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Receptor
PDB id Resolution Class Description Source Keywords
2OM2 2.2 Å EC: 3.6.5.1 CRYSTAL STRUCTURE OF HUMAN G[ALPHA]I1 BOUND TO THE GOLOCO MOTIF OF RGS14 HOMO SAPIENS ARGININE FINGER RGS14 GOLOCO SIGNALING PROTEIN
Ref.: STRUCTURE-BASED PROTOCOL FOR IDENTIFYING MUTATIONS THAT ENHANCE PROTEIN-PROTEIN BINDING AFFINITIES. J.MOL.BIOL. V. 371 1392 2007
Ligand
Ligand Chain:Residue Validity Ligand Warnings Binding Data NGL Viewer Molecular Weight (Da) Formula SMILES
GDP A:355;
C:356;
Valid;
Valid;
none;
none;
submit data
443.201 C10 H15 N5 O11 P2 c1nc2...
MG A:800;
C:801;
Part of Protein;
Part of Protein;
none;
none;
submit data
24.305 Mg [Mg+2...
View in 3D viewer
90% Homology Family
Leader
PDB id Resolution Class Description Source Keywords
2OM2 2.2 Å EC: 3.6.5.1 CRYSTAL STRUCTURE OF HUMAN G[ALPHA]I1 BOUND TO THE GOLOCO MOTIF OF RGS14 HOMO SAPIENS ARGININE FINGER RGS14 GOLOCO SIGNALING PROTEIN
Ref.: STRUCTURE-BASED PROTOCOL FOR IDENTIFYING MUTATIONS THAT ENHANCE PROTEIN-PROTEIN BINDING AFFINITIES. J.MOL.BIOL. V. 371 1392 2007
Members (2)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 2 families.
1 2OM2 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
2 3ONW - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
70% Homology Family (2)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 2 families.
1 2OM2 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
2 3ONW - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
50% Homology Family (2)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 1 families.
1 2OM2 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
2 3ONW - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
Polypharmacology
Similar Ligands
Ligand no: 1; Ligand: GDP; Similar ligands found: 161
No: Ligand ECFP6 Tc MDL keys Tc
1 GDP 1 1
2 GTP 0.909091 1
3 GP3 0.881579 0.973684
4 GNH 0.858974 0.986667
5 9GM 0.839506 0.973684
6 GNP 0.839506 0.973684
7 G 0.828947 0.986486
8 5GP 0.828947 0.986486
9 G1R 0.82716 0.986667
10 GCP 0.82716 0.973684
11 GSP 0.817073 0.948718
12 GAV 0.797619 0.961039
13 GMV 0.792683 0.973684
14 G2P 0.77381 0.961039
15 G2R 0.770115 0.961039
16 GP2 0.756098 0.961039
17 GDC 0.747253 0.961039
18 GKE 0.747253 0.961039
19 GDD 0.747253 0.961039
20 GPG 0.741573 0.961039
21 G3D 0.732558 0.986486
22 ALF 5GP 0.729412 0.888889
23 Y9Z 0.728261 0.902439
24 G5P 0.723404 0.973684
25 GFB 0.72043 0.961039
26 GTG 0.72043 0.936709
27 GDR 0.72043 0.961039
28 G4P 0.715909 0.986486
29 G3A 0.712766 0.973684
30 6CK 0.712766 0.936709
31 GDP AF3 0.7 0.888889
32 ALF GDP 0.7 0.888889
33 GDP ALF 0.7 0.888889
34 YGP 0.698925 0.901235
35 GKD 0.697917 0.961039
36 JB2 0.697917 0.961039
37 GDX 0.690722 0.973684
38 GPD 0.690722 0.925
39 GMP 0.684211 0.88
40 0O2 0.666667 0.986486
41 JB3 0.656863 0.948718
42 NGD 0.650485 0.961039
43 DGI 0.636364 0.923077
44 GDP 7MG 0.636364 0.911392
45 U2G 0.634615 0.936709
46 GPX 0.634409 0.946667
47 G G 0.632653 0.948052
48 IDP 0.632184 0.972973
49 2MD 0.632075 0.891566
50 CAG 0.62963 0.880952
51 CG2 0.622642 0.936709
52 FEG 0.619048 0.879518
53 MGD 0.614679 0.891566
54 ZGP 0.613208 0.869048
55 GH3 0.612903 0.973333
56 3GP 0.611765 0.946667
57 MD1 0.607143 0.891566
58 PGD 0.59292 0.925
59 DGT 0.591398 0.923077
60 BGO 0.588785 0.924051
61 TPG 0.582609 0.840909
62 DBG 0.582609 0.948718
63 2GP 0.574713 0.96
64 FE9 0.570175 0.776596
65 GCP G 0.56 0.921053
66 A G 0.553571 0.935065
67 G A A A 0.553571 0.923077
68 MGP 0.553191 0.961039
69 U A G G 0.548673 0.935065
70 G4M 0.548387 0.880952
71 6G0 0.547368 0.961039
72 G1R G1R 0.542373 0.924051
73 P2G 0.527473 0.883117
74 PGD O 0.525 0.850575
75 ADP 0.522222 0.92
76 R5I 0.520833 0.946667
77 R7I 0.520833 0.946667
78 GGM 0.517544 0.901235
79 DGP 0.516484 0.910256
80 DG 0.516484 0.910256
81 P1G 0.516129 0.871795
82 G U 0.513274 0.9
83 G1G 0.508475 0.925
84 IMP 0.505495 0.959459
85 AKW 0.504425 0.890244
86 G C 0.504348 0.9
87 GPC 0.491525 0.879518
88 G7M 0.483871 0.948052
89 6AD 0.479592 0.841463
90 ATP 0.473684 0.92
91 HEJ 0.473684 0.92
92 G2Q 0.471154 0.961039
93 5FA 0.46875 0.92
94 AQP 0.46875 0.92
95 GTA 0.468468 0.936709
96 7DD 0.468085 0.906667
97 G G G RPC 0.466102 0.875
98 SGP 0.463158 0.82716
99 01G 0.462963 0.902439
100 HFD 0.459184 0.873418
101 B4P 0.457447 0.894737
102 AP5 0.457447 0.894737
103 A2D 0.456522 0.894737
104 6YZ 0.455446 0.896104
105 G G G C 0.455285 0.9125
106 5GP 5GP 0.454545 0.883117
107 ANP 0.454545 0.896104
108 ACQ 0.454545 0.896104
109 AT4 0.452632 0.884615
110 A G C C 0.451613 0.911392
111 APC G U 0.45082 0.886076
112 PRT 0.449541 0.959459
113 G U34 0.449153 0.888889
114 DG DG 0.448598 0.865854
115 ITT 0.447917 0.868421
116 BA3 0.446809 0.894737
117 C2E 0.444444 0.921053
118 PCG 0.444444 0.933333
119 35G 0.444444 0.933333
120 MGO 0.441176 0.864198
121 AN2 0.4375 0.907895
122 G C C C 0.4375 0.924051
123 M33 0.43299 0.883117
124 UCG 0.429688 0.911392
125 A G U 0.42963 0.888889
126 ACP 0.428571 0.896104
127 MGQ 0.424528 0.935897
128 AR6 0.424242 0.894737
129 7DT 0.424242 0.906667
130 APR 0.424242 0.894737
131 93A 0.42268 0.833333
132 A4P 0.420168 0.869048
133 G8D 0.42 0.875
134 AD9 0.42 0.896104
135 SAP 0.42 0.873418
136 AGS 0.42 0.873418
137 CA0 0.418367 0.896104
138 ATF 0.417476 0.884615
139 AGO 0.414634 0.888889
140 A G U U 0.414286 0.888889
141 NIA 0.413043 0.82716
142 MGV 0.412844 0.890244
143 TAT 0.411765 0.884615
144 T99 0.411765 0.884615
145 ADQ 0.411215 0.871795
146 A1R 0.411215 0.839506
147 RGT 0.410714 0.909091
148 CGP 0.409836 0.86747
149 C1Z 0.409091 0.986486
150 A 0.408602 0.893333
151 AMP 0.408602 0.893333
152 UP5 0.40678 0.873418
153 AMZ 0.406593 0.918919
154 C2R 0.406593 0.906667
155 JBT 0.405882 0.778947
156 A22 0.40566 0.907895
157 25L 0.405405 0.907895
158 ADX 0.40404 0.809524
159 8OD 0.401961 0.946667
160 50T 0.4 0.883117
161 4TC 0.4 0.851852
Similar Binding Sites (Proteins are less than 50% similar to leader)
Pocket No.: 1; Query (leader) PDB : 2OM2; Ligand: GDP; Similar sites found with APoc: 678
This union binding pocket(no: 1) in the query (biounit: 2om2.bio2) has 22 residues
No: Leader PDB Ligand Sequence Similarity
1 2Y8E GNP None
2 1YZQ GNP None
3 1GXU 2HP None
4 5KSP GDP 1.05263
5 4QOS ADP 1.13208
6 1SVM ATP 1.23077
7 3WYA GDP 1.53846
8 3WY9 GDP 1.53846
9 1TQ4 GDP 1.53846
10 5TSH ANP 1.53846
11 5TSH ADP 1.53846
12 2ZR9 DTP 1.53846
13 3IO3 ADP 1.53846
14 1X6V ADP 1.53846
15 1NST A3P 1.53846
16 2J5V PCA 1.53846
17 2B8W ALF 5GP 1.53846
18 2CBZ ATP 1.68776
19 3BD9 A3P 1.78571
20 5W7Q GDP 1.84615
21 5M7P ADP 1.84615
22 1NN5 ANP 1.86047
23 1NN5 2DT 1.86047
24 4PX9 ADP 2.05479
25 3E70 GDP 2.15385
26 3EZ2 ADP 2.15385
27 2GKS ADP 2.15385
28 4LJ9 ACP 2.15385
29 5I34 GDP 2.15385
30 2C9O ADP 2.15385
31 2ZPA ADP 2.15385
32 2Z3Y F2N 2.15385
33 3ZQ6 ADP ALF 2.16049
34 5WRI A3P 2.1875
35 1X1R GDP 2.24719
36 3BY9 SIN 2.30769
37 5WRJ A3P 2.31023
38 1Z2A GDP 2.38095
39 4WZ6 ATP 2.41379
40 1BG2 ADP 2.46154
41 2XT3 ADP 2.46154
42 5Y6N ADP 2.46154
43 4ZG4 VO4 ADP 2.46154
44 4YS0 ADP 2.46154
45 2XZ9 PYR 2.46914
46 1A4R GNH 2.6178
47 2NGR GDP 2.6178
48 1A4R GDP 2.6178
49 2WMO GTP 2.63158
50 4DDY DN6 2.6616
51 2Z5F A3P 2.68456
52 2GWH A3P 2.68456
53 2QQ0 ADP 2.71739
54 2QQ0 TMP 2.71739
55 2QQ0 ANP 2.71739
56 2QQ0 THM 2.71739
57 3EC1 GDP 2.76923
58 2RCN GDP 2.76923
59 5LB3 ADP 2.76923
60 3DZD ADP 2.76923
61 1E2K TMC 2.76923
62 2D7D ADP 2.76923
63 2BIF ANP 2.76923
64 2BIF SIN 2.76923
65 1F5N GNP 2.76923
66 5Z69 AGS 2.76923
67 5VHC BEF ADP 2.76923
68 2PEZ DAT 2.7933
69 2PEZ GGZ 2.7933
70 3VGL BGC 2.80374
71 3BER AMP 2.81124
72 3P4X ADP 2.90557
73 2FFQ GSP 2.92398
74 3FKQ ATP 2.94906
75 1GRN GDP 2.95567
76 6CS8 F9Y 2.9703
77 1U0J ADP 2.99625
78 3BFX A3P 3.04054
79 2PZE ATP 3.05677
80 5HCN GCP 3.06513
81 1V8K ANP 3.07692
82 4LYA ATP 3.07692
83 2OBM ADP 3.07692
84 1G41 ADP 3.07692
85 5H68 AGS 3.07692
86 5CX8 TG6 3.07692
87 5UIV ADP 3.0837
88 5MVR ADP 3.08642
89 3H86 AP5 3.125
90 4D81 ADP 3.18021
91 1NJF ADP 3.2
92 1NJF AGS 3.2
93 1B7T ADP 3.20513
94 4MZU TYD 3.20513
95 6B8B ADP 3.21285
96 4DID GDP 3.28947
97 3LRE ADP 3.38462
98 5M04 GDP 3.38462
99 5ZXD ATP 3.38462
100 4IEE AGS 3.38462
101 4PFO ADP 3.38462
102 3TBK ANP 3.38462
103 1XP8 AGS 3.38462
104 6ACS CIT 3.38462
105 1VJ7 GPX 3.38462
106 5URY PAM 3.42466
107 2QZ4 ADP 3.43511
108 3B7G ANP 3.47826
109 1OE0 TTP 3.47826
110 1G8S MET 3.47826
111 2GJ8 ALF GDP 3.48837
112 3UIE ANP 3.5
113 5ZB0 ADP 3.53535
114 5ZB0 TYD 3.53535
115 5TIV A3P 3.55731
116 1SQ5 ADP 3.57143
117 1KK8 BEF ADP 3.59712
118 4WEI GLC GAL 3.61011
119 1VHT BA3 3.66972
120 1GOJ ADP 3.69231
121 1QF5 GDP 3.69231
122 1QF5 RPL 3.69231
123 5IFS ADP 3.69231
124 1RJW ETF 3.69231
125 1R6B ADP 3.69231
126 4HSE ADP 3.69231
127 3HU3 AGS 3.69231
128 3TMK T5A 3.7037
129 1JI0 ATP 3.75
130 4GKY MAN 3.83142
131 2OFW ADX 3.84615
132 2ORV 4TA 3.84615
133 4FCW ADP 3.85852
134 5BYK OAQ 3.861
135 5BYK A3P 3.861
136 3A1S GDP 3.87597
137 2ZTS ADP 3.98406
138 3A4M ADP 4
139 2D2F ADP 4
140 1P9B GDP 4
141 1IHU AF3 4
142 1IHU ADP 4
143 4QDI ATP 4
144 4R98 GNH 4.05904
145 1H65 GDP 4.07407
146 3DKP ADP 4.08163
147 5X40 ACP 4.10959
148 1ION ADP 4.11523
149 3REF GDP 4.12371
150 1JXN MFU 4.13223
151 2FUE M1P 4.19847
152 6AIC AMP 4.20561
153 5OCQ CIT 4.21053
154 4NON GDP 4.23077
155 2WJG GDP 4.25532
156 1PUJ GNP 4.25532
157 2XTN GTP 4.2735
158 1G6H ADP 4.28016
159 2V2G BEZ 4.29185
160 5VGR GDP 4.30769
161 2HIM ASP 4.30769
162 4GOX A3P 4.47284
163 1S3G AP5 4.60829
164 2AWN ADP 4.61538
165 5MZN ADP 4.61538
166 4OHY ANP 4.61538
167 5TWB FAD 4.61538
168 2JLR ANP 4.61538
169 4GBM A3P 4.64396
170 2WJH GDP 4.81928
171 2WJH FLC 4.81928
172 2CHG ANP 4.86726
173 4LC1 GDP 4.92308
174 1P72 ADP 4.92308
175 5CK5 GDP 5.06329
176 1HTW ADP 5.06329
177 1ONI BEZ 5.07246
178 1L2T ATP 5.10638
179 1QF9 ALF 5.15464
180 1QF9 ADP 5.15464
181 1QF9 C5P 5.15464
182 1UJ2 ADP 5.15873
183 1UJ2 C5P 5.15873
184 3WXM GTP 5.23077
185 2XAU ADP 5.23077
186 4KBF AMP 5.23077
187 4R2I ANP 5.2381
188 5MEX PAP 5.2795
189 2HF9 GSP 5.30973
190 4WOP CTP 5.33333
191 1JJ7 ADP 5.38462
192 1AKY AP5 5.45455
193 2CDN ADP 5.47264
194 3CV2 OXL 5.53846
195 3BFV ADP 5.55556
196 5H4S RAM 5.55556
197 3TKL GTP 5.61225
198 5J1J ANP 5.61404
199 4YDS ATP 5.70175
200 4U00 ADP 5.7377
201 4E03 ADP 5.82524
202 1ZRH A3P 5.83942
203 5XQL C2E 5.84192
204 5KSZ GCP 5.84615
205 1XMV ADP 5.84615
206 5L3W GDP 5.88235
207 1VKJ A3P 5.96491
208 2KIN ADP 6
209 3FB4 AP5 6.01852
210 2F9L GDP 6.03015
211 3SFV GDP 6.07735
212 4KFU ACP 6.13208
213 4RD0 GDP 6.15385
214 4R43 GDP 6.15385
215 2DPY ADP 6.15385
216 5LV1 78T 6.15385
217 1OIV GDP 6.28272
218 1OIX GDP 6.28272
219 3NKV GNP 6.28571
220 1KO8 6PG 6.28571
221 3KJI ADP 6.29921
222 3QBT GNP 6.32184
223 4LHW GNP 6.32184
224 3TNF GNP 6.32184
225 1Z06 GNP 6.34921
226 3W5J GDP 6.37255
227 1UKZ ADP 6.40394
228 2W58 ADP 6.43564
229 1ZIN AP5 6.45161
230 1SKQ GDP 6.46154
231 3DEF GDP 6.46154
232 1G16 GDP 6.47059
233 3RWO GDP 6.48649
234 3RAB GNP 6.50888
235 1M7G AV2 6.63507
236 1M7G ADP 6.63507
237 1M7G ADX 6.63507
238 5K5Z ANP 6.6879
239 1DAK ADP 6.69643
240 1DAK DPU 6.69643
241 1Z0F GDP 6.70391
242 5JCZ GDP 6.70391
243 2OZE AGS 6.71141
244 1DCP HBI 6.73077
245 1VG8 GNP 6.76329
246 5BN3 ADP 6.76923
247 5FTB ANP 6.76923
248 5FHD ADP ALF 6.76923
249 1K6M AGS 6.76923
250 5LTJ ADP 6.76923
251 3RLF ANP 6.76923
252 5LTJ BEF 6.76923
253 1JJV ATP 6.79612
254 2HV8 GTP 6.97674
255 4TTQ ATP 6.97674
256 5XKT GNP 7
257 5UPK GNP 7.02703
258 1LVK MNT BEF 7.07692
259 1W4R TTP 7.07692
260 5G3Y ADP 7.07965
261 5G41 AP5 7.17489
262 2D7C GTP 7.18563
263 3GJ3 GDP 7.23982
264 3GJ0 GDP 7.23982
265 4ZNL BEF ADP 7.29927
266 6BSX GDP 7.30337
267 6BSX E7S 7.30337
268 1WF3 GNP 7.30897
269 4NU0 AP5 7.37327
270 4B47 GDP 7.38462
271 1F9V ADP 7.38462
272 1FNN ADP 7.38462
273 3CH5 GDP 7.40741
274 5BXQ GDP 7.40741
275 1D5C GDP 7.40741
276 1UAD GNP 7.42857
277 4LPS GDP 7.43802
278 1G7C 5GP 7.44681
279 1YOE RIB 7.45342
280 1TU3 GNP 7.60234
281 4QM7 GTP 7.60234
282 2YOH WMJ 7.61905
283 2A9K GDP 7.62332
284 1R2Q GNP 7.64706
285 3Q85 GNP 7.69231
286 1U8Z GDP 7.7381
287 3MJH GTP 7.7381
288 1S8F GDP 7.9096
289 4ITR GDP 7.91139
290 2FH5 GTP 7.94393
291 5XC5 GTP 7.95455
292 4BQS ADP 7.95455
293 4BQS K2Q 7.95455
294 4YC7 GNP 8
295 4XVU ATP 8
296 2WOJ ADP ALF 8
297 1G3Q ADP 8.01688
298 5U32 GDP 8.05085
299 1LVG ADP 8.08081
300 1D2N ANP 8.08823
301 4JLV ADP 8.17844
302 5WDR GNP 8.18713
303 1Z08 GNP 8.23529
304 1YVD GNP 8.28402
305 4J0Q GDP 8.33333
306 1KK1 GNP 8.33333
307 1T5C ADP 8.33333
308 4KVG GTP 8.33333
309 3EWA ANP 8.33333
310 3Q9L ATP 8.33333
311 1W5T ANP 8.33333
312 1W5T ADP 8.33333
313 4OTK MLI 8.33333
314 4WZ8 3W7 8.33333
315 3QKT ANP 8.33333
316 4CVN ADP 8.37696
317 1QHH ATP 8.38323
318 1CLU DBG 8.43373
319 5IRR GSP 8.44156
320 5OCG GNP 8.46561
321 5SZH GNP 8.49673
322 2WKQ GTP 8.61539
323 6H5E ANP 8.61539
324 2HT6 GDP 8.62069
325 1OFH ADP 8.62069
326 1F2U ATP 8.72483
327 5H67 ATP 8.75
328 1KAO GDP 8.98204
329 1GUA GNP 8.98204
330 4HDO GNP 8.98204
331 3X1Z GNP 8.98204
332 4HDQ GNP 8.98204
333 3E5H GNP 8.98876
334 4U5X GNP 8.98876
335 2CJW GDP 9.375
336 5JCP GDP ALF 9.53846
337 5E5U MLI 9.54774
338 3BC1 GNP 9.74359
339 5GVR LMR 9.82906
340 4LX0 BEF GDP 10.1538
341 1NF3 GNP 10.1562
342 3CPJ GDP 10.3139
343 1ZC3 GNP 10.6195
344 5W75 GDP 10.7692
345 4DCT GDP 10.7692
346 2WHX ADP 10.7692
347 6FA4 GNP 11.0769
348 5L3V GDP 11.1111
349 1IBR GNP 11.1111
350 5L3S GNP 11.1111
351 1YTM ATP 11.1111
352 5N69 ADP 11.1111
353 5NM7 GLY 11.1111
354 3NHB ADP 11.1111
355 4ZDJ UTP 11.1111
356 2GDJ ANP 11.1111
357 3FYH ADP 11.1111
358 3IUY AMP 11.1111
359 5WLB GNP 11.3846
360 5UQW GDP 11.3846
361 5O2T GSP 11.3846
362 2GK6 ADP 11.6923
363 1VG1 GDP 11.8919
364 1BO4 COA 11.9048
365 1Z0A GDP 12.069
366 3KTA AP5 12.0879
367 1XEX ATP 12.0879
368 2ZE7 DST 12.253
369 5E95 GDP 12.6154
370 1WQ1 GDP 12.6154
371 6D5J GNP 12.6154
372 6D5E GNP 12.6154
373 6BVJ GNP 12.6154
374 6D5H GNP 12.6154
375 6D5G GNP 12.6154
376 6BVK GNP 12.6154
377 2UZI GTP 12.6154
378 1NVV GNP 12.6154
379 3DDC GNP 12.6154
380 6BVL GNP 12.6154
381 6D59 GNP 12.6154
382 6D56 GNP 12.6154
383 6D5L GNP 12.6154
384 6D5M GNP 12.6154
385 6D55 GNP 12.6154
386 6BVI GNP 12.6154
387 6D5V GNP 12.6154
388 6BVM GNP 12.6154
389 1KY3 GDP 12.6374
390 2C5L GTP 12.8205
391 3QVV 3QV 13.2203
392 3QVV A3P 13.2203
393 4TMK T5A 13.615
394 1NRJ GTP 13.7615
395 1RYH GNP 13.7931
396 5H7J GCP 13.8889
397 5H7K GDP 13.8889
398 5GOE GDP 13.8889
399 4HAT GNP 13.8889
400 5UWP GNP 13.8889
401 6CIT GNP 13.8889
402 5DHF GNP 13.8889
403 5UWT GNP 13.8889
404 5UWH GNP 13.8889
405 5DIF GNP 13.8889
406 5UWW GNP 13.8889
407 5UWI GNP 13.8889
408 5UWJ GNP 13.8889
409 5DI9 GNP 13.8889
410 2CE7 ADP 13.8889
411 3ZFD ANP 13.8889
412 4MKG AP5 13.8889
413 3L6C MLI 13.8889
414 1KMQ GNP 14.1304
415 5XDR ADP 14.1538
416 4XOI GTP 14.4444
417 3Q72 GNP 14.4578
418 1XKV ATP 14.4615
419 1B0U ATP 14.5038
420 1DS6 GDP 14.5833
421 1E96 GTP 14.5833
422 3KUD GDP 14.8148
423 4C4P GNP 14.9533
424 5UWU GNP 15
425 1Z0J GTP 15.2542
426 3GJ7 GDP 15.3846
427 3GJ4 GDP 15.3846
428 3GJ5 GDP 15.3846
429 3GJ8 GDP 15.3846
430 2QG6 NMN 15.5779
431 2IS6 ADP 15.6923
432 4TL6 ANP 15.8103
433 4D0G GTP 15.942
434 1Y63 ADP 16.3043
435 4P3Y GDP 16.6667
436 3U6B GDP 16.6667
437 5W76 GDP 16.6667
438 5JBQ GDP 16.6667
439 1D8T GDP 16.6667
440 3U6K GDP 16.6667
441 5O74 GDP 16.6667
442 2BVN GNP 16.6667
443 4PC3 GDP 16.6667
444 4HI0 GDP 16.6667
445 2C77 GNP 16.6667
446 2C78 GNP 16.6667
447 3H4S ADP 16.6667
448 4PPF FLC 16.6667
449 4G5G GDP 16.6667
450 3COB ADP 16.6667
451 2HCJ GDP 16.6667
452 1YQT ADP 16.6667
453 2EFE GNH 16.6667
454 5IRC GDP 16.6667
455 2ZEJ GDP 16.6667
456 3ZIA ATP 16.6667
457 1IWE IMP 16.6667
458 3ZIA ADP 16.6667
459 2PL3 ADP 16.6667
460 5AK0 8V1 16.6667
461 4RZ3 ADP 16.6667
462 4MKF AP5 16.6667
463 5IRN ADP 16.6667
464 2FNA ADP 16.6667
465 5HR5 ADP 16.6667
466 4FRZ ADP 16.6667
467 2Q2Y ADP 16.6667
468 2Q2Y MKR 16.6667
469 1OYY AGS 16.6667
470 5I0H ADP BEF 16.6667
471 1NHX FTB 16.6667
472 1NHX PEP 16.6667
473 4YMU ATP 16.6667
474 1NY5 ADP 16.6667
475 1T8U UAP SGN IDS SGN 16.6667
476 1T8U A3P 16.6667
477 2ZPT A3P 16.6667
478 2GMV PEP 16.6667
479 2GMV UN8 16.6667
480 5YV5 ADP 16.6667
481 4PJ3 ANP 16.6667
482 5J1S ATP 16.6667
483 6GAS FAD 16.6667
484 3LXR GDP 16.7568
485 1CXZ GSP 17.033
486 4DKX GDP 17.1296
487 4XSH GSP 17.3184
488 3BOS CDP 17.3554
489 1TX4 ALF GDP 17.5141
490 3T1O GDP 17.6768
491 3T12 GDP ALF 17.6768
492 3IIJ ADP 17.7778
493 1SVI GDP 17.9487
494 1LFD GNP 18.3908
495 4ZI2 GNP 18.4211
496 4GOJ GNP 18.5185
497 5UWR GNP 18.5185
498 3LN9 FLC 18.705
499 4XTR ADP 18.9189
500 4XTR ATP 18.9189
501 1FZQ GDP 19.337
502 2GCO GNP 19.403
503 2GCN GDP 19.403
504 3CNL GNP 19.4444
505 6G14 G4P 19.4444
506 2VVG ADP 19.4444
507 4D0N GDP 19.4444
508 3VMF GTP 19.4444
509 3B9Q MLI 19.4444
510 1WDT GTP 19.4444
511 2OG2 MLI 19.4444
512 6BCA GSP 19.4444
513 3T34 GDP 19.4444
514 3FWY ADP 19.4444
515 5WC2 ADP 19.4444
516 5BQ5 ADP BEF 19.4444
517 6DEF GCP 19.4444
518 5L3R GCP 19.4444
519 3VM7 GLC 19.4444
520 4BFW ZVW 19.4444
521 2IXE ATP 19.4444
522 4IOK XPO 19.4444
523 3FVQ ATP 19.4444
524 4IOK ADP 19.4444
525 2O0J ADP 19.4444
526 1PCA CIT 19.4444
527 1ZJ6 G3D 20.3209
528 3DOE GTP 20.8333
529 4OI4 ATP 20.8696
530 5DI3 GNP 21.0811
531 1KSH GDP 21.5054
532 3T5G GDP 21.7105
533 5TB5 GDP 22
534 4BAS GNP 22.2222
535 1G7S GDP 22.2222
536 1D2E GDP 22.2222
537 2A5J GDP 22.2222
538 4H1V GNP 22.2222
539 2BCG GDP 22.2222
540 3B5J 12D 22.2222
541 4K81 GTP 22.2222
542 2ZFI ADP 22.2222
543 2EW1 GNP 22.2222
544 1EK0 GNP 22.2222
545 1YZN GNP 22.2222
546 6C90 ADP 22.2222
547 1IN4 ADP 22.2222
548 1Z6T ADP 22.2222
549 1ZUI SKM 22.2222
550 5W3Y ACO 22.2222
551 5TAR GDP 22.2973
552 1YZG GDP 22.3464
553 5LEF GTP 22.5131
554 5UWQ GNP 22.7273
555 4V0K GDP 23.0769
556 1ZD9 GDP 23.4043
557 1M2O GNP 23.6842
558 5KUT GDP 23.8095
559 1MR3 G3D 24.3094
560 2X77 GDP 24.8677
561 3MD0 GDP 25
562 2Y65 ADP 25
563 4M9Q GNP 25
564 1WA5 GTP 25
565 4TMZ GSP 25
566 3TK1 GDP 25
567 4NCN GTP 25
568 6BC0 GSP 25
569 3PQC GDP 25
570 4YJ1 ADP 25
571 1R0X ATP 25
572 4Q1A 2XZ 25
573 4Q1A UDP 25
574 1W0J ADP 25
575 2BEK ATP 25
576 6B4K ANP 25
577 1W7J ADP BEF 25
578 1Z83 AP5 25
579 1W0J ADP BEF 25
580 1CR1 TTP 25
581 1OS1 ATP 25
582 3QF7 ANP 25
583 1OS1 PYR 25
584 3R7F CP 25
585 2ZJ5 ADP 25
586 4IV9 FAD 25
587 4LHD GLY 25
588 1VG9 GDP 25.2308
589 1VG0 GDP 25.2308
590 1F6B GDP 25.2525
591 1UPT GTP 25.731
592 2BME GNP 25.8065
593 2VB6 ADP BEF 26.1745
594 3ZS9 ADP ALF 26.3158
595 5EE5 GTP 26.9006
596 2QTV GNP 26.9461
597 3AQ4 GDP 27.1739
598 4YLG GDP 27.7457
599 5FG3 GDP 27.7778
600 5YT0 GDP 27.7778
601 1YRB GDP 27.7778
602 1RRC ADP 27.7778
603 4AG5 ADP 27.7778
604 4P4T GDP 27.7778
605 6BCB GSP 27.7778
606 1XX6 ADP 27.7778
607 1G6O ADP 27.7778
608 4XGU ADP 27.7778
609 2QEN ADP 27.7778
610 4A4Z ANP 27.7778
611 2A5F GTP 28
612 4KAX GTP 28.4024
613 1R4A GNP 28.4848
614 1I4D GDP 28.6458
615 2W83 GTP 29.0909
616 3SBD GNP 29.4118
617 1MH1 GNP 29.5699
618 1G4U GDP 29.8913
619 3N5C GDP 30.2469
620 3PCR GTP 30.2469
621 3WYG GTP 30.5556
622 3WYF GTP 30.5556
623 3M1I GTP 30.5556
624 3DC4 ADP 30.5556
625 1OXV ANP 30.5556
626 4KVA GTP 30.5556
627 4NE2 ADP 30.5556
628 4NE2 SH2 30.5556
629 2NCD ADP 30.5556
630 2FSH ANP 30.5556
631 2CDC XYS 30.5556
632 1G3M A3P 30.5556
633 1G3M PCQ 30.5556
634 2FJU GSP 30.8989
635 1HE1 GDP 31.25
636 2J0V GDP 32.5472
637 1Z0K GTP 33.1395
638 1RE0 GDP 33.3333
639 1S9D GDP 33.3333
640 1MKY GDP 33.3333
641 1O3Y GTP 33.3333
642 2J59 GTP 33.3333
643 1J2J GTP 33.3333
644 6A20 ADP 33.3333
645 4V03 ADP 33.3333
646 1FP6 ADP 33.3333
647 4X8O AP5 33.3333
648 2CK3 ANP 33.3333
649 5ZBR ANP 33.3333
650 2FAH GDP 33.3333
651 2RGX AP5 33.3333
652 2V7Q ATP 33.3333
653 3QXC ATP 33.3333
654 6FAA ADP 33.3333
655 4IDN GNP 33.3333
656 2V7Q ADP 33.3333
657 2CK3 ADP 33.3333
658 1AQU A3P 33.3333
659 5OEC GDP 34.4262
660 2VOH CIT 34.6154
661 4IHQ ADP 36.1111
662 1OW3 GDP 36.1111
663 5Z2M GTP 36.1111
664 3GJX GTP 36.1111
665 3RC3 ANP 36.1111
666 2W2X GSP 38.7097
667 2G77 GDP 38.8889
668 5HPY GDP 38.8889
669 3VX3 ADP 38.8889
670 2G77 AF3 38.8889
671 5UWS GNP 40.9091
672 2IYL GDP 41.6667
673 1RJ9 GCP 41.6667
674 5EXT ADP 41.6667
675 2QN6 GDP 44.4444
676 1M7B GTP 44.4444
677 1GWN GTP 44.4444
678 5UWO GNP 45
679 2WIC GNP 50
680 1DAR GDP 50
681 4ZKD GDP 50
Pocket No.: 2; Query (leader) PDB : 2OM2; Ligand: GDP; Similar sites found with APoc: 29
This union binding pocket(no: 2) in the query (biounit: 2om2.bio1) has 24 residues
No: Leader PDB Ligand Sequence Similarity
1 5J47 6JJ 1.23077
2 3ITJ CIT 2.15385
3 1Q19 SSC 2.15385
4 5TXR PLP 2.15385
5 1PNF NDG NAG 2.54777
6 4DE2 DN3 2.6616
7 1A99 PUT 2.76923
8 1POT SPD 2.76923
9 3ZL8 ADP 2.76923
10 1QHG ATP 2.76923
11 1CT9 GLN 3.38462
12 5A1S FLC 3.38462
13 1PVN MZP 3.69231
14 1NXJ TLA 3.82514
15 4JLS 3ZE 3.94737
16 3ZZH ARG 5.21173
17 2J73 GLC GLC GLC GLC 5.82524
18 1FWV SGA MAG FUC 5.97015
19 2OFD NGA 6.33803
20 2OFE NAG 6.33803
21 2X7I CIT 6.49351
22 1XPJ TLA 7.14286
23 1TIQ COA 7.77778
24 2VGK REZ 8.33333
25 4J6W CTP 9.7561
26 2IDO TMP 10.8434
27 4PYA 2X3 11.1111
28 2V5K OXM 16.6667
29 1V6A TRE 22.2222
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