BEF 0.447154 0.883117
54 A2D 0.445378 0.945205
55 AN2 0.442623 0.932432
56 ADP PO3 0.44 0.944444
57 SAP 0.44 0.896104
58 AGS 0.44 0.896104
59 M33 0.439024 0.906667
60 AR6 AR6 0.438849 0.945205
61 BA3 0.438017 0.945205
62 ATP MG 0.436508 0.906667
63 ADP BMA 0.43609 0.92
64 OAD 0.43609 0.92
65 ATP 0.435484 0.945205
66 OOB 0.435115 0.958904
67 B4P 0.434426 0.945205
68 AP5 0.434426 0.945205
69 GAP 0.433071 0.92
70 0WD 0.432432 0.922078
71 5FA 0.432 0.945205
72 2A5 0.432 0.87013
73 AQP 0.432 0.945205
74 00A 0.428571 0.909091
75 CA0 0.427419 0.92
76 ALF ADP 0.426357 0.871795
77 ADP ALF 0.426357 0.871795
78 ACP 0.424 0.92
79 NAJ PZO 0.423841 0.897436
80 9SN 0.423358 0.897436
81 VO4 ADP 0.423077 0.932432
82 ANP MG 0.423077 0.896104
83 ADP VO4 0.423077 0.932432
84 WAQ 0.422222 0.884615
85 ACQ 0.421875 0.92
86 V3L 0.421875 0.945205
87 ADQ 0.421053 0.92
88 AR6 0.420635 0.918919
89 APR 0.420635 0.918919
90 ATP A A A 0.42029 0.958333
91 CO7 0.419753 0.786517
92 1ZZ 0.419118 0.841463
93 3OD 0.419118 0.92
94 DLL 0.41791 0.958904
95 AD9 0.417323 0.92
96 NAX 0.416667 0.875
97 OVE 0.416667 0.857143
98 MYR AMP 0.416058 0.841463
99 AV2 0.415385 0.868421
100 A3P 0.414634 0.944444
101 NNR 0.414414 0.72973
102 ALF ADP 3PG 0.413793 0.8625
103 OMR 0.413793 0.831325
104 LA8 ALF 3PG 0.413793 0.8625
105 ANP 0.410853 0.92
106 A1R 0.410448 0.860759
107 ABM 0.409836 0.893333
108 AMP 0.408333 0.944444
109 A 0.408333 0.944444
110 SON 0.408 0.933333
111 PPS 0.407692 0.829268
112 5AL 0.407692 0.932432
113 TYR AMP 0.407143 0.933333
114 NAI 0.406897 0.909091
115 7D3 0.406504 0.857143
116 DAL AMP 0.406015 0.932432
117 ADX 0.404762 0.829268
118 ATF 0.40458 0.907895
119 3UK 0.404412 0.945946
120 AMP DBH 0.404255 0.894737
121 139 0.402685 0.875
122 AMP MG 0.401639 0.893333
123 50T 0.401575 0.906667
124 SRP 0.401515 0.907895
125 A A 0.40146 0.972222
126 FA5 0.4 0.933333
127 3AM 0.4 0.90411
Similar Binding Sites (Proteins are less than 50% similar to leader)
Pocket No.: 1; Query (leader) PDB : 2Q46; Ligand: NAP; Similar sites found: 588
This union binding pocket(no: 1) in the query (biounit: 2q46.bio2) has 30 residues
No: Leader PDB Ligand P-value (APoc) PS_Score (APoc) Sequence Similarity
1 4XUC SAM 0.003543 0.40699 None
2 4XUC 43G 0.003543 0.40699 None
3 3TN7 NJP 0.0000002789 0.56102 1.16732
4 2AG5 NAD 0.000000524 0.54847 1.21951
5 5L53 NAP 0.0000001303 0.53432 1.58103
6 4Q9N NAI 0.00001177 0.49854 1.58103
7 1J5P NAD 0.002531 0.4088 1.58103
8 5XVQ SAH 0.006746 0.40281 1.58103
9 1RKX NAD 0.00000009367 0.55892 1.97628
10 4OHU 2TK 0.00002724 0.51377 1.97628
11 4OHU NAD 0.00002724 0.51377 1.97628
12 1WMA AB3 0.00002003 0.5071 1.97628
13 1WMA NDP 0.00002003 0.5071 1.97628
14 3VZS NAP 0.0000006645 0.46108 1.97628
15 1E1M FAD 0.002774 0.42873 1.97628
16 9LDT NAD 0.001315 0.4198 1.97628
17 4TXI FAD 0.001843 0.4155 1.97628
18 9LDB NAD 0.001173 0.41053 1.97628
19 1J49 NAD 0.002178 0.40859 1.97628
20 3LAD FAD 0.006011 0.40635 1.97628
21 2VDV SAM 0.001291 0.46061 2.03252
22 1JAY NAP 0.003434 0.41816 2.35849
23 1ZEM NAD 0.000000004187 0.61393 2.37154
24 1FK8 NAD 0.0000001126 0.58902 2.37154
25 1VL8 NAP 0.0000001114 0.54405 2.37154
26 1UWK NAD 0.0002831 0.46291 2.37154
27 2D2I NAP 0.0002125 0.43337 2.37154
28 1O0S NAI 0.001271 0.43301 2.37154
29 5U5G NAP 0.0005248 0.43214 2.37154
30 1WP4 NDP 0.000652 0.43162 2.37154
31 5H81 NAP 0.001662 0.43153 2.37154
32 1X7D ORN 0.001036 0.4315 2.37154
33 1X7D NAD 0.000689 0.42764 2.37154
34 4ZGS NAD 0.0003273 0.42661 2.37154
35 2NAD NAD 0.001286 0.4254 2.37154
36 1RM4 NDP 0.0006894 0.42467 2.37154
37 1U1I NAD 0.0002198 0.4233 2.37154
38 2Y6Q I7T 0.003019 0.42214 2.37154
39 2Y6Q FAD 0.001241 0.42214 2.37154
40 2CVZ NDP 0.002112 0.41468 2.37154
41 3DMH SAM 0.004974 0.41446 2.37154
42 1SOW NAD 0.001969 0.41439 2.37154
43 1Q9I TEO 0.007774 0.41238 2.37154
44 3CTY FAD 0.004749 0.41234 2.37154
45 3DXY SAM 0.01554 0.41231 2.37154
46 3QVP FAD 0.005527 0.40876 2.37154
47 2P41 SAH 0.009512 0.40844 2.37154
48 3TLJ SAH 0.00542 0.40677 2.37154
49 4YCA NDP 0.003865 0.40432 2.37154
50 1YY5 FAD 0.009238 0.40062 2.37154
51 1ZK4 NAP 0.00000747 0.51444 2.39044
52 4RSL FAD 0.005758 0.401 2.47191
53 1R37 NAD 0.003217 0.40862 2.59366
54 1JA9 NDP 0.0000001273 0.57619 2.7668
55 3SJU NDP 0.0000000404 0.57209 2.7668
56 3WMX NAD 0.0000027 0.5287 2.7668
57 1QG6 NAD 0.00001447 0.51279 2.7668
58 1QG6 TCL 0.00001447 0.51279 2.7668
59 1SNY NAP 0.000002399 0.5116 2.7668
60 4O1M NAD 0.000008434 0.5023 2.7668
61 4XQC 13D 0.00009556 0.48092 2.7668
62 4XQC NAD 0.0001181 0.47607 2.7668
63 2F1K NAP 0.000144 0.46065 2.7668
64 5UAV NDP 0.0003975 0.44665 2.7668
65 5UAV TFB 0.0003975 0.44665 2.7668
66 2GCG NDP 0.0003053 0.4411 2.7668
67 4KOA NDP 0.002359 0.43963 2.7668
68 2DFV NAD 0.000435 0.43182 2.7668
69 1SC6 NAD 0.001544 0.41847 2.7668
70 5J60 FAD 0.003119 0.41581 2.7668
71 5JWC FAD 0.002928 0.41141 2.7668
72 1GQ2 NAP 0.001867 0.41114 2.7668
73 2GLX NDP 0.004579 0.40692 2.7668
74 1LLU NAD 0.0007285 0.40476 2.7668
75 1HYH NAD 0.001672 0.4046 2.7668
76 3NTD FAD 0.005335 0.40446 2.7668
77 2OBF F83 0.007036 0.40266 2.7668
78 2OBF SAH 0.007036 0.40266 2.7668
79 1DL2 NAG NAG BMA 0.02618 0.40216 2.7668
80 3MJE NDP 0.0000003506 0.55514 2.82258
81 1NNU NAD 0.00009634 0.50673 3.05677
82 1NNU TCT 0.00009984 0.50673 3.05677
83 1TE2 PGA 0.0392 0.40347 3.09735
84 2AE2 NAP 0.00000008846 0.59712 3.16206
85 2AE2 PTO 0.00000008846 0.59712 3.16206
86 2GDZ NAD 0.0000001641 0.56775 3.16206
87 1BXK NAD 0.0000001704 0.56495 3.16206
88 1NFQ NAI 0.0000005335 0.55216 3.16206
89 4O0L NDP 0.0000001927 0.54787 3.16206
90 1ZBQ NAD 0.00002115 0.46828 3.16206
91 3A4T SFG 0.0007068 0.44728 3.16206
92 1UXG NAD 0.0006197 0.4415 3.16206
93 2EG5 SAH 0.004031 0.43687 3.16206
94 1HYE NAP 0.0001756 0.42975 3.16206
95 1CF2 NAP 0.0004217 0.42908 3.16206
96 1BW9 NAD 0.001912 0.42896 3.16206
97 2WPF FAD 0.009944 0.42518 3.16206
98 5A04 BGC 0.004945 0.42341 3.16206
99 5A04 NDP 0.004061 0.42341 3.16206
100 1PN0 FAD 0.003025 0.42299 3.16206
101 1PN0 IPH 0.003176 0.42299 3.16206
102 1EBF NAD 0.0004411 0.42295 3.16206
103 2WPF WPF 0.01246 0.42213 3.16206
104 3OND ADN 0.003229 0.42183 3.16206
105 1FEC FAD 0.003664 0.41871 3.16206
106 1C1X NAD 0.001681 0.41859 3.16206
107 1NVM NAD 0.0007037 0.4183 3.16206
108 4C3Y FAD 0.00305 0.41721 3.16206
109 5MQ6 NDP 0.003281 0.41586 3.16206
110 4C3Y ANB 0.004318 0.41581 3.16206
111 2C7G FAD 0.006759 0.41419 3.16206
112 2C7G ODP 0.006488 0.41419 3.16206
113 1TDF NAP 0.01261 0.41108 3.16206
114 4RPL FAD 0.0105 0.41088 3.16206
115 1BXG NAD 0.001305 0.40992 3.16206
116 4RPL 3UC 0.01469 0.4065 3.16206
117 1SAY PYR 0.003811 0.40575 3.16206
118 1TDF FAD 0.007654 0.40567 3.16206
119 1F8G NAD 0.00788 0.40283 3.16206
120 4R5M NAP 0.003349 0.40147 3.16206
121 4NBT NAD 0.0000001788 0.56415 3.33333
122 1ORR NAD 0.00000001135 0.61892 3.55731
123 2Q2V NAD 0.0000001695 0.57338 3.55731
124 1IY8 NAD 0.0000003739 0.55613 3.55731
125 2BGM NAJ 0.000000331 0.54506 3.55731
126 4D42 NAP 0.000004441 0.54093 3.55731
127 4D42 W0I 0.000004441 0.54093 3.55731
128 3A28 NAD 0.0000007747 0.53276 3.55731
129 1GEG NAD 0.0000009304 0.52986 3.55731
130 5CG1 NAD BBN 0.00002351 0.52115 3.55731
131 2BH9 NAP 0.0002123 0.4928 3.55731
132 1GZ6 NAI 0.00001262 0.48199 3.55731
133 1E5Q NDP 0.00003712 0.47594 3.55731
134 3L4S 3PG 0.0001754 0.45643 3.55731
135 3L4S NAD 0.0001607 0.45643 3.55731
136 5T9F TYR 0.0003076 0.4523 3.55731
137 5T9F NAP 0.0004272 0.44542 3.55731
138 1YB5 NAP 0.0004354 0.44248 3.55731
139 5T9E NAP 0.0002405 0.43834 3.55731
140 3A06 FOM 0.0007586 0.43562 3.55731
141 3A06 NDP 0.0007115 0.43417 3.55731
142 5UAO FAD 0.001329 0.42838 3.55731
143 1LDN NAD 0.000842 0.42725 3.55731
144 5M67 NAD 0.002665 0.42612 3.55731
145 5HSA FAS 0.001845 0.42596 3.55731
146 5JY6 NAD 0.002823 0.42595 3.55731
147 5M67 ADE 0.002768 0.42544 3.55731
148 5M67 3D1 0.002921 0.42448 3.55731
149 1PL6 572 0.001101 0.42414 3.55731
150 1PL6 NAD 0.0001764 0.42139 3.55731
151 1MUU NAD 0.001735 0.42104 3.55731
152 3KB6 NAD 0.0008601 0.42059 3.55731
153 4NEC SAH 0.008029 0.41872 3.55731
154 1LTH NAD 0.0006642 0.41529 3.55731
155 3EF0 ALF 0.02728 0.41323 3.55731
156 1MV8 NAD 0.001234 0.41188 3.55731
157 2JJQ SAH 0.01468 0.40984 3.55731
158 1F8F NAD 0.003335 0.40965 3.55731
159 4DSG FAD 0.01143 0.4074 3.55731
160 4DSG UDP 0.01143 0.4074 3.55731
161 5JJR SAH 0.01054 0.40642 3.55731
162 5O4F 8VE 0.02902 0.40619 3.55731
163 3GD4 NAD 0.02234 0.40197 3.55731
164 1P7T PYR 0.03202 0.40189 3.55731
165 3GD4 FAD 0.01513 0.40094 3.55731
166 1PJS NAD 0.0003506 0.4005 3.55731
167 1P0F NAP 0.004612 0.40009 3.55731
168 3ORF NAD 0.0000006824 0.54201 3.58566
169 1EJ0 SAM 0.00009255 0.4218 3.88889
170 2YY7 NAD 0.0000008389 0.54264 3.95257
171 3V1U NAD 0.0000002714 0.54262 3.95257
172 1X1T NAD 0.000000218 0.53255 3.95257
173 1P77 ATR 0.0006752 0.49681 3.95257
174 3CMC NAD 0.001255 0.45136 3.95257
175 4E5N NAD 0.0003393 0.44243 3.95257
176 3ABI NAD 0.0002555 0.44037 3.95257
177 3SSO SAH 0.001905 0.4325 3.95257
178 1X87 NAD 0.0001932 0.43208 3.95257
179 4J36 1HR 0.00191 0.42737 3.95257
180 4J36 FAD 0.001075 0.42589 3.95257
181 1EZ4 NAD 0.0006745 0.42132 3.95257
182 1T26 NAI 0.002574 0.42117 3.95257
183 1GR0 NAD 0.001566 0.42081 3.95257
184 1SQF SAM 0.005139 0.42051 3.95257
185 5BVA FAD 0.003905 0.41578 3.95257
186 4YNU FAD 0.005076 0.41117 3.95257
187 4YNU LGC 0.006375 0.41059 3.95257
188 2A92 NAI 0.002895 0.40792 3.95257
189 3WLE NAD 0.003979 0.40732 3.95257
190 5AYV NAP 0.0009683 0.4073 3.95257
191 5AYV KPL 0.004305 0.40485 3.95257
192 2IBN I1N 0.036 0.40128 4
193 1E3W NAD 0.00000009923 0.566 4.34783
194 1E6W NAD 0.0000002002 0.55482 4.34783
195 4NBW NAD 0.000000503 0.54236 4.34783
196 5MSO NAP 0.0000005326 0.53655 4.34783
197 1H9A NAP 0.00005503 0.47748 4.34783
198 2HJR APR 0.0008218 0.44089 4.34783
199 3LST SAH 0.003499 0.43982 4.34783
200 1GPE FAD 0.003328 0.41951 4.34783
201 4CNK FAD 0.002357 0.41852 4.34783
202 2DKH FAD 0.001743 0.41773 4.34783
203 4Z24 FAD 0.003981 0.41355 4.34783
204 2XZ9 PYR 0.03184 0.4089 4.34783
205 1ZMD NAI 0.00486 0.40307 4.34783
206 2DKH 3HB 0.006943 0.40093 4.34783
207 3S5W FAD 0.004115 0.40074 4.34783
208 4NBU NAI 0.00000008674 0.56026 4.4
209 3GEG NAD 0.0000001436 0.56314 4.45344
210 4BQS ADP 0.04412 0.40044 4.54545
211 3KO8 NAD 0.00000003339 0.56651 4.74308
212 1KEW NAD 0.000001173 0.56586 4.74308
213 4ZRN NAD 0.00000004979 0.54602 4.74308
214 1KEW TYD 0.00000484 0.5394 4.74308
215 3U4C NDP 0.000002496 0.52057 4.74308
216 5L4S NAP 0.000007853 0.51511 4.74308
217 5L4S 6KX 0.000007853 0.51511 4.74308
218 4YAG NAI 0.00002107 0.50496 4.74308
219 1CER NAD 0.0001622 0.45861 4.74308
220 4ZRN UPG 0.0000001528 0.45739 4.74308
221 3BAZ NAP 0.0002933 0.45202 4.74308
222 2DBZ NAP 0.0001962 0.44841 4.74308
223 1P31 EPU 0.00219 0.43719 4.74308
224 1QO8 FAD 0.001338 0.43259 4.74308
225 5MDH NAD 0.0004577 0.43073 4.74308
226 4MDH NAD 0.001015 0.42418 4.74308
227 4K28 NAD 0.001725 0.42114 4.74308
228 1H6C NDP 0.002077 0.41958 4.74308
229 2HQM FAD 0.002967 0.41869 4.74308
230 1Y8Q ATP 0.003507 0.41165 4.74308
231 1H6C SIN 0.00396 0.41064 4.74308
232 4A6D SAM 0.007789 0.40912 4.74308
233 2RGJ FAD 0.00313 0.40786 4.74308
234 2V3A FAD 0.005456 0.40407 4.74308
235 5GT9 NAP 0.00000005846 0.58711 5.13834
236 2PZM UDP 0.000004357 0.53378 5.13834
237 2PZM NAD 0.000004357 0.53378 5.13834
238 1N5D NDP 0.00000566 0.49439 5.13834
239 1OAA OAA 0.0000004817 0.46631 5.13834
240 4RDH AMP 0.001465 0.45344 5.13834
241 1V6A TRE 0.005509 0.44949 5.13834
242 4W6Z 8ID 0.0005289 0.44178 5.13834
243 3QV1 NAD 0.0001655 0.44067 5.13834
244 1K3T BRZ 0.0006443 0.43451 5.13834
245 2CVQ NDP 0.000668 0.42815 5.13834
246 3UCL NAP 0.005181 0.42645 5.13834
247 3UCL FAD 0.005449 0.42362 5.13834
248 3UCL CYH 0.005449 0.42362 5.13834
249 3C1O NAP 0.0007409 0.41411 5.13834
250 3GMB FAD 0.00272 0.41146 5.13834
251 2YYY NAP 0.002209 0.40836 5.13834
252 1PS9 FAD 0.005158 0.40807 5.13834
253 1ZH8 NAP 0.001936 0.40759 5.13834
254 2FZW NAD 0.006789 0.40515 5.13834
255 3WBF NAP 0.002727 0.40488 5.13834
256 2PT9 2MH 0.005317 0.4001 5.13834
257 3SJ7 NDP 0.00000007008 0.57964 5.15873
258 1HDR NAD 0.000003188 0.42344 5.32787
259 3JUT GTQ 0.01617 0.43183 5.38462
260 1E6E FAD 0.001614 0.42274 5.46875
261 1JG3 ADN 0.004182 0.42454 5.53191
262 1MXH DHF 0.00000005777 0.60103 5.5336
263 1MXH NAP 0.0000001108 0.58983 5.5336
264 3H4V DVP 0.0000002875 0.57982 5.5336
265 3H4V NAP 0.0000008577 0.5593 5.5336
266 1XHL NDP 0.0000004523 0.55493 5.5336
267 3O26 NDP 0.0000006741 0.54428 5.5336
268 1WVG APR 0.0000005981 0.52965 5.5336
269 2IZ1 ATR 0.003376 0.45566 5.5336
270 5KKA 6V0 0.0005186 0.43678 5.5336
271 5JE8 NAD 0.0007861 0.43484 5.5336
272 3SQP FAD 0.02086 0.42781 5.5336
273 4GKV NAD 0.001779 0.41865 5.5336
274 3FUU ADN 0.007086 0.41093 5.5336
275 1UI0 URA 0.01911 0.41436 5.85366
276 1AE1 NAP 0.00000008719 0.58458 5.92885
277 2V6G NAP 0.000000151 0.57126 5.92885
278 3AY6 NAI 0.000000341 0.49968 5.92885
279 1EQ2 NAP 0.00004345 0.46786 5.92885
280 3AY6 BGC 0.000001205 0.43384 5.92885
281 4E13 NAD 0.0002445 0.4193 5.92885
282 1BZL FAD 0.01646 0.41588 5.92885
283 1B74 DGN 0.03234 0.41467 5.92885
284 2Q0L NAP 0.0103 0.41362 5.92885
285 5JCA FAD 0.00453 0.4113 5.92885
286 2O4C NAD 0.00226 0.41076 5.92885
287 5JCA NDP 0.0101 0.41032 5.92885
288 1YKF NAP 0.001893 0.40648 5.92885
289 2FN8 RIP 0.03647 0.40597 5.92885
290 1XCL SAH 0.0008354 0.41202 5.95745
291 2DT5 NAD 0.001221 0.41818 6.16114
292 1U7T TDT 0.0000002582 0.58015 6.32411
293 1GEE NAD 0.00000007824 0.56965 6.32411
294 1Z6Z NAP 0.0000002449 0.56111 6.32411
295 1YXM ADE 0.00003895 0.56098 6.32411
296 4J7U YTZ 0.000001005 0.55802 6.32411
297 4J7U NAP 0.000001005 0.55802 6.32411
298 1VL0 NAI 0.0000002187 0.54729 6.32411
299 2B4Q NAP 0.0000003964 0.54437 6.32411
300 1U7T NAD 0.0000005375 0.54121 6.32411
301 1BDB NAD 0.000001172 0.50814 6.32411
302 2PD4 DCN 0.00001378 0.50247 6.32411
303 2PD4 NAD 0.00001688 0.49902 6.32411
304 4KWI NAP 0.0000001419 0.49869 6.32411
305 4KWI 1TJ 0.0000001558 0.49252 6.32411
306 3B1F NAD 0.00008571 0.48612 6.32411
307 2X6T NAP 0.00002802 0.47494 6.32411
308 1GAD NAD 0.0002291 0.43941 6.32411
309 3GDN FAD 0.00332 0.41673 6.32411
310 3GDN HBX 0.004953 0.41673 6.32411
311 2VYN NAD 0.001392 0.41601 6.32411
312 1H82 GZZ 0.007593 0.41556 6.32411
313 1H82 FAD 0.006269 0.41556 6.32411
314 2I3G NAP 0.00102 0.41243 6.32411
315 4M73 SAH 0.003426 0.40988 6.32411
316 1YJQ NAP 0.00288 0.40927 6.32411
317 2NU8 COA 0.0008102 0.43108 6.4433
318 4XZ3 COA 0.0008526 0.40756 6.52174
319 4OSP NAP 0.000000118 0.57102 6.71937
320 1A27 NAP 0.0000005189 0.54863 6.71937
321 5JAQ NAI 0.00001986 0.50203 6.71937
322 2PK3 A2R 0.000001697 0.48292 6.71937
323 3HB5 NAP 0.00000004778 0.47079 6.71937
324 3H9E NAD 0.0001508 0.45985 6.71937
325 2B4R AES 0.0003624 0.43982 6.71937
326 3NJ4 AFX 0.007165 0.43864 6.71937
327 3NJ4 NAD 0.007224 0.43848 6.71937
328 2B4R NAD 0.0004768 0.43675 6.71937
329 3UOY NAP 0.003313 0.4341 6.71937
330 3UOY FAD 0.003313 0.4341 6.71937
331 4D04 NAP 0.004774 0.42474 6.71937
332 4D04 FAD 0.004774 0.42474 6.71937
333 2E5V FAD 0.002237 0.4246 6.71937
334 1YKJ PHB 0.005143 0.42337 6.71937
335 1YKJ FAD 0.005143 0.42337 6.71937
336 4PLG NAI 0.001717 0.42284 6.71937
337 4CJN QNZ 0.04396 0.40255 6.71937
338 1Z45 NAD 0.0000007193 0.53371 7.11462
339 3CIF G3H 0.0004717 0.44244 7.11462
340 3CIF NAD 0.0003061 0.44105 7.11462
341 1QZZ SAM 0.00733 0.42438 7.11462
342 1XDS SAM 0.00968 0.41857 7.11462
343 5MW4 5JU 0.003141 0.41569 7.11462
344 1KC7 PPR 0.01774 0.41489 7.11462
345 2HK9 NAP 0.001636 0.40868 7.11462
346 1N1G BCP 0.003908 0.40649 7.11462
347 2AG8 NAP 0.0007314 0.40403 7.11462
348 1DXY NAD 0.002281 0.40211 7.11462
349 1I8T FAD 0.006726 0.40148 7.11462
350 1HKU NAD 0.002247 0.40061 7.11462
351 2Z8L NAG FUC SIA GAL 0.01285 0.42927 7.21154
352 1V35 NAI 0.00001674 0.43116 7.29483
353 1JNR FAD 0.005439 0.42852 7.33333
354 1C3V NDP 0.0008961 0.41423 7.34694
355 3EGV SAH 0.009853 0.41106 7.48299
356 3QWI CUE 0.0000001877 0.58569 7.50988
357 3QWI NAP 0.00000007316 0.58548 7.50988
358 1XKQ NDP 0.0000004352 0.55749 7.50988
359 4FC7 NAP 0.000001073 0.55687 7.50988
360 4FC7 COA 0.000001073 0.55687 7.50988
361 1Y1P NMN AMP PO4 0.00006949 0.44753 7.50988
362 3B1J NAD 0.0002061 0.44271 7.50988
363 4AT0 FAD 0.003495 0.42043 7.50988
364 3B20 NAD 0.0008317 0.41256 7.50988
365 5EOW FAD 0.00257 0.41242 7.65432
366 3HVJ 705 0.005782 0.40202 7.69231
367 2F5Z FAD 0.003702 0.41578 7.8125
368 1EJ4 M7G 0.04429 0.40866 7.89474
369 3GGO ENO 0.002745 0.41905 7.90514
370 3GGO NAI 0.002745 0.41905 7.90514
371 4BJZ P3A 0.01262 0.41107 7.90514
372 1V8B NAD 0.00337 0.41016 7.90514
373 4L8V NAP 0.002413 0.4083 7.90514
374 2G5C NAD 0.003115 0.40405 7.90514
375 1GY8 NAD 0.00000006844 0.58448 8.3004
376 1XG5 NAP 0.00000004459 0.57055 8.3004
377 4ZA2 NAD 0.0000004056 0.55061 8.3004
378 1EK6 NAI 0.00001149 0.52727 8.3004
379 1EK6 UPG 0.00001908 0.5202 8.3004
380 4A0S NAP 0.002027 0.41258 8.3004
381 4YSX FAD 0.005033 0.40751 8.3004
382 5TUK FAD 0.003351 0.40284 8.3004
383 2HMT NAI 0.0002101 0.42705 8.33333
384 2DC1 NAD 0.002823 0.40149 8.47458
385 4K26 NDP 0.0000000045 0.60423 8.69565
386 4K26 SFF 0.00000002384 0.52343 8.69565
387 2FR1 NDP 0.0000006554 0.5229 8.69565
388 5CAE SIN 0.0006194 0.43518 8.69565
389 5MZI FYK 0.003524 0.42891 8.69565
390 5MZI FAD 0.003389 0.42891 8.69565
391 1U8X NAD 0.001364 0.42216 8.69565
392 5CAE COA 0.000462 0.41972 8.69565
393 2EV9 NAP 0.003672 0.40392 8.69565
394 2EV9 SKM 0.003672 0.40392 8.69565
395 3EGI ADP 0.01094 0.43281 8.73786
396 2VHW NAI 0.001624 0.42263 8.75332
397 2EWM NAD 0.0000005769 0.53088 8.83534
398 1O5I NAD 0.00004332 0.44253 8.83534
399 1XHC FAD 0.004769 0.40423 8.99183
400 3LU1 NAD 0.0000003147 0.54705 9.06593
401 2Q1S NAI 0.0000009639 0.56017 9.09091
402 4PIV NDP 0.0000004232 0.55406 9.09091
403 2WYV NAD 0.000004915 0.51127 9.09091
404 3V1Y NAD 0.0002751 0.44957 9.09091
405 5LD5 NAD 0.0001411 0.43646 9.09091
406 4RQU NAD 0.002822 0.40431 9.09091
407 4FN4 NAD 0.000000281 0.54926 9.48617
408 4EUE NAI 0.00001135 0.50089 9.48617
409 3RJ5 NAD 0.0000002609 0.49975 9.48617
410 1HDG NAD 0.0002107 0.45778 9.48617
411 4J4H NAI 0.002505 0.42544 9.48617
412 4J4H 1J1 0.002505 0.42544 9.48617
413 4JK3 NAD 0.0006325 0.42312 9.48617
414 2C5A GDC 0.000002801 0.41576 9.48617
415 2C5A NAD 0.000002801 0.41576 9.48617
416 1MO9 FAD 0.01357 0.41347 9.48617
417 1OMO NAD 0.001071 0.40856 9.48617
418 5THQ NDP 0.000000006152 0.62232 9.88142
419 5F5N NAD 0.0000008866 0.52802 9.88142
420 3OJF IMJ 0.000008477 0.5195 9.88142
421 3OJF NDP 0.000006634 0.51489 9.88142
422 1ZQ9 SAM 0.001126 0.45019 9.88142
423 4DPL NAP 0.000491 0.42845 9.88142
424 3GFB NAD 0.001071 0.42328 9.88142
425 4YRY FAD 0.002855 0.41936 9.88142
426 1B8U OAA 0.001821 0.41571 9.88142
427 1REO FAD 0.003931 0.41077 9.88142
428 4YRY NAD 0.0084 0.40879 9.88142
429 1B8U NAD 0.0006046 0.40329 9.88142
430 1GV0 NAD 0.003268 0.40326 9.88142
431 1LSS NAD 0.0001199 0.42927 10
432 4ITU NAI 0.0000002467 0.53097 10.0372
433 4ITU 1HS 0.0000005981 0.47114 10.0372
434 1W73 NAP 0.000000112 0.59527 10.2767
435 1W8D NAP 0.0000001699 0.58788 10.2767
436 1W6U NAP 0.0000001855 0.54192 10.2767
437 5EPO NAP 0.00006889 0.46741 10.2767
438 1J0X NAD 0.001777 0.42864 10.2767
439 2GSD NAD 0.001177 0.42691 10.2767
440 1KNR FAD 0.005248 0.40678 10.2767
441 1KYQ NAD 0.0003632 0.40037 10.2767
442 2DTX BMA 0.00000005588 0.60336 10.6719
443 1N7G NDP 0.000001232 0.58182 10.6719
444 1N7G GDR 0.000001126 0.57128 10.6719
445 4KP7 1UQ 0.0002844 0.4607 10.6719
446 4KP7 NAP 0.0003621 0.4606 10.6719
447 3WQQ IB3 0.0003695 0.45391 10.6719
448 1DSS NAD 0.0002558 0.43371 10.6719
449 2YVF NAD 0.01163 0.40773 10.6719
450 2YVF FAD 0.01123 0.40773 10.6719
451 2YVJ NAI 0.01406 0.40077 10.6719
452 1UAY ADN 0.00003148 0.53795 10.7438
453 1XSE NDP 0.00000001068 0.63373 11.0672
454 2DKN NAI 0.00000004814 0.58584 11.0672
455 3OIG NAD 0.00001492 0.48732 11.0672
456 2PV7 NAD 0.0001748 0.45377 11.0672
457 4BVA T3 0.005728 0.40323 11.0672
458 4BVA NDP 0.004044 0.40103 11.0672
459 4QTU SAM 0.003217 0.42608 11.1111
460 4CQM NAP 0.0000001325 0.57131 11.4625
461 1D7O NAD 0.000005908 0.46107 11.4625
462 1UDB NAD 0.00000101 0.43193 11.4625
463 2RAB NAD 0.005103 0.42548 11.4625
464 2RAB FAD 0.002249 0.42548 11.4625
465 4X9M FAD 0.007715 0.40009 11.4625
466 3O03 NAP 0.0000006124 0.53461 11.8577
467 4XB2 HSE 0.000211 0.45186 11.8577
468 4XB2 NDP 0.00006194 0.44935 11.8577
469 5E8J SAH 0.002537 0.44653 11.8577
470 1A5Z NAD 0.0009725 0.44141 11.8577
471 3T31 DCQ 0.003526 0.42672 11.8577
472 3T31 FAD 0.003458 0.42555 11.8577
473 1GET NAP 0.007497 0.41959 11.8577
474 1GET FAD 0.01107 0.41115 11.8577
475 1SKQ GDP 0.02114 0.40569 11.8577
476 1NYT NAP 0.005698 0.4003 11.8577
477 1Q7B NAP 0.00000001002 0.60292 11.8852
478 3G89 SAM 0.001044 0.46503 12.0482
479 3RNM FAD 0.002638 0.42172 12.069
480 2C29 NAP 0.000002472 0.5437 12.253
481 2C29 DQH 0.000002769 0.54171 12.253
482 2IXB NAD 0.0006443 0.41959 12.253
483 3AFN NAP 0.00000006259 0.59016 12.4031
484 2GZ3 NAP 0.001352 0.43818 12.6482
485 5U8U FAD 0.01722 0.40235 12.6482
486 2CFC NAD 0.0000001555 0.56646 12.8
487 2JAP NDP 0.0000004503 0.53473 12.9555
488 1UZN NAP 0.000009876 0.43806 12.9555
489 5ITV NAI 0.00000005919 0.5869 13.0435
490 1SB8 UD2 0.0000006034 0.57897 13.0435
491 1SB8 NAD 0.0000008704 0.5674 13.0435
492 4J1Q NDP 0.0000007271 0.53637 13.0435
493 1VKO NAD 0.0003018 0.42747 13.0435
494 2JAH NDP 0.0000003027 0.55966 13.3603
495 1R6D DAU 0.000001223 0.56632 13.4387
496 1R6D NAD 0.000001306 0.56632 13.4387
497 5BSH PRO 0.004109 0.40203 13.4387
498 2BD0 NAP 0.00000007928 0.55476 13.5246
499 1VM6 NAD 0.0006026 0.41996 13.5965
500 1G0N PHH 0.00000004381 0.61098 13.834
501 1G0N NDP 0.00000003573 0.60929 13.834
502 3RFV NAI 0.0000006961 0.53694 13.834
503 1RPN NDP 0.0000007902 0.49643 13.834
504 3RFV 15L 0.000008683 0.49043 13.834
505 5L95 AMP 0.0001887 0.42226 13.834
506 3H8V ATP 0.0001701 0.42009 13.834
507 3CGD COA 0.01703 0.40866 13.834
508 3CGD FAD 0.01703 0.40866 13.834
509 3CGD NAD 0.01703 0.40866 13.834
510 2RH4 EMO 0.0000002218 0.47272 14.2292
511 2XVE FAD 0.002157 0.43787 14.2292
512 2XVF FAD 0.001942 0.42073 14.2292
513 4D3F NAP 0.0005233 0.41043 14.2292
514 3LXD FAD 0.004475 0.40419 14.2292
515 3CH6 NAP 0.00000005249 0.63266 14.6245
516 3CH6 311 0.00000005249 0.63266 14.6245
517 3ZV6 NAD 0.000001094 0.46841 14.6245
518 3ZV6 4HB 0.000001189 0.4631 14.6245
519 3I6I NDP 0.00004483 0.4311 14.6245
520 3RKR NAP 0.000007777 0.42532 14.6245
521 4NTD FAD 0.005803 0.40301 14.6245
522 1EDO NAP 0.00000001905 0.60805 14.7541
523 2ZAT NAP 0.000006534 0.50654 15.0198
524 3NUG NAD 0.0000001622 0.57007 15.3846
525 5HJM MTA 0.006652 0.41215 15.415
526 5T2U NAP 0.000000141 0.57648 15.7258
527 1OC2 NAD 0.0000017 0.41501 15.8103
528 1OC2 TDX 0.0000017 0.41501 15.8103
529 1V59 FAD 0.004856 0.41285 15.8103
530 1PR9 NAP 0.00000008159 0.5857 15.9836
531 3D3W NAP 0.0000002382 0.56765 15.9836
532 4OOE NDP 0.0003267 0.44663 16.2055
533 1YS4 NAP 0.0001964 0.4242 16.2055
534 1O94 ADP 0.004607 0.4068 16.2055
535 1H5Q NAP 0.0000001115 0.55643 16.6008
536 3VPH NAD 0.000667 0.41006 17.3913
537 3VPH OXM 0.000757 0.40183 17.3913
538 2AQJ TRP 0.003438 0.42792 17.7866
539 2AQJ FAD 0.003578 0.42792 17.7866
540 3MQ2 SAH 0.01377 0.40435 17.8899
541 4PVD NDP 0.000004842 0.5016 18.1818
542 1LVL NAD 0.004839 0.41497 18.1818
543 2QZZ EMF 0.001184 0.43037 18.239
544 2QZZ NAP 0.001107 0.43037 18.239
545 5IN4 NAP 0.000009155 0.58478 20.1581
546 5IN4 6CK 0.000008968 0.58478 20.1581
547 5IN4 GDP 0.000009956 0.58182 20.1581
548 1HDO NAP 0.0000001126 0.53532 20.8738
549 4R1S NAP 0.000001707 0.53655 21.3439
550 3ICR FAD 0.00481 0.40518 21.7391
551 3ICS FAD 0.005352 0.4044 21.7391
552 5K6A NAP 0.00000003571 0.5931 25.6917
553 3JQ8 NAP 0.00000004973 0.58759 25.6917
554 2VZ0 NAP 0.000001207 0.5875 25.6917
555 2VZ0 D64 0.000001207 0.5875 25.6917
556 4CM9 NAP 0.00000005546 0.58578 25.6917
557 3JQ7 NAP 0.00000007517 0.58413 25.6917
558 3JQA NAP 0.00000007705 0.58372 25.6917
559 3BMQ NAP 0.00000003347 0.58328 25.6917
560 3JQF NAP 0.00000003507 0.58253 25.6917
561 3JQB NAP 0.00000008712 0.58165 25.6917
562 3JQG NAP 0.00000008897 0.5813 25.6917
563 5JDI NAP 0.00000006438 0.58104 25.6917
564 5JDC NAP 0.0000000658 0.58068 25.6917
565 5JCJ NAP 0.00000006839 0.58004 25.6917
566 4CME NAP 0.00000007089 0.57945 25.6917
567 3JQ9 NAP 0.000000095 0.57684 25.6917
568 4CLO NAP 0.00000006347 0.57598 25.6917
569 3BMN NAP 0.0000001035 0.57541 25.6917
570 3BMO NAP 0.0000000928 0.57499 25.6917
571 4CM8 NAP 0.00000009427 0.57473 25.6917
572 4CM4 NAP 0.0000001059 0.57282 25.6917
573 2WD7 NAP 0.0000001121 0.57187 25.6917
574 4CLR NAP 0.0000001121 0.57187 25.6917
575 4CMI NAP 0.0000001292 0.56952 25.6917
576 5JCJ 6JM 0.03083 0.40882 25.6917
577 4GLL NAD 0.0000006901 0.54784 26.4822
578 3A4V PYR 0.0000003591 0.50816 26.8775
579 3A4V NAD 0.0000003591 0.50816 26.8775
580 2WSB NAD 0.00000008935 0.59695 27.1654
581 1E7S NAP 0.0000001933 0.56918 27.2727
582 2Q1W NAD 0.0000005977 0.5233 28.0632
583 2BKA NDP 0.00000009222 0.5751 28.5124
584 3OID NDP 0.0000000424 0.59672 29.249
585 4TQG NDP 0.000000002947 0.63203 32.0158
586 5L4L NAP 0.0000002034 0.54078 36.7589
587 5L4L 7OX 0.000003213 0.53041 36.7589
588 2JL1 NAP 0.000003249 0.48716 36.7589
Pocket No.: 2; Query (leader) PDB : 2Q46; Ligand: NAP; Similar sites found: 27
This union binding pocket(no: 2) in the query (biounit: 2q46.bio1) has 26 residues
No: Leader PDB Ligand P-value (APoc) PS_Score (APoc) Sequence Similarity
1 1Z82 NDP 0.0008968 0.41366 2.7668
2 1F06 2NP 0.005414 0.41022 2.7668
3 1F06 NDP 0.005414 0.41022 2.7668
4 3ZNN 4WL 0.02222 0.40196 2.7668
5 3ZNN FAD 0.02222 0.40196 2.7668
6 1RL4 BL5 0.0007983 0.40869 3.19149
7 1CDO NAD 0.003407 0.40927 3.55731
8 2ZB4 NAP 0.009973 0.40233 3.55731
9 2ZB4 5OP 0.01054 0.40233 3.55731
10 1GUZ NAD 0.002324 0.41896 3.95257
11 1KOL NAD 0.007397 0.40676 4.0201
12 1O6Z NAD 0.001614 0.41917 4.34783
13 4MO2 FDA 0.00685 0.40924 4.34783
14 1U3U NAD 0.01312 0.40204 4.74308
15 1U3U BNF 0.01312 0.40204 4.74308
16 5N2I NAP 0.00112 0.41294 5.60345
17 1NVT NAP 0.00434 0.40196 5.92335
18 4MP8 NAD 0.003704 0.42054 6.71937
19 5BR7 FLC 0.01094 0.41843 7.90514
20 5BR7 FAD 0.01094 0.41843 7.90514
21 1O97 AMP 0.02101 0.40238 10.6719
22 1O97 FAD 0.02101 0.40238 10.6719
23 2QRK AMP 0.009647 0.40396 13.4387
24 3Q9T FAY 0.009399 0.40444 14.2292
25 3AI3 SOE 0.02736 0.40635 14.6245
26 2VUT NAD 0.001801 0.40688 17.3913
27 1TI7 NAP 0.002329 0.40364 17.3913
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