-->
Receptor
PDB id Resolution Class Description Source Keywords
2FV0 1.91 Å EC: 3.2.1.- UGL_D88N/DGLCA-GLC-RHA-GLC BACILLUS SP. ALPHA6/ALPHA6-BARREL HYDROLASE
Ref.: SUBSTRATE RECOGNITION BY UNSATURATED GLUCURONYL HYD FROM BACILLUS SP. GL1 BIOCHEM.BIOPHYS.RES.COMMUN. V. 344 253 2006
Ligand
Ligand Chain:Residue Validity Ligand Warnings Binding Data NGL Viewer Molecular Weight (Da) Formula SMILES
BGC RAM BGC GAD A:401;
Valid;
none;
submit data
645.54 n/a O=C([...
View in 3D viewer
90% Homology Family
Leader
PDB id Resolution Class Description Source Keywords
2FV1 1.73 Å EC: 3.2.1.- UGL_D88N/DGLCA-GLCNAC BACILLUS SP. ALPHA6/ALPHA6-BARREL HYDROLASE
Ref.: SUBSTRATE RECOGNITION BY UNSATURATED GLUCURONYL HYD FROM BACILLUS SP. GL1 BIOCHEM.BIOPHYS.RES.COMMUN. V. 344 253 2006
Members (3)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 17 families.
1 2FV0 - BGC RAM BGC GAD n/a n/a
2 2AHG - UCD C14 H21 N O11 CC(=O)N[C@....
3 2FV1 - GAD NDG n/a n/a
70% Homology Family (3)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 17 families.
1 2FV0 - BGC RAM BGC GAD n/a n/a
2 2AHG - UCD C14 H21 N O11 CC(=O)N[C@....
3 2FV1 - GAD NDG n/a n/a
50% Homology Family (4)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 11 families.
1 2FV0 - BGC RAM BGC GAD n/a n/a
2 2AHG - UCD C14 H21 N O11 CC(=O)N[C@....
3 2FV1 - GAD NDG n/a n/a
4 3ANK - NG6 GCD n/a n/a
Polypharmacology
Similar Ligands
Ligand no: 1; Ligand: BGC RAM BGC GAD; Similar ligands found: 22
No: Ligand ECFP6 Tc MDL keys Tc
1 BGC RAM BGC GAD 1 1
2 NAG GAD 0.494624 0.76
3 GAD NDG 0.494624 0.76
4 NGA GCD 0.494624 0.76
5 GCD NGA 0.494624 0.76
6 RAM GAD 0.471264 0.794872
7 MAW LGU BEM BEM 0.4375 0.775
8 MAW MAV GCU 0.4375 0.775
9 BEM MAV LGU MAV 0.4375 0.775
10 MAW BEM BEM BEM 0.4375 0.775
11 HS2 0.42268 0.72
12 AQA RAM GTR 0.42 0.775
13 BEM MAV 0.417582 0.75
14 GLA NAG GAL FUC 0.413462 0.7
15 GAL NAG GAL FUC 0.413462 0.7
16 NAG GAL GAL NAG GAL 0.411765 0.673077
17 LB2 0.409639 0.846154
18 M3M 0.409639 0.846154
19 NGR 0.409639 0.846154
20 MAN GLC 0.409639 0.846154
21 UCD 0.408163 0.74
22 ABC 0.405172 0.75
Similar Binding Sites (Proteins are less than 50% similar to leader)
Pocket No.: 1; Query (leader) PDB : 2FV1; Ligand: GAD NDG; Similar sites found with APoc: 11
This union binding pocket(no: 1) in the query (biounit: 2fv1.bio2) has 15 residues
No: Leader PDB Ligand Sequence Similarity
1 3KA2 2NC 0.985222
2 3U2U UDP 2.28137
3 2BVD ISX 2.4735
4 1FO3 KIF 3.44828
5 1X9D SMD 3.44828
6 5AAV GW5 3.57143
7 5ESO TDP 5.03979
8 5ESO ISC 5.03979
9 1QM5 GLC GLC GLC PO4 SGC GLC 5.30504
10 2CER PGI 6.1008
11 3SM2 478 12.8788
APoc FAQ
Feedback