Receptor
PDB id Resolution Class Description Source Keywords
2GLX 2.2 Å EC: 1.1.1.263 CRYSTAL STRUCTURE ANALYSIS OF BACTERIAL 1,5-AF REDUCTASE ENSIFER ADHAERENS NADP(H) DEPENDENT REDUCTASE ROSSMANN-FOLD BACTERIAL 15- ANHYDRO-D-FRUCTOSE REDUCTASE SUGAR METABOLISM 15-ANHYDROD-FRUCTOSE 15-ANHYDRO-D-MANNITOL OXIDOREDUCTASE
Ref.: CRYSTAL STRUCTURE OF NADP(H)-DEPENDENT 1,5-ANHYDRO-D-FRUCTOSE REDUCTASE FROM SINORHIZOBIUM MORELENSE AT 2.2 A RESOLUTION: CONSTRUCTION OF A NADH-ACCEPTING MUTANT AND ITS APPLICATION IN RARE SUGAR SYNTHESIS BIOCHEMISTRY V. 45 10030 2
Ligand
Ligand Chain:Residue Validity Ligand Warnings Binding Data NGL Viewer Molecular Weight (Da) Formula SMILES
ACT A:1502;
B:2502;
C:3502;
D:4502;
E:5502;
F:6502;
Invalid;
Invalid;
Invalid;
Invalid;
Invalid;
Invalid;
none;
none;
none;
none;
none;
none;
submit data
59.044 C2 H3 O2 CC(=O...
NDP A:1500;
B:2500;
C:3500;
D:4500;
E:5500;
F:6500;
Valid;
Valid;
Valid;
Valid;
Valid;
Valid;
none;
none;
none;
none;
none;
none;
submit data
745.421 C21 H30 N7 O17 P3 c1nc(...
View in 3D viewer
90% Homology Family
Leader
PDB id Resolution Class Description Source Keywords
2GLX 2.2 Å EC: 1.1.1.263 CRYSTAL STRUCTURE ANALYSIS OF BACTERIAL 1,5-AF REDUCTASE ENSIFER ADHAERENS NADP(H) DEPENDENT REDUCTASE ROSSMANN-FOLD BACTERIAL 15- ANHYDRO-D-FRUCTOSE REDUCTASE SUGAR METABOLISM 15-ANHYDROD-FRUCTOSE 15-ANHYDRO-D-MANNITOL OXIDOREDUCTASE
Ref.: CRYSTAL STRUCTURE OF NADP(H)-DEPENDENT 1,5-ANHYDRO-D-FRUCTOSE REDUCTASE FROM SINORHIZOBIUM MORELENSE AT 2.2 A RESOLUTION: CONSTRUCTION OF A NADH-ACCEPTING MUTANT AND ITS APPLICATION IN RARE SUGAR SYNTHESIS BIOCHEMISTRY V. 45 10030 2
Members (1)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 1 families.
1 2GLX - NDP C21 H30 N7 O17 P3 c1nc(c2c(n....
70% Homology Family (2)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 1 families.
1 4KOA - NDP C21 H30 N7 O17 P3 c1nc(c2c(n....
2 2GLX - NDP C21 H30 N7 O17 P3 c1nc(c2c(n....
50% Homology Family (2)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 1 families.
1 4KOA - NDP C21 H30 N7 O17 P3 c1nc(c2c(n....
2 2GLX - NDP C21 H30 N7 O17 P3 c1nc(c2c(n....
Polypharmacology
Similar Ligands
Ligand no: 1; Ligand: NDP; Similar ligands found: 159
No: Ligand ECFP6 Tc MDL keys Tc
1 NDP 1 1
2 0WD 0.827273 1
3 NAI 0.803738 0.986842
4 NMN AMP PO4 0.794643 0.948052
5 NPW 0.692308 0.962025
6 NZQ 0.686441 0.987013
7 DG1 0.68 1
8 1DG 0.68 1
9 A2R 0.650943 0.909091
10 A22 0.64486 0.934211
11 TXP 0.644628 0.924051
12 ATR 0.640777 0.894737
13 NA7 0.636364 0.886076
14 XNP 0.620968 0.949367
15 AP0 0.598361 0.948718
16 A2P 0.598039 0.881579
17 NJP 0.574803 0.923077
18 25L 0.550847 0.934211
19 ODP 0.550388 0.936709
20 NAX 0.544 0.949367
21 25A 0.53913 0.921053
22 2AM 0.529412 0.87013
23 6V0 0.519685 0.974026
24 NAP 0.514493 0.922078
25 EAD 0.507143 0.949367
26 A2D 0.504673 0.921053
27 TXE 0.503876 0.935897
28 NA0 0.496454 0.910256
29 TXD 0.496124 0.911392
30 SAP 0.495575 0.875
31 AGS 0.495575 0.875
32 P1H 0.493056 0.925926
33 CO7 0.489796 0.791209
34 TAP 0.489362 0.864198
35 PAP 0.482456 0.907895
36 BA3 0.481818 0.921053
37 NAJ PZO 0.478261 0.924051
38 ATP 0.477876 0.921053
39 B4P 0.477477 0.921053
40 ADP 0.477477 0.921053
41 AP5 0.477477 0.921053
42 OAD 0.47541 0.897436
43 5FA 0.473684 0.921053
44 AR6 0.473684 0.896104
45 APR 0.473684 0.896104
46 AQP 0.473684 0.921053
47 AN2 0.473214 0.909091
48 3OD 0.467742 0.897436
49 50T 0.464912 0.884615
50 PO4 PO4 A A A A PO4 0.463415 0.857143
51 V3L 0.461538 0.896104
52 2A5 0.46087 0.85
53 A1R 0.459016 0.841463
54 ADQ 0.459016 0.897436
55 4AD 0.459016 0.875
56 OVE 0.458716 0.8375
57 OMR 0.458647 0.813953
58 PPS 0.457627 0.811765
59 AD9 0.456897 0.897436
60 CA0 0.45614 0.897436
61 M33 0.45614 0.884615
62 ADJ 0.455882 0.879518
63 A3P 0.455357 0.894737
64 ACP 0.452174 0.897436
65 ENP 0.451613 0.85
66 UP5 0.451128 0.948052
67 SRP 0.45 0.8625
68 ANP 0.449153 0.897436
69 ACQ 0.449153 0.897436
70 PRX 0.448276 0.82716
71 5AL 0.445378 0.884615
72 7D4 0.443478 0.8375
73 ADX 0.443478 0.811765
74 AMP 0.436364 0.894737
75 A 0.436364 0.894737
76 4TC 0.433824 0.924051
77 7D3 0.433628 0.8375
78 ETB 0.433566 0.797753
79 DCA 0.433566 0.788889
80 1ZZ 0.433071 0.802326
81 BIS 0.433071 0.864198
82 00A 0.432 0.864198
83 ATF 0.429752 0.886076
84 0T1 0.427586 0.788889
85 5SV 0.427419 0.788235
86 8QN 0.427419 0.884615
87 3AM 0.427273 0.857143
88 N01 0.426573 0.884615
89 PR8 0.425197 0.811765
90 WAQ 0.425197 0.841463
91 LAD 0.425197 0.821429
92 DTP 0.425 0.8375
93 AMO 0.424 0.886076
94 PAJ 0.424 0.843373
95 APC 0.423729 0.886076
96 UPA 0.423358 0.935897
97 48N 0.422222 0.853659
98 FYA 0.421875 0.860759
99 PTJ 0.421875 0.853659
100 CNA 0.421429 0.910256
101 PUA 0.42069 0.9125
102 NXX 0.419118 0.910256
103 DND 0.419118 0.910256
104 AV2 0.418033 0.848101
105 COA 0.417808 0.788889
106 3UK 0.417323 0.897436
107 OOB 0.416 0.909091
108 IVC 0.415584 0.78022
109 DAT 0.415254 0.8375
110 NDO 0.414966 0.897436
111 139 0.414286 0.901235
112 3AT 0.413223 0.896104
113 TAT 0.413223 0.886076
114 YLB 0.413043 0.784091
115 62F 0.4125 0.823529
116 ABM 0.412281 0.848101
117 YAP 0.412214 0.875
118 YLP 0.411765 0.784091
119 ME8 0.410853 0.802326
120 NB8 0.410853 0.853659
121 SON 0.410256 0.886076
122 DLL 0.409449 0.909091
123 AHX 0.409449 0.853659
124 COS 0.409396 0.771739
125 AMX 0.409396 0.797753
126 CAO 0.409396 0.763441
127 30N 0.409396 0.72449
128 7D5 0.409091 0.8125
129 4UW 0.408759 0.9125
130 APX 0.407692 0.841463
131 SRA 0.40708 0.85
132 CMX 0.406667 0.788889
133 SCO 0.406667 0.788889
134 TYM 0.405797 0.886076
135 COD 0.405594 0.777778
136 OXK 0.405229 0.771739
137 CA6 0.405229 0.70297
138 A12 0.405172 0.886076
139 AP2 0.405172 0.886076
140 9SN 0.40458 0.853659
141 LAQ 0.404412 0.802326
142 T5A 0.404255 0.914634
143 FAM 0.403974 0.771739
144 ACO 0.403974 0.763441
145 FCX 0.403974 0.763441
146 AMP MG 0.403509 0.825
147 VO4 ADP 0.403226 0.860759
148 ADP VO4 0.403226 0.860759
149 YLC 0.402878 0.823529
150 1VU 0.402597 0.763441
151 FA5 0.401515 0.886076
152 HAX 0.401316 0.771739
153 APU 0.4 0.923077
154 TXA 0.4 0.886076
155 A U 0.4 0.898734
156 4UU 0.4 0.948052
157 AFH 0.4 0.843373
158 CAJ 0.4 0.771739
159 AR6 AR6 0.4 0.871795
Similar Binding Sites (Proteins are less than 50% similar to leader)
Pocket No.: 1; Query (leader) PDB : 2GLX; Ligand: NDP; Similar sites found: 367
This union binding pocket(no: 1) in the query (biounit: 2glx.bio1) has 26 residues
No: Leader PDB Ligand P-value (APoc) PS_Score (APoc) Sequence Similarity
1 5O4J PJL 0.001718 0.42978 0.729927
2 5O4J 9KH 0.00193 0.42894 0.729927
3 5O4J SAH 0.00193 0.42894 0.729927
4 4BVA T3 0.0005683 0.45612 1.20482
5 4BVA NDP 0.0003758 0.45435 1.20482
6 2V6G NAP 0.001487 0.42973 1.20482
7 3HVJ 705 0.005311 0.41392 1.35747
8 4XUC SAM 0.003213 0.41969 1.37615
9 4XUC 43G 0.003213 0.41969 1.37615
10 3QWI CUE 0.006714 0.41363 1.48148
11 3QWI NAP 0.005705 0.40687 1.48148
12 3CGD NAD 0.006146 0.43817 1.50602
13 3CGD FAD 0.006146 0.43817 1.50602
14 3CGD COA 0.006146 0.43817 1.50602
15 1OBB NAD 0.0006806 0.43418 1.50602
16 2AQJ FAD 0.008282 0.42253 1.50602
17 2AQJ TRP 0.007993 0.42253 1.50602
18 1V59 FAD 0.00742 0.4154 1.50602
19 1FEC FAD 0.007821 0.41527 1.50602
20 1I0Z NAI 0.0005847 0.41316 1.50602
21 3VPH NAD 0.0001296 0.42263 1.6129
22 3VPH OXM 0.0001065 0.4166 1.6129
23 3WBF NAP 0.0002421 0.43063 1.63934
24 3WBF API 0.0003928 0.40551 1.63934
25 1YJQ NAP 0.0004017 0.45602 1.65016
26 1LUA NAP 0.001795 0.40664 1.74216
27 9LDT NAD 0.00009664 0.47866 1.80723
28 1V6A TRE 0.001501 0.47482 1.80723
29 3NJ4 NAD 0.002465 0.47101 1.80723
30 3NJ4 AFX 0.002951 0.46726 1.80723
31 9LDB NAD 0.00009135 0.4346 1.80723
32 2B4R AES 0.001131 0.43322 1.80723
33 2B4R NAD 0.001796 0.42634 1.80723
34 4KP7 NAP 0.005002 0.42458 1.80723
35 3L4S NAD 0.0025 0.42173 1.80723
36 3L4S 3PG 0.002682 0.42173 1.80723
37 4KP7 1UQ 0.005372 0.41969 1.80723
38 2XVE FAD 0.01191 0.41611 1.80723
39 3T31 FAD 0.01058 0.41496 1.80723
40 3T31 DCQ 0.01139 0.41496 1.80723
41 4D04 NAP 0.0155 0.41223 1.80723
42 2XVF FAD 0.008179 0.40598 1.80723
43 4EUE NAI 0.008269 0.40018 1.80723
44 4E5N NAD 0.002617 0.4196 1.81818
45 2GCG NDP 0.001231 0.40395 1.81818
46 1P77 ATR 0.0001539 0.52362 1.83824
47 1CDO NAD 0.0003258 0.45053 2.10843
48 2O4C NAD 0.0004812 0.44993 2.10843
49 1V8B NAD 0.0008707 0.44589 2.10843
50 3BAZ NAP 0.0003505 0.43964 2.10843
51 3OJO NAD 0.000747 0.42856 2.10843
52 2Q1S NAI 0.005017 0.42097 2.10843
53 4PIV NDP 0.002581 0.41985 2.10843
54 1EBF NAD 0.002226 0.41358 2.10843
55 3ETG GLU 0.01273 0.41068 2.10843
56 4J36 1HR 0.009076 0.40985 2.10843
57 3UOY NAP 0.02076 0.40885 2.10843
58 3ETG GTP 0.01014 0.40865 2.10843
59 4J36 FAD 0.006479 0.40578 2.10843
60 1D1T NAD 0.0005548 0.40349 2.10843
61 2F1K NAP 0.00006989 0.46078 2.15054
62 1LTH NAD 0.0001154 0.46502 2.19436
63 2QZZ NAP 0.002024 0.43163 2.20126
64 2QZZ EMF 0.002151 0.43163 2.20126
65 5L4S 6KX 0.008902 0.40442 2.20126
66 5L4S NAP 0.008902 0.40442 2.20126
67 5THQ NDP 0.00637 0.40236 2.20588
68 1NYT NAP 0.001111 0.42033 2.21402
69 5KKA 6V0 0.0006898 0.40045 2.24359
70 5GT9 NAP 0.001754 0.42677 2.28137
71 4OSP NAP 0.0049 0.40571 2.28137
72 4J4H NAI 0.001278 0.44949 2.3166
73 4J4H 1J1 0.001278 0.44949 2.3166
74 4JK3 NAD 0.0005409 0.44162 2.3166
75 2VT3 ATP 0.00004296 0.42872 2.32558
76 3Q3C NAD 0.004366 0.40185 2.34114
77 5AHO TLA 0.00314 0.46798 2.40964
78 2VHW NAI 0.0007112 0.44958 2.40964
79 1P31 EPU 0.002203 0.43093 2.40964
80 1BZL FAD 0.01344 0.42912 2.40964
81 2WPF WPF 0.01605 0.42632 2.40964
82 2WPF FAD 0.01634 0.42423 2.40964
83 1R6D DAU 0.01137 0.41211 2.40964
84 1R6D NAD 0.01186 0.41204 2.40964
85 1KEW NAD 0.0152 0.40579 2.40964
86 1KNR FAD 0.01081 0.40381 2.40964
87 3IHG FAD 0.007309 0.40118 2.40964
88 1DJN ADP 0.003586 0.40118 2.40964
89 1NVT NAP 0.0005906 0.43665 2.43902
90 3U4C NDP 0.004832 0.40596 2.4911
91 1SAY PYR 0.002181 0.42672 2.49307
92 4FC7 NAP 0.006475 0.41526 2.52708
93 4FC7 COA 0.006475 0.41526 2.52708
94 3O26 NDP 0.004352 0.40917 2.57235
95 5AYV KPL 0.0009536 0.44299 2.589
96 5AYV NAP 0.001721 0.41449 2.589
97 1X7D ORN 0.0007835 0.44903 2.71084
98 1MV8 NAD 0.000418 0.44615 2.71084
99 1CF2 NAP 0.000479 0.44376 2.71084
100 1X7D NAD 0.0006336 0.44202 2.71084
101 5H81 NAP 0.0008109 0.43824 2.71084
102 1MUU NAD 0.0004033 0.43756 2.71084
103 1REO FAD 0.002235 0.43202 2.71084
104 5VKT NAP 0.0002666 0.42397 2.71084
105 5FJN BE2 0.005509 0.42102 2.71084
106 5FJN FAD 0.004756 0.42102 2.71084
107 1KOL NAD 0.003414 0.42092 2.71084
108 5BUK FAD 0.006612 0.4167 2.71084
109 1GQ2 NAP 0.0008192 0.4106 2.71084
110 2GV8 NDP 0.003255 0.40697 2.71084
111 5EB4 FAD 0.01182 0.40215 2.71084
112 2GVC FAD 0.008734 0.40037 2.71084
113 2HJR APR 0.001062 0.42984 2.7439
114 5GZ6 NDP 0.001496 0.43075 2.76074
115 5GZ6 7C3 0.002271 0.41637 2.76074
116 2Q46 NAP 0.004579 0.40692 2.7668
117 4TQG NDP 0.004517 0.40716 2.78638
118 1A5Z NAD 0.002979 0.41474 2.82132
119 2YVF NAD 0.005316 0.43253 3.01205
120 2YVF FAD 0.005255 0.43207 3.01205
121 2YYY NAP 0.001375 0.42828 3.01205
122 4PVD NDP 0.002027 0.41841 3.01205
123 1I2B NAD 0.01184 0.41279 3.01205
124 1VKO NAD 0.000437 0.40976 3.01205
125 5JCM NAD 0.01965 0.40877 3.01205
126 2E5V FAD 0.009908 0.4082 3.01205
127 5JCM FAD 0.01999 0.40783 3.01205
128 5JCM ISD 0.02061 0.40783 3.01205
129 1XHC FAD 0.009103 0.40296 3.01205
130 2RGJ FAD 0.008559 0.40074 3.01205
131 1I36 NAP 0.002136 0.41012 3.0303
132 1U7T TDT 0.004209 0.42233 3.06513
133 1VM6 NAD 0.002033 0.41679 3.07018
134 5UAV TFB 0.000238 0.46958 3.10559
135 5UAV NDP 0.000238 0.46958 3.10559
136 1EZ4 NAD 0.00004264 0.46885 3.14465
137 4E13 NAD 0.0002968 0.4353 3.18021
138 5M67 3D1 0.0008603 0.45884 3.31325
139 5M67 NAD 0.0009272 0.45742 3.31325
140 5M67 ADE 0.001456 0.44886 3.31325
141 1J49 NAD 0.0009747 0.43438 3.31325
142 1YKJ FAD 0.006321 0.42982 3.31325
143 1GY8 NAD 0.003604 0.41386 3.31325
144 4NTD FAD 0.01077 0.40192 3.31325
145 1VI2 NAD 0.001866 0.42319 3.33333
146 1GAD NAD 0.001761 0.42088 3.33333
147 4IF4 BEF 0.0195 0.40726 3.36538
148 2BRY FAD 0.002827 0.42079 3.42052
149 3B1F NAD 0.0002018 0.46335 3.44828
150 4RDH AMP 0.006664 0.41677 3.47222
151 1NPD NAD 0.001967 0.41573 3.47222
152 4D3F NAP 0.001074 0.43317 3.54839
153 1SC6 NAD 0.0007208 0.4441 3.61446
154 1N1G BCP 0.0009819 0.44246 3.61446
155 1U3U BNF 0.002439 0.43349 3.61446
156 1Y1P NMN AMP PO4 0.001381 0.42518 3.61446
157 2HQM FAD 0.007746 0.41191 3.61446
158 3FWN ATR 0.006432 0.40708 3.61446
159 1R37 NAD 0.006592 0.40664 3.61446
160 4TM3 FAD 0.02446 0.40615 3.61446
161 3KLJ FAD 0.006508 0.4057 3.61446
162 2DKH FAD 0.00657 0.40553 3.61446
163 2DKH 3HB 0.01201 0.40088 3.61446
164 1EDO NAP 0.004052 0.41304 3.68852
165 1JAY NAP 0.0006025 0.44361 3.77358
166 2DC1 NAD 0.001299 0.42778 3.81356
167 4RQU NAD 0.0003114 0.45463 3.91566
168 5CAE COA 0.0005422 0.43813 3.91566
169 3DAG FEG 0.003596 0.40681 3.91566
170 3PIJ FRU 0.02871 0.40525 3.91566
171 4XZ3 COA 0.005 0.40237 3.91566
172 3QVP FAD 0.01405 0.40163 3.91566
173 1RYI FAD 0.001647 0.43978 3.9267
174 1J5P NAD 0.0009265 0.41478 3.95257
175 1SOW NAD 0.0003216 0.45861 3.96341
176 5JE8 NAD 0.001586 0.41429 3.97351
177 3ORF NAD 0.006418 0.40223 3.98406
178 1WMA AB3 0.006494 0.41613 3.98551
179 4D79 ATP 0.01081 0.40035 3.98551
180 5OFW 9TW 0.006276 0.44544 4.03587
181 1F06 2NP 0.001904 0.42918 4.0625
182 1F06 NDP 0.001904 0.42918 4.0625
183 2AG8 NAP 0.0006518 0.4223 4.18251
184 1GUZ NAD 0.0003394 0.4531 4.19355
185 1UXG NAD 0.0000875 0.49054 4.20712
186 4FWE FAD 0.003297 0.42883 4.21687
187 1BW9 NAD 0.002273 0.41962 4.21687
188 1BXG NAD 0.002387 0.41554 4.21687
189 5FI3 NAP 0.0005733 0.4129 4.21687
190 2A92 NAI 0.0003336 0.45795 4.36137
191 1KYQ NAD 0.0002617 0.41973 4.37956
192 5UAO FAD 0.003801 0.42114 4.43623
193 1P0F NAP 0.001057 0.43721 4.51807
194 1H82 GZZ 0.01053 0.41917 4.51807
195 3ABI NAD 0.0004369 0.41508 4.51807
196 1YS4 NAP 0.001873 0.40783 4.51807
197 1H82 FAD 0.01797 0.40609 4.51807
198 1U8X NAD 0.002472 0.40201 4.51807
199 1G0N NDP 0.0035 0.42267 4.59364
200 1G0N PHH 0.004174 0.42249 4.59364
201 5N53 8NB 0.007573 0.43922 4.61538
202 4PLG NAI 0.0002219 0.47215 4.79042
203 4PLG OXM 0.03464 0.40427 4.79042
204 1NVM NAD 0.00008632 0.43541 4.81928
205 2C29 NAP 0.005477 0.41932 4.81928
206 3H9E NAD 0.0008896 0.4191 4.81928
207 2C29 DQH 0.005739 0.41845 4.81928
208 3B20 NAD 0.002756 0.41146 4.81928
209 2D2I NAP 0.003305 0.4067 4.81928
210 1Y8Q ATP 0.004348 0.40485 4.81928
211 4K28 NAD 0.0001613 0.45287 4.83271
212 1LDM NAD 0.0003794 0.41896 4.86322
213 1T26 NAI 0.000197 0.4804 4.96894
214 2PT9 2MH 0.003007 0.42089 4.98442
215 3CTY FAD 0.006424 0.41724 5.01567
216 4YCA NDP 0.0003561 0.43377 5.10204
217 4EDF UPG 0.00428 0.42754 5.12048
218 4HXY NDP 0.001874 0.42558 5.12048
219 5MDH NAD 0.002546 0.4159 5.12048
220 2V3A FAD 0.008936 0.40537 5.12048
221 1SB8 UD2 0.01681 0.40459 5.12048
222 1SB8 NAD 0.01478 0.40401 5.12048
223 3S5W FAD 0.0078 0.40001 5.12048
224 1ZEM NAD 0.001438 0.42444 5.34351
225 2PV7 NAD 0.0003255 0.43005 5.36913
226 2CDC XYP 0.005124 0.43524 5.42169
227 1UP7 NAD 0.0008464 0.43211 5.42169
228 2CDC XYS 0.007461 0.42786 5.42169
229 2CDC NAP 0.007461 0.42786 5.42169
230 3SQP FAD 0.03427 0.42576 5.42169
231 3GD4 NAD 0.02952 0.40506 5.42169
232 3GD4 FAD 0.02319 0.40177 5.42169
233 1SQL GUN 0.02368 0.41493 5.47945
234 1O6Z NAD 0.000421 0.44253 5.61056
235 1LDN NAD 0.0001556 0.47013 5.6962
236 4W6Z 8ID 0.0009179 0.44492 5.72289
237 1PL6 572 0.0007399 0.44363 5.72289
238 2DFV NAD 0.001214 0.42897 5.72289
239 5LD5 NAD 0.001172 0.4281 5.72289
240 3LAD FAD 0.004615 0.42159 5.72289
241 1PL6 NAD 0.0007711 0.41981 5.72289
242 1HDG NAD 0.002086 0.40994 5.72289
243 2ZAT NAP 0.005749 0.4042 5.76923
244 1ZQ9 SAM 0.002761 0.42659 5.96491
245 2VZ0 NAP 0.0227 0.41138 5.97015
246 2VZ0 D64 0.0227 0.41138 5.97015
247 1WDK NAD 0.0003409 0.44203 6.0241
248 2DBZ NAP 0.001074 0.43266 6.0241
249 3V1Y NAD 0.0008744 0.41948 6.0241
250 2RAB FAD 0.006079 0.41827 6.0241
251 2RAB NAD 0.01252 0.41827 6.0241
252 4YNU FAD 0.01035 0.40825 6.0241
253 4MIG G3F 0.01494 0.40458 6.0241
254 4YNU LGC 0.01759 0.40147 6.0241
255 1CER NAD 0.002217 0.40448 6.0423
256 1U1I NAD 0.0005499 0.4517 6.3253
257 2PZM NAD 0.00966 0.40868 6.3253
258 2PZM UDP 0.00966 0.40868 6.3253
259 4CNK FAD 0.009017 0.40521 6.3253
260 3SJ7 NDP 0.004895 0.40573 6.34921
261 2EV9 NAP 0.0004227 0.4537 6.46388
262 2EV9 SKM 0.0004227 0.40703 6.46388
263 3O03 NAP 0.001022 0.43045 6.52921
264 1C3V NDP 0.0006471 0.40634 6.53061
265 3H4V DVP 0.008726 0.40968 6.59722
266 3H4V NAP 0.01141 0.40374 6.59722
267 1E5Q NDP 0.0001924 0.43304 6.62651
268 2VYN NAD 0.001478 0.427 6.62651
269 1QO8 FAD 0.005521 0.41823 6.62651
270 5D4V SAH 0.002361 0.41894 6.71642
271 2HK9 NAP 0.00007736 0.47578 6.90909
272 2HK9 ATR 0.0000328 0.42557 6.90909
273 4ZGS NAD 0.0009695 0.42803 6.92771
274 3UCL NAP 0.03259 0.40041 6.92771
275 3GGO NAI 0.0001532 0.48391 7.00637
276 3GGO ENO 0.0001532 0.48391 7.00637
277 5ITV NAI 0.00113 0.43464 7.05882
278 1O0S NAI 0.0004085 0.44676 7.22892
279 2FZW NAD 0.002294 0.43562 7.22892
280 1F8F NAD 0.002586 0.41257 7.22892
281 1GET FAD 0.01738 0.41179 7.22892
282 4GUT FAD 0.003965 0.42811 7.25806
283 2YVJ NAI 0.001706 0.43583 7.33945
284 2WSB NAD 0.01205 0.40178 7.48031
285 2IZ1 ATR 0.001692 0.47236 7.53012
286 2GZ3 NAP 0.001796 0.44488 7.53012
287 1K3T BRZ 0.004755 0.41138 7.53012
288 3ULK NDP 0.002363 0.40493 7.53012
289 1AE1 NAP 0.00111 0.43767 7.69231
290 5T9E NAP 0.0006652 0.43799 7.74908
291 4XB2 HSE 0.0006597 0.44569 7.76119
292 4XB2 NDP 0.0003427 0.44189 7.76119
293 2G5C NAD 0.0004044 0.45154 7.82918
294 2RGO FAD 0.001074 0.44326 7.83133
295 4MP8 NAD 0.001475 0.43744 7.83133
296 3ZNN 4WL 0.003791 0.43626 7.83133
297 3ZNN FAD 0.003791 0.43626 7.83133
298 2RGH FAD 0.003145 0.42674 7.83133
299 2DTX BMA 0.002308 0.43142 7.95455
300 2YN4 39J 0.0129 0.4281 8.05085
301 1J0X NAD 0.001033 0.45054 8.13253
302 1YY5 FAD 0.008195 0.41266 8.13253
303 4AT0 FAD 0.01327 0.40605 8.13253
304 1RSG FAD 0.01103 0.40529 8.13253
305 4IDC 1XX 0.006726 0.40511 8.13253
306 4IDC NDP 0.006726 0.40511 8.13253
307 1GR0 NAD 0.0001462 0.47571 8.43373
308 1LVL NAD 0.002163 0.42395 8.43373
309 3GFB NAD 0.001234 0.40866 8.43373
310 1RP0 AHZ 0.002201 0.42403 8.80282
311 1RM4 NDP 0.005252 0.40166 8.90208
312 3WLE NAD 0.00192 0.43144 9.03614
313 3KB6 NAD 0.001584 0.42428 9.03614
314 3CIF G3H 0.0009412 0.44323 9.33735
315 3CIF NAD 0.0008463 0.43689 9.33735
316 2GAG NAD 0.007346 0.40796 9.33735
317 2GAG FOA 0.01603 0.40084 9.33735
318 2GAG FAD 0.01603 0.40084 9.33735
319 1GV0 NAD 0.0003746 0.4529 9.35484
320 3WV8 ATP 0.004422 0.41408 9.63303
321 3QV1 NAD 0.002705 0.40551 9.7561
322 2BH9 NAP 0.0002051 0.4865 9.93976
323 1DSS NAD 0.001057 0.42822 9.93976
324 3CMC NAD 0.01903 0.40999 9.93976
325 2DT5 NAD 0.000009693 0.47934 10.4265
326 5X20 NAD 0.001084 0.42779 10.5769
327 1O94 ADP 0.003622 0.40511 10.625
328 2AE2 NAP 0.0005346 0.45957 10.7692
329 2NU8 COA 0.0002344 0.45631 10.8434
330 1H9A NAP 0.0004056 0.45722 11.1446
331 4BV6 FAD 0.006152 0.41526 11.1446
332 3GDN FAD 0.01155 0.40442 11.747
333 3GDN HBX 0.01632 0.40442 11.747
334 1OMO NAD 0.0001786 0.45743 12.4224
335 4GKV NAD 0.000538 0.4521 12.5
336 1LC3 NAD 0.00003073 0.4549 12.585
337 1HYH NAD 0.0001737 0.42623 12.945
338 1LSS NAD 0.0003297 0.43201 13.5714
339 5L53 NAP 0.006182 0.40153 13.5802
340 3RNM FAD 0.007685 0.41297 13.7931
341 1D4D FAD 0.008491 0.4111 13.8554
342 5BSH PRO 0.00115 0.4357 14.8014
343 2IXB NAD 0.0000003303 0.51535 15.0602
344 2IXB A2G 0.0000005217 0.46675 15.0602
345 3AD8 NAD 0.006137 0.40794 15.1515
346 3AD8 FAD 0.02672 0.40325 15.1515
347 1HYE NAP 0.0004728 0.43628 15.3355
348 5KVS NAP 0.0007169 0.43328 15.3614
349 3L8H FX1 0.02203 0.41348 16.7598
350 3OA2 NAD 0.00000005359 0.55972 18.5535
351 1JNR FAD 0.02678 0.40702 18.6667
352 2VVM FAD 0.008241 0.40886 18.9759
353 1DXY NAD 0.0006057 0.43964 19.2771
354 5L95 AMP 0.002891 0.42208 25
355 2F5Z FAD 0.007916 0.41241 26.5625
356 5N2I NAP 0.0001858 0.44322 27.1552
357 3O9Z NAD 0.00000002958 0.47118 27.2436
358 3O9Z AKG 0.00000006936 0.46529 27.2436
359 5A04 NDP 0.00000002862 0.43504 41.8675
360 5A04 BGC 0.00000003934 0.41669 41.8675
361 1ZH8 NAP 0.00000002551 0.61909 42.1687
362 3RC1 NAP 0.00000002066 0.51851 42.1687
363 3RC1 TLO 0.0000001405 0.50981 42.1687
364 1H6C NDP 0.00000004784 0.62687 46.6867
365 1H6C SIN 0.000000265 0.59886 46.6867
366 1RYD NDP 0.00000005313 0.50549 46.6867
367 4L8V NAP 0.0000004148 0.57417 46.988
Pocket No.: 2; Query (leader) PDB : 2GLX; Ligand: NDP; Similar sites found: 9
This union binding pocket(no: 2) in the query (biounit: 2glx.bio3) has 26 residues
No: Leader PDB Ligand P-value (APoc) PS_Score (APoc) Sequence Similarity
1 1G5N UAP SGN IDS SGN 0.03312 0.40074 1.88679
2 2BKA NDP 0.006691 0.40017 2.06612
3 4X1Z FUC GAL NDG 0.0328 0.41622 2.10843
4 1GQ2 OXL 0.03165 0.40278 2.71084
5 1X87 NAD 0.003835 0.40047 3.01205
6 4KQW NAP 0.00838 0.40227 4.51807
7 4XDY NAI 0.002791 0.40106 4.51807
8 3WMX THR 0.03774 0.40938 5.12048
9 1GET NAP 0.02064 0.40953 7.22892
Pocket No.: 3; Query (leader) PDB : 2GLX; Ligand: NDP; Similar sites found: 4
This union binding pocket(no: 3) in the query (biounit: 2glx.bio5) has 26 residues
No: Leader PDB Ligand P-value (APoc) PS_Score (APoc) Sequence Similarity
1 1SQS TLA 0.03298 0.40464 1.65289
2 4RM0 FUC NAG GAL 0.02628 0.41433 2.53165
3 3VMW ADA ADA ADA 0.02921 0.40665 3.37423
4 3FGZ BEF 0.0468 0.4024 11.7188
Pocket No.: 4; Query (leader) PDB : 2GLX; Ligand: NDP; Similar sites found: 4
This union binding pocket(no: 4) in the query (biounit: 2glx.bio2) has 26 residues
No: Leader PDB Ligand P-value (APoc) PS_Score (APoc) Sequence Similarity
1 2ZE3 AKG 0.02982 0.40669 4
2 1WP4 NDP 0.002148 0.40132 7.61246
3 2CVZ NDP 0.003066 0.40045 7.61246
4 4UEC MGT 0.03467 0.41404 15.3846
Pocket No.: 5; Query (leader) PDB : 2GLX; Ligand: NDP; Similar sites found: 3
This union binding pocket(no: 5) in the query (biounit: 2glx.bio4) has 26 residues
No: Leader PDB Ligand P-value (APoc) PS_Score (APoc) Sequence Similarity
1 2CDU FAD 0.0102 0.40087 2.40964
2 4MDB RLT 0.01963 0.40962 3.55556
3 3EF0 ALF 0.02046 0.41133 4.81928
Pocket No.: 6; Query (leader) PDB : 2GLX; Ligand: NDP; Similar sites found: 3
This union binding pocket(no: 6) in the query (biounit: 2glx.bio6) has 26 residues
No: Leader PDB Ligand P-value (APoc) PS_Score (APoc) Sequence Similarity
1 1M2W NAD 0.006268 0.40128 2.63692
2 5CX6 CDP 0.03367 0.40227 3.31325
3 5AOG IAC 0.04071 0.41366 4.56026
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