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Receptor
PDB id Resolution Class Description Source Keywords
2J0V 1.78 Å NON-ENZYME: BINDING THE CRYSTAL STRUCTURE OF ARABIDOPSIS THALIANA RAC7-ROP9: THE FIRST RAS SUPERFAMILY GTPASE FROM THE PLANT KINGDOM ARABIDOPSIS THALIANA NUCLEOTIDE-BINDING PROTEIN ROP9 ATRAC7 MEMBRANE PALMITATE RHO GTPASE ABSCISIC ACID SIGNALING PATHWAY DNA BINDING PROTEIN NUCLEOTIDE- BINDING ARABIDOPSIS THALIANA LIPOPROTEIN GTP-BINDING RAS SUPERFAMILY
Ref.: THE CRYSTAL STRUCTURE OF ARABIDOPSIS THALIANA RAC7/ROP9: THE FIRST RAS SUPERFAMILY GTPASE FROM THE PLANT KINGDOM. PHYTOCHEMISTRY V. 67 2332 2006
Ligand
Ligand Chain:Residue Validity Ligand Warnings Binding Data NGL Viewer Molecular Weight (Da) Formula SMILES
GDP A:1179;
B:1182;
C:1178;
D:1180;
Valid;
Valid;
Valid;
Valid;
none;
none;
none;
none;
submit data
443.201 C10 H15 N5 O11 P2 c1nc2...
MG A:1180;
B:1183;
C:1179;
D:1181;
Part of Protein;
Part of Protein;
Part of Protein;
Part of Protein;
none;
none;
none;
none;
submit data
24.305 Mg [Mg+2...
View in 3D viewer
90% Homology Family
Leader
PDB id Resolution Class Description Source Keywords
2J0V 1.78 Å NON-ENZYME: BINDING THE CRYSTAL STRUCTURE OF ARABIDOPSIS THALIANA RAC7-ROP9: THE FIRST RAS SUPERFAMILY GTPASE FROM THE PLANT KINGDOM ARABIDOPSIS THALIANA NUCLEOTIDE-BINDING PROTEIN ROP9 ATRAC7 MEMBRANE PALMITATE RHO GTPASE ABSCISIC ACID SIGNALING PATHWAY DNA BINDING PROTEIN NUCLEOTIDE- BINDING ARABIDOPSIS THALIANA LIPOPROTEIN GTP-BINDING RAS SUPERFAMILY
Ref.: THE CRYSTAL STRUCTURE OF ARABIDOPSIS THALIANA RAC7/ROP9: THE FIRST RAS SUPERFAMILY GTPASE FROM THE PLANT KINGDOM. PHYTOCHEMISTRY V. 67 2332 2006
Members (1)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 510 families.
1 2J0V - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
70% Homology Family (1)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 391 families.
1 2J0V - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
50% Homology Family (3)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 174 families.
1 2W2T - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
2 3REF - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
3 2J0V - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
Polypharmacology
Similar Ligands
Ligand no: 1; Ligand: GDP; Similar ligands found: 161
No: Ligand ECFP6 Tc MDL keys Tc
1 GDP 1 1
2 GTP 0.909091 1
3 GP3 0.881579 0.973684
4 GNH 0.858974 0.986667
5 9GM 0.839506 0.973684
6 GNP 0.839506 0.973684
7 G 0.828947 0.986486
8 5GP 0.828947 0.986486
9 G1R 0.82716 0.986667
10 GCP 0.82716 0.973684
11 GSP 0.817073 0.948718
12 GAV 0.797619 0.961039
13 GMV 0.792683 0.973684
14 G2P 0.77381 0.961039
15 G2R 0.770115 0.961039
16 GP2 0.756098 0.961039
17 GDC 0.747253 0.961039
18 GKE 0.747253 0.961039
19 GDD 0.747253 0.961039
20 GPG 0.741573 0.961039
21 G3D 0.732558 0.986486
22 ALF 5GP 0.729412 0.888889
23 Y9Z 0.728261 0.902439
24 G5P 0.723404 0.973684
25 GFB 0.72043 0.961039
26 GTG 0.72043 0.936709
27 GDR 0.72043 0.961039
28 G4P 0.715909 0.986486
29 G3A 0.712766 0.973684
30 6CK 0.712766 0.936709
31 GDP AF3 0.7 0.888889
32 ALF GDP 0.7 0.888889
33 GDP ALF 0.7 0.888889
34 YGP 0.698925 0.901235
35 GKD 0.697917 0.961039
36 JB2 0.697917 0.961039
37 GDX 0.690722 0.973684
38 GPD 0.690722 0.925
39 GMP 0.684211 0.88
40 0O2 0.666667 0.986486
41 JB3 0.656863 0.948718
42 NGD 0.650485 0.961039
43 DGI 0.636364 0.923077
44 GDP 7MG 0.636364 0.911392
45 U2G 0.634615 0.936709
46 GPX 0.634409 0.946667
47 G G 0.632653 0.948052
48 IDP 0.632184 0.972973
49 2MD 0.632075 0.891566
50 CAG 0.62963 0.880952
51 CG2 0.622642 0.936709
52 FEG 0.619048 0.879518
53 MGD 0.614679 0.891566
54 ZGP 0.613208 0.869048
55 GH3 0.612903 0.973333
56 3GP 0.611765 0.946667
57 MD1 0.607143 0.891566
58 PGD 0.59292 0.925
59 DGT 0.591398 0.923077
60 BGO 0.588785 0.924051
61 TPG 0.582609 0.840909
62 DBG 0.582609 0.948718
63 2GP 0.574713 0.96
64 FE9 0.570175 0.776596
65 GCP G 0.56 0.921053
66 A G 0.553571 0.935065
67 G A A A 0.553571 0.923077
68 MGP 0.553191 0.961039
69 U A G G 0.548673 0.935065
70 G4M 0.548387 0.880952
71 6G0 0.547368 0.961039
72 G1R G1R 0.542373 0.924051
73 P2G 0.527473 0.883117
74 PGD O 0.525 0.850575
75 ADP 0.522222 0.92
76 R5I 0.520833 0.946667
77 R7I 0.520833 0.946667
78 GGM 0.517544 0.901235
79 DGP 0.516484 0.910256
80 DG 0.516484 0.910256
81 P1G 0.516129 0.871795
82 G U 0.513274 0.9
83 G1G 0.508475 0.925
84 IMP 0.505495 0.959459
85 AKW 0.504425 0.890244
86 G C 0.504348 0.9
87 GPC 0.491525 0.879518
88 G7M 0.483871 0.948052
89 6AD 0.479592 0.841463
90 ATP 0.473684 0.92
91 HEJ 0.473684 0.92
92 G2Q 0.471154 0.961039
93 5FA 0.46875 0.92
94 AQP 0.46875 0.92
95 GTA 0.468468 0.936709
96 7DD 0.468085 0.906667
97 G G G RPC 0.466102 0.875
98 SGP 0.463158 0.82716
99 01G 0.462963 0.902439
100 HFD 0.459184 0.873418
101 B4P 0.457447 0.894737
102 AP5 0.457447 0.894737
103 A2D 0.456522 0.894737
104 6YZ 0.455446 0.896104
105 G G G C 0.455285 0.9125
106 5GP 5GP 0.454545 0.883117
107 ANP 0.454545 0.896104
108 ACQ 0.454545 0.896104
109 AT4 0.452632 0.884615
110 A G C C 0.451613 0.911392
111 APC G U 0.45082 0.886076
112 PRT 0.449541 0.959459
113 G U34 0.449153 0.888889
114 DG DG 0.448598 0.865854
115 ITT 0.447917 0.868421
116 BA3 0.446809 0.894737
117 C2E 0.444444 0.921053
118 PCG 0.444444 0.933333
119 35G 0.444444 0.933333
120 MGO 0.441176 0.864198
121 AN2 0.4375 0.907895
122 G C C C 0.4375 0.924051
123 M33 0.43299 0.883117
124 UCG 0.429688 0.911392
125 A G U 0.42963 0.888889
126 ACP 0.428571 0.896104
127 MGQ 0.424528 0.935897
128 AR6 0.424242 0.894737
129 7DT 0.424242 0.906667
130 APR 0.424242 0.894737
131 93A 0.42268 0.833333
132 A4P 0.420168 0.869048
133 G8D 0.42 0.875
134 AD9 0.42 0.896104
135 SAP 0.42 0.873418
136 AGS 0.42 0.873418
137 CA0 0.418367 0.896104
138 ATF 0.417476 0.884615
139 AGO 0.414634 0.888889
140 A G U U 0.414286 0.888889
141 NIA 0.413043 0.82716
142 MGV 0.412844 0.890244
143 TAT 0.411765 0.884615
144 T99 0.411765 0.884615
145 ADQ 0.411215 0.871795
146 A1R 0.411215 0.839506
147 RGT 0.410714 0.909091
148 CGP 0.409836 0.86747
149 C1Z 0.409091 0.986486
150 A 0.408602 0.893333
151 AMP 0.408602 0.893333
152 UP5 0.40678 0.873418
153 AMZ 0.406593 0.918919
154 C2R 0.406593 0.906667
155 JBT 0.405882 0.778947
156 A22 0.40566 0.907895
157 25L 0.405405 0.907895
158 ADX 0.40404 0.809524
159 8OD 0.401961 0.946667
160 50T 0.4 0.883117
161 4TC 0.4 0.851852
Similar Binding Sites (Proteins are less than 50% similar to leader)
Pocket No.: 1; Query (leader) PDB : 2J0V; Ligand: GDP; Similar sites found with APoc: 591
This union binding pocket(no: 1) in the query (biounit: 2j0v.bio3) has 17 residues
No: Leader PDB Ligand Sequence Similarity
1 2GJ8 ALF GDP None
2 2WIC GNP None
3 4YDS ATP None
4 3W5J GDP None
5 3H86 AP5 None
6 1JJV ATP None
7 4JLV ADP None
8 4HUT ATP None
9 4KOT CE3 None
10 2XTN GTP 0.943396
11 3FKQ ATP 0.943396
12 4ZNL BEF ADP 0.943396
13 1WMA NDP 0.943396
14 1WMA AB3 0.943396
15 3TK1 GDP 1.41509
16 4Q1A 2XZ 1.41509
17 4Q1A UDP 1.41509
18 1UJ2 ADP 1.41509
19 1UJ2 C5P 1.41509
20 1ZIN AP5 1.41509
21 1AKY AP5 1.41509
22 3EWA ANP 1.41509
23 1YXM ADE 1.41509
24 4R2I ANP 1.42857
25 2WJG GDP 1.59574
26 2WJH GDP 1.80723
27 2WJH FLC 1.80723
28 3A1S GDP 1.88679
29 3MD0 GDP 1.88679
30 1S3G AP5 1.88679
31 4MKG AP5 1.88679
32 2PL3 ADP 1.88679
33 2ZE7 AMP 1.88679
34 2ZE7 DST 1.88679
35 1OYY AGS 1.88679
36 2O0J ADP 1.88679
37 4TMK T5A 1.88679
38 1BXG NAD 1.88679
39 2VAP GDP 1.88679
40 5M04 GDP 2.22222
41 4NON GDP 2.35849
42 5U32 GDP 2.35849
43 5H7J GCP 2.35849
44 2WOJ ADP ALF 2.35849
45 5WC2 ADP 2.35849
46 3ZS9 ADP ALF 2.35849
47 2ZFI ADP 2.35849
48 1K6M AGS 2.35849
49 1LVK MNT BEF 2.35849
50 4X8O AP5 2.35849
51 5TIV A3P 2.35849
52 3DKP ADP 2.35849
53 5BYK A3P 2.35849
54 5BYK OAQ 2.35849
55 1OE0 TTP 2.35849
56 3I7S PYR 2.35849
57 1M2Z BOG 2.35849
58 1X8J A3P 2.35849
59 2D2F ADP 2.35849
60 4JZ8 CIT 2.35849
61 5ZM4 AKG 2.35849
62 4QRH 0O2 2.38095
63 1Y63 ADP 2.71739
64 2QQ0 ANP 2.71739
65 2QQ0 THM 2.71739
66 2QQ0 ADP 2.71739
67 2QQ0 TMP 2.71739
68 3IIJ ADP 2.77778
69 3COB ADP 2.83019
70 1G7C 5GP 2.83019
71 3FWY ADP 2.83019
72 3T34 GDP 2.83019
73 3B5J 12D 2.83019
74 1GOJ ADP 2.83019
75 2CE7 ADP 2.83019
76 3P4X ADP 2.83019
77 3DC4 ADP 2.83019
78 4IHQ ADP 2.83019
79 3TMK T5A 2.83019
80 1OS1 ATP 2.83019
81 1OS1 PYR 2.83019
82 3FB4 AP5 2.83019
83 4PPF FLC 2.83019
84 1D2N ANP 2.83019
85 2WZF BGC 2.83019
86 2OBM ADP 2.83019
87 5LLB 6YZ 2.83019
88 4ITM ATP 2.83019
89 3MGB PAP 2.83019
90 1J2J GTP 3.01205
91 1O3Y GTP 3.01205
92 2J59 GTP 3.01205
93 1XX6 ADP 3.14136
94 6FMC DUE 3.16456
95 1TQ4 GDP 3.30189
96 4M9Q GNP 3.30189
97 2FH5 GTP 3.30189
98 4H1V GNP 3.30189
99 1V8K ANP 3.30189
100 2FNA ADP 3.30189
101 5AK0 8V1 3.30189
102 1BG2 ADP 3.30189
103 5EXT ADP 3.30189
104 2NCD ADP 3.30189
105 1T5C ADP 3.30189
106 2C9O ADP 3.30189
107 4BFW ZVW 3.30189
108 2ZR9 DTP 3.30189
109 1QF5 GDP 3.30189
110 1QF5 RPL 3.30189
111 4NU0 AP5 3.30189
112 2GK6 ADP 3.30189
113 1L2T ATP 3.30189
114 4YJ1 ADP 3.30189
115 5G41 AP5 3.30189
116 6DEF GCP 3.30189
117 4GBM A3P 3.30189
118 4LJ9 ACP 3.30189
119 1GPJ CIT 3.30189
120 2CZL TLA 3.30189
121 1LVG ADP 3.53535
122 1SVI GDP 3.58974
123 5MVR ADP 3.7037
124 3WY9 GDP 3.77358
125 3WYA GDP 3.77358
126 5W76 GDP 3.77358
127 4LC1 GDP 3.77358
128 5L3V GDP 3.77358
129 1IHU ADP 3.77358
130 1IHU AF3 3.77358
131 4LYA ATP 3.77358
132 1FP6 ADP 3.77358
133 3ZQ6 ADP ALF 3.77358
134 4NE2 SH2 3.77358
135 4NE2 ADP 3.77358
136 5FHD ADP ALF 3.77358
137 4IDN GNP 3.77358
138 1DAK DPU 3.77358
139 1DAK ADP 3.77358
140 1ION ADP 3.77358
141 1G6O ADP 3.77358
142 1G3Q ADP 3.77358
143 5UIV ADP 3.77358
144 5Z69 AGS 3.77358
145 3FYH ADP 3.77358
146 4WOP CTP 3.77358
147 2ZTS ADP 3.77358
148 2XAU ADP 3.77358
149 5FTB ANP 3.77358
150 5XDR ADP 3.77358
151 1U0J ADP 3.77358
152 2GDJ ANP 3.77358
153 1U1I NAD 3.77358
154 1KO8 6PG 4
155 3KTA AP5 4.04624
156 1XEX ATP 4.06977
157 1Z83 AP5 4.08163
158 1BO4 COA 4.16667
159 3U6B GDP 4.24528
160 4G5G GDP 4.24528
161 1D8T GDP 4.24528
162 3U6K GDP 4.24528
163 2BVN GNP 4.24528
164 5W7Q GDP 4.24528
165 1SKQ GDP 4.24528
166 3DEF GDP 4.24528
167 4R98 GNH 4.24528
168 1H65 GDP 4.24528
169 1F9V ADP 4.24528
170 5IRN ADP 4.24528
171 3KJI ADP 4.24528
172 1SQ5 ADP 4.24528
173 2QZ4 ADP 4.24528
174 4V03 ADP 4.24528
175 1NJF AGS 4.24528
176 5LTJ ADP 4.24528
177 3BOS CDP 4.24528
178 1R6B ADP 4.24528
179 3Q9L ATP 4.24528
180 1OXV ANP 4.24528
181 6B8B ADP 4.24528
182 3BFV ADP 4.24528
183 1JJ7 ADP 4.24528
184 1JI0 ATP 4.24528
185 4MKF AP5 4.24528
186 5LTJ BEF 4.24528
187 1NJF ADP 4.24528
188 4IEE AGS 4.24528
189 1Q20 A3P 4.24528
190 1Q20 PLO 4.24528
191 2B8T THM 4.24528
192 3BER AMP 4.24528
193 6AIC AMP 4.24528
194 2GWH A3P 4.24528
195 3SXN COA 4.24528
196 1UKZ ADP 4.4335
197 5ZB0 ADP 4.54545
198 5ZB0 TYD 4.54545
199 4BQS ADP 4.54545
200 4BQS K2Q 4.54545
201 2C78 GNP 4.71698
202 2C77 GNP 4.71698
203 3VX3 ADP 4.71698
204 4HSE ADP 4.71698
205 2OZE AGS 4.71698
206 4D81 ADP 4.71698
207 1IN4 ADP 4.71698
208 5ZBR ANP 4.71698
209 1XKV ATP 4.71698
210 3FVQ ATP 4.71698
211 2IXE ATP 4.71698
212 4TTQ ATP 4.71698
213 4XGU ADP 4.71698
214 1G6H ADP 4.71698
215 4YS0 ADP 4.71698
216 1NST A3P 4.71698
217 3BFX A3P 4.71698
218 2FSH ANP 4.71698
219 4J4V SVR 4.71698
220 1QHG ATP 4.71698
221 1QF9 C5P 5.15464
222 1QF9 ALF 5.15464
223 1QF9 ADP 5.15464
224 1KK1 GNP 5.18868
225 4ZKD GDP 5.18868
226 5L3W GDP 5.18868
227 3E70 GDP 5.18868
228 5L3S GNP 5.18868
229 5BN3 ADP 5.18868
230 6CS8 F9Y 5.18868
231 5GVR LMR 5.18868
232 3LRE ADP 5.18868
233 5M7P ADP 5.18868
234 1NN5 ANP 5.18868
235 1NN5 2DT 5.18868
236 5G3Y ADP 5.18868
237 2DPY ADP 5.18868
238 5YV5 ADP 5.18868
239 4FCW ADP 5.18868
240 4KBF AMP 5.18868
241 1H74 ADP 5.18868
242 2I4I AMP 5.18868
243 5TC4 NAD 5.18868
244 3RC3 ANP 5.18868
245 4QM7 GTP 5.26316
246 5KUT GDP 5.29101
247 1VHT BA3 5.50459
248 1F6B GDP 5.55556
249 1WF3 GNP 5.66038
250 4XTR ADP 5.66038
251 4XTR ATP 5.66038
252 4XVU ATP 5.66038
253 6B4K ANP 5.66038
254 4RZ3 ADP 5.66038
255 4DDY DN6 5.66038
256 5WRJ A3P 5.66038
257 5TVJ COA 5.66038
258 5FI3 NAP 5.66038
259 5TVJ 7LF 5.66038
260 4WEI GLC GAL 5.66038
261 3CV2 OXL 5.66038
262 1B7T ADP 5.76923
263 1KK8 BEF ADP 5.84416
264 3UIE ANP 6
265 4OI4 ATP 6.08696
266 5W75 GDP 6.13208
267 4LPS GDP 6.13208
268 1DAR GDP 6.13208
269 2OG2 MLI 6.13208
270 3B9Q MLI 6.13208
271 6FAA ADP 6.13208
272 1FNN ADP 6.13208
273 3QXC ATP 6.13208
274 2CHG ANP 6.13208
275 5L3R GCP 6.13208
276 5WRI A3P 6.13208
277 5MZN ADP 6.13208
278 3B8I OXL 6.13208
279 4KVX ACO 6.41026
280 4UXH T5A 6.52174
281 5JBQ GDP 6.60377
282 4P3Y GDP 6.60377
283 4PC3 GDP 6.60377
284 3VMF GTP 6.60377
285 5CK5 GDP 6.60377
286 3WXM GTP 6.60377
287 5IRR GSP 6.60377
288 5TSH ADP 6.60377
289 5TSH ANP 6.60377
290 2IYL GDP 6.60377
291 3A4M ADP 6.60377
292 5VGR GDP 6.60377
293 2PZE ATP 6.60377
294 3B7G ANP 6.60377
295 4WZ6 ATP 6.60377
296 2ORV 4TA 6.60377
297 1M7G ADP 6.63507
298 1M7G ADX 6.63507
299 1M7G AV2 6.63507
300 2YOH WMJ 6.66667
301 2OFW ADX 6.73077
302 2KIN ADP 7
303 4B47 GDP 7.07547
304 6G14 G4P 7.07547
305 3IO3 ADP 7.07547
306 1E2K TMC 7.07547
307 1F5N GNP 7.07547
308 4QOS ADP 7.07547
309 4OHY ANP 7.07547
310 2B8W ALF 5GP 7.07547
311 2ZJ5 ADP 7.07547
312 5I0H ADP BEF 7.07547
313 4A4Z ANP 7.07547
314 5KMS FAD 7.07547
315 2X7I CIT 7.07547
316 4CVN ADP 7.32984
317 4RD0 GDP 7.54717
318 4J0Q GDP 7.54717
319 2QN6 GDP 7.54717
320 1WDT GTP 7.54717
321 2V7Q ATP 7.54717
322 1W0J ADP 7.54717
323 2QEN ADP 7.54717
324 2CK3 ANP 7.54717
325 1IWE IMP 7.54717
326 2CK3 ADP 7.54717
327 1W0J ADP BEF 7.54717
328 2V7Q ADP 7.54717
329 2IS6 ADP 7.54717
330 1YQT ADP 7.54717
331 2CDN ADP 7.54717
332 2ZPA ADP 7.54717
333 3QVV A3P 7.54717
334 3QVV 3QV 7.54717
335 2Z5F A3P 7.54717
336 4KVL PLM 7.54717
337 2PEZ GGZ 7.82123
338 2PEZ DAT 7.82123
339 6A20 ADP 8.00915
340 3EC1 GDP 8.01887
341 5H7K GDP 8.01887
342 4KVA GTP 8.01887
343 1GOT GDP 8.01887
344 5K5Z ANP 8.01887
345 5N69 ADP 8.01887
346 2VB6 ADP BEF 8.01887
347 4PFO ADP 8.01887
348 4PX9 ADP 8.01887
349 1W5T ANP 8.01887
350 1W5T ADP 8.01887
351 2D7D ADP 8.01887
352 4ZDJ UTP 8.01887
353 2ZPT A3P 8.01887
354 2RGX AP5 8.25243
355 1FQK GDP 8.49057
356 3ZFD ANP 8.49057
357 1FQJ GDP 8.49057
358 1G41 ADP 8.49057
359 1OFH ADP 8.49057
360 5I34 GDP 8.49057
361 3EZ2 ADP 8.49057
362 1Z6T ADP 8.49057
363 5J1S ATP 8.49057
364 1P9B GDP 8.49057
365 2J5V PCA 8.49057
366 2A2C NG1 8.49057
367 2A2C ADP 8.49057
368 1FQK ALF 8.49057
369 1J99 AND 8.49057
370 1FQJ ALF 8.49057
371 5EP2 AZU 8.49057
372 4HI0 GDP 8.54271
373 2QG6 NMN 8.54271
374 1P72 ADP 8.96226
375 4ZG4 VO4 ADP 8.96226
376 4R43 GDP 8.96226
377 2CBZ ATP 8.96226
378 5Y6N ADP 8.96226
379 4IOK ADP 8.96226
380 4IOK XPO 8.96226
381 1AQU A3P 8.96226
382 5K04 COA 8.96226
383 1VKJ A3P 8.96226
384 2F3R G5P 9.17874
385 1X6V ADP 9.43396
386 2AWN ADP 9.43396
387 5MEX PAP 9.43396
388 5MEX SZZ 9.43396
389 1OFU GDP 9.43396
390 1ZUI SKM 9.52381
391 2JAQ DCP 9.7561
392 2W58 ADP 9.90099
393 1D2E GDP 9.90566
394 3CNL GNP 9.90566
395 3ZIA ADP 9.90566
396 3ZIA ATP 9.90566
397 1W7J ADP BEF 9.90566
398 2FAH GDP 9.90566
399 3IUY AMP 9.90566
400 4EN4 GT0 9.90566
401 5HCN GCP 10.3774
402 5GOE GDP 10.3774
403 4U00 ADP 10.3774
404 1RJ9 GCP 10.3774
405 4WZA ADP 10.3774
406 4WZA ACP 10.3774
407 2BEK ATP 10.3774
408 3QKT ANP 10.3774
409 1RRC ADP 10.3774
410 2GMV UN8 10.3774
411 1NHX FTB 10.3774
412 1NHX PEP 10.3774
413 2GMV PEP 10.3774
414 5E5U MLI 10.3774
415 5U97 PIT 10.3774
416 1NRJ GTP 10.7595
417 5J1J ANP 10.8491
418 2Y65 ADP 10.8491
419 3V2U ATP 10.8491
420 4KFU ACP 11.3208
421 2BIF SIN 11.3208
422 2BIF ANP 11.3208
423 3DZD ADP 11.3208
424 4YMU ATP 11.3208
425 3C2O NTM 11.3208
426 2R75 01G 11.3208
427 5KSZ GCP 11.5566
428 1Q19 SSC 11.7925
429 1NY5 ADP 12.2642
430 1SVM ATP 12.2642
431 3TBK ANP 12.2642
432 1W4R TTP 12.3077
433 2HF9 GSP 12.7358
434 1YTM ATP 12.7358
435 2GKS ADP 12.7358
436 3ITJ CIT 12.7358
437 5H68 AGS 12.9412
438 4E03 ADP 13.1068
439 1PUJ GNP 13.2075
440 2WHX ADP 13.2075
441 4AG5 ADP 13.2075
442 2JLR ANP 13.2075
443 2X77 GDP 13.2275
444 2IL4 COA 13.5922
445 5LB3 ADP 13.6792
446 2Q2Y ADP 13.6792
447 2Q2Y MKR 13.6792
448 3HU3 AGS 14.1509
449 5IFS ADP 14.1509
450 5X40 ACP 14.1509
451 1GXU 2HP 14.2857
452 1ZJ6 G3D 14.4385
453 5XKT GNP 14.5
454 3DOE GTP 14.5833
455 2RCN GDP 14.6226
456 1R0X ATP 14.6226
457 1F2U ATP 14.8649
458 1KSH GDP 15.0538
459 5VHC BEF ADP 15.0943
460 4NCN GTP 15.566
461 4TMZ GSP 15.566
462 2XT3 ADP 15.566
463 4GOX A3P 15.566
464 1G3M A3P 15.566
465 1G3M PCQ 15.566
466 1B0U ATP 16.0305
467 2XTZ GSP 16.0377
468 3RLF ANP 16.0377
469 2R42 FPS 16.0377
470 5DI3 GNP 16.2162
471 5H67 ATP 16.25
472 5HR5 ADP 16.5094
473 1T8U UAP SGN IDS SGN 16.9811
474 1T8U A3P 16.9811
475 1YZG GDP 17.3184
476 1R4A GNP 17.5758
477 5YT0 GDP 17.9245
478 5FG3 GDP 17.9245
479 1CR1 TTP 18.3962
480 1UPT GTP 18.7134
481 2W83 GTP 18.7879
482 1G7S GDP 18.8679
483 1ZCB GDP 18.8679
484 2VVG ADP 18.8679
485 4KAX GTP 18.9349
486 3PCR GTP 19.1358
487 2A5F GTP 19.4286
488 3N5C GDP 19.7531
489 5EE5 GTP 19.883
490 4YLG GDP 20.2312
491 1HTW ADP 20.2532
492 4TL6 ANP 20.283
493 2ZEJ GDP 20.6522
494 1RE0 GDP 20.7317
495 1S9D GDP 20.7317
496 4BAS GNP 21.608
497 1MR3 G3D 22.0994
498 3AQ4 GDP 22.2826
499 6AU6 GDP 22.6415
500 1CS4 GSP 23.5849
501 2HCJ GDP 24.3243
502 4ZI2 GNP 24.7368
503 3T12 GDP ALF 24.7475
504 3T1O GDP 24.7475
505 4GOJ GNP 24.8677
506 5KSP GDP 25.7895
507 1FZQ GDP 25.9669
508 1M2O GNP 26.8868
509 2QTV GNP 26.8868
510 1ZD9 GDP 27.1277
511 6C90 ADP 28.8462
512 3GJ7 GDP 29.2453
513 3GJ4 GDP 29.2453
514 3GJ8 GDP 29.2453
515 3GJ5 GDP 29.2453
516 3GJX GTP 29.2453
517 4HAT GNP 29.717
518 3M1I GTP 29.717
519 3WYF GTP 29.717
520 5BXQ GDP 29.717
521 3GJ0 GDP 29.717
522 3CH5 GDP 29.717
523 3GJ3 GDP 29.717
524 1IBR GNP 29.717
525 1TAD ALF 31.6038
526 1TAD GDP 31.6038
527 5UWP GNP 32.0755
528 5UWO GNP 32.0755
529 5UWQ GNP 32.0755
530 5UWU GNP 32.0755
531 6CIT GNP 32.0755
532 5UWJ GNP 32.0755
533 5UWI GNP 32.0755
534 5UWR GNP 32.0755
535 5UWW GNP 32.0755
536 5UWH GNP 32.0755
537 5DHF GNP 32.0755
538 5UWT GNP 32.0755
539 5UWS GNP 32.0755
540 5DI9 GNP 32.0755
541 1BH2 GSP 32.5472
542 1Y3A GDP 32.5472
543 1GP2 GDP 32.5472
544 2OM2 GDP 32.5472
545 1SVK ALF GDP 32.5472
546 4V0K GDP 33.7278
547 2G77 GDP 33.8384
548 2G77 AF3 33.8384
549 3WYG GTP 34.6154
550 3Q72 GNP 35.5422
551 5XC5 GTP 35.7955
552 1WA5 GTP 35.7955
553 1Z06 GNP 36.5079
554 3E5H GNP 37.0787
555 4DKX GDP 39.1509
556 1YZN GNP 40
557 3CPJ GDP 41.0377
558 5OEC GDP 42.623
559 5LEF GTP 43.9791
560 5SZH GNP 44.335
561 1OIX GDP 44.5026
562 1OIV GDP 45.0262
563 3TKL GTP 45.4082
564 2EW1 GNP 45.7711
565 1VG0 GDP 45.8937
566 1VG8 GNP 45.8937
567 3BC1 GNP 46.1538
568 2EFE GNH 46.4088
569 1Z0K GTP 46.5116
570 1VG9 GDP 47.027
571 1VG1 GDP 47.027
572 2A9K GDP 47.0588
573 2A5J GDP 47.1204
574 5DIF GNP 47.3684
575 1TU3 GNP 47.3684
576 2Y8E GNP 47.486
577 3MJH GTP 47.619
578 1Z0J GTP 47.6471
579 1R2Q GNP 47.6471
580 1ZC3 GNP 48
581 5JCZ GDP 48.0447
582 1Z2A GDP 48.2143
583 1YVD GNP 48.5207
584 1UAD GNP 48.5714
585 4LX0 BEF GDP 48.5876
586 3SFV GDP 48.6188
587 1YZQ GNP 49.4118
588 2HV8 GTP 49.4186
589 2BME GNP 49.4624
590 2BCG GDP 49.5146
591 4C4P GNP 49.711
592 1U8Z GDP 50
Pocket No.: 2; Query (leader) PDB : 2J0V; Ligand: GDP; Similar sites found with APoc: 12
This union binding pocket(no: 2) in the query (biounit: 2j0v.bio1) has 17 residues
No: Leader PDB Ligand Sequence Similarity
1 2VBQ BSJ 2.42424
2 1SR7 MOF 2.83019
3 2AQJ TRP 3.30189
4 2WET FAD 4.71698
5 1GPE FAD 4.71698
6 5L3S G 5.18868
7 3L6C MLI 6.13208
8 4X1Z FUC GAL NDG 7.07547
9 4NTO 1PW 10.1449
10 2VOH CIT 10.1911
11 1G8K MGD 13.2075
12 3R7F CP 18.8679
Pocket No.: 3; Query (leader) PDB : 2J0V; Ligand: GDP; Similar sites found with APoc: 7
This union binding pocket(no: 3) in the query (biounit: 2j0v.bio4) has 17 residues
No: Leader PDB Ligand Sequence Similarity
1 1XPJ TLA None
2 5ZM4 9FU 2.35849
3 5WQP NCA 4.71698
4 3CU0 UDP 5.66038
5 1YY5 FAD 6.60377
6 4EN4 GT1 9.90566
7 4EN4 ATP 9.90566
Pocket No.: 4; Query (leader) PDB : 2J0V; Ligand: GDP; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 4) in the query (biounit: 2j0v.bio2) has 17 residues
No: Leader PDB Ligand Sequence Similarity
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