Receptor
PDB id Resolution Class Description Source Keywords
2HYR 1.51 Å NON-ENZYME: OTHER CRYSTAL STRUCTURE OF A COMPLEX OF GRIFFITHSIN WITH MALTOSE GRIFFITHSIA GRIFFITHSIN LECTINS DOMAIN SWAPPING MANNOSE BINDING HIVSUGAR BINDING PROTEIN
Ref.: CRYSTALLOGRAPHIC, THERMODYNAMIC, AND MOLECULAR MODE STUDIES OF THE MODE OF BINDING OF OLIGOSACCHARIDES POTENT ANTIVIRAL PROTEIN GRIFFITHSIN. PROTEINS V. 67 661 2007
Ligand
Ligand Chain:Residue Validity Ligand Warnings Binding Data NGL Viewer Molecular Weight (Da) Formula SMILES
BGC GLC A:122;
A:124;
A:126;
B:122;
B:124;
B:126;
Valid;
Valid;
Valid;
Valid;
Valid;
Valid;
none;
none;
none;
none;
none;
none;
Kd = 394 uM
342.297 n/a O(C1O...
EDO A:601;
A:603;
B:602;
Invalid;
Invalid;
Invalid;
none;
none;
none;
submit data
62.068 C2 H6 O2 C(CO)...
MG A:501;
A:502;
Invalid;
Invalid;
none;
none;
submit data
24.305 Mg [Mg+2...
SO4 A:401;
A:402;
B:403;
Invalid;
Invalid;
Invalid;
none;
none;
none;
submit data
96.063 O4 S [O-]S...
View in 3D viewer
90% Homology Family
Leader
PDB id Resolution Class Description Source Keywords
2HYR 1.51 Å NON-ENZYME: OTHER CRYSTAL STRUCTURE OF A COMPLEX OF GRIFFITHSIN WITH MALTOSE GRIFFITHSIA GRIFFITHSIN LECTINS DOMAIN SWAPPING MANNOSE BINDING HIVSUGAR BINDING PROTEIN
Ref.: CRYSTALLOGRAPHIC, THERMODYNAMIC, AND MOLECULAR MODE STUDIES OF THE MODE OF BINDING OF OLIGOSACCHARIDES POTENT ANTIVIRAL PROTEIN GRIFFITHSIN. PROTEINS V. 67 661 2007
Members (1)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 1256 families.
1 2HYR Kd = 394 uM BGC GLC n/a n/a
70% Homology Family (1)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 1068 families.
1 2HYR Kd = 394 uM BGC GLC n/a n/a
50% Homology Family (1)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 922 families.
1 2HYR Kd = 394 uM BGC GLC n/a n/a
Polypharmacology
Similar Ligands
Ligand no: 1; Ligand: BGC GLC; Similar ligands found: 339
No: Ligand ECFP6 Tc MDL keys Tc
1 LBT 1 1
2 GLC BGC 1 1
3 MAL MAL 1 0.970588
4 BGC GLC 1 1
5 CBI 1 1
6 GAL BGC 1 1
7 CBK 1 1
8 BGC BMA 1 1
9 N9S 1 1
10 GLA GLA 1 1
11 BGC GAL 1 1
12 GAL GLC 1 1
13 GLC GAL 1 1
14 BMA BMA 1 1
15 GLA GAL 1 1
16 BMA GAL 1 1
17 LAT 1 1
18 MAB 1 1
19 MAL 1 1
20 B2G 1 1
21 CEX 0.909091 1
22 BGC GLC GLC GLC GLC 0.909091 1
23 GLC GLC GLC GLC GLC 0.909091 1
24 CTR 0.909091 1
25 MTT 0.909091 1
26 CE5 0.909091 1
27 BMA BMA BMA BMA BMA 0.909091 1
28 CTT 0.909091 1
29 CT3 0.909091 1
30 GLC GLC GLC GLC GLC GLC GLC 0.909091 1
31 BGC GLC GLC GLC GLC GLC GLC 0.909091 1
32 BGC BGC BGC GLC 0.909091 1
33 CEY 0.909091 1
34 MAN MAN BMA BMA BMA BMA 0.909091 1
35 BMA BMA BMA 0.909091 1
36 B4G 0.909091 1
37 BGC BGC BGC BGC BGC BGC BGC BGC BGC 0.909091 1
38 GLC GAL GAL 0.909091 1
39 GLA GAL GLC 0.909091 1
40 GAL GAL GAL 0.909091 1
41 MAN BMA BMA BMA BMA 0.909091 1
42 MLR 0.909091 1
43 CE8 0.909091 1
44 MT7 0.909091 1
45 CE6 0.909091 1
46 GLC BGC BGC BGC BGC BGC 0.909091 1
47 GLC GLC BGC 0.909091 1
48 GLC BGC BGC 0.909091 1
49 GLC BGC GLC 0.909091 1
50 BMA MAN BMA 0.909091 1
51 GLC GLC BGC GLC GLC GLC GLC 0.909091 1
52 BGC GLC GLC 0.909091 1
53 BGC GLC GLC GLC 0.909091 1
54 GLC GLC GLC GLC GLC GLC GLC GLC GLC 0.909091 1
55 DXI 0.909091 1
56 BMA BMA BMA BMA BMA BMA 0.909091 1
57 GLC GLC GLC GLC GLC GLC GLC GLC 0.909091 1
58 GLC BGC BGC BGC BGC 0.909091 1
59 BGC BGC BGC BGC BGC BGC 0.909091 1
60 MAN BMA BMA 0.909091 1
61 MAN BMA BMA BMA BMA BMA 0.833333 0.970588
62 BMA BMA BMA BMA BMA BMA MAN 0.833333 0.970588
63 GLA GAL GAL 0.816327 1
64 GLA GAL BGC 0.816327 1
65 BGC BGC BGC BGC 0.754717 1
66 BGC BGC BGC BGC BGC BGC BGC BGC 0.754717 1
67 BMA BMA GLA BMA BMA 0.689655 1
68 LAT GLA 0.680851 1
69 GLC GLC GLC BGC 0.672414 1
70 BGC BGC GLC 0.660377 1
71 U63 0.647059 0.891892
72 DR5 0.64 0.942857
73 MMA MAN 0.64 0.942857
74 GLA EGA 0.634615 0.942857
75 BMA BMA MAN 0.615385 0.970588
76 GAL FUC 0.615385 0.941176
77 BGC BGC 0.612245 1
78 MAN MAN 0.612245 1
79 2M4 0.612245 1
80 GLC GAL FUC 0.610169 0.970588
81 GLC GLC GLC GLC GLC GLC 0.610169 1
82 FUC LAT 0.610169 0.970588
83 FUC GAL GLC 0.610169 0.970588
84 BGC GAL FUC 0.610169 0.970588
85 LAT FUC 0.610169 0.970588
86 BGC GLA GAL FUC 0.609375 0.970588
87 GAL NAG GAL BGC 0.606061 0.733333
88 LAT NAG GAL 0.606061 0.733333
89 GLC GLC BGC XYS BGC XYS 0.606061 0.942857
90 BGC GAL NAG GAL 0.606061 0.733333
91 MAN GLC 0.6 1
92 LB2 0.6 1
93 M3M 0.6 1
94 SGA BGC 0.6 0.702128
95 MAL EDO 0.592593 0.942857
96 BGC BGC BGC XYS GAL 0.588235 0.942857
97 XYS BGC BGC XYS BGC XYS BGC BGC BGC 0.588235 0.942857
98 GLC GAL NAG GAL 0.588235 0.733333
99 BGC BGC BGC XYS BGC BGC 0.588235 0.942857
100 XYS BGC BGC BGC BGC XYS BGC BGC BGC 0.588235 0.942857
101 NGA GAL BGC 0.587302 0.733333
102 TRE 0.581395 1
103 ABD 0.57971 0.75
104 NDG GAL 0.578947 0.733333
105 GAL NDG 0.578947 0.733333
106 5GO 0.578947 0.66
107 NLC 0.578947 0.733333
108 DEL 0.574074 0.970588
109 GAL NGA GLA BGC GAL 0.571429 0.733333
110 MVP 0.571429 0.733333
111 GAL BGC BGC XYS 0.569231 0.942857
112 GLC GLC FRU 0.569231 0.868421
113 BMA MAN 0.566038 0.914286
114 GLC GLC XYP 0.557377 1
115 BGC BGC XYS BGC 0.552239 0.942857
116 NAG GAL BGC 0.552239 0.733333
117 GLA GAL BGC 5VQ 0.551724 0.891892
118 G2F BGC BGC BGC BGC BGC 0.55 0.868421
119 GLA MBG 0.54902 0.942857
120 GLC ACI GLD GLC 0.547945 0.785714
121 GLC G6D ACI GLC 0.547945 0.785714
122 GLC ACI G6D BGC 0.547945 0.785714
123 GLC G6D ADH GLC 0.547945 0.785714
124 GLC BGC BGC BGC 0.545455 1
125 BGC BGC BGC ASO BGC BGC ASO 0.545455 1
126 GLC BGC BGC BGC BGC BGC BGC 0.545455 1
127 BGC BGC BGC 0.545455 1
128 BGC BGC BGC GLC BGC BGC 0.545455 1
129 BGC BGC BGC BGC BGC 0.545455 1
130 MAN MAN BMA 0.535714 1
131 NGA GLA GAL BGC 0.535211 0.733333
132 BMA MAN MAN 0.534483 1
133 GAL BGC BGC BGC XYS BGC XYS 0.533333 0.942857
134 BGC BGC BGC XYS BGC XYS GAL 0.533333 0.942857
135 GLC BGC BGC XYS BGC XYS XYS 0.528571 0.942857
136 BGC BGC BGC XYS BGC XYS XYS 0.528571 0.942857
137 BGC BGC XYS BGC XYS BGC XYS 0.528571 0.942857
138 GLA GAL GLC NBU 0.52459 0.846154
139 FUC BGC GAL 0.52459 0.970588
140 GLC ACI GLD GAL 0.519481 0.733333
141 GLC ACI G6D GLC 0.519481 0.733333
142 GLC GLC G6D ACI GLC GLC GLC 0.519481 0.785714
143 GLC BGC BGC BGC XYS BGC XYS XYS 0.513514 0.916667
144 DOM 0.509091 0.942857
145 GAL GAL SO4 0.508197 0.702128
146 DMU 0.507937 0.785714
147 LMT 0.507937 0.785714
148 LMU 0.507937 0.785714
149 G2I 0.507937 0.767442
150 G3I 0.507937 0.767442
151 OXZ BGC BGC 0.507937 0.6875
152 UMQ 0.507937 0.785714
153 GLC AGL GLC HMC 0.506329 0.717391
154 BGC BGC XYS BGC GAL XYS BGC XYS GAL 0.506329 0.942857
155 GLC BGC BGC XYS BGC XYS XYS GAL GAL 0.506329 0.942857
156 GAL BGC BGC BGC XYS XYS 0.506329 0.942857
157 GAL XYS XYS BGC BGC BGC XYS GAL BGC 0.506329 0.942857
158 GLC BGC BGC XYS BGC XYS XYS GAL 0.506329 0.942857
159 NAG GAL GAL 0.5 0.733333
160 SOR GLC GLC 0.5 0.970588
161 GAL GAL GLC EMB MEC 0.5 0.622642
162 FMO 0.5 0.868421
163 MAN BMA NAG 0.5 0.733333
164 GLA GAL NAG 0.5 0.733333
165 8VZ 0.5 0.673469
166 GLC GLC ACI G6D GLC GLC 0.493827 0.733333
167 GLC GLC AGL HMC GLC 0.493827 0.733333
168 GLC GLC DAF BGC 0.493827 0.733333
169 AAO 0.493827 0.733333
170 ARE 0.493827 0.733333
171 ACR GLC GLC GLC 0.493827 0.733333
172 GLC GLC XYS 0.492308 0.970588
173 CGC 0.491525 0.941176
174 5QP 0.491228 0.885714
175 MDM 0.490909 0.942857
176 RZM 0.490909 0.688889
177 M13 0.490909 0.942857
178 GAL MBG 0.490909 0.942857
179 GLC GLC GLC G6D ADH GLC 0.487805 0.6875
180 BGC BGC G2F SHG 0.485714 0.846154
181 MAN NAG GAL 0.485294 0.733333
182 GAL NAG MAN 0.485294 0.733333
183 6UZ 0.484848 0.846154
184 SOR GLC GLC GLC 0.484848 0.970588
185 LAG 0.484848 0.6
186 MAN MNM 0.482759 0.75
187 GAL BGC NAG GAL 0.478873 0.733333
188 10M 0.477612 0.733333
189 GTM BGC BGC 0.477612 0.868421
190 MAN MAN MAN MAN 0.476923 1
191 MAN MAN BMA MAN 0.476923 1
192 GLA GAL NAG FUC GAL GLC 0.47619 0.717391
193 NAG BMA 0.47619 0.653061
194 GAL NGA 0.47541 0.733333
195 GAL A2G 0.47541 0.733333
196 A2G GAL 0.47541 0.733333
197 BMA GLA 0.472727 1
198 LAK 0.472727 1
199 GAL GAL 0.472727 1
200 GLA GLC 0.472727 1
201 MLB 0.472727 1
202 GLA BMA 0.472727 1
203 BGC GLA 0.472727 1
204 MAN BMA 0.472727 1
205 GLA BGC 0.472727 1
206 NPJ 0.470588 0.622642
207 FUC GAL NAG GAL BGC 0.469136 0.717391
208 MAN MAN MAN GLC 0.46875 1
209 ABL 0.466667 0.702128
210 BMA FRU 0.465517 0.842105
211 FRU GAL 0.465517 0.842105
212 NOY BGC 0.465517 0.75
213 TM6 0.463768 0.916667
214 BGC SGC BGC SGC BGC SGC BGC SGC 0.463768 0.916667
215 LSE 0.462687 0.6875
216 GLA GLA FUC 0.460317 0.970588
217 FUC GAL GLA 0.460317 0.970588
218 GAL GAL FUC 0.460317 0.970588
219 GLA GAL FUC 0.460317 0.970588
220 FUC GLA GLA 0.460317 0.970588
221 DAF BGC 0.458333 0.785714
222 DAF GLC 0.458333 0.785714
223 IFM BMA 0.457627 0.744186
224 BGC OXZ 0.457627 0.666667
225 IFM BGC 0.457627 0.744186
226 BMA IFM 0.457627 0.744186
227 9MR 0.457627 0.744186
228 GLO GLC GLC 0.457143 0.942857
229 RCB 0.457143 0.622642
230 GLC GLC GLC GLC GLC BGC 0.45614 1
231 GLC GLC GLC 0.45614 1
232 GLC GLC GLC GLC BGC 0.45614 1
233 MAN MAN MAN 0.45614 1
234 GLC 0.454545 0.848485
235 BMA 0.454545 0.848485
236 GXL 0.454545 0.848485
237 WOO 0.454545 0.848485
238 GIV 0.454545 0.848485
239 GAL 0.454545 0.848485
240 MAN 0.454545 0.848485
241 BGC 0.454545 0.848485
242 ALL 0.454545 0.848485
243 GLA 0.454545 0.848485
244 GLC GLC GLC GLC 0.453125 1
245 MGL SGC GLC GLC 0.450704 0.868421
246 CM5 0.450704 0.891892
247 MAN MAN MAN BMA MAN 0.450704 1
248 BGC BGC SGC MGL 0.450704 0.868421
249 GLC DMJ 0.45 0.727273
250 A2G GAL BGC FUC 0.45 0.717391
251 GLC GLC GLC PO4 SGC GLC 0.45 0.673469
252 NOJ GLC 0.45 0.727273
253 PA1 GCS 0.448276 0.804878
254 GCS GCS 0.448276 0.804878
255 M5S 0.447761 1
256 MAN BMA MAN MAN MAN 0.447761 1
257 GLC GLC XYS XYS 0.447761 0.914286
258 DAF BGC GLC 0.447368 0.785714
259 TXT 0.447368 0.767442
260 GAC 0.447368 0.767442
261 DAF GLC GLC 0.447368 0.785714
262 ACI GLD GLC GAL 0.447368 0.785714
263 GLC GAL NAG GAL FUC FUC 0.447059 0.702128
264 BGC GAL NAG GAL FUC FUC 0.447059 0.702128
265 GAL NAG GAL NAG GAL NAG 0.445946 0.673469
266 NAG GAL GAL NAG GAL 0.445946 0.6875
267 NAG GAL GAL NAG 0.445946 0.6875
268 MA4 0.444444 0.891892
269 QV4 0.444444 0.733333
270 GLO GLC GLC GLC 0.444444 0.942857
271 MAN DGO 0.440678 0.914286
272 3SA 0.44 0.733333
273 Z6J 0.439024 0.742857
274 AHR 0.439024 0.742857
275 32O 0.439024 0.742857
276 FUB 0.439024 0.742857
277 RIB 0.439024 0.742857
278 T6P 0.438596 0.767442
279 GYP 0.4375 0.857143
280 AMG 0.4375 0.857143
281 MMA 0.4375 0.857143
282 MBG 0.4375 0.857143
283 4MU BGC BGC 0.434211 0.767442
284 ISX 0.433333 0.761905
285 MAN 7D1 0.431034 0.888889
286 QPS 0.43038 0.733333
287 ACR 0.43038 0.733333
288 4MU BGC BGC BGC BGC 0.428571 0.767442
289 GAL MGC 0.428571 0.702128
290 GAL NGA A2G 0.426471 0.673469
291 FUC NAG GAL 0.422535 0.717391
292 FUC NDG GAL 0.422535 0.717391
293 GAL NAG FUC 0.422535 0.717391
294 GAL NDG FUC 0.422535 0.717391
295 KHO 0.421053 0.888889
296 HMC AGL GLC 0.421053 0.717391
297 GCS GCS GCS GCS GCS 0.419355 0.804878
298 GCS GCS GCS GCS GCS GCS 0.419355 0.804878
299 GCS GCS GCS 0.419355 0.804878
300 GAL NAG GAL 0.418919 0.702128
301 GAL NGT 0.41791 0.66
302 P3M 0.41791 0.767442
303 NGT GAL 0.41791 0.66
304 ACR GLC GLC GLC GLC 0.417722 0.733333
305 ACR GLC 0.417722 0.733333
306 A2G GAL NAG FUC GAL GLC 0.417582 0.673469
307 GLC GAL NAG GAL FUC A2G 0.417582 0.673469
308 TUR 0.416667 0.842105
309 BTU 0.416667 0.842105
310 GLA MAN ABE 0.414286 0.916667
311 NAG NDG BMA 0.413333 0.634615
312 NAG NAG BMA 0.413333 0.634615
313 AHR AHR AHR 0.410714 0.857143
314 FUB AHR AHR 0.410714 0.857143
315 GLF B8D 0.409836 0.775
316 VAM 0.409836 0.868421
317 ACI G6D GLC ACI G6D BGC 0.409639 0.75
318 BGC GLC AC1 GLC GLC GLC AC1 0.409639 0.75
319 AC1 GLC AC1 BGC 0.409639 0.75
320 DAF GLC DAF GLC GLC 0.409639 0.75
321 ACI GLD GLC GLC GLC ACI GLD GLC GAL 0.409639 0.75
322 ACI GLD GLC ACI G6D BGC 0.409639 0.75
323 MAN MMA MAN 0.409091 0.942857
324 AHR AHR 0.407407 0.857143
325 FUB AHR 0.407407 0.857143
326 NAG BMA MAN MAN MAN MAN 0.407407 0.733333
327 G6D GLC ACI GLD GLC ACI GLD GLC BGC 0.406977 0.680851
328 4U0 0.406593 0.66
329 GLA MAN RAM ABE 0.405063 0.891892
330 BGC BGC SSG PIH 0.405063 0.767442
331 M1P 0.403846 0.697674
332 GL1 0.403846 0.697674
333 XGP 0.403846 0.697674
334 G1P 0.403846 0.697674
335 MAN IFM 0.403226 0.761905
336 GLC IFM 0.403226 0.761905
337 XZZ BGC BGC 0.402439 0.702128
338 ACG 0.402299 0.695652
339 FUC GAL 0.4 0.941176
Similar Binding Sites (Proteins are less than 50% similar to leader)
Pocket No.: 1; Query (leader) PDB : 2HYR; Ligand: BGC GLC; Similar sites found: 172
This union binding pocket(no: 1) in the query (biounit: 2hyr.bio1) has 8 residues
No: Leader PDB Ligand P-value (APoc) PS_Score (APoc) Sequence Similarity
1 2BQP GLC 0.00000008014 0.63134 None
2 1LES GLC FRU 0.0000001566 0.59607 None
3 1OFS SUC 0.0000001123 0.52819 None
4 2HMT NAI 0.0118 0.41763 None
5 1N2X SAM 0.03032 0.40514 None
6 4B5P ACO 0.03778 0.4043 None
7 3P8N L4T 0.02087 0.41628 1.63934
8 2CVQ NDP 0.008749 0.41383 1.63934
9 2JE7 XMM 0.000001789 0.54059 2.45902
10 3GD4 FAD 0.0214 0.4142 2.45902
11 16PK BIS 0.01594 0.4225 4.09836
12 3TKY SAH 0.006318 0.42009 4.09836
13 5BUK FAD 0.04968 0.41948 4.09836
14 2V3B FAD 0.01928 0.41933 4.09836
15 3KRR DQX 0.04792 0.41654 4.09836
16 1SOW NAD 0.02514 0.41189 4.09836
17 2W9S NDP 0.03722 0.40199 4.09836
18 3VPH NAD 0.01383 0.44766 4.19355
19 3P3G UKW 0.01534 0.43818 4.91803
20 3P3G 3P3 0.01534 0.43818 4.91803
21 4ZGS NAD 0.0156 0.43504 4.91803
22 1A5Z NAD 0.01477 0.43371 4.91803
23 2PUL ACP 0.004977 0.43292 4.91803
24 1ZEM NAD 0.007684 0.43272 4.91803
25 3KLJ FAD 0.01645 0.425 4.91803
26 4GKY MAN 0.0008101 0.4187 4.91803
27 4EMI FAD 0.04095 0.40743 4.91803
28 2XVF FAD 0.008641 0.4025 4.91803
29 2Q3R FMN 0.02245 0.40188 4.91803
30 4O33 3PG 0.007636 0.42501 5.7377
31 4O33 TZN 0.007636 0.42501 5.7377
32 3C6K MTA 0.01771 0.41848 5.7377
33 3C6K SPD 0.01771 0.41848 5.7377
34 1VPE ANP 0.007372 0.41689 5.7377
35 4HKP TKW 0.01863 0.41335 5.7377
36 2XVE FAD 0.01354 0.41285 5.7377
37 3CGB FAD 0.02909 0.41261 5.7377
38 4U36 TNR 0.0072 0.40991 5.7377
39 3QV1 NAD 0.0194 0.40403 5.7377
40 4L77 CNL 0.007023 0.40076 5.7377
41 2PHU MAN MAN 0.00000003977 0.66959 6.55738
42 1Q8O MAN MMA 0.0000000648 0.65388 6.55738
43 1Q8V MAN MAN MAN 0.00000009386 0.64734 6.55738
44 2GNM MAN 0.00000003429 0.64644 6.55738
45 1Q8V MAN MAN 0.00000006971 0.64448 6.55738
46 2PHU MAN MAN MAN BMA MAN 0.000000169 0.63945 6.55738
47 2PHF MAN MAN BMA MAN 0.0000001635 0.63556 6.55738
48 2PHX MAN MAN MAN MAN 0.0000001469 0.63306 6.55738
49 2PHF MAN MAN 0.0000001369 0.632 6.55738
50 1Q8P MAN MMA 0.0000001438 0.63082 6.55738
51 2AUY NAG MAN MMA 0.0000002472 0.62967 6.55738
52 2GNB MAN 0.00000003886 0.62864 6.55738
53 3ZYR NAG NAG BMA MAN MAN NAG NAG 0.0000006617 0.62566 6.55738
54 2GN3 MAN 0.0000000325 0.62496 6.55738
55 2AR6 NAG MAN MAN MAN NAG 0.000000494 0.62428 6.55738
56 3ZYR ASN NAG NAG BMA MAN MAN NAG NAG 0.0000007056 0.62286 6.55738
57 2GN3 MMA 0.00000004824 0.61438 6.55738
58 2AR6 NAG MAN 0.0000004692 0.61368 6.55738
59 2GMM MAN MAN 0.00000002072 0.5797 6.55738
60 1UKG MMA 0.000002586 0.56753 6.55738
61 2PHX MAN MAN 0.000004302 0.56712 6.55738
62 1Q8Q MAN MMA 0.000004768 0.55509 6.55738
63 2GND MAN 0.00000005515 0.54092 6.55738
64 2PHT MAN MAN MAN 0.0000001077 0.51347 6.55738
65 2GND MAN MMA 0.0000001287 0.4958 6.55738
66 2PHW MAN MAN 0.0000001431 0.49446 6.55738
67 2PHR MAN MAN 0.0000001476 0.49404 6.55738
68 2PHR MAN MAN BMA MAN 0.0000001383 0.48076 6.55738
69 1Q8S MAN MMA 0.000004118 0.47774 6.55738
70 2CUN 3PG 0.0001896 0.46793 6.55738
71 2PHT MAN MAN MAN BMA MAN 0.000000195 0.46428 6.55738
72 2PHW MAN MAN MAN BMA MAN MAN MAN 0.000000215 0.46322 6.55738
73 2GMP NAG MAN 0.00001307 0.46067 6.55738
74 4USQ FAD 0.01727 0.45496 6.55738
75 1LOB MMA 0.000001482 0.45468 6.55738
76 5A1S FLC 0.0004513 0.4481 6.55738
77 5L4S 6KX 0.01203 0.43711 6.55738
78 5L4S NAP 0.01203 0.43711 6.55738
79 1OFD FMN 0.01007 0.42725 6.55738
80 1OFD AKG 0.01383 0.41773 6.55738
81 1WPQ NAD 0.02013 0.40825 6.55738
82 1LOF MAN BMA NAG NAG MAN NAG GAL GAL 0.00002113 0.40039 6.55738
83 1HQL GLA MBG 0.00001143 0.51248 7.37705
84 4RPL 3UC 0.01055 0.45414 7.37705
85 1N5D NDP 0.008426 0.44417 7.37705
86 1BXG NAD 0.003156 0.44136 7.37705
87 4RPL FAD 0.03431 0.43668 7.37705
88 4D42 W0I 0.02418 0.42566 7.37705
89 4D42 NAP 0.02418 0.42566 7.37705
90 1T3Q FAD 0.03407 0.41161 7.37705
91 2D7I NGA 0.01137 0.40159 7.37705
92 4M00 SUC 0.0000009801 0.60309 8.19672
93 1AE1 NAP 0.007324 0.45329 8.19672
94 5DEX 5E0 0.005428 0.43976 8.19672
95 3QWI CUE 0.02493 0.40831 8.19672
96 3QWI NAP 0.01818 0.40831 8.19672
97 1F76 FMN 0.01349 0.40447 8.19672
98 2ABJ CBC 0.028 0.40018 8.19672
99 4AP3 NAP 0.004309 0.47485 9.01639
100 1YKF NAP 0.01129 0.45095 9.01639
101 1WMA AB3 0.007839 0.44792 9.01639
102 2F5Z FAD 0.009035 0.43855 9.01639
103 5GM9 CBK 0.005375 0.43587 9.01639
104 2IVN ANP 0.00882 0.42441 9.01639
105 4POO SAM 0.01848 0.41589 9.01639
106 3D2M COA 0.02275 0.41051 9.01639
107 4PLG NAI 0.03593 0.40613 9.01639
108 1KAO GDP 0.01763 0.40867 9.58084
109 1LYX PGA 0.0009433 0.44778 9.83607
110 1U6R ADP 0.00494 0.44028 9.83607
111 2Q6B HR2 0.02814 0.43097 9.83607
112 3UCL FAD 0.01378 0.43085 9.83607
113 3UCL CYH 0.01378 0.43085 9.83607
114 3UCL NAP 0.01463 0.43085 9.83607
115 2YVJ FAD 0.038 0.4122 10.0917
116 1B8U OAA 0.0107 0.42131 10.3343
117 1B8U NAD 0.006358 0.42131 10.3343
118 1MVQ MMA 0.000001243 0.56673 10.6557
119 1VRP ADP 0.006153 0.42276 10.6557
120 4DQ2 BTX 0.00464 0.42125 10.6557
121 1D4D FAD 0.007155 0.41967 10.6557
122 3OEN GLU 0.001452 0.41886 10.6557
123 1ZK4 NAP 0.02847 0.40136 10.6557
124 2NXW TPP 0.04077 0.41384 11.4754
125 2Q4W FAD 0.01607 0.41244 11.4754
126 4L8V NAP 0.03389 0.41121 11.4754
127 1MHW BP4 CYS DAR TYR PEA 0.0236 0.40911 11.9048
128 5X8G S0N 0.01491 0.42947 12.2951
129 1MO9 KPC 0.03092 0.4236 12.2951
130 2Q1W NAD 0.01125 0.40351 12.2951
131 1EQ2 NAP 0.005342 0.44409 13.1148
132 3RNM FAD 0.0175 0.41629 13.7931
133 4C3Y ANB 0.012 0.42946 13.9344
134 4C3Y FAD 0.0103 0.42946 13.9344
135 1LTH NAD 0.01491 0.40405 13.9344
136 3JQ8 NAP 0.01483 0.40118 13.9344
137 1M15 ADP 0.01385 0.43706 14.7541
138 1M15 ARG 0.01385 0.43706 14.7541
139 2Q7V FAD 0.01248 0.4113 14.7541
140 1I0Z NAI 0.03086 0.40193 14.7541
141 3HDY FDA 0.03969 0.41483 15.5738
142 3HDY FAD 0.04326 0.41106 15.5738
143 3O26 NDP 0.005353 0.44308 17.2131
144 1FL2 FAD 0.03869 0.42385 17.2131
145 3JQ3 ADP 0.004493 0.42202 17.2131
146 1KGQ SCO 0.02685 0.41545 17.2131
147 1KGQ NPI 0.02615 0.41545 17.2131
148 2JK0 ASP 0.002005 0.42006 18.0328
149 2X6T NAP 0.00473 0.45021 18.8525
150 3PT9 SAH 0.02646 0.40325 19.6721
151 2FMD MAN MAN 0.0000002419 0.60098 20.4918
152 1ELI PYC 0.0001046 0.54345 21.3115
153 3ENG CBI 0.005318 0.40426 22.1311
154 1XXR MAN 0.0000000004649 0.68398 23.7705
155 1VBO MAN 0.00000001996 0.61687 24.5902
156 1VBO MAN MAN MAN 0.00000001325 0.59591 24.5902
157 1JOT GAL A2G 0.00004883 0.50713 24.5902
158 5IQD RIO 0.02571 0.40799 24.5902
159 5IQD GNP 0.02481 0.40799 24.5902
160 1C3M MAN MAN 0.0000000004752 0.83118 34.4262
161 1WS5 MMA 0.0000278 0.5296 37.7049
162 1WS4 AMG 0.00002177 0.5262 37.7049
163 1WS4 GYP 0.00002767 0.52163 37.7049
164 1UGY GLA BGC 0.00002664 0.51941 37.7049
165 1KUJ MMA 0.00005024 0.5145 37.7049
166 1UGY GLA GLC 0.00003595 0.5139 37.7049
167 1UGW GAL 0.00004322 0.50712 37.7049
168 1M26 GAL A2G 0.0001154 0.49605 37.7049
169 1JAC AMG 0.0001163 0.4766 37.7049
170 1UGX GAL MGC 0.000008551 0.43101 37.7049
171 1TOQ AMG 0.00005118 0.50512 40.1639
172 2BMZ XLM 0.000000001545 0.43037 48.3607
Pocket No.: 2; Query (leader) PDB : 2HYR; Ligand: BGC GLC; Similar sites found: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 2) in the query (biounit: 2hyr.bio1) has 8 residues
No: Leader PDB Ligand P-value (APoc) PS_Score (APoc) Sequence Similarity
Pocket No.: 3; Query (leader) PDB : 2HYR; Ligand: BGC GLC; Similar sites found: 36
This union binding pocket(no: 3) in the query (biounit: 2hyr.bio1) has 8 residues
No: Leader PDB Ligand P-value (APoc) PS_Score (APoc) Sequence Similarity
1 3RFV NAI 0.03205 0.40757 2.45902
2 3RFV 15L 0.01307 0.40709 2.45902
3 3RG9 NDP 0.03352 0.40124 3.27869
4 4TW7 37K 0.02401 0.40231 4.09836
5 3GDN FAD 0.04635 0.41623 4.91803
6 2B1N LYS ALA SER VAL GLY 0.0228 0.40842 4.91803
7 1H6C SIN 0.04471 0.40435 4.91803
8 3H8C NSZ 0.01521 0.41993 5
9 1RM4 NDP 0.01565 0.40206 5.7377
10 2PWY SAH 0.02217 0.40155 5.7377
11 1YQS BSA 0.01617 0.42117 6.55738
12 2D3S TNR 0.00852 0.41701 6.55738
13 3AI8 HNQ 0.03281 0.40022 7.37705
14 2RGO FAD 0.04225 0.40012 7.37705
15 2VPQ ANP 0.01891 0.41676 8.19672
16 2YY7 NAD 0.02539 0.40999 8.19672
17 4MRT COA 0.01662 0.40713 8.19672
18 2VBU CDP 0.04484 0.40456 8.19672
19 2Y6Q I7T 0.03476 0.41855 9.01639
20 2Y6Q FAD 0.02214 0.41855 9.01639
21 1LDN NAD 0.03709 0.40803 9.01639
22 1NLU IVA PHI TYB 0.009729 0.4037 9.01639
23 3Q9T FAY 0.006938 0.45712 9.83607
24 3GMB FAD 0.01561 0.41019 9.83607
25 4K81 GTP 0.02748 0.40611 9.83607
26 1O94 ADP 0.01405 0.40293 10.6557
27 2VQD AP2 0.01215 0.40855 13.1148
28 3QMN COA 0.01611 0.40704 13.1148
29 1FIQ FAD 0.02469 0.40735 13.9344
30 4CM9 NAP 0.01309 0.40242 13.9344
31 1N62 FAD 0.04744 0.40627 14.7541
32 4EKV BTN 0.01982 0.40343 14.7541
33 3ZEI AWH 0.03 0.41148 19.6721
34 3QDV A2G 0.02152 0.40251 21.3115
35 3QDW A2G 0.022 0.40242 21.3115
36 4J56 FAD 0.02284 0.43296 24.5902
Pocket No.: 4; Query (leader) PDB : 2HYR; Ligand: BGC GLC; Similar sites found: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 4) in the query (biounit: 2hyr.bio1) has 8 residues
No: Leader PDB Ligand P-value (APoc) PS_Score (APoc) Sequence Similarity
Pocket No.: 5; Query (leader) PDB : 2HYR; Ligand: BGC GLC; Similar sites found: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 5) in the query (biounit: 2hyr.bio1) has 8 residues
No: Leader PDB Ligand P-value (APoc) PS_Score (APoc) Sequence Similarity
Pocket No.: 6; Query (leader) PDB : 2HYR; Ligand: BGC GLC; Similar sites found: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 6) in the query (biounit: 2hyr.bio1) has 8 residues
No: Leader PDB Ligand P-value (APoc) PS_Score (APoc) Sequence Similarity
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