Receptor
PDB id Resolution Class Description Source Keywords
2IHO 2.41 Å NON-ENZYME: BINDING CRYSTAL STRUCTURE OF MOA, A LECTIN FROM THE MUSHROOM MARASMI IN COMPLEX WITH THE TRISACCHARIDE GAL(1,3)GAL(1,4)GLCNAC MARASMIUS OREADES BETA-TREFOIL SUGAR BINDING PROTEIN
Ref.: CRYSTAL STRUCTURE OF THE MARASMIUS OREADES MUSHROOM IN COMPLEX WITH A XENOTRANSPLANTATION EPITOPE. J.MOL.BIOL. V. 369 710 2007
Ligand
Ligand Chain:Residue Validity Ligand Warnings Binding Data NGL Viewer Molecular Weight (Da) Formula SMILES
NAG GAL GAL A:297;
A:294;
Valid;
Valid;
none;
none;
submit data
545.491 n/a O=C(N...
View in 3D viewer
90% Homology Family
Leader
PDB id Resolution Class Description Source Keywords
5D63 1.65 Å NON-ENZYME: BINDING MOA-Z-VAD-FMK INHIBITOR COMPLEX, DIRECT/INVERTED DUAL ORIENT MARASMIUS OREADES HYDROLASE PAPAIN-LIKE INHIBITOR PROTEASE FUNGAL
Ref.: AN UNUSUAL MEMBER OF THE PAPAIN SUPERFAMILY: MAPPIN CATALYTIC CLEFT OF THE MARASMIUS OREADES AGGLUTININ WITH A CASPASE INHIBITOR. PLOS ONE V. 11 49407 2016
Members (6)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 473 families.
1 5MU9 - FUC GLA GLA n/a n/a
2 5D61 - FUC GLA GLA n/a n/a
3 5D62 - FUC GAL GLA n/a n/a
4 5D63 - FUC GAL GLA n/a n/a
5 3EF2 - FUC GAL GLA n/a n/a
6 2IHO - NAG GAL GAL n/a n/a
70% Homology Family (6)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 355 families.
1 5MU9 - FUC GLA GLA n/a n/a
2 5D61 - FUC GLA GLA n/a n/a
3 5D62 - FUC GAL GLA n/a n/a
4 5D63 - FUC GAL GLA n/a n/a
5 3EF2 - FUC GAL GLA n/a n/a
6 2IHO - NAG GAL GAL n/a n/a
50% Homology Family (8)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 272 families.
1 5MU9 - FUC GLA GLA n/a n/a
2 5D61 - FUC GLA GLA n/a n/a
3 5D62 - FUC GAL GLA n/a n/a
4 5D63 - FUC GAL GLA n/a n/a
5 3EF2 - FUC GAL GLA n/a n/a
6 2IHO - NAG GAL GAL n/a n/a
7 3PHZ - NAG GAL SIA n/a n/a
8 5MUA - GAL C6 H12 O6 C([C@@H]1[....
Polypharmacology
Similar Ligands
Ligand no: 1; Ligand: NAG GAL GAL; Similar ligands found: 284
No: Ligand ECFP6 Tc MDL keys Tc
1 NAG GAL GAL 1 1
2 GLA GAL NAG 1 1
3 MAN BMA NAG 1 1
4 GAL NAG GAL NAG GAL NAG 0.852941 0.918367
5 NAG GAL GAL NAG 0.852941 0.9375
6 NDG GAL 0.847458 1
7 NLC 0.847458 1
8 GAL NDG 0.847458 1
9 NAG GAL NAG 0.782609 0.9375
10 NAG BMA MAN MAN MAN MAN 0.75 1
11 MAN MAN NAG MAN NAG 0.695122 0.9375
12 NAG NAG BMA MAN MAN 0.695122 0.9375
13 GLC GAL NAG GAL 0.693333 1
14 NAG GAL GAL NAG GAL 0.68 0.9375
15 BGC GAL NAG GAL 0.666667 1
16 LAT NAG GAL 0.666667 1
17 GAL NAG GAL BGC 0.666667 1
18 BMA NAG MAN MAN MAN MAN MAN MAN MAN 0.651163 1
19 GLA GAL BGC 0.636364 0.733333
20 GLA GAL GAL 0.636364 0.733333
21 G6S NAG 0.635135 0.762712
22 GAL NGA GLA BGC GAL 0.632911 1
23 NAG FUC 0.632353 0.934783
24 MAN BMA NAG NAG MAN NAG GAL GAL 0.629214 0.918367
25 NAG MAN GAL BMA NAG MAN NAG GAL 0.629214 0.918367
26 NAG MAN MAN MAN NAG GAL NAG GAL 0.629214 0.918367
27 NAG MAN GAL BMA NDG MAN NAG GAL 0.629214 0.918367
28 NAG GDL 0.623188 0.9375
29 NAG NDG 0.623188 0.9375
30 CBS 0.623188 0.9375
31 CBS CBS 0.623188 0.9375
32 NAG GAL BGC 0.618421 1
33 NAG NAG BMA MAN 0.614458 0.865385
34 GAL BGC NAG GAL 0.61039 1
35 M5G 0.606383 0.9375
36 8VZ 0.602941 0.918367
37 NGA GLA GAL BGC 0.6 1
38 BGC BGC BGC BGC 0.6 0.733333
39 BGC BGC BGC BGC BGC BGC BGC BGC 0.6 0.733333
40 NAG MAN BMA NDG MAN NAG GAL 0.595745 0.918367
41 NAG NAG BMA MAN MAN MAN MAN MAN MAN MAN 0.59375 0.9375
42 FUC GAL NDG 0.592105 0.978261
43 FUL GAL NAG 0.592105 0.978261
44 FUC GAL NAG 0.592105 0.978261
45 DR2 0.592105 0.978261
46 NDG GAL FUC 0.592105 0.978261
47 NAG NAG NAG NAG NAG NAG 0.589041 0.918367
48 NDG NAG NAG NDG 0.589041 0.918367
49 NDG NAG NAG 0.589041 0.918367
50 NAG NAG NAG NDG 0.589041 0.918367
51 NAG NAG NAG NAG NDG 0.589041 0.918367
52 NAG NAG NDG 0.589041 0.918367
53 NDG NAG NAG NDG NAG 0.589041 0.918367
54 NAG NAG NAG 0.589041 0.918367
55 NAG NAG NAG NAG 0.589041 0.918367
56 NDG NAG NAG NAG 0.589041 0.918367
57 CTO 0.589041 0.918367
58 NAG NAG NAG NAG NAG 0.589041 0.918367
59 NAG NAG NAG NAG NAG NAG NAG NAG 0.589041 0.918367
60 NAG NAG NAG NAG NDG NAG 0.589041 0.918367
61 A2G GAL 0.57971 1
62 GAL A2G 0.57971 1
63 GAL NGA 0.57971 1
64 FUC BGC GAL NAG GAL 0.579545 0.978261
65 GAL NAG MAN 0.578947 1
66 MAN NAG GAL 0.578947 1
67 GLC BGC BGC BGC BGC BGC BGC 0.575758 0.733333
68 BGC BGC BGC 0.575758 0.733333
69 BGC BGC BGC BGC BGC 0.575758 0.733333
70 BGC BGC BGC GLC BGC BGC 0.575758 0.733333
71 GLC BGC BGC BGC 0.575758 0.733333
72 BGC BGC BGC ASO BGC BGC ASO 0.575758 0.733333
73 GAL NGA A2G 0.567568 0.918367
74 FUC GAL NAG GAL BGC 0.550562 0.978261
75 TCG 0.55 0.775862
76 CTO TMX 0.55 0.775862
77 UNU GAL NAG 0.542169 0.918367
78 GLA GAL NAG FUC GAL GLC 0.537634 0.978261
79 NAG BMA NAG MAN MAN NAG NAG 0.536842 0.918367
80 GAL MGC 0.535211 0.957447
81 A2G GAL NAG FUC 0.534091 0.918367
82 GAL NAG GAL 0.530864 0.957447
83 MDM 0.530303 0.73913
84 GAL MBG 0.530303 0.73913
85 M13 0.530303 0.73913
86 MAN MAN MAN GLC 0.527027 0.733333
87 GLC GAL NAG GAL FUC FUC 0.526882 0.957447
88 BGC GAL NAG GAL FUC FUC 0.526882 0.957447
89 FUC NAG GAL 0.518987 0.978261
90 GAL NAG FUC 0.518987 0.978261
91 FUC NDG GAL 0.518987 0.978261
92 GAL NDG FUC 0.518987 0.978261
93 HS2 0.518987 0.877551
94 NAG BMA 0.513514 0.897959
95 BGC BGC GLC 0.507042 0.733333
96 NAG NAG BMA 0.506024 0.865385
97 NAG NDG BMA 0.506024 0.865385
98 N9S 0.5 0.733333
99 LAT 0.5 0.733333
100 CBI 0.5 0.733333
101 GLA GAL 0.5 0.733333
102 GLA GLA 0.5 0.733333
103 BMA BMA 0.5 0.733333
104 GLC GAL 0.5 0.733333
105 GAL GLC 0.5 0.733333
106 CBK 0.5 0.733333
107 MAN GLC 0.5 0.733333
108 BGC GLC 0.5 0.733333
109 GAL BGC 0.5 0.733333
110 BMA GAL 0.5 0.733333
111 BGC GAL 0.5 0.733333
112 4U2 0.5 0.882353
113 MAL MAL 0.5 0.717391
114 LBT 0.5 0.733333
115 P3M 0.5 0.6
116 B2G 0.5 0.733333
117 M3M 0.5 0.733333
118 GLC BGC 0.5 0.733333
119 LB2 0.5 0.733333
120 MAB 0.5 0.733333
121 MAL 0.5 0.733333
122 BGC BMA 0.5 0.733333
123 FUC GAL NAG A2G 0.494505 0.833333
124 1GN ACY GAL ACY 1GN BGC GAL BGC 0.494505 0.9375
125 ACY 1GN GAL 1GN BGC ACY GAL BGC 0.494505 0.9375
126 FUC BGC GAL NAG 0.494382 0.978261
127 GCS GCS NAG 0.494118 0.9375
128 U63 0.492754 0.673469
129 SIA GAL NAG 0.489796 0.865385
130 NAG SIA GAL 0.489796 0.865385
131 NAG NAG NAG NAG NAG NAG NAG 0.488636 0.833333
132 NGA GAL BGC 0.4875 1
133 SN5 SN5 0.486842 0.803922
134 GLA NAG GAL FUC 0.482759 0.978261
135 GAL NAG GAL FUC 0.482759 0.978261
136 GLC GAL NAG GAL FUC A2G 0.48 0.918367
137 A2G GAL NAG FUC GAL GLC 0.48 0.918367
138 NAG MAN GAL MAN MAN NAG GAL 0.478723 0.9375
139 NAG MBG 0.473684 0.957447
140 BEK GAL NAG 0.473118 0.789474
141 GLC BGC BGC BGC BGC 0.471429 0.733333
142 BMA MAN BMA 0.471429 0.733333
143 CTT 0.471429 0.733333
144 CT3 0.471429 0.733333
145 BGC GLC GLC GLC GLC 0.471429 0.733333
146 DXI 0.471429 0.733333
147 CE5 0.471429 0.733333
148 GLC GLC GLC GLC GLC GLC GLC GLC 0.471429 0.733333
149 BGC BGC BGC GLC 0.471429 0.733333
150 GLC GLC GLC GLC GLC GLC GLC GLC GLC 0.471429 0.733333
151 BMA BMA BMA BMA BMA BMA 0.471429 0.733333
152 BGC GLC GLC GLC 0.471429 0.733333
153 MLR 0.471429 0.733333
154 GLC GLC GLC GLC GLC 0.471429 0.733333
155 CE6 0.471429 0.733333
156 CTR 0.471429 0.733333
157 BGC BGC BGC BGC BGC BGC 0.471429 0.733333
158 BGC GLC GLC 0.471429 0.733333
159 GLC BGC BGC BGC BGC BGC 0.471429 0.733333
160 GLC BGC BGC 0.471429 0.733333
161 CEY 0.471429 0.733333
162 CE8 0.471429 0.733333
163 MAN BMA BMA 0.471429 0.733333
164 BMA BMA BMA 0.471429 0.733333
165 GLC BGC GLC 0.471429 0.733333
166 GLC GLC BGC GLC GLC GLC GLC 0.471429 0.733333
167 GLC GLC BGC 0.471429 0.733333
168 GLC GAL GAL 0.471429 0.733333
169 MT7 0.471429 0.733333
170 MTT 0.471429 0.733333
171 GLC GLC GLC GLC GLC GLC GLC 0.471429 0.733333
172 GLA GAL GLC 0.471429 0.733333
173 BGC BGC BGC BGC BGC BGC BGC BGC BGC 0.471429 0.733333
174 GAL GAL GAL 0.471429 0.733333
175 BMA BMA BMA BMA BMA 0.471429 0.733333
176 BGC GLC GLC GLC GLC GLC GLC 0.471429 0.733333
177 CEX 0.471429 0.733333
178 B4G 0.471429 0.733333
179 MAN MAN BMA BMA BMA BMA 0.471429 0.733333
180 MAN BMA BMA BMA BMA 0.471429 0.733333
181 4U1 0.465347 0.865385
182 NAG GAL SIA 0.465347 0.849057
183 ASG 0.464789 0.66129
184 NGA SER GAL 0.463415 0.918367
185 GAL SER A2G 0.463415 0.918367
186 GAL TNR 0.463415 0.918367
187 A2G SER GAL 0.463415 0.918367
188 NOK GAL 0.461538 0.814815
189 GAL NOK 0.461538 0.814815
190 NAG GAL 0.460526 1
191 GAL NAG 0.460526 1
192 NGA GAL 0.460526 1
193 NAG GAL NGC 0.457143 0.865385
194 LOG GAL 0.455696 0.803571
195 GAL LOG 0.455696 0.803571
196 NAG BMA MAN MAN MAN MAN MAN MAN MAN 0.455446 0.918367
197 8VW 0.451613 0.849057
198 NAG NAG BMA MAN MAN MAN MAN 0.448598 0.865385
199 GAL A2G THR 0.447059 0.9
200 NGA 0.446154 0.888889
201 HSQ 0.446154 0.888889
202 BM3 0.446154 0.888889
203 NDG 0.446154 0.888889
204 NAG 0.446154 0.888889
205 A2G 0.446154 0.888889
206 BMA BMA BMA BMA BMA BMA MAN 0.445946 0.717391
207 CGC 0.445946 0.733333
208 MAN BMA BMA BMA BMA BMA 0.445946 0.717391
209 MAG FUC GAL 0.445783 0.9375
210 GLA EGA 0.444444 0.73913
211 NAG NAG BMA BMA 0.444444 0.833333
212 NDG NAG 0.443038 0.918367
213 DR5 0.442857 0.73913
214 MMA MAN 0.442857 0.73913
215 FUC GAL NAG FUC 0.44186 0.957447
216 BCW 0.44186 0.957447
217 FUC NDG GAL FUC 0.44186 0.957447
218 BDZ 0.44186 0.957447
219 GAL NDG FUC FUC 0.44186 0.957447
220 FUC NAG GAL FUC 0.44186 0.957447
221 GAL A2G MBN 0.44186 0.9375
222 GAL NAG FUC FUC 0.44186 0.957447
223 FUC GAL NDG FUC 0.44186 0.957447
224 LAT GLA 0.441176 0.733333
225 2M4 0.441176 0.733333
226 BGC BGC 0.441176 0.733333
227 MAN MAN 0.441176 0.733333
228 NAG MAN MMA 0.440476 0.957447
229 BMA MAN MAN 0.44 0.733333
230 BMA MAN 0.43662 0.680851
231 NAG NGA 0.435897 0.9375
232 NAG A2G 0.435897 0.9375
233 NAG GAL FUC 0.435294 0.978261
234 DR3 0.435294 0.978261
235 BGC GAL NAG SIA GAL 0.431034 0.849057
236 SIA GAL NAG GAL GLC 0.431034 0.849057
237 SIA GAL NAG GAL BGC 0.431034 0.849057
238 MAN NAG 0.428571 1
239 NPO A2G GAL 0.426966 0.714286
240 GAL A2G NPO 0.426966 0.714286
241 GLC GLC XYP 0.425 0.733333
242 FUC NAG 0.423077 0.956522
243 NAG GCU NAG GCD 0.423077 0.833333
244 4MU MAN MAN 0.422222 0.660377
245 BGC BGC ZZ1 0.422222 0.660377
246 A2G GAL BGC FUC 0.421053 0.978261
247 IGC 0.420561 0.741379
248 LGN 0.420561 0.741379
249 MAN MAN BMA MAN 0.419753 0.733333
250 MAN MAN MAN MAN 0.419753 0.733333
251 MAN MAN BMA 0.418919 0.733333
252 BGC GLA GAL FUC 0.418605 0.755556
253 FUC BGC GAL 0.417722 0.755556
254 MAN MMA MAN 0.417722 0.73913
255 FUC GAL NAG GAL FUC 0.414894 0.957447
256 MAN BMA MAN MAN MAN 0.414634 0.733333
257 M5S 0.414634 0.733333
258 CG3 A2G GAL 0.413043 0.703125
259 A2G MBG 0.4125 0.957447
260 MBG A2G 0.4125 0.957447
261 OPM MAN MAN 0.411765 0.653846
262 BMA BMA MAN 0.410959 0.717391
263 GAL FUC 0.410959 0.733333
264 FUC GLA GLA 0.405063 0.755556
265 GLA GAL FUC 0.405063 0.755556
266 GLA GLA FUC 0.405063 0.755556
267 GAL GAL FUC 0.405063 0.755556
268 FUC GAL GLA 0.405063 0.755556
269 8VQ 0.40404 0.849057
270 GAL GAL GLC EMB MEC 0.40404 0.75
271 TRE 0.403226 0.733333
272 NAG BDP 0.402439 0.916667
273 MAN MAN MAN BMA MAN 0.402299 0.733333
274 FUC GLA A2G 0.402299 0.978261
275 FUC GL0 A2G 0.402299 0.978261
276 A2G GLA FUC 0.402299 0.978261
277 NGA GAL FUC 0.402299 0.978261
278 FUC GAL A2G 0.402299 0.978261
279 A2G GAL FUC 0.402299 0.978261
280 G2F BGC BGC BGC BGC BGC 0.4 0.66
281 GGD 0.4 0.625
282 MAL EDO 0.4 0.702128
283 GLA MBG 0.4 0.73913
284 FUC NAG GLA GAL 0.4 0.957447
Similar Binding Sites (Proteins are less than 50% similar to leader)
Pocket No.: 1; Query (leader) PDB : 5D63; Ligand: FUC GLA GLA; Similar sites found: 294
This union binding pocket(no: 1) in the query (biounit: 5d63.bio1) has 12 residues
No: Leader PDB Ligand P-value (APoc) PS_Score (APoc) Sequence Similarity
1 2ALG HP6 0.01064 0.41397 None
2 2ALG DAO 0.01064 0.41397 None
3 1R0X ATP 0.03265 0.40607 None
4 1J5P NAD 0.007374 0.43041 0.790514
5 2YVF FAD 0.03248 0.42614 1.02389
6 2YVF NAD 0.03338 0.42614 1.02389
7 1A8R GTP 0.008557 0.41647 1.35747
8 2HGZ PBF 0.003411 0.44133 1.36519
9 1H2B NAJ 0.01328 0.42466 1.36519
10 1D6H COA 0.03188 0.41592 1.36519
11 1P72 ADP 0.02933 0.40609 1.36519
12 4IS0 GDS 0.006909 0.41681 1.65975
13 1UXG NAD 0.001364 0.4774 1.70648
14 1UXG FUM 0.001364 0.4774 1.70648
15 1E7S NAP 0.001812 0.46422 1.70648
16 1C0I BE2 0.01191 0.43862 1.70648
17 1C0I FAD 0.01191 0.43862 1.70648
18 4R33 TRP 0.006984 0.43788 1.70648
19 4R33 SAH 0.006984 0.43788 1.70648
20 3TKA CTN 0.007996 0.43763 1.70648
21 3CQD ATP 0.009433 0.43608 1.70648
22 1VJT NAD 0.006574 0.42159 1.70648
23 3SSO SAH 0.01322 0.40971 1.70648
24 3B1F NAD 0.001013 0.46178 1.72414
25 1JA9 NDP 0.01004 0.45643 1.82482
26 1JA9 PYQ 0.03248 0.40164 1.82482
27 1C4U IH1 0.0009064 0.45898 1.9305
28 1UBY DMA 0.0001751 0.48717 2.04778
29 1WVG APR 0.002559 0.44863 2.04778
30 3L24 GOA 0.001572 0.44672 2.04778
31 2C7G FAD 0.01223 0.44497 2.04778
32 2C7G ODP 0.01209 0.44451 2.04778
33 1JIL 485 0.003573 0.43343 2.04778
34 1R37 NAD 0.01054 0.43055 2.04778
35 1CL2 PPG 0.00524 0.426 2.04778
36 3JDW ORN 0.003983 0.42524 2.04778
37 1GSA ADP 0.03211 0.41892 2.04778
38 2GSD NAD 0.02039 0.41797 2.04778
39 3CL7 HYN 0.01356 0.41393 2.04778
40 3A1I UNU 0.0002411 0.41266 2.04778
41 1U7Z PMT 0.02848 0.4089 2.04778
42 4M51 BEZ 0.01065 0.40079 2.04778
43 4RJK PYR 0.03157 0.40017 2.04778
44 3N5O GSH 0.01354 0.40574 2.12766
45 3U4C NDP 0.01513 0.41721 2.13523
46 2FWP CIT 0.03772 0.40089 2.18579
47 1DLJ UGA 0.001373 0.48825 2.38908
48 1DLJ NAI 0.001373 0.48825 2.38908
49 1XHL NDP 0.002388 0.45859 2.38908
50 1TIW TFB 0.00577 0.44736 2.38908
51 1TIW FAD 0.00577 0.44736 2.38908
52 1KBJ FMN 0.01047 0.42055 2.38908
53 2NLI LAC 0.03203 0.42045 2.38908
54 2NLI FMN 0.03203 0.42045 2.38908
55 2ZJ3 G6P 0.007243 0.41971 2.38908
56 4N02 FNR 0.03948 0.41729 2.38908
57 4WBD CIT 0.005306 0.41434 2.38908
58 1V1A ADP 0.01843 0.4132 2.38908
59 2IZ1 ATR 0.00294 0.41159 2.38908
60 4K5S PM0 0.04749 0.41113 2.38908
61 4K5S FAD 0.02558 0.41113 2.38908
62 2PUL ACP 0.008449 0.41091 2.38908
63 1V1A KDG 0.01225 0.41036 2.38908
64 4O1M NAD 0.02459 0.40854 2.38908
65 3FXU TSU 0.01795 0.40834 2.38908
66 1T57 FMN 0.001659 0.45211 2.42718
67 4C0X AQN 0.01792 0.4162 2.46305
68 4C0X FMN 0.01474 0.4151 2.46305
69 2BNE U5P 0.006264 0.4407 2.48963
70 1I9G SAM 0.01575 0.43266 2.5
71 2BGM NAJ 0.001312 0.49423 2.51799
72 2B4Q NAP 0.02779 0.40603 2.53623
73 3R35 4CO 0.01079 0.42657 2.64901
74 1P9P SAH 0.008865 0.41922 2.68199
75 1ECC PCP 0.001228 0.45981 2.73038
76 1TDF FAD 0.01087 0.44142 2.73038
77 1OTH PAO 0.006227 0.43902 2.73038
78 3LZW NAP 0.02003 0.43554 2.73038
79 1TDF NAP 0.02894 0.43389 2.73038
80 3L6R MLI 0.001969 0.42583 2.73038
81 4LNL PLG 0.003965 0.42308 2.73038
82 3LZW FAD 0.02163 0.41972 2.73038
83 1TOI HCI 0.01595 0.41614 2.73038
84 1YS4 NAP 0.01056 0.41578 2.73038
85 4GYW UDP 0.02118 0.41393 2.73038
86 1V35 NAI 0.0339 0.41292 2.73038
87 1B9I PXG 0.02114 0.40361 2.73038
88 4RNV FMN 0.01379 0.40255 2.73038
89 4RNV HBA 0.0145 0.40255 2.73038
90 3KJI ADP 0.008757 0.41023 2.75591
91 3FS8 ACO 0.01356 0.45616 2.9304
92 1QB7 ADE 0.00353 0.42035 2.9661
93 3RFV NAI 0.002955 0.44879 2.99625
94 3RFV 15L 0.02787 0.40224 2.99625
95 3UIE ANP 0.00163 0.43471 3
96 2F5T MAL 0.001429 0.44914 3.00429
97 3WBF NAP 0.0003413 0.49372 3.07167
98 3WBF API 0.0004568 0.49372 3.07167
99 4ARF IP8 GLY PRO ALA 0.001264 0.44708 3.07167
100 4HA6 FAD 0.01254 0.43581 3.07167
101 1DSS NAD 0.006223 0.43093 3.07167
102 1P9B IMO 0.009934 0.42012 3.07167
103 2AEB ABH 0.01773 0.41927 3.07167
104 1TUF AZ1 0.01315 0.41454 3.07167
105 1PL6 572 0.02952 0.40816 3.07167
106 1PL6 NAD 0.01554 0.40816 3.07167
107 1P9B HDA 0.00509 0.40505 3.07167
108 3GE7 AFQ 0.0363 0.40386 3.07167
109 1DKU AP2 0.02691 0.40361 3.07167
110 2X61 NGA GAL SIA 0.02279 0.43205 3.10078
111 2X61 CH 0.02163 0.42066 3.10078
112 3VPD ANP 0.01401 0.40858 3.20285
113 3LTW HLZ 0.001628 0.42216 3.21429
114 3QQA TCH 0.02145 0.40179 3.24074
115 3PNL ADP 0.007292 0.42306 3.31754
116 1MVN FMN 0.04296 0.40522 3.34928
117 3K56 IS3 0.00456 0.42044 3.38346
118 4G10 GSH 0.004827 0.42158 3.39623
119 1GAD NAD 0.002625 0.44967 3.41297
120 3A2Q ACA ACA 0.001378 0.44769 3.41297
121 1ZFJ IMP 0.01707 0.42925 3.41297
122 2XVE FAD 0.04633 0.41883 3.41297
123 3ZY6 GFB 0.01005 0.41508 3.41297
124 3ZPG 5GP 0.008874 0.41157 3.41297
125 2I4O ATP 0.006823 0.40808 3.41297
126 3PFG SAM 0.02285 0.42042 3.42205
127 3PFG TLO 0.02285 0.42042 3.42205
128 1OAA OAA 0.01941 0.42652 3.4749
129 3BL6 FMC 0.004112 0.42878 3.47826
130 2PWY SAH 0.01999 0.40472 3.48837
131 4BAS GNP 0.01548 0.40662 3.51759
132 1SBZ FMN 0.0213 0.41381 3.5533
133 3GEG NAD 0.008291 0.42805 3.64372
134 1UZN NAP 0.0111 0.40571 3.64372
135 1UAY ADN 0.009832 0.4059 3.71901
136 3UH0 TSB 0.001116 0.4617 3.75427
137 2P41 SAH 0.001226 0.45211 3.75427
138 2YIV YIV 0.0008202 0.45057 3.75427
139 3DAG FEG 0.003995 0.43977 3.75427
140 3MCT SAH 0.002964 0.43893 3.75427
141 4I71 AGV 0.002506 0.43833 3.75427
142 1VDC FAD 0.01785 0.43159 3.75427
143 3MAG 3MA 0.01335 0.41092 3.75427
144 3A8U PLP 0.005178 0.40474 3.75427
145 4CIB 7UZ 0.005398 0.40399 3.75427
146 2XK9 XK9 0.03856 0.40364 3.75427
147 1SS4 GSH 0.0006512 0.49913 3.92157
148 1SS4 CIT 0.01374 0.45171 3.92157
149 1R18 SAH 0.003415 0.43795 3.96476
150 3Q9T FAY 0.002656 0.46353 4.09556
151 3F3E LEU 0.00339 0.45736 4.09556
152 2PT9 S4M 0.004991 0.43533 4.09556
153 2PT9 2MH 0.008361 0.43533 4.09556
154 1HEX NAD 0.006075 0.4343 4.09556
155 3IL6 B83 0.005975 0.42345 4.09556
156 1D3V ABH 0.009727 0.42202 4.09556
157 1XOC VAL ASP SER LYS ASN THR SER SER TRP 0.02167 0.42154 4.09556
158 1RY2 AMP 0.009987 0.42149 4.09556
159 3C1O NAP 0.009299 0.42143 4.09556
160 3NNF AKG 0.002396 0.41525 4.09556
161 2DKH FAD 0.02293 0.4134 4.09556
162 4QN7 G39 0.03756 0.4052 4.09556
163 1O6B ADP 0.04299 0.41028 4.14201
164 3OZG SSI 0.007579 0.41298 4.4
165 4IVG ANP 0.003469 0.43936 4.43686
166 1Q0H FOM 0.01518 0.43345 4.43686
167 1Q0H NDP 0.01637 0.43345 4.43686
168 4IOK XPO 0.007913 0.42308 4.43686
169 2H6T IVA VAL VAL STA ALA STA 0.007478 0.41529 4.43686
170 2J8Z NAP 0.01787 0.41383 4.43686
171 2X0K PPV 0.005233 0.40609 4.43686
172 2HW1 FRU 0.006115 0.40173 4.43686
173 4IOK ADP 0.03051 0.40041 4.43686
174 3AJ6 NGA 0.00001166 0.58479 4.54545
175 1V2G OCA 0.004818 0.41705 4.73684
176 3CBG SAH 0.01516 0.40169 4.74138
177 9LDB NAD 0.001186 0.4715 4.77816
178 3ZS7 ATP 0.001588 0.45297 4.77816
179 1PDZ PGA 0.0003994 0.42545 4.77816
180 4INB 1F6 0.001295 0.45311 4.79452
181 4F8L GAL 0.007377 0.43298 4.82759
182 2QDT I38 0.004596 0.42251 4.83271
183 1PR9 NAP 0.01684 0.41977 4.91803
184 3F81 STT 0.005018 0.41542 4.91803
185 3D3W NAP 0.03776 0.40087 4.91803
186 2WCV FUC 0.001107 0.44191 5
187 2GJ3 FAD 0.01909 0.41432 5
188 1R5A GTS 0.009035 0.4003 5.04587
189 4BI7 PGA 0.006262 0.40708 5.05837
190 1IYE PGU 0.0003353 0.49715 5.11945
191 4G1V FAD 0.003587 0.4449 5.11945
192 4PLG OXM 0.01182 0.43138 5.11945
193 4PLG NAI 0.01182 0.43138 5.11945
194 1LCP PLU 0.006299 0.43069 5.11945
195 3W2W ATP 0.002545 0.42902 5.11945
196 3AHC TPP 0.01168 0.42373 5.11945
197 4W6Z ETF 0.008799 0.4045 5.11945
198 1T8U UAP SGN IDS SGN 0.009082 0.4379 5.14706
199 1C3V NDP 0.002286 0.45817 5.30612
200 4JCA CIT 0.007196 0.42413 5.38922
201 1B8U OAA 0.008888 0.43175 5.46075
202 1B8U NAD 0.004284 0.43175 5.46075
203 3TCT 3MI 0.0235 0.42863 5.51181
204 4UBP HAE 0.01953 0.40122 5.55556
205 2GDZ NAD 0.03269 0.4027 5.61798
206 4TMK T5A 0.007348 0.43564 5.6338
207 1YOA FMN 0.00161 0.4671 5.66038
208 4DN8 BMA 0.003234 0.40989 5.76923
209 1I2B UPG 0.0005636 0.51089 5.80205
210 1I2B USQ 0.0005636 0.51089 5.80205
211 1I2B NAD 0.0005636 0.51089 5.80205
212 2D0V PQQ 0.002698 0.43888 5.80205
213 5T0A A3P 0.005053 0.41494 5.80205
214 1PEA ACM 0.005738 0.41282 5.80205
215 3TA2 AKG 0.003734 0.4455 5.9322
216 3TA2 ATP 0.03035 0.40811 5.9322
217 3S2Y FMN 0.01444 0.4045 6.03015
218 2YC5 6BC 0.008409 0.43633 6.14035
219 3Q3C NAD 0.03214 0.4218 6.14334
220 4M5P MLA 0.01432 0.40943 6.14334
221 2YBQ UP2 0.03282 0.40902 6.14334
222 4M5P 23W 0.01065 0.40078 6.14334
223 3DCM SAM 0.002197 0.44287 6.25
224 3R51 MMA 0.001955 0.4423 6.25
225 1B74 DGN 0.001455 0.43945 6.29921
226 4USQ FAD 0.04191 0.40189 6.48464
227 1YBH P22 0.0006385 0.45213 6.82594
228 1YBH FAD 0.008666 0.43988 6.82594
229 4A6D SAM 0.003823 0.43212 6.82594
230 1TU3 GNP 0.005348 0.43396 7.01754
231 1FIQ MTE 0.003845 0.44627 7.16724
232 1FIQ SAL 0.004368 0.44627 7.16724
233 2Q3M MLA 0.003214 0.43221 7.16724
234 4ZGR NGA GAL 0.00002244 0.56991 7.28745
235 1H8G CHT 0.009103 0.42825 7.36842
236 1UJ5 5RP 0.005359 0.41506 7.48899
237 4B9E FAH 0.005852 0.40556 7.50853
238 3O03 NAP 0.04196 0.41859 7.56014
239 3O03 GCO 0.009238 0.40708 7.56014
240 3ACC 5GP 0.008697 0.40101 7.73481
241 1QD0 RR6 0.0002317 0.40254 7.8125
242 1KOL NAD 0.005455 0.44639 7.84983
243 2OYS FMN 0.002799 0.44005 7.85124
244 2YK7 CSF 0.005347 0.42561 8.19113
245 1EDO NAP 0.04243 0.42418 8.19672
246 3ICC NAP 0.01244 0.42485 8.23529
247 1QF5 RPL 0.008348 0.44789 8.53242
248 1QF5 GDP 0.008348 0.44789 8.53242
249 4KQI RBZ 0.009057 0.43015 8.53242
250 4KQI NIO 0.009057 0.43015 8.53242
251 2ZWS PLM 0.01 0.42613 8.53242
252 2DTX BMA 0.01556 0.4276 8.71212
253 4LSJ LSJ 0.008436 0.41851 8.91473
254 3DDC GNP 0.01107 0.41944 9.03614
255 1L1Q 9DA 0.01071 0.4121 9.13978
256 2BZ1 TAU 0.01123 0.42354 9.18367
257 2C31 ADP 0.02392 0.43817 9.21502
258 1F74 NAY 0.003908 0.4256 9.21502
259 2NX1 RP5 0.02164 0.40867 9.3633
260 2NX1 PEP 0.03173 0.40089 9.3633
261 2XDQ MGX 0.008324 0.41287 9.55631
262 3WE0 FAD 0.04958 0.4064 9.55631
263 4EXO PYR 0.008799 0.4045 9.58904
264 1YAG ATP 0.001565 0.45504 9.6
265 4KCF AKM 0.03081 0.42129 10.1322
266 4OUJ LBT 0.00001301 0.59258 10.2389
267 4PO2 ASN ARG LEU LEU LEU THR GLY 0.02055 0.40264 10.6383
268 4LO2 GAL BGC 0.00002563 0.56727 10.9215
269 2CKM AA7 0.02315 0.42103 10.9215
270 1NVU GTP 0.04261 0.41696 10.9215
271 2P1M IHP 0.003607 0.4418 11.25
272 4DQ2 BTX 0.002902 0.45059 11.2628
273 2Q97 ATP 0.0004605 0.47722 11.6279
274 2PNZ UDP 0.01823 0.40945 11.6466
275 3ZLM ANP 0.01246 0.40735 11.7021
276 1V2X SAM 0.001019 0.45775 11.8557
277 4Q3R XA2 0.0195 0.4081 11.9454
278 4M2K PLP 0.007319 0.4042 11.9454
279 1JUV NDP 0.005249 0.43581 12.9534
280 3TO7 COA 0.01541 0.42683 13.0435
281 1QH9 LAC 0.004826 0.40273 13.7931
282 4GQB 0XU 0.03667 0.41891 15.0171
283 4BMO FMN 0.001557 0.45852 16.3823
284 1H9G COA MYR 0.01751 0.41163 16.4609
285 2X2T GAL NGA 0.0007922 0.40145 16.9935
286 2D24 XYS XYS 0.000318 0.5003 17.0648
287 1NU4 MLA 0.005619 0.43909 17.5258
288 1UO5 PIH 0.0007378 0.48457 17.6471
289 1UO4 PIH 0.003708 0.43826 17.6471
290 1PTR PRB 0.007117 0.40191 18
291 4LFL TG6 0.006913 0.40784 22.2222
292 3H86 AP5 0.00691 0.45553 22.9167
293 4G9N NGA 0.00003882 0.56256 27.2727
294 4OWK NGA 0.00001758 0.57063 36.2319
Pocket No.: 2; Query (leader) PDB : 5D63; Ligand: FUC GAL GLA; Similar sites found: 166
This union binding pocket(no: 2) in the query (biounit: 5d63.bio1) has 15 residues
No: Leader PDB Ligand P-value (APoc) PS_Score (APoc) Sequence Similarity
1 1BTN I3P 0.03709 0.40622 None
2 1D6H COA 0.01219 0.42169 1.36519
3 3TKA CTN 0.01781 0.43077 1.70648
4 4R33 SAH 0.00837 0.41873 1.70648
5 4R33 TRP 0.00837 0.41873 1.70648
6 3CQD ATP 0.01358 0.41396 1.70648
7 1C0I BE2 0.02298 0.41105 1.70648
8 1C0I FAD 0.02298 0.41105 1.70648
9 1UXG NAD 0.02509 0.40324 1.70648
10 1UXG FUM 0.02509 0.40324 1.70648
11 3B1F NAD 0.007626 0.40658 1.72414
12 4B16 NAG 0.01999 0.41063 1.8797
13 1GSA GSH 0.001055 0.46675 2.04778
14 4RJK PYR 0.01008 0.4347 2.04778
15 1WVG APR 0.002987 0.42819 2.04778
16 2C7G ODP 0.0189 0.4209 2.04778
17 2C7G FAD 0.01956 0.4209 2.04778
18 1UBY DMA 0.002435 0.41904 2.04778
19 4M51 BEZ 0.01052 0.40974 2.04778
20 1R37 NAD 0.0154 0.40844 2.04778
21 1JIL 485 0.006932 0.40478 2.04778
22 1RYI GOA 0.03731 0.40461 2.04778
23 3U4C NDP 0.01485 0.40324 2.13523
24 4WBD CIT 0.000613 0.46652 2.38908
25 2NLI FMN 0.02177 0.41521 2.38908
26 2NLI LAC 0.02177 0.41521 2.38908
27 1XHL NDP 0.01132 0.41193 2.38908
28 3P3N AKG 0.005472 0.40957 2.38908
29 4K5S PM0 0.03228 0.40667 2.38908
30 4K5S FAD 0.01596 0.40667 2.38908
31 1KBJ FMN 0.01197 0.40312 2.38908
32 1DLJ NAI 0.04203 0.40215 2.38908
33 3HY3 10F 0.01166 0.4006 2.46305
34 2BNE U5P 0.006059 0.42535 2.48963
35 1I9G SAM 0.03941 0.40045 2.5
36 3R35 4CO 0.01577 0.40458 2.64901
37 1P9P SAH 0.001947 0.4308 2.68199
38 3ZGE ASP 0.001825 0.44476 2.73038
39 4GYW UDP 0.008744 0.41674 2.73038
40 3LZW FAD 0.01299 0.41582 2.73038
41 1OTH PAO 0.01201 0.41083 2.73038
42 3L6R MLI 0.007205 0.41061 2.73038
43 1V6A TRE 0.005959 0.40223 2.73038
44 1MZV AMP 0.000444 0.42549 2.97872
45 3RFV 15L 0.01345 0.4024 2.99625
46 1P7T PYR 0.01652 0.43807 3.07167
47 2J7T 274 0.005565 0.42125 3.07167
48 4TSK NDP 0.03934 0.40752 3.07167
49 4HA6 FAD 0.03018 0.40409 3.07167
50 2X61 NGA GAL SIA 0.01919 0.42196 3.10078
51 2X61 CH 0.02149 0.40714 3.10078
52 2WBV SIA 0.01456 0.44183 3.1746
53 2H6B 3C4 0.003701 0.42432 3.2
54 3LTW HLZ 0.00335 0.41862 3.21429
55 1VR0 3SL 0.001866 0.41116 3.23887
56 3A2Q ACA ACA 0.002013 0.42233 3.41297
57 3ZPG 5GP 0.0103 0.41726 3.41297
58 1Q3Q ANP 0.04887 0.40184 3.41297
59 1OAA OAA 0.0326 0.40258 3.4749
60 3GEG NAD 0.01313 0.4042 3.64372
61 4JLV ADP 0.02822 0.40681 3.71747
62 2XK9 XK9 0.00148 0.45226 3.75427
63 2P41 SAH 0.003848 0.41317 3.75427
64 1SS4 GSH 0.004071 0.46246 3.92157
65 2PT9 S4M 0.0006176 0.45658 4.09556
66 2PT9 2MH 0.001174 0.45658 4.09556
67 1XOC VAL ASP SER LYS ASN THR SER SER TRP 0.0111 0.42074 4.09556
68 3Q9T FAY 0.01182 0.41761 4.09556
69 3C1O NAP 0.004983 0.41741 4.09556
70 3F3E LEU 0.01431 0.41298 4.09556
71 2EB5 OXL 0.002789 0.422 4.11985
72 1Q0H NDP 0.02926 0.40786 4.43686
73 1Q0H FOM 0.02704 0.40786 4.43686
74 3AJ6 NGA 0.0000177 0.59519 4.54545
75 9LDT OXM 0.003815 0.44694 4.77816
76 1I0Z OXM 0.004394 0.43507 4.77816
77 9LDB NAD 0.008698 0.41562 4.77816
78 4F8L GAL 0.03724 0.40441 4.82759
79 3E81 SLB 0.003553 0.41142 4.87805
80 3F81 STT 0.01128 0.41537 4.91803
81 1QJC PNS 0.03392 0.40818 5.06329
82 2AJH MET 0.01715 0.42574 5.10204
83 1IYE PGU 0.0007028 0.46205 5.11945
84 4G1V FAD 0.02268 0.43497 5.11945
85 3FPZ AHZ 0.02213 0.42946 5.11945
86 4W6Z ETF 0.0165 0.40071 5.11945
87 2YGN PCF 0.01472 0.4034 5.12821
88 1T8U UAP SGN IDS SGN 0.02057 0.40704 5.14706
89 4DL8 UMP AF3 PO4 0.008617 0.40096 5.17241
90 4JCA CIT 0.03131 0.40072 5.38922
91 1D8C GLV 0.01808 0.4186 5.46075
92 1OMZ UD2 0.0216 0.4106 5.46075
93 1YOA FMN 0.02359 0.41504 5.66038
94 1I2B UPG 0.01 0.43354 5.80205
95 1I2B NAD 0.01 0.43354 5.80205
96 1I2B USQ 0.01 0.43354 5.80205
97 1T0S BML 0.005193 0.42387 5.81395
98 3S9K CIT 0.02257 0.41581 5.9322
99 2YC5 6BC 0.006593 0.42548 6.14035
100 4M5P MLA 0.009559 0.42684 6.14334
101 4M5P 23W 0.005136 0.42409 6.14334
102 2FPU HSO 0.0003288 0.40655 6.25
103 3DCM SAM 0.007516 0.40336 6.25
104 1B74 DGN 0.01523 0.40232 6.29921
105 4USQ FAD 0.02141 0.40224 6.48464
106 1YBH FAD 0.01232 0.4178 6.82594
107 4A6D SAM 0.004221 0.41348 6.82594
108 3AJ4 SEP 0.01829 0.42716 7.14286
109 3IT7 TLA 0.04763 0.4115 7.14286
110 2HBL AMP 0.01159 0.45179 7.16724
111 1FIQ FAD 0.007117 0.42292 7.16724
112 4ZGR NGA GAL 0.0000554 0.56356 7.28745
113 1H8G CHT 0.003427 0.45952 7.36842
114 1O9U ADZ 0.004971 0.43249 7.50853
115 3O03 NAP 0.009379 0.43625 7.56014
116 1QD0 RR6 0.0005182 0.41458 7.8125
117 1KOL NAD 0.01006 0.41861 7.84983
118 2OYS FMN 0.007227 0.40583 7.85124
119 2HMT NAI 0.03182 0.40621 8.33333
120 1OGD RIP 0.00368 0.40516 8.39695
121 4KQI RBZ 0.00565 0.4236 8.53242
122 4KQI NIO 0.00565 0.4236 8.53242
123 1RZM E4P 0.004549 0.41944 8.53242
124 1QF5 GDP 0.01873 0.41664 8.53242
125 1QF5 RPL 0.01873 0.41664 8.53242
126 1YRO UDP 0.04176 0.41016 8.94309
127 3DDC GNP 0.01198 0.40311 9.03614
128 3WCS MAN NAG GAL 0.001868 0.40173 9.05512
129 1L1Q 9DA 0.007443 0.40353 9.13978
130 2BZ1 TAU 0.003562 0.45863 9.18367
131 1F74 NAY 0.00502 0.40444 9.21502
132 2NX1 PEP 0.01634 0.40019 9.3633
133 2XDQ MGX 0.008241 0.42193 9.55631
134 3WE0 FAD 0.02687 0.40635 9.55631
135 4EXO PYR 0.006935 0.41809 9.58904
136 1YAG ATP 0.008113 0.4071 9.6
137 1UY4 XYP XYP XYP XYP 0.02125 0.40987 9.65517
138 1FWV SGA MAG FUC 0.04516 0.40065 9.70149
139 5IDB BMA 0.01828 0.41318 9.85915
140 5IDB MAN 0.01828 0.41318 9.85915
141 4KCF FMN 0.003846 0.40439 10.1322
142 4OUJ LBT 0.0000137 0.62021 10.2389
143 2IMP NAI 0.02549 0.42653 10.5802
144 4LWM MHO 0.01495 0.40741 10.5991
145 4LO2 GAL BGC 0.00001918 0.60544 10.9215
146 2CKM AA7 0.01719 0.41327 10.9215
147 2G30 ALA ALA PHE 0.004472 0.44709 11.2403
148 4DQ2 BTX 0.004503 0.42513 11.2628
149 1V2X SAM 0.008891 0.40041 11.8557
150 4NTD FAD 0.01583 0.41204 12.628
151 1DL7 NCH 0.0009517 0.48893 12.844
152 3BIB PSF 0.0232 0.40164 12.931
153 1JUV NDP 0.01165 0.40502 12.9534
154 1OLS TDP 0.02148 0.41155 13.3106
155 1QH9 LAC 0.0003815 0.45864 13.7931
156 4MDB RLT 0.01135 0.43424 15.1111
157 4BMO FMN 0.002245 0.43334 16.3823
158 2D24 XYS XYS 0.0001931 0.53029 17.0648
159 1H2M OGA 0.0087 0.401 17.3077
160 1NU4 MLA 0.01979 0.41912 17.5258
161 1UO4 PIH 0.003981 0.44601 17.6471
162 1UO5 PIH 0.01581 0.42431 17.6471
163 2VUZ NAG BMA NAG MAN MAN NAG NAG 0.02263 0.41855 18.6047
164 3H86 AP5 0.02834 0.41178 22.9167
165 4G9N NGA 0.00006624 0.56091 27.2727
166 4OWK NGA 0.00007305 0.5649 36.2319
Pocket No.: 3; Query (leader) PDB : 5D63; Ligand: FUC GLA GLA; Similar sites found: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 3) in the query (biounit: 5d63.bio1) has 12 residues
No: Leader PDB Ligand P-value (APoc) PS_Score (APoc) Sequence Similarity
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