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- Structure Biounit | Ligand Information
- PDB : .ZIP | .CSV
- Family 90% : .ZIP | .CSV
- Class : .ZIP | .CSV
No: | PDB id | Binding Data | Representative ligand | Formula | Smiles |
---|---|---|---|---|---|
The Class containing this family consists of a total of 5 families. | |||||
1 | 1TJP | - | HPF | C9 H14 N O7 P | c1ccc(c(c1.... |
2 | 1QOQ | - | IGP | C11 H14 N O6 P | c1ccc2c(c1.... |
3 | 4Y6G | - | F6F | C10 H11 F3 N O6 P | c1cc(ccc1C.... |
4 | 1K8Y | - | 13P | C3 H7 O6 P | C(C(=O)COP.... |
5 | 2CLM | - | PLS | C11 H17 N2 O8 P | Cc1c(c(c(c.... |
6 | 2TYS | - | PLT | C19 H20 N3 O7 P | Cc1c(c(c(c.... |
7 | 1KFC | - | IPL | C11 H14 N O4 P | c1ccc2c(c1.... |
8 | 1C8V | ic50 = 472 nM | HE1 | C10 H13 O4 P S | c1ccc(c(c1.... |
9 | 4KKX | - | F6F | C10 H11 F3 N O6 P | c1cc(ccc1C.... |
10 | 2CLL | - | PLS | C11 H17 N2 O8 P | Cc1c(c(c(c.... |
11 | 3CEP | - | G3P IDM | n/a | n/a |
12 | 2TRS | - | PLS | C11 H17 N2 O8 P | Cc1c(c(c(c.... |
13 | 1KFJ | - | PLS | C11 H17 N2 O8 P | Cc1c(c(c(c.... |
14 | 4HPX | - | F9F | C9 H11 F3 N O7 P S | c1cc(ccc1O.... |
15 | 1A5S | Kd = 0.35 uM | FIP | C11 H13 F N O4 P | c1cc2c(cc1.... |
16 | 2CLI | Kd = 50 uM | F9F | C9 H11 F3 N O7 P S | c1cc(ccc1O.... |
17 | 5BW6 | - | F6F | C10 H11 F3 N O6 P | c1cc(ccc1C.... |
18 | 3PR2 | - | F9F | C9 H11 F3 N O7 P S | c1cc(ccc1O.... |
19 | 1K8Z | - | IAG | C12 H12 N2 O3 | c1ccc2c(c1.... |
20 | 1CW2 | ic50 = 715 nM | HSP | C10 H15 O5 P S | c1ccc(c(c1.... |
21 | 1KFE | - | PLS | C11 H17 N2 O8 P | Cc1c(c(c(c.... |
22 | 2J9X | - | G3P | C3 H9 O6 P | C([C@H](CO.... |
23 | 1BEU | - | PLS | C11 H17 N2 O8 P | Cc1c(c(c(c.... |
24 | 4HT3 | - | F9F | C9 H11 F3 N O7 P S | c1cc(ccc1O.... |
25 | 2CLK | Kd = 164 uM | G3H | C3 H7 O6 P | C([C@H](C=.... |
26 | 1A50 | Kd = 0.35 uM | FIP | C11 H13 F N O4 P | c1cc2c(cc1.... |
27 | 2CLH | Kd = 87.6 uM | F19 | C12 H14 N O6 P S | c1ccc2cc(c.... |
28 | 1C29 | ic50 = 472 nM | HE1 | C10 H13 O4 P S | c1ccc(c(c1.... |
29 | 1QOP | - | IPL | C11 H14 N O4 P | c1ccc2c(c1.... |
30 | 1K7E | - | IAG | C12 H12 N2 O3 | c1ccc2c(c1.... |
31 | 1FUY | - | FIP | C11 H13 F N O4 P | c1cc2c(cc1.... |
32 | 1A5B | - | IGP | C11 H14 N O6 P | c1ccc2c(c1.... |
33 | 2J9Y | - | FOO | C11 H13 N2 O7 P | Cc1c(c(c(c.... |
34 | 4ZQC | - | F6F | C10 H11 F3 N O6 P | c1cc(ccc1C.... |
35 | 1KFB | - | IGP | C11 H14 N O6 P | c1ccc2c(c1.... |
36 | 2CLE | Kd = 280 uM | F6F | C10 H11 F3 N O6 P | c1cc(ccc1C.... |
37 | 1CX9 | ic50 = 178 nM | NHP | C10 H16 N O3 P S | c1ccc(c(c1.... |
38 | 2CLO | - | PLS | C11 H17 N2 O8 P | Cc1c(c(c(c.... |
39 | 1WBJ | Kd = 0.31 mM | G3P | C3 H9 O6 P | C([C@H](CO.... |
40 | 1K3U | - | IAD | C14 H14 N2 O5 | c1ccc2c(c1.... |
41 | 2CLF | Kd = 280 uM | F6F | C10 H11 F3 N O6 P | c1cc(ccc1C.... |
42 | 4HN4 | - | F9F | C9 H11 F3 N O7 P S | c1cc(ccc1O.... |
43 | 1UBS | - | SER PLP | n/a | n/a |
44 | 1K7F | - | IAV | C15 H18 N2 O3 | CC(C)[C@@H.... |
45 | 2TSY | - | PLS | C11 H17 N2 O8 P | Cc1c(c(c(c.... |
46 | 4HPJ | - | 1D0 | C17 H20 N3 O8 P | Cc1c(c(c(c.... |
47 | 1C9D | ic50 = 499 nM | HF1 | C10 H12 F O4 P S | c1cc(c(cc1.... |
48 | 4WX2 | - | F6F | C10 H11 F3 N O6 P | c1cc(ccc1C.... |
49 | 6AM8 | - | TRP | C11 H12 N2 O2 | c1ccc2c(c1.... |
50 | 6CUZ | - | FEV | C13 H17 N2 O7 P | CC/C=C(C(=.... |
No: | PDB id | Binding Data | Representative ligand | Formula | Smiles |
---|---|---|---|---|---|
The Class containing this family consists of a total of 4 families. | |||||
1 | 1TJP | - | HPF | C9 H14 N O7 P | c1ccc(c(c1.... |
2 | 1QOQ | - | IGP | C11 H14 N O6 P | c1ccc2c(c1.... |
3 | 4Y6G | - | F6F | C10 H11 F3 N O6 P | c1cc(ccc1C.... |
4 | 1K8Y | - | 13P | C3 H7 O6 P | C(C(=O)COP.... |
5 | 2CLM | - | PLS | C11 H17 N2 O8 P | Cc1c(c(c(c.... |
6 | 2TYS | - | PLT | C19 H20 N3 O7 P | Cc1c(c(c(c.... |
7 | 1KFC | - | IPL | C11 H14 N O4 P | c1ccc2c(c1.... |
8 | 1C8V | ic50 = 472 nM | HE1 | C10 H13 O4 P S | c1ccc(c(c1.... |
9 | 4KKX | - | F6F | C10 H11 F3 N O6 P | c1cc(ccc1C.... |
10 | 2CLL | - | PLS | C11 H17 N2 O8 P | Cc1c(c(c(c.... |
11 | 3CEP | - | G3P IDM | n/a | n/a |
12 | 2TRS | - | PLS | C11 H17 N2 O8 P | Cc1c(c(c(c.... |
13 | 1KFJ | - | PLS | C11 H17 N2 O8 P | Cc1c(c(c(c.... |
14 | 4HPX | - | F9F | C9 H11 F3 N O7 P S | c1cc(ccc1O.... |
15 | 1A5S | Kd = 0.35 uM | FIP | C11 H13 F N O4 P | c1cc2c(cc1.... |
16 | 2CLI | Kd = 50 uM | F9F | C9 H11 F3 N O7 P S | c1cc(ccc1O.... |
17 | 5BW6 | - | F6F | C10 H11 F3 N O6 P | c1cc(ccc1C.... |
18 | 3PR2 | - | F9F | C9 H11 F3 N O7 P S | c1cc(ccc1O.... |
19 | 1K8Z | - | IAG | C12 H12 N2 O3 | c1ccc2c(c1.... |
20 | 1CW2 | ic50 = 715 nM | HSP | C10 H15 O5 P S | c1ccc(c(c1.... |
21 | 1KFE | - | PLS | C11 H17 N2 O8 P | Cc1c(c(c(c.... |
22 | 2J9X | - | G3P | C3 H9 O6 P | C([C@H](CO.... |
23 | 1BEU | - | PLS | C11 H17 N2 O8 P | Cc1c(c(c(c.... |
24 | 4HT3 | - | F9F | C9 H11 F3 N O7 P S | c1cc(ccc1O.... |
25 | 2CLK | Kd = 164 uM | G3H | C3 H7 O6 P | C([C@H](C=.... |
26 | 1A50 | Kd = 0.35 uM | FIP | C11 H13 F N O4 P | c1cc2c(cc1.... |
27 | 2CLH | Kd = 87.6 uM | F19 | C12 H14 N O6 P S | c1ccc2cc(c.... |
28 | 1C29 | ic50 = 472 nM | HE1 | C10 H13 O4 P S | c1ccc(c(c1.... |
29 | 1QOP | - | IPL | C11 H14 N O4 P | c1ccc2c(c1.... |
30 | 1K7E | - | IAG | C12 H12 N2 O3 | c1ccc2c(c1.... |
31 | 1FUY | - | FIP | C11 H13 F N O4 P | c1cc2c(cc1.... |
32 | 1A5B | - | IGP | C11 H14 N O6 P | c1ccc2c(c1.... |
33 | 2J9Y | - | FOO | C11 H13 N2 O7 P | Cc1c(c(c(c.... |
34 | 4ZQC | - | F6F | C10 H11 F3 N O6 P | c1cc(ccc1C.... |
35 | 1KFB | - | IGP | C11 H14 N O6 P | c1ccc2c(c1.... |
36 | 2CLE | Kd = 280 uM | F6F | C10 H11 F3 N O6 P | c1cc(ccc1C.... |
37 | 1CX9 | ic50 = 178 nM | NHP | C10 H16 N O3 P S | c1ccc(c(c1.... |
38 | 2CLO | - | PLS | C11 H17 N2 O8 P | Cc1c(c(c(c.... |
39 | 1WBJ | Kd = 0.31 mM | G3P | C3 H9 O6 P | C([C@H](CO.... |
40 | 1K3U | - | IAD | C14 H14 N2 O5 | c1ccc2c(c1.... |
41 | 2CLF | Kd = 280 uM | F6F | C10 H11 F3 N O6 P | c1cc(ccc1C.... |
42 | 4HN4 | - | F9F | C9 H11 F3 N O7 P S | c1cc(ccc1O.... |
43 | 1UBS | - | SER PLP | n/a | n/a |
44 | 1K7F | - | IAV | C15 H18 N2 O3 | CC(C)[C@@H.... |
45 | 2TSY | - | PLS | C11 H17 N2 O8 P | Cc1c(c(c(c.... |
46 | 4HPJ | - | 1D0 | C17 H20 N3 O8 P | Cc1c(c(c(c.... |
47 | 1C9D | ic50 = 499 nM | HF1 | C10 H12 F O4 P S | c1cc(c(cc1.... |
48 | 4WX2 | - | F6F | C10 H11 F3 N O6 P | c1cc(ccc1C.... |
49 | 6AM8 | - | TRP | C11 H12 N2 O2 | c1ccc2c(c1.... |
50 | 6CUZ | - | FEV | C13 H17 N2 O7 P | CC/C=C(C(=.... |
51 | 5TCJ | - | P1T | C11 H15 N2 O7 P | Cc1c(c(c(c.... |
52 | 5TCI | Kd = 132 nM | 79V | C17 H15 F N2 O | c1ccc(c(c1.... |
53 | 5TCH | - | MLI | C3 H2 O4 | C(C(=O)[O-.... |
54 | 6USA | - | PZJ | C14 H19 Cl N2 O3 S | c1ccc(c(c1.... |
55 | 6U6C | - | P1T | C11 H15 N2 O7 P | Cc1c(c(c(c.... |
56 | 5TCG | - | P1T | C11 H15 N2 O7 P | Cc1c(c(c(c.... |
No: | Ligand | ECFP6 Tc | MDL keys Tc |
---|---|---|---|
1 | FOO | 1 | 1 |
2 | AN7 | 0.75 | 0.886792 |
3 | PFM | 0.619718 | 0.877193 |
4 | PLP | 0.59322 | 0.849057 |
5 | 0JO | 0.588235 | 0.877193 |
6 | PZP | 0.583333 | 0.886792 |
7 | 4LM | 0.565217 | 0.892857 |
8 | FEV | 0.549296 | 0.877193 |
9 | EVM | 0.541667 | 0.830508 |
10 | F0G | 0.535211 | 0.907407 |
11 | KOU | 0.527778 | 0.844828 |
12 | MPM | 0.513889 | 0.824561 |
13 | PUS | 0.5 | 0.746269 |
14 | EPC | 0.5 | 0.87037 |
15 | PL6 | 0.5 | 0.859649 |
16 | FEJ | 0.493506 | 0.859649 |
17 | Z98 | 0.493506 | 0.85 |
18 | EXT | 0.492958 | 0.810345 |
19 | 5DK | 0.481928 | 0.793651 |
20 | EQJ | 0.481928 | 0.793651 |
21 | P70 | 0.481481 | 0.875 |
22 | PLR | 0.467742 | 0.796296 |
23 | PL5 | 0.463415 | 0.87931 |
24 | 6DF | 0.461538 | 0.821429 |
25 | PXP | 0.461538 | 0.741379 |
26 | HCP | 0.460526 | 0.783333 |
27 | P3D | 0.460526 | 0.746032 |
28 | PMP | 0.454545 | 0.75 |
29 | P89 | 0.452381 | 0.727273 |
30 | P1T | 0.434211 | 0.78125 |
31 | GLY PLP | 0.434211 | 0.789474 |
32 | P0P | 0.432836 | 0.814815 |
33 | PLG | 0.432432 | 0.790323 |
34 | L7N | 0.432099 | 0.684932 |
35 | CKT | 0.428571 | 0.803279 |
36 | GT1 | 0.426471 | 0.716667 |
37 | Q0P | 0.422222 | 0.833333 |
38 | 9TD | 0.421053 | 0.761194 |
39 | PLP ABU | 0.419753 | 0.75 |
40 | PPG | 0.418605 | 0.809524 |
41 | PDD | 0.415584 | 0.803279 |
42 | PDA | 0.415584 | 0.803279 |
43 | PP3 | 0.415584 | 0.803279 |
44 | LUK | 0.413793 | 0.724638 |
45 | LUH | 0.413793 | 0.724638 |
46 | PLT | 0.413043 | 0.833333 |
47 | SER PLP | 0.4125 | 0.793103 |
48 | IK2 | 0.410256 | 0.727273 |
49 | HEY | 0.409639 | 0.769231 |
50 | O1G | 0.409091 | 0.790323 |
51 | PLP ALO | 0.407407 | 0.807018 |
52 | 5PA | 0.405063 | 0.753846 |
53 | PLS | 0.405063 | 0.790323 |
54 | 2BO | 0.405063 | 0.803279 |
55 | 2BK | 0.405063 | 0.803279 |
56 | TLP | 0.405063 | 0.803279 |
57 | 3LM | 0.404762 | 0.746269 |
58 | PLP 999 | 0.402439 | 0.807018 |
59 | PPD | 0.4 | 0.790323 |
60 | C6P | 0.4 | 0.790323 |
No: | Ligand | Similarity coefficient |
---|---|---|
1 | PLP SER | 0.9602 |
2 | OJQ | 0.9325 |
3 | PLI | 0.9312 |
4 | IN5 | 0.9235 |
5 | LCS | 0.9228 |
6 | DCS | 0.9225 |
7 | PLP GLY | 0.9209 |
8 | PMH | 0.9157 |
9 | PLP AOA | 0.9137 |
10 | PLP 2TL | 0.8949 |
11 | AKB PLP | 0.8946 |
12 | PLP CYS | 0.8940 |
13 | 7TS | 0.8920 |
14 | 07U | 0.8802 |
15 | 74U | 0.8750 |
16 | IRG | 0.8714 |
17 | 7XF | 0.8710 |
18 | PY5 | 0.8707 |
19 | 96X | 0.8620 |
This union binding pocket(no: 1) in the query (biounit: 1cx9.bio1) has 74 residues | |||
---|---|---|---|
No: | Leader PDB | Ligand | Sequence Similarity |
This union binding pocket(no: 2) in the query (biounit: 1cx9.bio1) has 74 residues | |||
---|---|---|---|
No: | Leader PDB | Ligand | Sequence Similarity |