Receptor
PDB id Resolution Class Description Source Keywords
2J1T 1.6 Å NON-ENZYME: BINDING STRUCTURE OF A STREPTOCOCCUS PNEUMONIAE FUCOSE BINDING MODUL COMPLEX WITH THE LEWIS Y ANTIGEN STREPTOCOCCUS PNEUMONIAE CARBOHYDRATE-BINDING PROTEIN CARBOHYDRATE BINDING PROTEIN
Ref.: BLOOD GROUP ANTIGEN RECOGNITION BY A STREPTOCOCCUS PNEUMONIAE VIRULENCE FACTOR J.BIOL.CHEM. V. 281 35263 2006
Ligand
Ligand Chain:Residue Validity Ligand Warnings Binding Data NGL Viewer Molecular Weight (Da) Formula SMILES
CA A:1154;
B:1152;
 Part of Protein;
Part of Protein;
 none;
none;
 submit data
40.078 Ca [Ca+2...
NAG FUC GAL FUC C:1;
 Valid;
 none;
 Ka = 1000 M^-1
n/a n/a
View in 3D viewer
90% Homology Family
Leader
PDB id Resolution Class Description Source Keywords
2J1T 1.6 Å NON-ENZYME: BINDING STRUCTURE OF A STREPTOCOCCUS PNEUMONIAE FUCOSE BINDING MODUL COMPLEX WITH THE LEWIS Y ANTIGEN STREPTOCOCCUS PNEUMONIAE CARBOHYDRATE-BINDING PROTEIN CARBOHYDRATE BINDING PROTEIN
Ref.: BLOOD GROUP ANTIGEN RECOGNITION BY A STREPTOCOCCUS PNEUMONIAE VIRULENCE FACTOR J.BIOL.CHEM. V. 281 35263 2006
Members (4)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 552 families.
1 2J1U - BGC GAL FUC A2G n/a n/a
2 2J1V - NAG GAL FUC n/a n/a
3 2J1S - FUL C6 H12 O5 C[C@H]1[C@....
4 2J1T Ka = 1000 M^-1 NAG FUC GAL FUC n/a n/a
70% Homology Family (4)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 426 families.
1 2J1U - BGC GAL FUC A2G n/a n/a
2 2J1V - NAG GAL FUC n/a n/a
3 2J1S - FUL C6 H12 O5 C[C@H]1[C@....
4 2J1T Ka = 1000 M^-1 NAG FUC GAL FUC n/a n/a
50% Homology Family (7)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 322 families.
1 2J1U - BGC GAL FUC A2G n/a n/a
2 2J1V - NAG GAL FUC n/a n/a
3 2J1S - FUL C6 H12 O5 C[C@H]1[C@....
4 2J1T Ka = 1000 M^-1 NAG FUC GAL FUC n/a n/a
5 3LEK - NDG GAL FUC FUC n/a n/a
6 3LEG - NAG FUC GAL FUC n/a n/a
7 3LEI - FUC C6 H12 O5 C[C@H]1[C@....
Polypharmacology
Similar Ligands (2D)
Ligand no: 1; Ligand: NAG FUC GAL FUC; Similar ligands found: 0
No: Ligand ECFP6 Tc MDL keys Tc
Similar Ligands (3D)
Ligand no: 1; Ligand: NAG FUC GAL FUC; Similar ligands found: 6
No: Ligand Similarity coefficient
1 NAG FUC GAL FUC 1.0000
2 MAG FUC GAL FUC 0.9702
3 NDG FUC GAL FUC 0.9659
4 NDG GAL FUC FUC 0.9593
5 NAG GAL FUC FUC 0.9560
6 MAG GAL FUC FUC 0.8963
Similar Binding Sites (Proteins are less than 50% similar to leader) APoc FAQ
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