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Receptor
PDB id Resolution Class Description Source Keywords
2J9C 1.3 Å NON-ENZYME: OTHER STRUCTURE OF GLNK1 WITH BOUND EFFECTORS INDICATES REGULATORY MECHANISM FOR AMMONIA UPTAKE METHANOCOCCUS JANNASCHII EM SINGLE PARTICLE NITROGEN METABOLISM SIGNALLING TRANSCRIPTION MEMBRANE TRANSPORT HYPOTHETICAL PROTEIN TRANSCRIPTION REGULATION
Ref.: STRUCTURE OF GLNK1 WITH BOUND EFFECTORS INDICATES REGULATORY MECHANISM FOR AMMONIA UPTAKE. EMBO J. V. 26 589 2007
Ligand
Ligand Chain:Residue Validity Ligand Warnings Binding Data NGL Viewer Molecular Weight (Da) Formula SMILES
ACT A:1121;
A:1122;
C:1120;
Invalid;
Invalid;
Invalid;
none;
none;
none;
submit data
59.044 C2 H3 O2 CC(=O...
ATP C:1116;
A:1116;
B:1116;
Valid;
Valid;
Valid;
none;
none;
none;
submit data
507.181 C10 H16 N5 O13 P3 c1nc(...
MG A:1117;
B:1117;
C:1117;
Invalid;
Invalid;
Invalid;
none;
none;
none;
submit data
24.305 Mg [Mg+2...
CL A:1118;
A:1119;
B:1118;
C:1118;
Invalid;
Invalid;
Invalid;
Invalid;
none;
none;
none;
none;
submit data
35.453 Cl [Cl-]
EDO A:1120;
B:1119;
B:1120;
C:1119;
Invalid;
Invalid;
Invalid;
Invalid;
none;
none;
none;
none;
submit data
62.068 C2 H6 O2 C(CO)...
View in 3D viewer
90% Homology Family
Leader
PDB id Resolution Class Description Source Keywords
2J9C 1.3 Å NON-ENZYME: OTHER STRUCTURE OF GLNK1 WITH BOUND EFFECTORS INDICATES REGULATORY MECHANISM FOR AMMONIA UPTAKE METHANOCOCCUS JANNASCHII EM SINGLE PARTICLE NITROGEN METABOLISM SIGNALLING TRANSCRIPTION MEMBRANE TRANSPORT HYPOTHETICAL PROTEIN TRANSCRIPTION REGULATION
Ref.: STRUCTURE OF GLNK1 WITH BOUND EFFECTORS INDICATES REGULATORY MECHANISM FOR AMMONIA UPTAKE. EMBO J. V. 26 589 2007
Members (2)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 1443 families.
1 2J9C - ATP C10 H16 N5 O13 P3 c1nc(c2c(n....
2 2J9E - AKG C5 H6 O5 C(CC(=O)O)....
70% Homology Family (19)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 1205 families.
1 4CO0 Kd = 20 uM ADP C10 H15 N5 O10 P2 c1nc(c2c(n....
2 4CO4 Kd = 2 uM ATP C10 H16 N5 O13 P3 c1nc(c2c(n....
3 4CO3 Kd = 2 uM ATP C10 H16 N5 O13 P3 c1nc(c2c(n....
4 3MHY - ATP C10 H16 N5 O13 P3 c1nc(c2c(n....
5 4CO2 Kd = 20 uM ADP C10 H15 N5 O10 P2 c1nc(c2c(n....
6 4CO1 Kd = 20 uM ADP C10 H15 N5 O10 P2 c1nc(c2c(n....
7 4CNZ Kd = 20 uM ADP C10 H15 N5 O10 P2 c1nc(c2c(n....
8 3TA0 - ATP C10 H16 N5 O13 P3 c1nc(c2c(n....
9 3TA2 - ATP C10 H16 N5 O13 P3 c1nc(c2c(n....
10 2GNK - ATP C10 H16 N5 O13 P3 c1nc(c2c(n....
11 3LF0 Kd = 1.93 uM ATP C10 H16 N5 O13 P3 c1nc(c2c(n....
12 3NCQ - ATP C10 H16 N5 O13 P3 c1nc(c2c(n....
13 2J9C - ATP C10 H16 N5 O13 P3 c1nc(c2c(n....
14 2J9E - AKG C5 H6 O5 C(CC(=O)O)....
15 5L9N - ATP C10 H16 N5 O13 P3 c1nc(c2c(n....
16 2XBP Kd = 9.6 uM ATP C10 H16 N5 O13 P3 c1nc(c2c(n....
17 2XZW - ATP C10 H16 N5 O13 P3 c1nc(c2c(n....
18 4AFF - FLC C6 H5 O7 C(C(=O)[O-....
19 2XUL - ATP C10 H16 N5 O13 P3 c1nc(c2c(n....
50% Homology Family (28)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 1039 families.
1 4CO0 Kd = 20 uM ADP C10 H15 N5 O10 P2 c1nc(c2c(n....
2 4CO4 Kd = 2 uM ATP C10 H16 N5 O13 P3 c1nc(c2c(n....
3 4CO3 Kd = 2 uM ATP C10 H16 N5 O13 P3 c1nc(c2c(n....
4 3MHY - ATP C10 H16 N5 O13 P3 c1nc(c2c(n....
5 4CO2 Kd = 20 uM ADP C10 H15 N5 O10 P2 c1nc(c2c(n....
6 4CO1 Kd = 20 uM ADP C10 H15 N5 O10 P2 c1nc(c2c(n....
7 4CNZ Kd = 20 uM ADP C10 H15 N5 O10 P2 c1nc(c2c(n....
8 2O66 - FLC C6 H5 O7 C(C(=O)[O-....
9 2O67 - MLI C3 H2 O4 C(C(=O)[O-....
10 3TA1 - ADP C10 H15 N5 O10 P2 c1nc(c2c(n....
11 3TA0 - ATP C10 H16 N5 O13 P3 c1nc(c2c(n....
12 3TA2 - ATP C10 H16 N5 O13 P3 c1nc(c2c(n....
13 2GNK - ATP C10 H16 N5 O13 P3 c1nc(c2c(n....
14 3LF0 Kd = 1.93 uM ATP C10 H16 N5 O13 P3 c1nc(c2c(n....
15 3NCR - ADP MG n/a n/a
16 3NCQ - ATP C10 H16 N5 O13 P3 c1nc(c2c(n....
17 4OZL - AMP C10 H14 N5 O7 P c1nc(c2c(n....
18 4OZJ - ADP C10 H15 N5 O10 P2 c1nc(c2c(n....
19 2J9C - ATP C10 H16 N5 O13 P3 c1nc(c2c(n....
20 2J9E - AKG C5 H6 O5 C(CC(=O)O)....
21 4USI ic50 = 1.18 mM AKG C5 H6 O5 C(CC(=O)O)....
22 5L9N - ATP C10 H16 N5 O13 P3 c1nc(c2c(n....
23 1V3S - ATP C10 H16 N5 O13 P3 c1nc(c2c(n....
24 1V9O - ADP C10 H15 N5 O10 P2 c1nc(c2c(n....
25 2XBP Kd = 9.6 uM ATP C10 H16 N5 O13 P3 c1nc(c2c(n....
26 2XZW - ATP C10 H16 N5 O13 P3 c1nc(c2c(n....
27 4AFF - FLC C6 H5 O7 C(C(=O)[O-....
28 2XUL - ATP C10 H16 N5 O13 P3 c1nc(c2c(n....
Polypharmacology
Similar Ligands
Ligand no: 1; Ligand: ATP; Similar ligands found: 422
No: Ligand ECFP6 Tc MDL keys Tc
1 HEJ 1 1
2 ATP 1 1
3 5FA 0.985507 1
4 AQP 0.985507 1
5 AP5 0.927536 0.971831
6 B4P 0.927536 0.971831
7 BA3 0.913043 0.971831
8 ADP 0.9 1
9 A2D 0.884058 0.971831
10 AGS 0.84 0.945946
11 SAP 0.84 0.945946
12 6YZ 0.833333 0.972222
13 AT4 0.810811 0.958904
14 AN2 0.810811 0.985915
15 25L 0.809524 0.985915
16 AR6 0.802632 0.971831
17 APR 0.802632 0.971831
18 M33 0.8 0.958333
19 ACQ 0.794872 0.972222
20 TAT 0.794872 0.958904
21 T99 0.794872 0.958904
22 AD9 0.792208 0.972222
23 ACP 0.789474 0.972222
24 AMP 0.788732 0.971429
25 A 0.788732 0.971429
26 ANP 0.772152 0.972222
27 CA0 0.753247 0.945205
28 ADX 0.753247 0.873418
29 A22 0.746988 0.985915
30 50T 0.74359 0.958333
31 PRX 0.734177 0.893333
32 APC 0.734177 0.958904
33 ABM 0.733333 0.917808
34 ATF 0.731707 0.958904
35 ITT 0.730769 0.943662
36 7D4 0.730769 0.905405
37 ADQ 0.729412 0.945205
38 A3R 0.729412 0.907895
39 AP2 0.714286 0.958904
40 A12 0.714286 0.958904
41 A1R 0.709302 0.907895
42 SRA 0.706667 0.918919
43 5AL 0.698795 0.931507
44 HFD 0.695122 0.945946
45 9X8 0.693182 0.92
46 OAD 0.693182 0.945205
47 AU1 0.6875 0.972222
48 SRP 0.682353 0.906667
49 G5P 0.680851 0.921053
50 25A 0.678161 0.971831
51 3OD 0.677778 0.945205
52 4AD 0.670455 0.92
53 G3A 0.670213 0.921053
54 00A 0.662921 0.883117
55 RBY 0.662651 0.932432
56 ADP PO3 0.662651 0.943662
57 ADV 0.662651 0.932432
58 BIS 0.659341 0.933333
59 8QN 0.659091 0.931507
60 5SV 0.659091 0.848101
61 OOB 0.659091 0.931507
62 GTA 0.65625 0.886076
63 UP5 0.653061 0.92
64 AMO 0.651685 0.932432
65 PAJ 0.651685 0.884615
66 2A5 0.650602 0.918919
67 MAP 0.647727 0.945946
68 3AT 0.647059 0.971831
69 AHX 0.644444 0.896104
70 DLL 0.644444 0.931507
71 ATR 0.642857 0.971429
72 PAP 0.642857 0.985714
73 PTJ 0.641304 0.896104
74 7D3 0.6375 0.905405
75 3UK 0.637363 0.918919
76 SON 0.634146 0.932432
77 A4P 0.633663 0.843373
78 ALF ADP 0.632184 0.87013
79 ADP ALF 0.632184 0.87013
80 PR8 0.630435 0.85
81 WAQ 0.630435 0.883117
82 LAD 0.630435 0.860759
83 B5V 0.630435 0.906667
84 AFH 0.628866 0.884615
85 LMS 0.628205 0.82716
86 GAP 0.627907 0.893333
87 DTP 0.627907 0.905405
88 VO4 ADP 0.625 0.931507
89 ADP VO4 0.625 0.931507
90 TXA 0.623656 0.932432
91 ME8 0.623656 0.839506
92 1ZZ 0.623656 0.839506
93 NB8 0.623656 0.896104
94 FYA 0.623656 0.905405
95 DQV 0.622449 0.958333
96 T5A 0.621359 0.841463
97 ADN 0.619718 0.84507
98 RAB 0.619718 0.84507
99 XYA 0.619718 0.84507
100 DAL AMP 0.611111 0.905405
101 9SN 0.610526 0.871795
102 48N 0.61 0.896104
103 AP0 0.607843 0.896104
104 9ZD 0.604396 0.907895
105 9ZA 0.604396 0.907895
106 FA5 0.604167 0.906667
107 B5M 0.604167 0.894737
108 YAP 0.604167 0.894737
109 B5Y 0.604167 0.894737
110 NAI 0.60396 0.907895
111 6V0 0.60396 0.896104
112 TXD 0.60396 0.907895
113 DND 0.60396 0.932432
114 NXX 0.60396 0.932432
115 NAX 0.60396 0.873418
116 ADP BMA 0.602151 0.918919
117 A2R 0.6 0.985915
118 OMR 0.598039 0.851852
119 TXE 0.598039 0.907895
120 XAH 0.597938 0.839506
121 7DT 0.593023 0.985714
122 AOC 0.592593 0.821918
123 4UV 0.591837 0.894737
124 DDS 0.590909 0.878378
125 139 0.590476 0.873418
126 CNA 0.584906 0.932432
127 6AD 0.58427 0.909091
128 5AS 0.583333 0.77907
129 5N5 0.581081 0.819444
130 GA7 0.58 0.906667
131 4UU 0.58 0.894737
132 4TC 0.576923 0.896104
133 ADJ 0.575472 0.851852
134 5CD 0.573333 0.805556
135 A4D 0.573333 0.819444
136 RGT 0.571429 0.958904
137 A3P 0.571429 0.971429
138 7D5 0.56962 0.878378
139 LAQ 0.568627 0.839506
140 F2R 0.564815 0.864198
141 80F 0.563636 0.841463
142 YLP 0.563107 0.819277
143 A A 0.5625 0.944444
144 UPA 0.561905 0.907895
145 AV2 0.56044 0.917808
146 COD 0.559633 0.811765
147 4UW 0.557692 0.860759
148 JB6 0.556701 0.883117
149 3AM 0.555556 0.929577
150 ATP A A A 0.555556 0.930556
151 A2P 0.552941 0.957143
152 TYM 0.552381 0.906667
153 NA7 0.552083 0.958904
154 EP4 0.551282 0.753247
155 MYR AMP 0.55102 0.817073
156 PPS 0.549451 0.873418
157 YLC 0.54717 0.839506
158 YLB 0.54717 0.819277
159 NAD 0.545455 0.931507
160 DAT 0.545455 0.905405
161 TYR AMP 0.544554 0.87013
162 G5A 0.544444 0.77907
163 M2T 0.544304 0.734177
164 DTA 0.544304 0.786667
165 3DH 0.54321 0.773333
166 128 0.542857 0.776471
167 AHZ 0.538462 0.817073
168 GTP 0.537634 0.92
169 SSA 0.537634 0.8
170 MTA 0.5375 0.773333
171 IOT 0.537037 0.831325
172 A3D 0.535714 0.918919
173 ARG AMP 0.533981 0.829268
174 7MD 0.533981 0.8625
175 AR6 AR6 0.533981 0.917808
176 YLA 0.53211 0.819277
177 AMP DBH 0.529412 0.893333
178 IMO 0.529412 0.929577
179 TAD 0.528846 0.884615
180 AYB 0.527273 0.809524
181 A5A 0.526882 0.807229
182 HDV 0.526882 0.893333
183 TSB 0.526316 0.819277
184 EAD 0.525424 0.873418
185 2AM 0.52439 0.943662
186 6RE 0.52381 0.759494
187 7DD 0.522727 0.985714
188 V3L 0.521739 0.971831
189 AVV 0.520833 0.896104
190 BTX 0.517857 0.841463
191 NAE 0.517241 0.894737
192 52H 0.515789 0.77907
193 54H 0.515789 0.788235
194 VMS 0.515789 0.788235
195 NSS 0.515464 0.8
196 BT5 0.513274 0.831325
197 NAQ 0.512821 0.871795
198 ZAS 0.511905 0.766234
199 J7C 0.511628 0.769231
200 A3N 0.511628 0.786667
201 5X8 0.511111 0.763158
202 53H 0.510417 0.77907
203 8X1 0.510417 0.752809
204 5CA 0.510417 0.8
205 NVA LMS 0.510204 0.752809
206 ARU 0.510204 0.860759
207 AF3 ADP 3PG 0.509259 0.8375
208 ZID 0.508475 0.918919
209 P1H 0.508197 0.851852
210 OVE 0.505882 0.905405
211 S4M 0.505747 0.666667
212 LEU LMS 0.50505 0.752809
213 LPA AMP 0.504673 0.817073
214 7MC 0.504587 0.841463
215 DZD 0.5 0.884615
216 FB0 0.5 0.804598
217 MAO 0.5 0.759036
218 DSZ 0.5 0.8
219 LSS 0.5 0.761364
220 DSH 0.5 0.725
221 P5A 0.5 0.744444
222 NDE 0.495935 0.932432
223 N0B 0.495798 0.819277
224 M24 0.495726 0.85
225 YLY 0.495726 0.809524
226 NJP 0.495575 0.945946
227 9K8 0.49505 0.714286
228 MGP 0.494737 0.884615
229 6C6 0.494624 0.881579
230 NAJ PZO 0.491379 0.848101
231 0WD 0.491228 0.921053
232 6G0 0.489583 0.884615
233 GJV 0.488636 0.75
234 6FA 0.488189 0.841463
235 5AD 0.486842 0.746479
236 KAA 0.485149 0.752809
237 GSU 0.485149 0.77907
238 71V 0.483146 0.907895
239 NEC 0.482759 0.746667
240 A3G 0.482759 0.8
241 ODP 0.482456 0.909091
242 FAS 0.48062 0.851852
243 FAD 0.48062 0.851852
244 7D7 0.480519 0.743243
245 FDA 0.480315 0.833333
246 N6P 0.48 0.915493
247 2SA 0.479167 0.932432
248 GP3 0.478723 0.921053
249 4TA 0.478261 0.807229
250 SFG 0.478261 0.75
251 G A A A 0.478261 0.871795
252 AMP NAD 0.478261 0.905405
253 NPW 0.477876 0.886076
254 NDP 0.477876 0.921053
255 NDC 0.47619 0.871795
256 YSA 0.47619 0.77907
257 NAJ PYZ 0.475 0.807229
258 MGO 0.474227 0.860759
259 GDP 0.473684 0.92
260 NZQ 0.473684 0.909091
261 TXP 0.473684 0.921053
262 6IA 0.473684 0.8375
263 A7D 0.472527 0.776316
264 SFD 0.469231 0.734043
265 A5D 0.468085 0.786667
266 SA8 0.468085 0.707317
267 ZDA 0.468085 0.864865
268 12D 0.46789 0.785714
269 PGS 0.467391 0.883117
270 MHZ 0.467391 0.697674
271 8PZ 0.466667 0.8
272 62F 0.466165 0.8625
273 DA 0.465909 0.878378
274 D5M 0.465909 0.878378
275 GGZ 0.464646 0.825
276 SAH 0.463158 0.74359
277 SAI 0.463158 0.734177
278 FAY 0.462687 0.8625
279 Y3J 0.4625 0.726027
280 PO4 PO4 A A A A PO4 0.460784 0.902778
281 AAM 0.460674 0.971429
282 RFL 0.459259 0.821429
283 SMM 0.459184 0.686047
284 HF7 0.459184 0.893333
285 AMZ 0.458824 0.916667
286 C2R 0.458824 0.90411
287 SAM 0.458333 0.690476
288 A3S 0.456522 0.810811
289 FNK 0.455224 0.804598
290 U A 0.453782 0.907895
291 7C5 0.453704 0.818182
292 EEM 0.453608 0.690476
293 AAT 0.453608 0.707317
294 XNP 0.452991 0.873418
295 A G 0.452991 0.883117
296 PRT 0.45283 0.931507
297 AIR 0.451219 0.901408
298 62X 0.45098 0.666667
299 DCA 0.45 0.823529
300 ETB 0.45 0.833333
301 GSP 0.45 0.873418
302 U A G G 0.449153 0.883117
303 NIA 0.448276 0.822785
304 A3T 0.446809 0.821918
305 A A A 0.446602 0.905405
306 K15 0.446602 0.682353
307 PUA 0.446281 0.884615
308 6K6 0.445545 0.930556
309 GEK 0.445545 0.7375
310 4YB 0.445455 0.761364
311 S7M 0.444444 0.690476
312 Z5A 0.443548 0.77907
313 1DG 0.443548 0.921053
314 DG1 0.443548 0.921053
315 0T1 0.442623 0.823529
316 COA 0.442623 0.823529
317 WSA 0.442478 0.788235
318 8BR 0.43956 0.906667
319 8Q2 0.438596 0.772727
320 101 0.438202 0.878378
321 IDP 0.4375 0.918919
322 NVA 2AD 0.4375 0.759494
323 9JJ 0.435714 0.8625
324 NAP 0.435484 0.945205
325 APU 0.434783 0.894737
326 A U 0.434783 0.87013
327 7RP 0.433333 0.928571
328 A6D 0.432692 0.722892
329 AMX 0.432 0.833333
330 J7V 0.432 0.833333
331 TAP 0.432 0.907895
332 COS 0.432 0.804598
333 CAO 0.432 0.795455
334 30N 0.432 0.752688
335 V1N 0.431193 0.917808
336 649 0.429825 0.744444
337 P5F 0.429577 0.823529
338 NA0 0.428571 0.932432
339 SCO 0.428571 0.823529
340 CMX 0.428571 0.823529
341 7RA 0.428571 0.957747
342 0UM 0.427184 0.698795
343 GAV 0.427184 0.884615
344 QQY 0.426966 0.815789
345 1RB 0.426966 0.885714
346 ACK 0.426966 0.861111
347 G1R 0.425743 0.907895
348 GCP 0.425743 0.896104
349 FAM 0.425197 0.804598
350 FCX 0.425197 0.795455
351 ACO 0.425197 0.795455
352 GNH 0.424242 0.907895
353 F2N 0.423611 0.813953
354 GKE 0.422018 0.884615
355 GDD 0.422018 0.884615
356 GDC 0.422018 0.884615
357 HAX 0.421875 0.804598
358 3AD 0.421687 0.805556
359 9GM 0.421569 0.896104
360 GNP 0.421569 0.896104
361 FA9 0.42069 0.864198
362 TM1 0.420561 0.77381
363 KB1 0.420561 0.698795
364 H6Y 0.42 0.945205
365 2MC 0.419847 0.769231
366 3KK 0.418605 0.804598
367 FYN 0.418605 0.823529
368 S8M 0.417476 0.759494
369 7L1 0.417323 0.795455
370 2VA 0.416667 0.8
371 26A 0.416667 0.763158
372 NHD 0.416667 0.905405
373 QQX 0.41573 0.805195
374 CA6 0.415385 0.729167
375 OXK 0.415385 0.804598
376 COK 0.415385 0.804598
377 SOP 0.415385 0.804598
378 MCD 0.415385 0.804598
379 YE1 0.413534 0.813953
380 RMB 0.413043 0.873239
381 FAI 0.413043 0.916667
382 AS 0.413043 0.833333
383 CO6 0.412214 0.804598
384 1VU 0.412214 0.795455
385 CMC 0.412214 0.804598
386 NMX 0.412214 0.76087
387 SXZ 0.411215 0.710843
388 ANZ 0.410714 0.8
389 SCA 0.410448 0.804598
390 CAJ 0.409091 0.804598
391 SCD 0.409091 0.823529
392 EO7 0.408602 0.788235
393 D3Y 0.407767 0.789474
394 CC5 0.407407 0.816901
395 KH3 0.40708 0.674419
396 A C A C 0.406504 0.848101
397 SLU 0.406504 0.770115
398 G 0.40625 0.906667
399 5GP 0.40625 0.906667
400 A1S 0.406015 0.804598
401 IVC 0.406015 0.813953
402 MLC 0.406015 0.804598
403 3HC 0.406015 0.813953
404 1HE 0.406015 0.786517
405 BCO 0.406015 0.804598
406 GTG 0.405405 0.886076
407 NMN AMP PO4 0.404959 0.87013
408 3D1 0.404762 0.773333
409 3L1 0.404762 0.773333
410 2BA 0.404255 0.915493
411 CMP 0.404255 0.901408
412 VRT 0.40404 0.769231
413 SO8 0.40404 0.789474
414 MCA 0.402985 0.795455
415 COO 0.402985 0.804598
416 CAA 0.402985 0.813953
417 3NZ 0.401869 0.782051
418 G2R 0.401869 0.884615
419 ZZB 0.4 0.77381
420 2FA 0.4 0.813333
421 MC4 0.4 0.76087
422 2CP 0.4 0.795455
Similar Binding Sites (Proteins are less than 50% similar to leader)
Pocket No.: 1; Query (leader) PDB : 2J9C; Ligand: ATP; Similar sites found with APoc: 130
This union binding pocket(no: 1) in the query (biounit: 2j9c.bio1) has 25 residues
No: Leader PDB Ligand Sequence Similarity
1 4B9E FAH None
2 1MFI FHC None
3 6C5F 7L9 None
4 3SAO DBH None
5 5WHT SIA GAL GLC None
6 3KIF GDL None
7 5WHT SIA GAL None
8 4RHS SIA SIA GAL None
9 1PVS 7HP None
10 4KRG OPE None
11 2GMM MAN MAN None
12 5JXZ ISJ None
13 5JY4 ISC None
14 5CLO NS8 None
15 2BKX F6R None
16 5JXZ ISC None
17 1C3X 8IG 1.68067
18 5FUI APY 2.52101
19 2QPU QPS 2.52101
20 2QPU QPU 2.52101
21 1QKQ MAN 2.52101
22 1GPJ CIT 2.52101
23 6FA4 D1W 2.52101
24 5AE2 FAD 2.52101
25 5AE2 FYC 2.52101
26 1WB4 SXX 2.52101
27 3EFS BTN 3.36134
28 5OCG 9R5 3.36134
29 3TW1 AHN 3.36134
30 3CBC DBS 3.36134
31 3VSV XYS 3.36134
32 5F7J ADE 4.20168
33 1ELI PYC 4.20168
34 5WL1 CUY 4.20168
35 5WL1 D3D 4.20168
36 3B6R ADP 4.20168
37 1K0E TRP 4.20168
38 5OKT 9XK 4.20168
39 4KBA 1QM 4.20168
40 4IEN GDP 4.20168
41 1TL2 NDG 4.20168
42 4EYG VNL 4.20168
43 2DC1 CIT 4.20168
44 4NS3 NAD 4.20168
45 2G50 ALA 4.20168
46 5KJW 53C 5.04202
47 5OFW 9TW 5.04202
48 5N53 8NB 5.04202
49 3MMH SME 5.04202
50 3NZ1 3NY 5.04202
51 4TVD BGC 5.04202
52 4L3L 5FI 5.04202
53 2CH5 NAG 5.04202
54 3KIH GDL 5.15464
55 1G51 AMP 5.88235
56 1GPM AMP 5.88235
57 2CJU PHX 5.88235
58 6E1Q CFA 5.88235
59 1T3D CYS 5.88235
60 1SDW IYT 5.88235
61 2OQ2 A3P 5.88235
62 1UA4 AMP 5.88235
63 5A7Y SAH 5.88235
64 4D52 GIV 5.88235
65 1UYY BGC BGC 6.72269
66 5Y4R C2E 6.72269
67 4FK7 P34 6.72269
68 3AI3 SOE 6.72269
69 1SBR VIB 6.72269
70 4CJN QNZ 6.72269
71 5LX9 OLB 6.72269
72 5TVA AMP 6.72269
73 3WV6 GAL BGC 6.72269
74 3LGS ADE 6.72269
75 5TE1 7A2 6.72269
76 5HWV MBN 6.72269
77 1FQK ALF 7.56302
78 4CQM NAP 7.56302
79 4WOE ADP 7.56302
80 2IYF UDP 7.56302
81 1FQJ ALF 7.56302
82 2WME NAP 7.56302
83 4RF7 ARG 7.56302
84 4MOB ADP 8.40336
85 2AWN ADP 8.40336
86 5CIC 51R 8.40336
87 2IU8 PLM 8.40336
88 2RI1 GLP 8.40336
89 2GK6 ADP 8.40336
90 1G6H ADP 8.40336
91 3IWJ NAD 8.40336
92 3IWD M2T 8.82353
93 1LSH PLD 9.2437
94 2VL1 GLY GLY 9.2437
95 6GNO XDI 9.2437
96 1W8S FBP 9.2437
97 4OE4 NAD 9.2437
98 1OFL NGK GCD 9.2437
99 3ZZL TRP 10
100 4URF 1PS 10.084
101 1VRP ADP 10.084
102 3ZJX BOG 10.084
103 5OUH L0B 10.084
104 1U6R ADP 10.084
105 2VGD XYP XYP 10.084
106 3NKS ACJ 10.084
107 3ZO7 K6H 10.6383
108 1RYD GLC 10.9244
109 2D24 XYS XYS 10.9244
110 1VCO GLN 10.9244
111 3H9R TAK 11.7647
112 2E27 AB0 11.7647
113 3JQ3 ADP 12.605
114 3THR C2F 12.605
115 1VBO MAN 13.4454
116 4FXQ G9L 13.4454
117 5O0J 8BR 15.126
118 2PNC CLU 15.9664
119 5UC9 MYR 15.9664
120 1F9V ADP 16.8067
121 1M0S CIT 17.6471
122 5XLY C2E 17.6471
123 4TO8 FLC 18.4874
124 1LK7 DER 19.3277
125 2Z3U CRR 22.6891
126 4HE2 AMP 23.5294
127 2ZXI FAD 23.5294
128 4TQK NAG 26.8908
129 5J60 FAD 29.4118
130 5KBF CMP 31.0924
Pocket No.: 2; Query (leader) PDB : 2J9C; Ligand: ATP; Similar sites found with APoc: 30
This union binding pocket(no: 2) in the query (biounit: 2j9c.bio1) has 26 residues
No: Leader PDB Ligand Sequence Similarity
1 1XZ3 ICF None
2 1MID LAP None
3 1HBK MYR None
4 4EZW ASN ARG LEU LEU LEU THR GLY 1.68067
5 2HZL PYR 2.52101
6 5N0O SAM 4.20168
7 5LX6 78P 5.04202
8 1Q19 SSC 5.04202
9 2ZV2 609 5.04202
10 5G48 1FL 5.88235
11 3VKX T3 5.88235
12 1SJD NPG 5.88235
13 4L9I 8PR 5.88235
14 1O94 AMP 6.72269
15 4YRI 4JH 7.56302
16 1XVB BHL 7.56302
17 5FPE 3TR 8.40336
18 5FUS DAO 8.40336
19 4KVL PLM 9.2437
20 3QSB 743 9.2437
21 5GLT BGC GAL NAG GAL 9.2437
22 2IVD ACJ 9.2437
23 3A06 FOM 10.084
24 1APZ ASP 11.7647
25 1JJE BYS 15.126
26 2VAR AMP 15.9664
27 4O08 PO6 16.8067
28 2AGC DAO 19.3277
29 2HJ4 PNZ 24.3697
30 4IP7 FLC 28.5714
Pocket No.: 3; Query (leader) PDB : 2J9C; Ligand: ATP; Similar sites found with APoc: 39
This union binding pocket(no: 3) in the query (biounit: 2j9c.bio1) has 27 residues
No: Leader PDB Ligand Sequence Similarity
1 1IS3 LAT None
2 2GND MAN None
3 1C1L GAL BGC None
4 2GN3 MMA None
5 5GVR LMR 1.68067
6 4WVH ASP HIS ASP ALA HIS ALA 4.20168
7 5NFB 8VT 5.04202
8 1OFS SUC 5.04202
9 1RRC ADP 5.04202
10 3QPB URA 5.04202
11 4D52 GXL 5.88235
12 3IUY AMP 5.88235
13 2WHX ADP 5.88235
14 2BO4 FLC 5.88235
15 2WPB ZZI 5.88235
16 5TV6 PML 6.72269
17 5TVA COA 6.72269
18 2W5P CL8 6.72269
19 4U00 ADP 7.56302
20 6GH9 MIX 7.56302
21 1INN MET 7.56302
22 4YRY FAD 8.40336
23 2XT3 ADP 9.2437
24 3A2Q ACA ACA 9.2437
25 2YFO GLA 9.2437
26 2YFO GAL 9.2437
27 2XN2 GLA 10.084
28 2W58 ADP 10.084
29 1GOJ ADP 10.9244
30 5Y4K AKR 12.605
31 1BXG HCI 12.605
32 2AIQ BEN 12.605
33 1VBO MAN MAN MAN 13.4454
34 1I7M CG 14.2857
35 1IZC PYR 15.126
36 4QM7 GTP 16.8067
37 2Y65 ADP 16.8067
38 2AEL SAZ 21.8487
39 4AF5 CIT 27.7311
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