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Receptor
PDB id Resolution Class Description Source Keywords
2PFZ 1.8 Å NON-ENZYME: OTHER CRYSTAL STRUCTURE OF DCTP6, A BORDETELLA PERTUSSIS EXTRACYTOPLASMIC SOLUTE RECEPTOR BINDING PYROGLUTAMIC ACID BORDETELLA PERTUSSIS TOHAMA I EXTRACYTOPLASMIC SOLUTE RECEPTOR TRIPARTITE ATP INDEPENDENT PERIPLASMIC TRANSPORT PYROGLUTAMIC ACID LIGAND BINDING TRANSPORT PROTEIN
Ref.: CRYSTAL STRUCTURES OF TWO BORDETELLA PERTUSSIS PERIPLASMIC RECEPTORS CONTRIBUTE TO DEFINING A NOVEL PYROGLUTAMIC ACID BINDING DCTP SUBFAMILY. J.MOL.BIOL. V. 370 93 2007
Ligand
Ligand Chain:Residue Validity Ligand Warnings Binding Data NGL Viewer Molecular Weight (Da) Formula SMILES
PCA A:1;
Valid;
none;
submit data
129.114 C5 H7 N O3 C1CC(...
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90% Homology Family
Leader
PDB id Resolution Class Description Source Keywords
2PFZ 1.8 Å NON-ENZYME: OTHER CRYSTAL STRUCTURE OF DCTP6, A BORDETELLA PERTUSSIS EXTRACYTOPLASMIC SOLUTE RECEPTOR BINDING PYROGLUTAMIC ACID BORDETELLA PERTUSSIS TOHAMA I EXTRACYTOPLASMIC SOLUTE RECEPTOR TRIPARTITE ATP INDEPENDENT PERIPLASMIC TRANSPORT PYROGLUTAMIC ACID LIGAND BINDING TRANSPORT PROTEIN
Ref.: CRYSTAL STRUCTURES OF TWO BORDETELLA PERTUSSIS PERIPLASMIC RECEPTORS CONTRIBUTE TO DEFINING A NOVEL PYROGLUTAMIC ACID BINDING DCTP SUBFAMILY. J.MOL.BIOL. V. 370 93 2007
Members (1)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 1443 families.
1 2PFZ - PCA C5 H7 N O3 C1CC(=O)N[....
70% Homology Family (1)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 1205 families.
1 2PFZ - PCA C5 H7 N O3 C1CC(=O)N[....
50% Homology Family (2)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 1039 families.
1 2PFZ - PCA C5 H7 N O3 C1CC(=O)N[....
2 2PFY Kd = 0.3 uM PCA C5 H7 N O3 C1CC(=O)N[....
Polypharmacology
Similar Ligands
Ligand no: 1; Ligand: PCA; Similar ligands found: 1
No: Ligand ECFP6 Tc MDL keys Tc
1 PCA 1 1
Similar Binding Sites (Proteins are less than 50% similar to leader)
Pocket No.: 1; Query (leader) PDB : 2PFZ; Ligand: PCA; Similar sites found with APoc: 26
This union binding pocket(no: 1) in the query (biounit: 2pfz.bio1) has 11 residues
No: Leader PDB Ligand Sequence Similarity
1 1QPR PPC 2.11268
2 2ANY BAM 2.48963
3 1VLJ NAP 2.65781
4 1H5R G1P 2.73038
5 1H5T DAU 2.73038
6 1IIM TTP 2.73973
7 3P7I P7I 2.99003
8 4ZLA BES 3.32226
9 2WSB NAD 3.54331
10 5TCI 79V 3.62319
11 3UYK 0CX 3.65448
12 1W6P NDG GAL 3.73134
13 1W6O LAT 3.73134
14 6FKW PQQ 3.98671
15 1UNB AKG 3.98671
16 1XNK XS2 4.08163
17 2WCV FUC 4.28571
18 3H8G BES 4.65116
19 4I9A NCN 4.86111
20 5YJF SAH 5.28169
21 1N2X SAM 6.31229
22 2TPL HPP 6.64452
23 3HVJ 705 7.23982
24 2YMZ LAT 7.69231
25 2DSA GSH 7.88177
26 2B8T THM 16.5919
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