Receptor
PDB id Resolution Class Description Source Keywords
2HFN 1.8 Å NON-ENZYME: SIGNAL_HORMONE CRYSTAL STRUCTURES OF THE SYNECHOCYSTIS PHOTORECEPTOR SLR169 DISTINCT STRUCTURAL STATES RELATED TO SIGNALING SYNECHOCYSTIS SP. BETA SHEET FERREDOXIN-LIKE FOLD FLAVIN BINDING PROTEIN PHOTORECEPTOR ELECTRON TRANSPORT
Ref.: CRYSTAL STRUCTURES OF THE SYNECHOCYSTIS PHOTORECEPT SLR1694 REVEAL DISTINCT STRUCTURAL STATES RELATED T SIGNALING. BIOCHEMISTRY V. 45 12687 2006
Ligand
Ligand Chain:Residue Validity Ligand Warnings Binding Data NGL Viewer Molecular Weight (Da) Formula SMILES
FMN A:201;
B:201;
C:201;
D:201;
E:201;
F:201;
G:201;
H:201;
I:201;
J:201;
Valid;
Valid;
Valid;
Valid;
Valid;
Valid;
Valid;
Valid;
Valid;
Valid;
none;
none;
none;
none;
none;
none;
none;
none;
none;
none;
submit data
456.344 C17 H21 N4 O9 P Cc1cc...
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90% Homology Family
Leader
PDB id Resolution Class Description Source Keywords
2HFN 1.8 Å NON-ENZYME: SIGNAL_HORMONE CRYSTAL STRUCTURES OF THE SYNECHOCYSTIS PHOTORECEPTOR SLR169 DISTINCT STRUCTURAL STATES RELATED TO SIGNALING SYNECHOCYSTIS SP. BETA SHEET FERREDOXIN-LIKE FOLD FLAVIN BINDING PROTEIN PHOTORECEPTOR ELECTRON TRANSPORT
Ref.: CRYSTAL STRUCTURES OF THE SYNECHOCYSTIS PHOTORECEPT SLR1694 REVEAL DISTINCT STRUCTURAL STATES RELATED T SIGNALING. BIOCHEMISTRY V. 45 12687 2006
Members (3)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 301 families.
1 2HFN - FMN C17 H21 N4 O9 P Cc1cc2c(cc....
2 3MZI - FMN C17 H21 N4 O9 P Cc1cc2c(cc....
3 2HFO - FMN C17 H21 N4 O9 P Cc1cc2c(cc....
70% Homology Family (3)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 221 families.
1 2HFN - FMN C17 H21 N4 O9 P Cc1cc2c(cc....
2 3MZI - FMN C17 H21 N4 O9 P Cc1cc2c(cc....
3 2HFO - FMN C17 H21 N4 O9 P Cc1cc2c(cc....
50% Homology Family (4)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 157 families.
1 1X0P - FAD C27 H33 N9 O15 P2 Cc1cc2c(cc....
2 2HFN - FMN C17 H21 N4 O9 P Cc1cc2c(cc....
3 3MZI - FMN C17 H21 N4 O9 P Cc1cc2c(cc....
4 2HFO - FMN C17 H21 N4 O9 P Cc1cc2c(cc....
Polypharmacology
Similar Ligands
Ligand no: 1; Ligand: FMN; Similar ligands found: 17
No: Ligand ECFP6 Tc MDL keys Tc
1 FMN 1 1
2 RBF 0.75641 0.876712
3 9O9 0.574468 0.934211
4 RS3 0.571429 0.831169
5 FAD 0.543307 0.876543
6 FAS 0.543307 0.876543
7 FAE 0.539062 0.865854
8 5DD 0.475248 0.972603
9 LFN 0.475 0.643836
10 C3F 0.473684 0.74359
11 CF4 0.463918 0.734177
12 FAY 0.446043 0.864198
13 FNR 0.444444 0.909091
14 RFL 0.442857 0.845238
15 4LS 0.411215 0.875
16 1VY 0.406593 0.769231
17 DLZ 0.404494 0.782051
Similar Binding Sites (Proteins are less than 50% similar to leader)
Pocket No.: 1; Query (leader) PDB : 2HFN; Ligand: FMN; Similar sites found with APoc: 17
This union binding pocket(no: 1) in the query (biounit: 2hfn.bio1) has 18 residues
No: Leader PDB Ligand Sequence Similarity
1 5N26 73M 10.4575
2 2BYC FMN 30.6569
3 2BYC FMN 30.6569
4 3GFZ FMN 35.9477
5 3GFZ FMN 35.9477
6 4YUS FMN 37.9085
7 2IYG FMN 38.7097
8 2IYG FMN 38.7097
9 5MBC FMN 41.8301
10 5MBC FMN 41.8301
11 1YRX FMN 42.9752
12 1YRX FMN 42.9752
13 1YRX FMN 42.9752
14 1YRX FMN 42.9752
15 1YRX FMN 42.9752
16 1YRX FMN 42.9752
17 1YRX FMN 42.9752
Pocket No.: 2; Query (leader) PDB : 2HFN; Ligand: FMN; Similar sites found with APoc: 17
This union binding pocket(no: 2) in the query (biounit: 2hfn.bio1) has 19 residues
No: Leader PDB Ligand Sequence Similarity
1 5N26 73M 10.4575
2 2BYC FMN 30.6569
3 2BYC FMN 30.6569
4 3GFZ FMN 35.9477
5 3GFZ FMN 35.9477
6 4YUS FMN 37.9085
7 2IYG FMN 38.7097
8 2IYG FMN 38.7097
9 5MBC FMN 41.8301
10 5MBC FMN 41.8301
11 1YRX FMN 42.9752
12 1YRX FMN 42.9752
13 1YRX FMN 42.9752
14 1YRX FMN 42.9752
15 1YRX FMN 42.9752
16 1YRX FMN 42.9752
17 1YRX FMN 42.9752
Pocket No.: 3; Query (leader) PDB : 2HFN; Ligand: FMN; Similar sites found with APoc: 16
This union binding pocket(no: 3) in the query (biounit: 2hfn.bio1) has 18 residues
No: Leader PDB Ligand Sequence Similarity
1 2BYC FMN 30.6569
2 2BYC FMN 30.6569
3 3GFZ FMN 35.9477
4 3GFZ FMN 35.9477
5 4YUS FMN 37.9085
6 2IYG FMN 38.7097
7 2IYG FMN 38.7097
8 5MBC FMN 41.8301
9 5MBC FMN 41.8301
10 1YRX FMN 42.9752
11 1YRX FMN 42.9752
12 1YRX FMN 42.9752
13 1YRX FMN 42.9752
14 1YRX FMN 42.9752
15 1YRX FMN 42.9752
16 1YRX FMN 42.9752
Pocket No.: 4; Query (leader) PDB : 2HFN; Ligand: FMN; Similar sites found with APoc: 17
This union binding pocket(no: 4) in the query (biounit: 2hfn.bio1) has 18 residues
No: Leader PDB Ligand Sequence Similarity
1 5N26 73M 10.4575
2 2BYC FMN 30.6569
3 2BYC FMN 30.6569
4 3GFZ FMN 35.9477
5 3GFZ FMN 35.9477
6 4YUS FMN 37.9085
7 2IYG FMN 38.7097
8 2IYG FMN 38.7097
9 5MBC FMN 41.8301
10 5MBC FMN 41.8301
11 1YRX FMN 42.9752
12 1YRX FMN 42.9752
13 1YRX FMN 42.9752
14 1YRX FMN 42.9752
15 1YRX FMN 42.9752
16 1YRX FMN 42.9752
17 1YRX FMN 42.9752
Pocket No.: 5; Query (leader) PDB : 2HFN; Ligand: FMN; Similar sites found with APoc: 16
This union binding pocket(no: 5) in the query (biounit: 2hfn.bio1) has 18 residues
No: Leader PDB Ligand Sequence Similarity
1 2BYC FMN 30.6569
2 2BYC FMN 30.6569
3 3GFZ FMN 35.9477
4 3GFZ FMN 35.9477
5 4YUS FMN 37.9085
6 2IYG FMN 38.7097
7 2IYG FMN 38.7097
8 5MBC FMN 41.8301
9 5MBC FMN 41.8301
10 1YRX FMN 42.9752
11 1YRX FMN 42.9752
12 1YRX FMN 42.9752
13 1YRX FMN 42.9752
14 1YRX FMN 42.9752
15 1YRX FMN 42.9752
16 1YRX FMN 42.9752
Pocket No.: 6; Query (leader) PDB : 2HFN; Ligand: FMN; Similar sites found with APoc: 17
This union binding pocket(no: 6) in the query (biounit: 2hfn.bio1) has 20 residues
No: Leader PDB Ligand Sequence Similarity
1 5N26 73M 10.4575
2 2BYC FMN 30.6569
3 2BYC FMN 30.6569
4 3GFZ FMN 35.9477
5 3GFZ FMN 35.9477
6 4YUS FMN 37.9085
7 2IYG FMN 38.7097
8 2IYG FMN 38.7097
9 5MBC FMN 41.8301
10 5MBC FMN 41.8301
11 1YRX FMN 42.9752
12 1YRX FMN 42.9752
13 1YRX FMN 42.9752
14 1YRX FMN 42.9752
15 1YRX FMN 42.9752
16 1YRX FMN 42.9752
17 1YRX FMN 42.9752
Pocket No.: 7; Query (leader) PDB : 2HFN; Ligand: FMN; Similar sites found with APoc: 16
This union binding pocket(no: 7) in the query (biounit: 2hfn.bio1) has 18 residues
No: Leader PDB Ligand Sequence Similarity
1 2BYC FMN 30.6569
2 2BYC FMN 30.6569
3 3GFZ FMN 35.9477
4 3GFZ FMN 35.9477
5 4YUS FMN 37.9085
6 2IYG FMN 38.7097
7 2IYG FMN 38.7097
8 5MBC FMN 41.8301
9 5MBC FMN 41.8301
10 1YRX FMN 42.9752
11 1YRX FMN 42.9752
12 1YRX FMN 42.9752
13 1YRX FMN 42.9752
14 1YRX FMN 42.9752
15 1YRX FMN 42.9752
16 1YRX FMN 42.9752
Pocket No.: 8; Query (leader) PDB : 2HFN; Ligand: FMN; Similar sites found with APoc: 17
This union binding pocket(no: 8) in the query (biounit: 2hfn.bio1) has 20 residues
No: Leader PDB Ligand Sequence Similarity
1 5N26 73M 10.4575
2 2BYC FMN 30.6569
3 2BYC FMN 30.6569
4 3GFZ FMN 35.9477
5 3GFZ FMN 35.9477
6 4YUS FMN 37.9085
7 2IYG FMN 38.7097
8 2IYG FMN 38.7097
9 5MBC FMN 41.8301
10 5MBC FMN 41.8301
11 1YRX FMN 42.9752
12 1YRX FMN 42.9752
13 1YRX FMN 42.9752
14 1YRX FMN 42.9752
15 1YRX FMN 42.9752
16 1YRX FMN 42.9752
17 1YRX FMN 42.9752
Pocket No.: 9; Query (leader) PDB : 2HFN; Ligand: FMN; Similar sites found with APoc: 17
This union binding pocket(no: 9) in the query (biounit: 2hfn.bio1) has 18 residues
No: Leader PDB Ligand Sequence Similarity
1 5N26 73M 10.4575
2 2BYC FMN 30.6569
3 2BYC FMN 30.6569
4 3GFZ FMN 35.9477
5 3GFZ FMN 35.9477
6 4YUS FMN 37.9085
7 2IYG FMN 38.7097
8 2IYG FMN 38.7097
9 5MBC FMN 41.8301
10 5MBC FMN 41.8301
11 1YRX FMN 42.9752
12 1YRX FMN 42.9752
13 1YRX FMN 42.9752
14 1YRX FMN 42.9752
15 1YRX FMN 42.9752
16 1YRX FMN 42.9752
17 1YRX FMN 42.9752
Pocket No.: 10; Query (leader) PDB : 2HFN; Ligand: FMN; Similar sites found with APoc: 16
This union binding pocket(no: 10) in the query (biounit: 2hfn.bio1) has 18 residues
No: Leader PDB Ligand Sequence Similarity
1 2BYC FMN 30.6569
2 2BYC FMN 30.6569
3 3GFZ FMN 35.9477
4 3GFZ FMN 35.9477
5 4YUS FMN 37.9085
6 2IYG FMN 38.7097
7 2IYG FMN 38.7097
8 5MBC FMN 41.8301
9 5MBC FMN 41.8301
10 1YRX FMN 42.9752
11 1YRX FMN 42.9752
12 1YRX FMN 42.9752
13 1YRX FMN 42.9752
14 1YRX FMN 42.9752
15 1YRX FMN 42.9752
16 1YRX FMN 42.9752
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