Receptor
PDB id Resolution Class Description Source Keywords
2GMH 2.5 Å EC: 1.5.5.1 STRUCTURE OF PORCINE ELECTRON TRANSFER FLAVOPROTEIN- UBIQUINONE OXIDOREDUCTASE IN COMPLEXED WITH UBIQUINONE SUS SCROFA ELECTRON-TRANSFER OXIDOREDUCTASE FLAVOPROTEIN UBIQUINONE
Ref.: STRUCTURE OF ELECTRON TRANSFER FLAVOPROTEIN-UBIQUINONE OXIDOREDUCTASE AND ELECTRON TRANSFER TO THE MITOCHONDRIAL UBIQUINONE POOL. PROC.NATL.ACAD.SCI.USA V. 103 16212 2006
Ligand
Ligand Chain:Residue Validity Ligand Warnings Binding Data NGL Viewer Molecular Weight (Da) Formula SMILES
BHG A:616;
A:617;
B:618;
Valid;
Valid;
Valid;
none;
none;
none;
submit data
264.315 C12 H24 O6 CCCCC...
EDO A:619;
A:621;
A:622;
A:623;
A:624;
A:625;
A:626;
A:627;
A:628;
B:620;
Invalid;
Invalid;
Invalid;
Invalid;
Invalid;
Invalid;
Invalid;
Invalid;
Invalid;
Invalid;
none;
none;
none;
none;
none;
none;
none;
none;
none;
none;
submit data
62.068 C2 H6 O2 C(CO)...
FAD A:611;
B:614;
Valid;
Valid;
none;
none;
submit data
785.55 C27 H33 N9 O15 P2 Cc1cc...
NA A:1070;
Part of Protein;
none;
submit data
22.99 Na [Na+]
SF4 A:610;
B:613;
Part of Protein;
Part of Protein;
none;
none;
submit data
351.64 Fe4 S4 [S]12...
UQ5 A:612;
B:615;
Valid;
Valid;
none;
none;
submit data
522.758 C34 H50 O4 CC1=C...
View in 3D viewer
90% Homology Family
Leader
PDB id Resolution Class Description Source Keywords
2GMH 2.5 Å EC: 1.5.5.1 STRUCTURE OF PORCINE ELECTRON TRANSFER FLAVOPROTEIN- UBIQUINONE OXIDOREDUCTASE IN COMPLEXED WITH UBIQUINONE SUS SCROFA ELECTRON-TRANSFER OXIDOREDUCTASE FLAVOPROTEIN UBIQUINONE
Ref.: STRUCTURE OF ELECTRON TRANSFER FLAVOPROTEIN-UBIQUINONE OXIDOREDUCTASE AND ELECTRON TRANSFER TO THE MITOCHONDRIAL UBIQUINONE POOL. PROC.NATL.ACAD.SCI.USA V. 103 16212 2006
Members (1)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 1 families.
1 2GMH - FAD C27 H33 N9 O15 P2 Cc1cc2c(cc....
70% Homology Family (1)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 1 families.
1 2GMH - FAD C27 H33 N9 O15 P2 Cc1cc2c(cc....
50% Homology Family (1)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 1 families.
1 2GMH - FAD C27 H33 N9 O15 P2 Cc1cc2c(cc....
Polypharmacology
Similar Ligands
Ligand no: 1; Ligand: BHG; Similar ligands found: 70
No: Ligand ECFP6 Tc MDL keys Tc
1 JZR 1 1
2 GLC HEX 1 1
3 HEX GLC 1 1
4 BHG 1 1
5 KGM 0.930233 0.975
6 B7G 0.930233 0.975
7 HSJ 0.909091 0.975
8 BNG 0.909091 0.975
9 BOG 0.909091 0.975
10 AFO 0.8 0.880952
11 DEG 0.795455 0.923077
12 LMT 0.655172 0.928571
13 DMU 0.655172 0.928571
14 UMQ 0.655172 0.928571
15 LMU 0.655172 0.928571
16 FK9 0.62963 0.926829
17 XNS 0.603448 0.880952
18 DR4 0.603448 0.880952
19 GLA GAL GLC NBU 0.540984 0.857143
20 BHG FUC 0.53125 0.906977
21 4YA 0.53125 0.906977
22 FUC BHG 0.53125 0.906977
23 EBQ 0.528302 0.761905
24 EBG 0.528302 0.761905
25 OPM MAN MAN 0.522388 0.904762
26 BGB 0.492958 0.906977
27 BHE 0.492537 0.906977
28 6UZ 0.477612 0.772727
29 RGG 0.471698 0.75
30 AIG FUC 0.470588 0.76
31 GLA GAL BGC 5VQ 0.467742 0.809524
32 BGL 0.465517 0.975
33 GYP 0.458333 0.775
34 MBG 0.458333 0.775
35 MMA 0.458333 0.775
36 AMG 0.458333 0.775
37 MAN MMA 0.45614 0.72093
38 FEE 0.454545 0.735849
39 GM3 0.447368 0.75
40 CM5 0.444444 0.809524
41 DLG FUC 0.442857 0.906977
42 BGC GLA 0.438596 0.714286
43 GLA GLC 0.438596 0.714286
44 GLA BGC 0.438596 0.714286
45 MLB 0.438596 0.714286
46 LAK 0.438596 0.714286
47 BMA GLA 0.438596 0.714286
48 GAL GAL 0.438596 0.714286
49 MAN BMA 0.438596 0.714286
50 GLA BMA 0.438596 0.714286
51 MA4 0.438356 0.809524
52 TRE 0.4375 0.714286
53 AOG FUC 0.43662 0.76
54 PBS 0.435897 0.735849
55 AGH 0.435897 0.735849
56 0SH 0.435897 0.735849
57 10M 0.428571 0.866667
58 MAL EDO 0.42623 0.72093
59 GLC GLC GLC 0.423729 0.714286
60 SER MAN 0.423729 0.638298
61 HTG 0.423729 0.860465
62 MAN MAN MAN 0.423729 0.714286
63 GLC GLC GLC GLC GLC BGC 0.423729 0.714286
64 GLC GLC GLC GLC BGC 0.423729 0.714286
65 SOG 0.416667 0.860465
66 MK0 0.413333 0.764706
67 DA8 0.410959 0.906977
68 GLA EGA 0.409836 0.761905
69 03F 0.409639 0.722222
70 GAL SPH NER 0.404762 0.735849
Ligand no: 2; Ligand: FAD; Similar ligands found: 119
No: Ligand ECFP6 Tc MDL keys Tc
1 FAS 1 1
2 FAD 1 1
3 FAY 0.859259 0.9875
4 RFL 0.852941 0.963855
5 6FA 0.794118 0.987654
6 DAL FAD PER 0.772414 0.951807
7 FAE 0.751773 0.987654
8 SFD 0.651007 0.860215
9 FDA 0.641892 0.906977
10 FNK 0.602564 0.876405
11 62F 0.572327 0.939024
12 F2N 0.566265 0.886364
13 FMN 0.543307 0.876543
14 FA9 0.526316 0.939759
15 6YU 0.516304 0.860215
16 CNV FAD 0.511905 0.908046
17 P6G FDA 0.511628 0.908046
18 FAD NBT 0.508876 0.83871
19 A2D 0.504065 0.875
20 P5F 0.491329 0.941176
21 FAD CNX 0.488506 0.8125
22 APR 0.488372 0.851852
23 AR6 0.488372 0.851852
24 AGS 0.484615 0.811765
25 SAP 0.484615 0.811765
26 M33 0.484375 0.864198
27 BA3 0.484127 0.875
28 FAD NBA 0.480663 0.802083
29 ATP 0.48062 0.851852
30 B4P 0.480315 0.875
31 ADP 0.480315 0.851852
32 AP5 0.480315 0.875
33 ANP 0.477273 0.831325
34 AQP 0.476923 0.851852
35 5FA 0.476923 0.851852
36 48N 0.469388 0.902439
37 OAD 0.467626 0.876543
38 GTA 0.465753 0.892857
39 AN2 0.465116 0.841463
40 AD9 0.462121 0.831325
41 3OD 0.460993 0.876543
42 RBF 0.460938 0.790123
43 FB0 0.460606 0.835165
44 139 0.460526 0.858824
45 AP0 0.46 0.835294
46 A22 0.459854 0.864198
47 ACP 0.458015 0.853659
48 8QN 0.456522 0.864198
49 PRX 0.454545 0.831325
50 A1R 0.453237 0.86747
51 G3A 0.452055 0.902439
52 T5A 0.45098 0.872093
53 G5P 0.44898 0.902439
54 ATF 0.448529 0.821429
55 50T 0.44697 0.819277
56 ACQ 0.444444 0.853659
57 PAJ 0.442857 0.847059
58 ADQ 0.442857 0.853659
59 5AL 0.441176 0.864198
60 ADX 0.439394 0.775281
61 CA0 0.439394 0.853659
62 A4P 0.437909 0.831461
63 25L 0.4375 0.864198
64 P33 FDA 0.436464 0.817204
65 5SV 0.435714 0.793103
66 TXE 0.434211 0.890244
67 OMR 0.434211 0.818182
68 ABM 0.434109 0.829268
69 A 0.433071 0.82716
70 AMP 0.433071 0.82716
71 4AD 0.432624 0.855422
72 ADJ 0.432258 0.818182
73 BIS 0.430556 0.802326
74 SRA 0.429688 0.788235
75 AFH 0.42953 0.825581
76 TXD 0.427632 0.890244
77 NXX 0.427632 0.865854
78 UP5 0.427632 0.878049
79 DND 0.427632 0.865854
80 6V0 0.427632 0.857143
81 SRP 0.42446 0.843373
82 PR8 0.423611 0.837209
83 TAT 0.423358 0.821429
84 AMO 0.422535 0.865854
85 PTJ 0.42069 0.835294
86 FYA 0.42069 0.864198
87 TXA 0.42069 0.865854
88 CNA 0.420382 0.865854
89 00A 0.41958 0.823529
90 AHX 0.41958 0.835294
91 MAP 0.41844 0.811765
92 NAI 0.418301 0.845238
93 AU1 0.41791 0.831325
94 AP2 0.416667 0.843373
95 A12 0.416667 0.843373
96 25A 0.415493 0.851852
97 AMP MG 0.415385 0.785714
98 COD 0.415094 0.842697
99 ADP BEF 0.414815 0.77907
100 BEF ADP 0.414815 0.77907
101 4TC 0.412903 0.879518
102 APC 0.411765 0.843373
103 NB8 0.410959 0.835294
104 ME8 0.410959 0.806818
105 1ZZ 0.410959 0.806818
106 4UW 0.409091 0.825581
107 NAX 0.409091 0.837209
108 RBY 0.408759 0.843373
109 ADV 0.408759 0.843373
110 ADP MG 0.407407 0.797619
111 P1H 0.405882 0.818182
112 OOB 0.405594 0.864198
113 A A 0.40411 0.829268
114 LAD 0.40411 0.825581
115 UPA 0.403846 0.86747
116 4UU 0.401316 0.833333
117 A3D 0.401235 0.876543
118 DLL 0.4 0.864198
119 XAH 0.4 0.806818
Ligand no: 3; Ligand: UQ5; Similar ligands found: 11
No: Ligand ECFP6 Tc MDL keys Tc
1 UQ7 1 0.970588
2 UQ 1 0.970588
3 U10 1 0.970588
4 UQ8 1 0.970588
5 UQ9 1 0.970588
6 UQ5 1 1
7 UQ2 0.92 0.969697
8 UQ1 0.603774 0.818182
9 MQ7 0.552239 0.684211
10 MQ9 0.552239 0.684211
11 UQ6 0.449275 0.756098
Similar Binding Sites (Proteins are less than 50% similar to leader)
Pocket No.: 1; Query (leader) PDB : 2GMH; Ligand: BHG; Similar sites found: 1
This union binding pocket(no: 1) in the query (biounit: 2gmh.bio1) has 6 residues
No: Leader PDB Ligand P-value (APoc) PS_Score (APoc) Sequence Similarity
1 4NW6 2NS 0.00943 0.43393 2.47678
Pocket No.: 2; Query (leader) PDB : 2GMH; Ligand: UQ5; Similar sites found: 33
This union binding pocket(no: 2) in the query (biounit: 2gmh.bio1) has 24 residues
No: Leader PDB Ligand P-value (APoc) PS_Score (APoc) Sequence Similarity
1 2ZFZ ARG 0.01819 0.40426 None
2 3LN0 52B 0.01097 0.40793 1.71233
3 5AAV GW5 0.01426 0.41366 2.38095
4 2Q2Y MKR 0.04496 0.40092 2.45232
5 2Q2Y ADP 0.04496 0.40092 2.45232
6 3G5N PB2 0.04381 0.40245 2.73109
7 2Z7I 742 0.01943 0.41455 3.52941
8 3KDU NKS 0.01255 0.40336 3.61011
9 3G9E RO7 0.007879 0.40782 3.69004
10 2A1L PCW 0.01264 0.408 3.7037
11 2XXP DSL 0.01203 0.42495 3.76884
12 1BZL FAD 0.04437 0.4088 4.93827
13 3E3U NVC 0.011 0.4072 5.07614
14 2GMM MAN MAN 0.02378 0.40902 5.55556
15 5IXK 6EW 0.009488 0.40194 5.70175
16 4ZOM 4Q3 0.04255 0.40055 5.77778
17 4MNS 2AX 0.01065 0.41479 6.28931
18 3MJY IJZ 0.006215 0.41107 6.6474
19 3MJY FMN 0.006215 0.41107 6.6474
20 3L9R L9Q 0.005826 0.41349 7.14286
21 3L9R L9R 0.011 0.40154 7.14286
22 2WLG SOP 0.003701 0.4389 7.44186
23 1RL4 BL5 0.006002 0.40454 7.44681
24 3WYJ H78 0.01156 0.42331 8.3004
25 1GP6 QUE 0.0028 0.41746 8.98876
26 1GP6 DH2 0.002797 0.41588 8.98876
27 1GP6 SIN 0.002797 0.41588 8.98876
28 2Y2B AH0 0.02519 0.40702 9.62567
29 5LXT GTP 0.03327 0.40514 9.66292
30 4WO4 JLS 0.005612 0.42079 10
31 5U98 1KX 0.02002 0.40893 10.101
32 4I67 G G G RPC 0.008517 0.42053 10.3448
33 2CJU PHX 0.03686 0.40264 11.5702
Pocket No.: 3; Query (leader) PDB : 2GMH; Ligand: BHG; Similar sites found: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 3) in the query (biounit: 2gmh.bio1) has 4 residues
No: Leader PDB Ligand P-value (APoc) PS_Score (APoc) Sequence Similarity
Pocket No.: 4; Query (leader) PDB : 2GMH; Ligand: FAD; Similar sites found: 350
This union binding pocket(no: 4) in the query (biounit: 2gmh.bio1) has 42 residues
No: Leader PDB Ligand P-value (APoc) PS_Score (APoc) Sequence Similarity
1 5J7X FAD 0.000001159 0.49588 1.0929
2 1UWK NAD 0.001112 0.40984 1.25673
3 1UWK URO 0.001112 0.40984 1.25673
4 4GXQ ATP 0.01946 0.40135 1.3834
5 4J36 1HR 0.0000001069 0.54351 1.68675
6 4J36 FAD 0.00000001545 0.53702 1.68675
7 1DLJ NAI 0.0003771 0.42978 1.74129
8 1DLJ UGA 0.00102 0.41487 1.74129
9 3QJ4 FAD 0.0000001776 0.5448 1.75439
10 4XQC 13D 0.0008204 0.41334 1.89474
11 1MO9 KPC 0.00000004913 0.59304 1.91205
12 1MO9 FAD 0.00000005728 0.58966 1.91205
13 5JCM NAD 0.0000001665 0.56096 1.99557
14 5JCM FAD 0.0000001554 0.56096 1.99557
15 5JCM ISD 0.0000001665 0.56096 1.99557
16 2ZV2 609 0.04994 0.40215 2.01342
17 4RSL FAD 0.0000005413 0.50114 2.02247
18 5UAO FAD 0.00000145 0.49335 2.03327
19 4XYB NDP 0.003705 0.40211 2.04604
20 3AYI FAD 0.0000004983 0.53162 2.05479
21 3AYI HCI 0.0000005401 0.53162 2.05479
22 5EVY FAD 0.0000002006 0.45696 2.05479
23 4MO2 FDA 0.0000005769 0.53081 2.17391
24 4MO2 FAD 0.0000008139 0.5217 2.17391
25 2ZFI ADP 0.03505 0.41034 2.18579
26 2FK8 SAM 0.007806 0.41937 2.20126
27 4BV6 FAD 0.00000002218 0.56323 2.23124
28 3Q9T FAY 0.000005102 0.4763 2.25303
29 3GFB NAD 0.0006449 0.44731 2.28571
30 5M67 3D1 0.001731 0.40606 2.29645
31 5M67 NAD 0.001772 0.40571 2.29645
32 1E1M NAP 0.0000004049 0.53598 2.3913
33 1E1M FAD 0.0000004049 0.53598 2.3913
34 3L9W AMP 0.0001158 0.40899 2.42131
35 2NVK FAD 0.00000001374 0.5702 2.45902
36 3O9Z NAD 0.001895 0.40196 2.5641
37 1PS9 FAD 0.00000003344 0.55726 2.56849
38 2CUL FAD 0.00000001236 0.547 2.58621
39 3NT6 FAD 0.000000007532 0.5663 2.61324
40 3NTA FAD 0.00000001919 0.55317 2.61324
41 4YUW 4JU 0.004993 0.41645 2.63158
42 4YUW S4M 0.005893 0.41326 2.63158
43 3NTD FAD 0.00000001413 0.55736 2.65487
44 1GET NAP 0.00000004428 0.58483 2.66667
45 1GET FAD 0.00000003914 0.5846 2.66667
46 5TUF FAD 0.00000001292 0.61489 2.68949
47 5TUF TDC 0.0000002722 0.45709 2.68949
48 3BAZ NAP 0.002774 0.42713 2.7027
49 1JQ3 AAT 0.001404 0.42017 2.7027
50 4EIP K2C 0.000000067 0.55491 2.73224
51 4EIP FAD 0.000000067 0.55491 2.73224
52 1YKJ PHB 0.00000003006 0.58531 2.79188
53 1YKJ FAD 0.00000003006 0.58531 2.79188
54 2IID FAD 0.00000005784 0.49268 2.81124
55 2IID PHE 0.00000005784 0.49268 2.81124
56 4CNK FAD 0.00000000664 0.56835 2.8133
57 3GMB FAD 0.000000009876 0.54638 2.89157
58 3WE0 FAD 0.00000021 0.53361 2.93103
59 1COY AND 0.000001008 0.52561 2.95858
60 1COY FAD 0.0000005561 0.51636 2.95858
61 2E5V FAD 0.0000000394 0.55814 2.9661
62 3LZW NAP 0.0000006935 0.53244 3.01205
63 3LZW FAD 0.00000008962 0.53141 3.01205
64 4REP FAD 0.00000004213 0.54648 3.0303
65 3AB1 FAD 0.00000002944 0.55528 3.05556
66 2JB2 PHE 0.0000003958 0.51803 3.06748
67 2JB2 FAD 0.0000003131 0.51803 3.06748
68 5TS5 FAD 0.00000002423 0.56195 3.09917
69 3AXB PRO 0.00000002508 0.56312 3.125
70 3AXB FAD 0.000000009377 0.56048 3.125
71 3GD4 NAD 0.00000009237 0.57828 3.13112
72 3GD4 FAD 0.00000006883 0.56781 3.13112
73 3UCL FAD 0.000008429 0.49989 3.14136
74 3UCL CYH 0.000008429 0.49989 3.14136
75 3UCL NAP 0.00001001 0.49984 3.14136
76 5JCA NDP 0.000000144 0.55994 3.16901
77 5JCA FAD 0.00000003795 0.55708 3.16901
78 3ZNN FAD 0.000001041 0.52512 3.17003
79 3ZNN 4WL 0.000001041 0.52512 3.17003
80 3WGT QSC 0.0000006679 0.52345 3.17003
81 3WGT FAD 0.0000006219 0.52321 3.17003
82 4EMI NAD 0.0000000279 0.58409 3.17073
83 4EMI FAD 0.000000003762 0.57608 3.17073
84 5EB4 FAD 0.0000004845 0.51521 3.19549
85 2QA1 FAD 0.0000000001128 0.60945 3.2
86 4M52 FAD 0.000000006169 0.58361 3.21888
87 3VPH OXM 0.0001691 0.41504 3.22581
88 3VPH NAD 0.0001685 0.40872 3.22581
89 2A8X FAD 0.000000003981 0.59176 3.23276
90 2VDV SAM 0.008712 0.43408 3.25203
91 1HDG NAD 0.0008555 0.44863 3.31325
92 4U8P FDA 0.000000301 0.55378 3.31384
93 4U8P UDP 0.0000003414 0.55378 3.31384
94 3GF4 UPG 0.00000226 0.51435 3.33333
95 3GF4 FAD 0.000002641 0.50873 3.33333
96 3KLJ FAD 0.000000003903 0.55193 3.37662
97 3QVP FAD 0.0000002197 0.53294 3.43053
98 3GGO ENO 0.0008941 0.41002 3.50318
99 3GGO NAI 0.0008941 0.41002 3.50318
100 1KOL NAD 0.0005799 0.4017 3.51759
101 1KNR FAD 0.00000002595 0.55743 3.51852
102 5EZ7 FAD 0.0000006319 0.50781 3.57143
103 3HAD NAD 0.001705 0.40628 3.57143
104 2ZXI FAD 0.00000004771 0.53674 3.59589
105 4YNU FAD 0.00000007785 0.5497 3.67776
106 4YNU LGC 0.0000001256 0.5484 3.67776
107 3NJ4 NAD 0.01104 0.40763 3.67816
108 3OFK SAH 0.005634 0.4227 3.7037
109 2WET FAD 0.000000166 0.53395 3.7182
110 4DSG UDP 0.0000006526 0.53555 3.71901
111 4DSG FAD 0.0000006526 0.53555 3.71901
112 2CDU FAD 0.00000001276 0.55073 3.76106
113 2CDU ADP 0.0000001016 0.4274 3.76106
114 2V6O FAD 0.00000006164 0.58371 3.76712
115 4TXI FAD 0.00000000641 0.54091 3.76712
116 4BJZ P3A 0.00000009699 0.57457 3.77358
117 1KPG SAH 0.006123 0.4211 3.83275
118 1C0I BE2 0.006031 0.41288 3.85675
119 1C0I FAD 0.006031 0.41288 3.85675
120 4ZCC NAI 0.0000005755 0.52821 3.86905
121 4ZCC FAD 0.0000005755 0.52821 3.86905
122 1UXG NAD 0.0002969 0.41654 3.8835
123 4FWE FAD 0.000000008921 0.57993 3.89447
124 2AQJ FAD 0.000000466 0.53964 3.90335
125 2AQJ TRP 0.0000004729 0.5383 3.90335
126 4HA6 FAD 0.000001175 0.50836 3.93701
127 5WGR FAD 0.00000000665 0.57689 3.93836
128 2VHW NAI 0.00004557 0.43573 3.97878
129 2Q1S NAI 0.0005194 0.41903 3.97878
130 2R4J FAD 0.0000001114 0.55422 3.99202
131 2R4J 13P 0.0000001114 0.55422 3.99202
132 4AP3 NAP 0.000004421 0.50609 4.00729
133 4AP3 FAD 0.000004421 0.50609 4.00729
134 3F8D FAD 0.0000007161 0.54308 4.02477
135 4GUT FAD 0.00000001286 0.57938 4.03226
136 4GUS FAD 0.00000001233 0.57682 4.03226
137 4HSU FAD 0.00000003309 0.56229 4.03226
138 4YRY FAD 0.00000005764 0.55097 4.05983
139 4YRY NAD 0.0000001778 0.54843 4.05983
140 1A5Z NAD 0.00001312 0.40231 4.07523
141 4MIG G3F 0.0000007413 0.52189 4.10959
142 4AT0 FAD 0.0000009549 0.51682 4.10959
143 5MQ6 NDP 0.00002865 0.4009 4.10959
144 4JNA FAD 0.000000009594 0.57716 4.11765
145 4USQ FAD 0.0000002833 0.5005 4.15512
146 2V3A FAD 0.00000008874 0.53231 4.16667
147 5TUK FAD 0.0000000539 0.49435 4.16667
148 3LXD FAD 0.00000001865 0.54059 4.33735
149 3G2O SAM 0.009683 0.42131 4.34783
150 1MUU NAD 0.00002699 0.40663 4.3578
151 2YVF FAD 0.0000002397 0.55097 4.41176
152 2YVF NAD 0.0000002575 0.55097 4.41176
153 2BRY FAD 0.000000003508 0.55335 4.42656
154 1TDF FAD 0.00000005009 0.55922 4.43038
155 1TDF NAP 0.0000002959 0.557 4.43038
156 4USR FAD 0.0000004526 0.48974 4.43213
157 2DKH 3HB 0.00000002005 0.55687 4.45205
158 2DKH FAD 0.000000003299 0.55402 4.45205
159 1GTE FAD 0.0000004861 0.54008 4.45205
160 1RSG FAD 0.00000003419 0.5586 4.45736
161 4UP3 FAD 0.00000005693 0.54589 4.4586
162 2NPX NAD 0.0000002486 0.54814 4.47427
163 2NPX FAD 0.00000005089 0.53587 4.47427
164 1YY5 FAD 0.00000002055 0.56931 4.48343
165 2Q0L FAD 0.00000001974 0.56493 4.50161
166 2X3N FAD 0.00000002909 0.54323 4.51128
167 1FL2 FAD 0.00000004016 0.54718 4.51613
168 2XVF FAD 0.000004497 0.47277 4.52586
169 1CER NAD 0.0002604 0.46677 4.53172
170 3T31 DCQ 0.0000007643 0.52983 4.57666
171 3T31 FAD 0.0000006574 0.52983 4.57666
172 1VQW FAD 0.0000002542 0.49577 4.59519
173 2C7G FAD 0.000001067 0.52362 4.60526
174 2C7G ODP 0.000001455 0.51778 4.60526
175 3K7M FAD 0.0000001476 0.55125 4.64037
176 2VVM FAD 0.0000003757 0.51889 4.64646
177 2VVL FAD 0.0000005042 0.51779 4.64646
178 1RYI FAD 0.0000004114 0.52075 4.71204
179 1RYI GOA 0.001583 0.43305 4.71204
180 4TM3 FAD 0.000004288 0.51313 4.74041
181 2XVE FAD 0.00002748 0.47796 4.74138
182 3ICT FAD 0.000000002579 0.57688 4.7619
183 3ICS FAD 0.000000006076 0.56927 4.7619
184 3ICR FAD 0.000000004789 0.5682 4.7619
185 3ICT ADP 0.00000002971 0.41626 4.7619
186 3ICS ADP 0.00000003349 0.41533 4.7619
187 4Z24 FAD 0.00000003165 0.55973 4.79452
188 2UZ1 TPP 0.008518 0.40659 4.79574
189 4D04 FAD 0.000005701 0.50411 4.79705
190 4D04 NAP 0.000005701 0.50411 4.79705
191 1MV8 NAD 0.00004681 0.40476 4.81651
192 3OJO NAD 0.00001482 0.40367 4.87239
193 1H82 FAD 0.0000001054 0.55886 4.87288
194 1H82 GZZ 0.0000001545 0.55886 4.87288
195 5TTJ FAD 0.0000002006 0.52463 4.89796
196 2GV8 FAD 0.0000003248 0.49677 4.9217
197 2GVC FAD 0.000000241 0.49646 4.9217
198 2Q7V FAD 0.000000009959 0.57488 4.92308
199 4NEC SAH 0.02897 0.40465 4.92424
200 1NVM NAD 0.0001858 0.40048 4.92754
201 1BZL FAD 0.0000001245 0.58802 4.93827
202 5EOW FAD 0.000000002566 0.5648 4.96575
203 2RGH FAD 0.00000003776 0.55202 4.96575
204 4MOP 2H5 0.0000009421 0.52202 4.96575
205 2RGO FAD 0.0000001641 0.52034 4.96575
206 5JE8 NAD 0.0005435 0.45691 4.96689
207 3GDH SAH 0.0109 0.40459 4.97925
208 1LSS NAD 0.000005154 0.41079 5
209 5FJN BE2 0.0000000146 0.57594 5.04386
210 5FJN FAD 0.00000002636 0.5624 5.04386
211 1D4D FAD 0.00000002527 0.56466 5.06993
212 4NTC FAD 0.00000000395 0.58834 5.07463
213 2VOH CIT 0.03254 0.40827 5.09554
214 5HSA FAS 0.0000005337 0.51696 5.13699
215 1N4W FAD 0.0000004716 0.52174 5.15873
216 5KMS FAD 0.00000005652 0.53072 5.18518
217 5KMS NAD 0.000002148 0.51513 5.18518
218 1GPE FAD 0.0000001243 0.5443 5.30822
219 1DJN ADP 0.000000002029 0.50271 5.30822
220 3CTY FAD 0.000000006204 0.58694 5.32915
221 4D7E FAD 0.000007506 0.46307 5.36131
222 4IV9 FAD 0.0000001188 0.5353 5.386
223 2RAB NAD 0.00000005018 0.58072 5.39957
224 2RAB FAD 0.0000000164 0.57262 5.39957
225 3SQP FAD 0.0000006148 0.58992 5.43933
226 1PN0 IPH 0.000000003005 0.60414 5.47945
227 1PN0 FAD 0.000000002702 0.60414 5.47945
228 2Z3Y F2N 0.00000004649 0.55572 5.47945
229 3S5W FAD 0.0000005172 0.47802 5.47945
230 4X9M FAD 0.0000001072 0.5371 5.50239
231 1FEC FAD 0.00000001116 0.58148 5.5102
232 3CGB FAD 0.00000000482 0.56865 5.625
233 1CF2 NAP 0.00004253 0.40986 5.63798
234 1ELI PYC 0.000003543 0.48105 5.65553
235 4RL4 PPV 0.02084 0.42902 5.66038
236 3LAD FAD 0.000000004161 0.58936 5.67227
237 5G3U ITW 0.000001274 0.50855 5.67376
238 5G3U FDA 0.0000006278 0.50521 5.67376
239 1NAA ABL 0.0000001905 0.54739 5.73013
240 1NAA 6FA 0.0000001509 0.53845 5.73013
241 5VN0 FAD 0.00000003461 0.5696 5.79151
242 5VN0 NAI 0.0000003755 0.45553 5.79151
243 1HYH NAD 0.0001488 0.40426 5.82524
244 4C3Y FAD 0.00000476 0.48513 5.84906
245 4C3Y ANB 0.000009905 0.48082 5.84906
246 1BW9 NAD 0.0001995 0.48706 5.89888
247 1ZMD FAD 0.000000004667 0.58943 5.90717
248 4JDR FAD 0.000000005101 0.58461 5.90717
249 1ZMD NAI 0.0000001966 0.46359 5.90717
250 1C1X NAD 0.0002152 0.47019 5.91549
251 3IHG FAD 0.00000000165 0.54209 5.98131
252 5ODQ FAD 0.0000000306 0.56022 5.99315
253 1QO8 FAD 0.0000000137 0.57196 6.00707
254 3NYC FAD 0.0000003011 0.53795 6.03675
255 3NYC IAR 0.0000003011 0.53795 6.03675
256 5I39 FAD 0.00000005957 0.5371 6.12745
257 4NTD FAD 0.00000002404 0.55016 6.17647
258 5BVA FAD 0.0000000002471 0.63438 6.35697
259 5U8U FAD 0.0000000083 0.60762 6.44491
260 2F1K NAP 0.00005635 0.40137 6.45161
261 2WPF WPF 0.00000007112 0.59875 6.46465
262 2WPF FAD 0.00000007015 0.59664 6.46465
263 1YQZ FAD 0.0000003647 0.5434 6.621
264 5JWC FAD 0.00000002823 0.53463 6.71785
265 3GDN HBX 0.000001017 0.51966 6.71785
266 3GDN FAD 0.0000006449 0.5157 6.71785
267 2YG3 FAD 0.00000003561 0.55264 6.84327
268 4B63 ORN 0.02205 0.42577 6.98603
269 4B63 NAP 0.02279 0.42577 6.98603
270 4B63 FAD 0.02205 0.42577 6.98603
271 1E6E FAD 0.00000002743 0.54065 7.03125
272 3AD8 NAD 0.000000002949 0.55875 7.07071
273 3AD8 PYC 0.0000004457 0.54665 7.07071
274 3AD8 FAD 0.0000004457 0.54665 7.07071
275 1I8T FAD 0.0000004534 0.51301 7.08447
276 1Q1R FAD 0.00000001823 0.55 7.19258
277 1O94 ADP 0.000000002853 0.50535 7.19697
278 2HQM FAD 0.00000001537 0.57028 7.30689
279 1JNR FAD 0.0000001118 0.57526 7.33333
280 2RGJ FAD 0.000000006207 0.54755 7.46269
281 4EMJ FAD 0.00000001191 0.56429 7.47664
282 1V59 FAD 0.000000002215 0.6038 7.53138
283 2IVD FAD 0.00000002582 0.54328 7.53138
284 1V59 NAD 0.00000001221 0.42173 7.53138
285 3CGD NAD 0.0000001264 0.57609 7.53425
286 3CGD COA 0.0000001264 0.57609 7.53425
287 3CGD FAD 0.0000001264 0.57609 7.53425
288 2B9W FAD 0.0000002159 0.54794 7.54717
289 5BR7 FLC 0.000001238 0.52673 7.63359
290 5BR7 FAD 0.00000125 0.52659 7.63359
291 1ZK7 FAD 0.000000009536 0.58223 7.70878
292 4RPL FAD 0.0000005625 0.541 7.76942
293 4RPL 3UC 0.000000821 0.53809 7.76942
294 1HKU NAD 0.001043 0.43028 7.82123
295 1LVL FAD 0.0000000159 0.57145 7.86026
296 1LVL NAD 0.00000005428 0.45696 7.86026
297 3UOY NAP 0.000007121 0.50431 7.88991
298 3UOY FAD 0.000007121 0.50431 7.88991
299 5MBX FAD 0.000000155 0.55176 8.04829
300 5MBX SP5 0.000000155 0.55176 8.04829
301 2GAG NAD 0.000000001945 0.58003 8.08081
302 2GAG FAD 0.0000002872 0.53192 8.08081
303 2GAG FOA 0.0000002872 0.53192 8.08081
304 3NKS FAD 0.0000001011 0.52663 8.1761
305 1E3I CXF 0.002059 0.40707 8.24468
306 2HMT NAI 0.00000675 0.41245 8.33333
307 4DMG SAM 0.0176 0.42234 8.39695
308 4ZVV NAD 0.0009065 0.42335 8.43373
309 4ZVV GN0 0.0009065 0.42335 8.43373
310 3FG2 FAD 0.00000001607 0.53272 8.66337
311 4YCA NDP 0.0000772 0.4886 8.84354
312 1VDC FAD 0.0000001669 0.54278 9.00901
313 4J56 FAD 0.00000002285 0.56774 9.42699
314 3ITJ FAD 0.000000176 0.54336 9.46746
315 1LDN NAD 0.0001163 0.40755 9.49367
316 3JV7 NAD 0.0003484 0.45179 9.56522
317 5J60 FAD 0.000000002889 0.58866 9.6875
318 3HDY FAD 0.000002069 0.5188 10.3275
319 3HDY FDA 0.000002144 0.51825 10.3275
320 3HDY GDU 0.000002287 0.51825 10.3275
321 1REO FAD 0.00000004987 0.54445 10.4938
322 2Y6Q I7T 0.0000001408 0.5439 10.804
323 2Y6Q FAD 0.00000002406 0.52448 10.804
324 2F5Z FAD 0.000000005871 0.58606 10.9375
325 3QFA FAD 0.00000001579 0.56989 11.2069
326 3DMH SAM 0.00895 0.41668 11.2861
327 4K5S PM0 0.00000008529 0.55418 11.5672
328 4K5S FAD 0.000000004527 0.55062 11.5672
329 3G5S FAD 0.000000005762 0.56574 11.7381
330 1Q9I TEO 0.00000006263 0.56803 12.0841
331 1Q9I FAD 0.00000006263 0.48208 12.0841
332 2JJQ SAH 0.006916 0.4391 13.4118
333 1XHC FAD 0.000000001217 0.58253 13.624
334 3E1T FAD 0.0000000001628 0.63863 14.8438
335 3OZ2 FAD 0.000000000003062 0.68775 14.8615
336 1RP0 AHZ 0.00000000862 0.53329 15.493
337 4G74 FAD 0.00000009673 0.52406 15.7371
338 4G74 UQ5 0.0000006413 0.52275 15.7371
339 2YVJ FAD 0.00000003226 0.54184 16.5138
340 2YVJ NAI 0.0000005585 0.42064 16.5138
341 4J4H NAI 0.001696 0.40454 17.3745
342 4J4H 1J1 0.001696 0.40454 17.3745
343 5MZI FYK 0.00000002054 0.58881 17.5705
344 5MZI FAD 0.00000001896 0.58881 17.5705
345 5BUK FAD 0.0000000002427 0.63465 18
346 3RNM FAD 0.000000006098 0.5855 18.9655
347 4YSX FAD 0.000000007995 0.57428 26.9231
348 2V3B FAD 0.00000009219 0.52808 32.7273
349 4OPC FDA 0.0000000004763 0.68021 34.2163
350 4OPC PGT 0.0000000006902 0.68021 34.2163
Pocket No.: 5; Query (leader) PDB : 2GMH; Ligand: FAD; Similar sites found: 10
This union binding pocket(no: 5) in the query (biounit: 2gmh.bio2) has 48 residues
No: Leader PDB Ligand P-value (APoc) PS_Score (APoc) Sequence Similarity
1 1M2W NAD 0.008039 0.41831 2.43408
2 4BJZ FAD 0.0004967 0.46 3.77358
3 2B5W NAP 0.005067 0.40046 4.7619
4 3E3U NVC 0.03146 0.41086 5.07614
5 5N53 8NB 0.04325 0.41898 5.12821
6 5LFV SIA GAL NAG 0.02805 0.42462 6.62461
7 4L50 D8X 0.03304 0.41305 8.27068
8 1G8S MET 0.04812 0.41645 9.13043
9 2ZGY GDP 0.02425 0.40739 10.3125
10 3FPZ AHZ 0.006735 0.42068 10.4294
Pocket No.: 6; Query (leader) PDB : 2GMH; Ligand: UQ5; Similar sites found: 2
This union binding pocket(no: 6) in the query (biounit: 2gmh.bio2) has 23 residues
No: Leader PDB Ligand P-value (APoc) PS_Score (APoc) Sequence Similarity
1 4KOT CE3 0.009239 0.41211 4.32099
2 3HUJ AGH 0.02387 0.40066 10.101
Pocket No.: 7; Query (leader) PDB : 2GMH; Ligand: BHG; Similar sites found: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 7) in the query (biounit: 2gmh.bio2) has 2 residues
No: Leader PDB Ligand P-value (APoc) PS_Score (APoc) Sequence Similarity
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