Receptor
PDB id Resolution Class Description Source Keywords
2HFN 1.8 Å NON-ENZYME: SIGNAL_HORMONE CRYSTAL STRUCTURES OF THE SYNECHOCYSTIS PHOTORECEPTOR SLR169 DISTINCT STRUCTURAL STATES RELATED TO SIGNALING SYNECHOCYSTIS SP. BETA SHEET FERREDOXIN-LIKE FOLD FLAVIN BINDING PROTEIN PHOTORECEPTOR ELECTRON TRANSPORT
Ref.: CRYSTAL STRUCTURES OF THE SYNECHOCYSTIS PHOTORECEPT SLR1694 REVEAL DISTINCT STRUCTURAL STATES RELATED T SIGNALING. BIOCHEMISTRY V. 45 12687 2006
Ligand
Ligand Chain:Residue Validity Ligand Warnings Binding Data NGL Viewer Molecular Weight (Da) Formula SMILES
FMN A:201;
B:201;
C:201;
D:201;
E:201;
F:201;
G:201;
H:201;
I:201;
J:201;
Valid;
Valid;
Valid;
Valid;
Valid;
Valid;
Valid;
Valid;
Valid;
Valid;
none;
none;
none;
none;
none;
none;
none;
none;
none;
none;
submit data
456.344 C17 H21 N4 O9 P Cc1cc...
View in 3D viewer
90% Homology Family
Leader
PDB id Resolution Class Description Source Keywords
2HFN 1.8 Å NON-ENZYME: SIGNAL_HORMONE CRYSTAL STRUCTURES OF THE SYNECHOCYSTIS PHOTORECEPTOR SLR169 DISTINCT STRUCTURAL STATES RELATED TO SIGNALING SYNECHOCYSTIS SP. BETA SHEET FERREDOXIN-LIKE FOLD FLAVIN BINDING PROTEIN PHOTORECEPTOR ELECTRON TRANSPORT
Ref.: CRYSTAL STRUCTURES OF THE SYNECHOCYSTIS PHOTORECEPT SLR1694 REVEAL DISTINCT STRUCTURAL STATES RELATED T SIGNALING. BIOCHEMISTRY V. 45 12687 2006
Members (3)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 286 families.
1 2HFN - FMN C17 H21 N4 O9 P Cc1cc2c(cc....
2 3MZI - FMN C17 H21 N4 O9 P Cc1cc2c(cc....
3 2HFO - FMN C17 H21 N4 O9 P Cc1cc2c(cc....
70% Homology Family (3)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 209 families.
1 2HFN - FMN C17 H21 N4 O9 P Cc1cc2c(cc....
2 3MZI - FMN C17 H21 N4 O9 P Cc1cc2c(cc....
3 2HFO - FMN C17 H21 N4 O9 P Cc1cc2c(cc....
50% Homology Family (4)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 149 families.
1 1X0P - FAD C27 H33 N9 O15 P2 Cc1cc2c(cc....
2 2HFN - FMN C17 H21 N4 O9 P Cc1cc2c(cc....
3 3MZI - FMN C17 H21 N4 O9 P Cc1cc2c(cc....
4 2HFO - FMN C17 H21 N4 O9 P Cc1cc2c(cc....
Polypharmacology
Similar Ligands
Ligand no: 1; Ligand: FMN; Similar ligands found: 15
No: Ligand ECFP6 Tc MDL keys Tc
1 FMN 1 1
2 RBF 0.75641 0.876712
3 RS3 0.571429 0.831169
4 FAD 0.543307 0.876543
5 FAS 0.543307 0.876543
6 FAE 0.539062 0.865854
7 LFN 0.475 0.643836
8 C3F 0.473684 0.74359
9 CF4 0.463918 0.734177
10 FAY 0.446043 0.864198
11 FNR 0.444444 0.909091
12 RFL 0.442857 0.845238
13 4LS 0.411215 0.875
14 1VY 0.406593 0.769231
15 DLZ 0.404494 0.782051
Similar Binding Sites (Proteins are less than 50% similar to leader)
Pocket No.: 1; Query (leader) PDB : 2HFN; Ligand: FMN; Similar sites found with APoc: 7
This union binding pocket(no: 1) in the query (biounit: 2hfn.bio1) has 18 residues
No: Leader PDB Ligand Sequence Similarity
1 5N26 73M 10.4575
2 2BYC FMN 30.6569
3 3GFZ FMN 35.9477
4 4YUS FMN 37.9085
5 2IYG FMN 38.7097
6 5MBC FMN 41.8301
7 1YRX FMN 42.9752
Pocket No.: 2; Query (leader) PDB : 2HFN; Ligand: FMN; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 2) in the query (biounit: 2hfn.bio1) has 19 residues
No: Leader PDB Ligand Sequence Similarity
Pocket No.: 3; Query (leader) PDB : 2HFN; Ligand: FMN; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 3) in the query (biounit: 2hfn.bio1) has 18 residues
No: Leader PDB Ligand Sequence Similarity
Pocket No.: 4; Query (leader) PDB : 2HFN; Ligand: FMN; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 4) in the query (biounit: 2hfn.bio1) has 18 residues
No: Leader PDB Ligand Sequence Similarity
Pocket No.: 5; Query (leader) PDB : 2HFN; Ligand: FMN; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 5) in the query (biounit: 2hfn.bio1) has 18 residues
No: Leader PDB Ligand Sequence Similarity
Pocket No.: 6; Query (leader) PDB : 2HFN; Ligand: FMN; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 6) in the query (biounit: 2hfn.bio1) has 20 residues
No: Leader PDB Ligand Sequence Similarity
Pocket No.: 7; Query (leader) PDB : 2HFN; Ligand: FMN; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 7) in the query (biounit: 2hfn.bio1) has 18 residues
No: Leader PDB Ligand Sequence Similarity
Pocket No.: 8; Query (leader) PDB : 2HFN; Ligand: FMN; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 8) in the query (biounit: 2hfn.bio1) has 20 residues
No: Leader PDB Ligand Sequence Similarity
Pocket No.: 9; Query (leader) PDB : 2HFN; Ligand: FMN; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 9) in the query (biounit: 2hfn.bio1) has 18 residues
No: Leader PDB Ligand Sequence Similarity
Pocket No.: 10; Query (leader) PDB : 2HFN; Ligand: FMN; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 10) in the query (biounit: 2hfn.bio1) has 18 residues
No: Leader PDB Ligand Sequence Similarity
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