Receptor
PDB id Resolution Class Description Source Keywords
2OAT 1.95 Å EC: 2.6.1.13 ORNITHINE AMINOTRANSFERASE COMPLEXED WITH 5-FLUOROMETHYLORNI HOMO SAPIENS AMINOTRANSFERASE 5-FLUOROMETHYLORNITHINE PLP-DEPENDENT ENZPYRIDOXAL PHOSPHATE
Ref.: CRYSTAL STRUCTURE OF HUMAN ORNITHINE AMINOTRANSFERA COMPLEXED WITH THE HIGHLY SPECIFIC AND POTENT INHIB 5-FLUOROMETHYLORNITHINE. J.MOL.BIOL. V. 285 297 1999
Ligand
Ligand Chain:Residue Validity Ligand Warnings Binding Data NGL Viewer Molecular Weight (Da) Formula SMILES
PFM A:440;
B:440;
C:440;
Valid;
Valid;
Valid;
none;
none;
none;
submit data
374.283 C14 H19 N2 O8 P Cc1c(...
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90% Homology Family
Leader
PDB id Resolution Class Description Source Keywords
2OAT 1.95 Å EC: 2.6.1.13 ORNITHINE AMINOTRANSFERASE COMPLEXED WITH 5-FLUOROMETHYLORNI HOMO SAPIENS AMINOTRANSFERASE 5-FLUOROMETHYLORNITHINE PLP-DEPENDENT ENZPYRIDOXAL PHOSPHATE
Ref.: CRYSTAL STRUCTURE OF HUMAN ORNITHINE AMINOTRANSFERA COMPLEXED WITH THE HIGHLY SPECIFIC AND POTENT INHIB 5-FLUOROMETHYLORNITHINE. J.MOL.BIOL. V. 285 297 1999
Members (3)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 1 families.
1 1GBN - GBC PLP n/a n/a
2 2CAN - CAN PLP n/a n/a
3 2OAT - PFM C14 H19 N2 O8 P Cc1c(c(c(c....
70% Homology Family (3)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 1 families.
1 1GBN - GBC PLP n/a n/a
2 2CAN - CAN PLP n/a n/a
3 2OAT - PFM C14 H19 N2 O8 P Cc1c(c(c(c....
50% Homology Family (3)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 1 families.
1 1GBN - GBC PLP n/a n/a
2 2CAN - CAN PLP n/a n/a
3 2OAT - PFM C14 H19 N2 O8 P Cc1c(c(c(c....
Polypharmacology
Similar Ligands
Ligand no: 1; Ligand: PFM; Similar ligands found: 36
No: Ligand ECFP6 Tc MDL keys Tc
1 PFM 1 1
2 AN7 0.628571 0.839286
3 FOO 0.619718 0.877193
4 Z98 0.55 0.868852
5 KOU 0.525641 0.803279
6 LLP 0.517647 0.854839
7 PL5 0.517647 0.898305
8 PLP 0.514706 0.803571
9 F0G 0.512821 0.827586
10 PZP 0.507246 0.775862
11 PUS 0.5 0.764706
12 0JO 0.5 0.864407
13 4LM 0.5 0.847458
14 FEV 0.4875 0.833333
15 5DK 0.483146 0.8125
16 EQJ 0.483146 0.8125
17 PL6 0.481928 0.847458
18 EVM 0.481481 0.790323
19 FEJ 0.47619 0.786885
20 EPC 0.461538 0.793103
21 MPM 0.45679 0.783333
22 P70 0.449438 0.830508
23 EXT 0.4375 0.770492
24 P3D 0.428571 0.765625
25 P0P 0.418919 0.77193
26 6DF 0.413793 0.75
27 PL4 0.413043 0.828125
28 HCP 0.411765 0.746032
29 P89 0.408602 0.671429
30 PLR 0.408451 0.754386
31 PXP 0.405405 0.704918
32 PDA 0.404762 0.793651
33 PP3 0.404762 0.793651
34 PDD 0.404762 0.793651
35 PLT 0.40404 0.793651
36 PMP 0.4 0.770492
Similar Binding Sites (Proteins are less than 50% similar to leader)
Pocket No.: 1; Query (leader) PDB : 2OAT; Ligand: PFM; Similar sites found with APoc: 5
This union binding pocket(no: 1) in the query (biounit: 2oat.bio1) has 20 residues
No: Leader PDB Ligand Sequence Similarity
1 5DDW 5B6 23.2346
2 4ADC PLP 46.3054
3 4UOX PLP PUT 47.1526
4 4UOX PUT 47.1526
5 1SFF IK2 49.2958
Pocket No.: 2; Query (leader) PDB : 2OAT; Ligand: PFM; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 2) in the query (biounit: 2oat.bio1) has 20 residues
No: Leader PDB Ligand Sequence Similarity
Pocket No.: 3; Query (leader) PDB : 2OAT; Ligand: PFM; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 3) in the query (biounit: 2oat.bio1) has 20 residues
No: Leader PDB Ligand Sequence Similarity
Pocket No.: 4; Query (leader) PDB : 2OAT; Ligand: PFM; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 4) in the query (biounit: 2oat.bio1) has 19 residues
No: Leader PDB Ligand Sequence Similarity
Pocket No.: 5; Query (leader) PDB : 2OAT; Ligand: PFM; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 5) in the query (biounit: 2oat.bio2) has 20 residues
No: Leader PDB Ligand Sequence Similarity
Pocket No.: 6; Query (leader) PDB : 2OAT; Ligand: PFM; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 6) in the query (biounit: 2oat.bio2) has 19 residues
No: Leader PDB Ligand Sequence Similarity
Pocket No.: 7; Query (leader) PDB : 2OAT; Ligand: PFM; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 7) in the query (biounit: 2oat.bio3) has 20 residues
No: Leader PDB Ligand Sequence Similarity
Pocket No.: 8; Query (leader) PDB : 2OAT; Ligand: PFM; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 8) in the query (biounit: 2oat.bio3) has 20 residues
No: Leader PDB Ligand Sequence Similarity
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