Receptor
PDB id Resolution Class Description Source Keywords
2FB3 2.35 Å NON-ENZYME: BINDING STRUCTURE OF MOAA IN COMPLEX WITH 5'-GTP STAPHYLOCOCCUS AUREUS S-ADENOSYLMETHIONINE TIM BARREL [4FE-4S] CLUSTERS 5-prime -GTPDEOXYADENOSINE LIGAND BINDING PROTEIN
Ref.: BINDING OF 5'-GTP TO THE C-TERMINAL FES CLUSTER OF RADICAL S-ADENOSYLMETHIONINE ENZYME MOAA PROVIDES I INTO ITS MECHANISM PROC.NATL.ACAD.SCI.USA V. 103 6829 2006
Ligand
Ligand Chain:Residue Validity Ligand Warnings Binding Data NGL Viewer Molecular Weight (Da) Formula SMILES
5AD A:501;
Valid;
none;
submit data
251.242 C10 H13 N5 O3 C[C@@...
GTP A:404;
Valid;
none;
Kd = 0.29 uM
523.18 C10 H16 N5 O14 P3 c1nc2...
MET A:500;
B:501;
Valid;
Valid;
none;
none;
submit data
149.211 C5 H11 N O2 S CSCC[...
POP B:404;
Invalid;
none;
submit data
175.959 H2 O7 P2 O[P@@...
SF4 A:401;
A:402;
B:401;
B:402;
Part of Protein;
Part of Protein;
Part of Protein;
Part of Protein;
none;
none;
none;
none;
submit data
351.64 Fe4 S4 [S]12...
SO4 A:403;
B:403;
Invalid;
Invalid;
none;
none;
submit data
96.063 O4 S [O-]S...
View in 3D viewer
90% Homology Family
Leader
PDB id Resolution Class Description Source Keywords
2FB3 2.35 Å NON-ENZYME: BINDING STRUCTURE OF MOAA IN COMPLEX WITH 5'-GTP STAPHYLOCOCCUS AUREUS S-ADENOSYLMETHIONINE TIM BARREL [4FE-4S] CLUSTERS 5-prime -GTPDEOXYADENOSINE LIGAND BINDING PROTEIN
Ref.: BINDING OF 5'-GTP TO THE C-TERMINAL FES CLUSTER OF RADICAL S-ADENOSYLMETHIONINE ENZYME MOAA PROVIDES I INTO ITS MECHANISM PROC.NATL.ACAD.SCI.USA V. 103 6829 2006
Members (3)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 473 families.
1 2FB2 - SAM C15 H22 N6 O5 S C[S@@+](CC....
2 1TV8 - SAM C15 H22 N6 O5 S C[S@@+](CC....
3 2FB3 Kd = 0.29 uM GTP C10 H16 N5 O14 P3 c1nc2c(n1[....
70% Homology Family (3)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 355 families.
1 2FB2 - SAM C15 H22 N6 O5 S C[S@@+](CC....
2 1TV8 - SAM C15 H22 N6 O5 S C[S@@+](CC....
3 2FB3 Kd = 0.29 uM GTP C10 H16 N5 O14 P3 c1nc2c(n1[....
50% Homology Family (3)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 272 families.
1 2FB2 - SAM C15 H22 N6 O5 S C[S@@+](CC....
2 1TV8 - SAM C15 H22 N6 O5 S C[S@@+](CC....
3 2FB3 Kd = 0.29 uM GTP C10 H16 N5 O14 P3 c1nc2c(n1[....
Polypharmacology
Similar Ligands
Ligand no: 1; Ligand: 5AD; Similar ligands found: 196
No: Ligand ECFP6 Tc MDL keys Tc
1 5AD 1 1
2 XYA 0.672727 0.854839
3 ADN 0.672727 0.854839
4 RAB 0.672727 0.854839
5 5N5 0.649123 0.854839
6 Y3J 0.649123 0.929825
7 MTA 0.639344 0.857143
8 5CD 0.637931 0.868852
9 A4D 0.637931 0.854839
10 EP4 0.633333 0.830769
11 M2T 0.622951 0.80597
12 DTA 0.596774 0.815385
13 3DH 0.59375 0.857143
14 CC5 0.568965 0.883333
15 7D7 0.568965 0.793651
16 S4M 0.565217 0.72
17 NEC 0.558824 0.885246
18 AOC 0.558824 0.828125
19 AMP 0.552239 0.768116
20 ZAS 0.552239 0.791045
21 A 0.552239 0.768116
22 A3N 0.550725 0.815385
23 ABM 0.550725 0.771429
24 SRA 0.544118 0.726027
25 6RE 0.544118 0.757143
26 3AM 0.537313 0.753623
27 AMP MG 0.536232 0.746479
28 DSH 0.536232 0.768116
29 MAO 0.535211 0.710526
30 3AD 0.532258 0.83871
31 RP1 0.529412 0.722222
32 SP1 0.529412 0.722222
33 J7C 0.528571 0.768116
34 A2D 0.528571 0.746479
35 5AS 0.527778 0.650602
36 GJV 0.521127 0.746479
37 SON 0.520548 0.716216
38 A3G 0.514286 0.80303
39 AP2 0.513889 0.716216
40 BA3 0.513889 0.746479
41 A12 0.513889 0.716216
42 AU1 0.513514 0.726027
43 M33 0.513514 0.760563
44 MHZ 0.513514 0.710526
45 ADP 0.506849 0.746479
46 B4P 0.506849 0.746479
47 AP5 0.506849 0.746479
48 A7D 0.5 0.80303
49 AN2 0.5 0.736111
50 SAM 0.5 0.75
51 PRX 0.5 0.75
52 2AM 0.5 0.742857
53 SA8 0.493506 0.771429
54 AD9 0.493506 0.726027
55 CA0 0.493333 0.726027
56 ADP MG 0.493333 0.736111
57 ADX 0.493333 0.670886
58 CMP 0.493151 0.776119
59 A3P 0.493151 0.742857
60 2BA 0.493151 0.764706
61 ACP 0.486842 0.726027
62 BEF ADP 0.486842 0.716216
63 SFG 0.486842 0.828125
64 5X8 0.486842 0.815385
65 ATP 0.486842 0.746479
66 50T 0.486842 0.736111
67 A3T 0.486842 0.857143
68 ADP BEF 0.486842 0.716216
69 7D5 0.485294 0.684932
70 SMM 0.481481 0.72
71 ANP 0.481013 0.726027
72 AR6 0.480519 0.746479
73 5FA 0.480519 0.746479
74 AQP 0.480519 0.746479
75 APC 0.480519 0.716216
76 APR 0.480519 0.746479
77 A3S 0.48 0.815385
78 OVE 0.478873 0.712329
79 5AL 0.475 0.760563
80 EEM 0.475 0.75
81 AAT 0.475 0.746479
82 SAP 0.474359 0.706667
83 RBY 0.474359 0.716216
84 ADV 0.474359 0.716216
85 A5D 0.474359 0.815385
86 ADP PO3 0.474359 0.768116
87 AGS 0.474359 0.706667
88 QQX 0.471429 0.708333
89 5F1 0.469697 0.78125
90 A5A 0.469136 0.675
91 SAI 0.468354 0.779412
92 ATP MG 0.468354 0.736111
93 G5A 0.468354 0.630952
94 SAH 0.468354 0.791045
95 QQY 0.464789 0.71831
96 103 0.464789 0.764706
97 ACK 0.464789 0.761194
98 S7M 0.463415 0.75
99 ANP MG 0.463415 0.706667
100 GAP 0.4625 0.726027
101 TAT 0.4625 0.716216
102 ACQ 0.4625 0.726027
103 3L1 0.461538 0.772727
104 3D1 0.461538 0.772727
105 VMS 0.457831 0.658537
106 54H 0.457831 0.658537
107 52H 0.457831 0.650602
108 PAP 0.455696 0.732394
109 NVA 2AD 0.455696 0.791045
110 A2P 0.453333 0.753623
111 NOC 0.453125 0.790323
112 5I5 0.453125 0.913793
113 MAP 0.452381 0.706667
114 DAL AMP 0.452381 0.760563
115 53H 0.452381 0.650602
116 TSB 0.452381 0.666667
117 ATF 0.451219 0.716216
118 ALF ADP 0.451219 0.706667
119 ADP ALF 0.451219 0.706667
120 2VA 0.448718 0.830769
121 5SV 0.447059 0.710526
122 8QN 0.447059 0.760563
123 SSA 0.445783 0.630952
124 SRP 0.445783 0.716216
125 ADP VO4 0.445783 0.736111
126 VO4 ADP 0.445783 0.736111
127 LSS 0.44186 0.635294
128 PAJ 0.44186 0.701299
129 0UM 0.44186 0.760563
130 7D3 0.44 0.666667
131 PPS 0.439024 0.65
132 1ZZ 0.438202 0.683544
133 NVA LMS 0.436782 0.635294
134 62X 0.436782 0.72
135 A22 0.435294 0.736111
136 5CA 0.435294 0.630952
137 D3Y 0.435294 0.791045
138 KB1 0.433333 0.736111
139 MYR AMP 0.433333 0.683544
140 ARJ 0.432836 0.774194
141 VRT 0.432099 0.794118
142 SO8 0.432099 0.818182
143 OAD 0.431818 0.75
144 K15 0.431818 0.739726
145 LEU LMS 0.431818 0.635294
146 25A 0.430233 0.746479
147 GEK 0.430233 0.757143
148 S8M 0.430233 0.757143
149 OOB 0.430233 0.736111
150 WAQ 0.426966 0.697368
151 3NZ 0.426966 0.782609
152 GSU 0.426966 0.630952
153 ADZ 0.425926 0.618182
154 DSZ 0.425287 0.630952
155 ADQ 0.425287 0.726027
156 4AD 0.425287 0.706667
157 AMO 0.425287 0.716216
158 NSS 0.425287 0.630952
159 A1R 0.425287 0.697368
160 2A5 0.425 0.68
161 TXA 0.422222 0.739726
162 SXZ 0.422222 0.75
163 3OD 0.422222 0.75
164 ME8 0.422222 0.683544
165 PTJ 0.422222 0.710526
166 BIS 0.422222 0.697368
167 AHX 0.420455 0.688312
168 DLL 0.420455 0.736111
169 00A 0.420455 0.697368
170 ATR 0.419753 0.742857
171 7D4 0.417722 0.666667
172 TAD 0.416667 0.679487
173 A6D 0.41573 0.716216
174 ADP BMA 0.41573 0.726027
175 3UK 0.41573 0.726027
176 26A 0.411765 0.787879
177 AFX 0.411765 0.716418
178 P5A 0.411111 0.602273
179 LAD 0.411111 0.679487
180 PR8 0.411111 0.670886
181 A A 0.411111 0.746479
182 KAA 0.411111 0.609195
183 V3L 0.409639 0.746479
184 AMP NAD 0.409091 0.739726
185 YAP 0.408602 0.706667
186 0XU 0.407407 0.828125
187 NB8 0.406593 0.688312
188 FYA 0.406593 0.736111
189 JB6 0.406593 0.697368
190 YSA 0.404255 0.630952
191 TYR AMP 0.404255 0.716216
192 ZDA 0.402439 0.742857
193 25L 0.402174 0.736111
194 4UV 0.4 0.706667
195 A A A 0.4 0.736111
196 101 0.4 0.708333
Ligand no: 2; Ligand: GTP; Similar ligands found: 147
No: Ligand ECFP6 Tc MDL keys Tc
1 GTP 1 1
2 GP3 0.921053 0.973684
3 GDP 0.909091 1
4 GSP 0.853659 0.948718
5 GNH 0.82716 0.986667
6 G1R 0.819277 0.986667
7 GAV 0.811765 0.961039
8 GNP 0.809524 0.973684
9 GCP 0.797619 0.973684
10 5GP 0.797468 0.986486
11 G 0.797468 0.986486
12 GMV 0.764706 0.973684
13 G2R 0.764045 0.961039
14 G5P 0.755319 0.973684
15 GTG 0.752688 0.936709
16 G2P 0.747126 0.961039
17 G3A 0.744681 0.973684
18 GDD 0.741935 0.961039
19 GKE 0.741935 0.961039
20 GDC 0.741935 0.961039
21 0O2 0.736264 0.986486
22 GP2 0.729412 0.961039
23 6CK 0.726316 0.936709
24 Y9Z 0.723404 0.902439
25 GPG 0.717391 0.961039
26 GFB 0.715789 0.961039
27 GDR 0.715789 0.961039
28 GDP MG 0.712644 0.923077
29 GDP BEF 0.704545 0.9
30 GPD 0.704082 0.925
31 JB2 0.693878 0.961039
32 GKD 0.693878 0.961039
33 GCP G 0.692308 0.935065
34 GDX 0.686869 0.973684
35 ALF 5GP 0.685393 0.888889
36 GTP MG 0.681319 0.923077
37 BEF GDP 0.681319 0.888889
38 GH3 0.681319 0.973333
39 YGP 0.677083 0.901235
40 G3D 0.67033 0.986486
41 GDP AF3 0.659574 0.888889
42 GDP ALF 0.659574 0.888889
43 DGT 0.659341 0.923077
44 GMP 0.658228 0.88
45 G4P 0.655914 0.986486
46 JB3 0.653846 0.948718
47 NGD 0.647619 0.961039
48 CAG 0.642202 0.880952
49 2MD 0.62963 0.891566
50 G G 0.622449 0.935065
51 MGP 0.619565 0.961039
52 U2G 0.616822 0.936709
53 6G0 0.612903 0.961039
54 MGD 0.612613 0.891566
55 TPG 0.608696 0.840909
56 CG2 0.605505 0.936709
57 GDP 7MG 0.601942 0.911392
58 FEG 0.601852 0.879518
59 ZGP 0.59633 0.869048
60 MD1 0.591304 0.891566
61 PGD 0.591304 0.925
62 3GP 0.590909 0.946667
63 GPX 0.581633 0.946667
64 DGI 0.580645 0.923077
65 IDP 0.576087 0.972973
66 DBG 0.567797 0.948718
67 FE9 0.555556 0.776596
68 2GP 0.555556 0.96
69 G4M 0.547619 0.880952
70 BGO 0.544643 0.924051
71 I2C FE2 CMO CMO 0.538462 0.808989
72 ATP 0.537634 0.92
73 G1G 0.533898 0.925
74 AQP 0.531915 0.92
75 5FA 0.531915 0.92
76 G A A A 0.525862 0.923077
77 U A G G 0.521368 0.935065
78 01G 0.518868 0.902439
79 ITT 0.510638 0.868421
80 P2G 0.510638 0.883117
81 GGM 0.504274 0.901235
82 G1R G1R 0.504065 0.924051
83 DGP 0.5 0.910256
84 PGD O 0.5 0.850575
85 MGO 0.5 0.864198
86 P1G 0.5 0.871795
87 DG 0.5 0.910256
88 GTA 0.495495 0.936709
89 B4P 0.489362 0.894737
90 AP5 0.489362 0.894737
91 IMP 0.489362 0.959459
92 7DT 0.484536 0.906667
93 G G U 0.482143 0.935065
94 GPC 0.479339 0.879518
95 G C 0.478992 0.9
96 BA3 0.478723 0.894737
97 ADP 0.473684 0.92
98 G2Q 0.471698 0.961039
99 G7M 0.46875 0.948052
100 25L 0.458716 0.907895
101 A2D 0.457447 0.894737
102 RGT 0.45045 0.909091
103 AGS 0.45 0.873418
104 SAP 0.45 0.873418
105 SGP 0.44898 0.82716
106 U G A 0.448529 0.888889
107 A4P 0.445378 0.869048
108 G G G RPC 0.442623 0.875
109 ACQ 0.441176 0.896104
110 ANP 0.441176 0.896104
111 8GT 0.441176 0.875
112 APC G U 0.44 0.886076
113 G U34 0.438017 0.888889
114 6AD 0.436893 0.841463
115 G G G C 0.433071 0.9125
116 UP5 0.432203 0.873418
117 35G 0.431373 0.933333
118 C2E 0.431373 0.921053
119 PCG 0.431373 0.933333
120 A G C C 0.429688 0.911392
121 5GP 5GP 0.427184 0.883117
122 TAT 0.427184 0.884615
123 APR 0.425743 0.894737
124 AR6 0.425743 0.894737
125 AN2 0.424242 0.907895
126 7DD 0.424242 0.906667
127 DG DG 0.423423 0.865854
128 AD9 0.421569 0.896104
129 M33 0.42 0.883117
130 7D4 0.42 0.835443
131 UCG 0.419847 0.911392
132 H6Y 0.419048 0.946667
133 G C C C 0.416667 0.924051
134 ACP 0.415842 0.896104
135 T5A 0.414634 0.802326
136 MGQ 0.412844 0.935897
137 ADQ 0.412844 0.871795
138 A1R 0.412844 0.839506
139 MGT 0.411215 0.823529
140 A G U 0.410072 0.888889
141 93A 0.41 0.833333
142 A22 0.407407 0.907895
143 CA0 0.405941 0.896104
144 ATF 0.40566 0.884615
145 AGO 0.404762 0.888889
146 MGV 0.401786 0.890244
147 CGP 0.4 0.86747
Ligand no: 3; Ligand: MET; Similar ligands found: 32
No: Ligand ECFP6 Tc MDL keys Tc
1 MET 1 1
2 MED 1 1
3 DBB 0.518519 0.655172
4 ABA 0.518519 0.655172
5 2FM 0.514286 0.666667
6 NVA 0.5 0.758621
7 MF3 0.5 0.647059
8 DAB 0.466667 0.636364
9 HSE 0.466667 0.617647
10 SME 0.457143 0.717949
11 MHO 0.457143 0.717949
12 HCS 0.451613 0.733333
13 API 0.451613 0.606061
14 CDT 0.447368 0.756757
15 2MM 0.444444 0.657143
16 NLE 0.441176 0.766667
17 ONL 0.441176 0.71875
18 UN1 0.428571 0.606061
19 11C 0.428571 0.606061
20 MSE 0.428571 0.9
21 GGL 0.424242 0.625
22 GLU 0.424242 0.625
23 DGL 0.424242 0.625
24 CBH 0.418605 0.685714
25 ORN 0.411765 0.65625
26 AME 0.410256 0.771429
27 FME 0.410256 0.84375
28 LEU 0.40625 0.666667
29 CYS 0.4 0.666667
30 C2N 0.4 0.633333
31 DCY 0.4 0.666667
32 JM6 0.4 0.7
Similar Binding Sites (Proteins are less than 50% similar to leader)
Pocket No.: 1; Query (leader) PDB : 2FB3; Ligand: 5AD; Similar sites found: 56
This union binding pocket(no: 1) in the query (biounit: 2fb3.bio1) has 19 residues
No: Leader PDB Ligand P-value (APoc) PS_Score (APoc) Sequence Similarity
1 5CLO NS8 0.0204 0.40413 None
2 1OLT SAM 0.000192 0.45095 1.76471
3 5HVJ ANP 0.004664 0.43858 1.90476
4 4XH0 ADP 0.02113 0.40175 2.05882
5 4ME6 ADP 0.0166 0.40638 2.35294
6 3VOT ADP 0.01223 0.40167 2.35294
7 5AWM ANP 0.01242 0.40135 2.35294
8 1JPA ANP 0.00145 0.48428 2.5641
9 3VPC ADP 0.0005004 0.41528 3.19149
10 5J6Y BGC 0.01197 0.40649 3.19149
11 5J6Y GLC 0.01197 0.40649 3.19149
12 5LY1 PPI 0.001195 0.47245 3.23529
13 4PZ6 GMP 0.01992 0.40394 3.23529
14 4L3L 5FI 0.007112 0.42501 3.28947
15 1MFI FHC 0.02157 0.40358 3.50877
16 4R33 TRP 0.003145 0.44731 3.52941
17 4R33 SAH 0.003145 0.44731 3.52941
18 4YMJ 4EJ 0.01837 0.4049 3.61842
19 3HAV ATP 0.006711 0.42733 3.67893
20 1VKF CIT 0.01903 0.40477 3.7234
21 2GQS ADP 0.005173 0.40341 3.79747
22 2GQR ADP 0.006076 0.40051 3.79747
23 1M0W ANP 0.005124 0.41098 4.11765
24 4Y0X ADP 0.006386 0.40666 4.41176
25 1Q6O LG6 0.004606 0.40682 4.62963
26 2JKG PRO PRO PRO PRO PRO PRO PRO PRO 0.008134 0.43467 5.58659
27 2QX0 PH2 0.007077 0.43269 5.66038
28 4UTW RFW 0.008871 0.40235 5.67686
29 5C1P ADP 0.007217 0.40829 5.88235
30 1S5O 152 0.00666 0.42488 6.17647
31 4U0O MTA 0.001014 0.42224 6.75676
32 3EXS 5RP 0.009305 0.40318 6.78733
33 1U1J MET 0.02391 0.40175 7.05882
34 4DC2 ADE 0.009455 0.42271 7.14286
35 5DZT AMP 0.0003904 0.49059 7.64706
36 2IF8 ADP 0.01176 0.41133 7.64706
37 1UPR 4IP 0.007568 0.42065 9.7561
38 3T7V SAM 0.0004118 0.42842 10
39 1NJJ GET 0.008956 0.42378 10
40 4NJH 2K8 0.00000003875 0.49036 11.7391
41 4NJH SAM 0.00000003875 0.49036 11.7391
42 1IOW PHY 0.00816 0.42711 12.0915
43 5TH5 MET 0.00001983 0.54974 12.1673
44 3RFA SAM 0.00000008105 0.59791 13.5294
45 4WCX SAM 0.002152 0.40208 14.1176
46 3LQV ADE 0.003691 0.44557 15.3846
47 5WGG SAM 0.00000001454 0.64309 16.7647
48 4M7T SAM 0.00008091 0.47367 18.8889
49 5EXK 5AD 0.0004043 0.48746 21.7523
50 3C8F MT2 0.0001121 0.50832 24.898
51 5VSM MET 0.00000001228 0.60012 32.0755
52 5VSM 5AD 0.00000001228 0.60012 32.0755
53 1O9U ADZ 0.001191 0.48019 33.3333
54 4K37 SAM 0.00000007915 0.6116 36.1765
55 4K38 SAM 0.00000001597 0.60679 36.1765
56 4K39 SAM 0.00000008683 0.5923 36.1765
Pocket No.: 2; Query (leader) PDB : 2FB3; Ligand: GTP; Similar sites found: 144
This union binding pocket(no: 2) in the query (biounit: 2fb3.bio1) has 30 residues
No: Leader PDB Ligand P-value (APoc) PS_Score (APoc) Sequence Similarity
1 5CLO NS8 0.04433 0.40413 None
2 2YG2 S1P 0.0111 0.40231 None
3 3VPD ANP 0.007995 0.40552 1.42349
4 3O2K DST 0.004642 0.45255 1.76471
5 1OLT SAM 0.001083 0.45095 1.76471
6 5HVJ ANP 0.008608 0.444 1.90476
7 3H22 B53 0.02787 0.4033 2.0202
8 4XH0 ADP 0.04444 0.40296 2.05882
9 3DAK ANP 0.01901 0.40442 2.06897
10 2OVD DAO 0.0264 0.41386 2.1978
11 5T9C G3P 0.02422 0.41371 2.23881
12 2WSI FAD 0.007672 0.4063 2.28758
13 1TKK ALA GLU 0.007486 0.42015 2.35294
14 3VOT ADP 0.02227 0.40825 2.35294
15 4ME6 ADP 0.03705 0.40594 2.35294
16 5AWM ANP 0.02954 0.40201 2.35294
17 1JPA ANP 0.002845 0.48632 2.5641
18 4YVN EBS 0.02072 0.42003 2.64706
19 4CFT M48 0.01317 0.43 2.94118
20 4FFG 0U8 0.01839 0.40723 2.94118
21 4JR7 GNP 0.01417 0.40377 2.94118
22 1EHI ADP 0.01292 0.40243 2.94118
23 5JSP DQY 0.0339 0.40643 2.98507
24 5FYR INS 0.03394 0.40594 3.02013
25 4CNO 9PY 0.03567 0.40542 3.1746
26 3VPC ADP 0.003537 0.42087 3.19149
27 5J6Y GLC 0.02563 0.40649 3.19149
28 5J6Y BGC 0.02563 0.40649 3.19149
29 5LY2 OGA 0.02946 0.41166 3.23529
30 5LY1 PPI 0.02233 0.40756 3.23529
31 4PZ6 GMP 0.03742 0.40717 3.23529
32 2OG2 MLI 0.02828 0.40081 3.23529
33 1QIN GIP 0.001936 0.40233 3.27869
34 5DBX ANP 0.009624 0.42257 3.35366
35 5J75 6GQ 0.008425 0.42147 3.40909
36 2NLR BGC BGC G2F SHG 0.01881 0.40463 3.4188
37 3AJ6 NGA 0.04466 0.40275 3.4965
38 1MFI FHC 0.04672 0.40358 3.50877
39 2WA4 069 0.01445 0.41385 3.52941
40 2Y7G AAE 0.01323 0.40849 3.5461
41 4YMJ 4EJ 0.03176 0.41081 3.61842
42 1Y9Q MED 0.01917 0.42154 3.64583
43 3HAV ATP 0.01421 0.42998 3.67893
44 1VKF CIT 0.02474 0.41713 3.7234
45 2GQS ADP 0.01325 0.40846 3.79747
46 2GQR ADP 0.0145 0.40662 3.79747
47 3ZGJ RMN 0.01299 0.42884 3.82353
48 4FHD 0TT 0.0005981 0.42158 3.82353
49 4FHD EEM 0.0005981 0.42158 3.82353
50 3V8S 0HD 0.009306 0.4157 3.82353
51 4BG4 ADP 0.009987 0.41078 3.82353
52 1VBR XYS XYP 0.03749 0.40036 3.96341
53 3OFM 4B0 0.02744 0.40006 4.11765
54 4KBA 1QM 0.02639 0.40834 4.22961
55 4Y0X ADP 0.004635 0.43395 4.41176
56 2PZI AXX 0.01982 0.40707 4.41176
57 4L4J NAG NAG BMA MAN NAG 0.01111 0.40204 4.52489
58 4Z3E GAL NGA GLA BGC GAL 0.02192 0.41773 4.54545
59 2XG5 EC2 0.01097 0.43892 4.62428
60 2XG5 EC5 0.01097 0.43892 4.62428
61 1Q6O LG6 0.01235 0.4099 4.62963
62 1Q79 3AT 0.007293 0.42851 4.70588
63 4M1U A2G MBG 0.0005897 0.4901 4.7138
64 5FU3 BGC BGC BGC 0.02986 0.41078 4.71698
65 2WBV SIA 0.02247 0.43011 4.7619
66 5AIG VPR 0.01492 0.41707 5
67 4JH6 FCN 0.01475 0.42148 5.07246
68 3DGY 2GP 0.04352 0.40206 5.15464
69 2BWA GLC BGC 0.01853 0.4123 5.28634
70 2R5V HHH 0.005971 0.43278 5.29412
71 5NCF 8T5 0.04437 0.40031 5.30973
72 2QX0 PH2 0.01625 0.43237 5.66038
73 4IMO PWZ 0.01665 0.41997 5.68182
74 3SHR CMP 0.03099 0.40095 5.68562
75 1I82 BGC BGC 0.0006605 0.49977 5.82011
76 5C1P ADP 0.01469 0.4135 5.88235
77 4ZU4 4TG 0.01102 0.40556 6.08108
78 5M42 FMN 0.01484 0.40613 6.09319
79 1P0Z FLC 0.03454 0.4069 6.10687
80 4RDL FUC GAL NDG FUC 0.004078 0.45822 6.16883
81 1S5O 152 0.009199 0.43729 6.17647
82 4UEC MGT 0.02751 0.40806 6.41026
83 5TPV TYD 0.04525 0.40118 6.53595
84 4U0O MTA 0.003673 0.42708 6.75676
85 3EXS 5RP 0.01923 0.40772 6.78733
86 3M3E GAL A2G NPO 0.004467 0.4575 6.8323
87 2HY0 306 0.01574 0.41203 6.8323
88 1U1J MET 0.04916 0.40175 7.05882
89 4DC2 ADE 0.01757 0.42712 7.14286
90 2BOS GLA GAL 0.001112 0.46091 7.35294
91 2BOS GLA GAL GLC 0.00148 0.44176 7.35294
92 5FWJ MMK 0.009983 0.43026 7.35294
93 5F6U 5VK 0.007174 0.44456 7.64331
94 5DZT AMP 0.0006202 0.50334 7.64706
95 2QK4 ATP 0.01539 0.42052 7.64706
96 2IF8 ADP 0.02142 0.41728 7.64706
97 4LRJ ANP 0.01379 0.40764 7.69231
98 4FE2 ADP 0.02272 0.40413 7.84314
99 3M94 M7M 0.01289 0.42145 7.93651
100 3TII ANP 0.02123 0.40931 7.94118
101 5F2T PLM 0.009982 0.40435 8.11688
102 3KO0 TFP 0.03005 0.41251 8.91089
103 2P7Q GG6 0.007268 0.44224 9.02256
104 4KYS VIB 0.02892 0.41031 9.11765
105 2HZQ STR 0.0229 0.41624 9.1954
106 5K2M ADP 0.007855 0.40005 9.43396
107 1UPR 4IP 0.01295 0.42444 9.7561
108 3T7V SAM 0.002143 0.43029 10
109 1NJJ GET 0.01426 0.41806 10
110 5L8L ADP 0.03093 0.40099 10.2564
111 3VPB ADP 0.00449 0.40726 10.7143
112 2JGB MGT 0.02045 0.41835 10.7692
113 4WOE ADP 0.007906 0.43978 10.8824
114 5I8T LAC 0.03419 0.40641 11.1732
115 5A67 3PO 0.006446 0.445 11.3208
116 5BVB DOG 0.019 0.40106 11.3636
117 4NJH 2K8 0.000002473 0.50654 11.7391
118 4NJH SAM 0.000002473 0.50654 11.7391
119 5TH5 MET 0.00006312 0.55117 12.1673
120 5TH5 7C5 0.001655 0.42499 12.1673
121 1MEX RAC 0.02399 0.40661 12.2066
122 1Y7P RIP 0.03972 0.40378 13.0045
123 3RFA SAM 0.0000008427 0.59791 13.5294
124 4WCX SAM 0.008795 0.40372 14.1176
125 1EOM NAG MAN MAN MAN NAG GAL NAG GAL 0.005868 0.41791 14.1379
126 3H9R TAK 0.03359 0.40287 14.6789
127 4IAW LIZ 0.0148 0.41725 14.8936
128 3LQV ADE 0.008191 0.44557 15.3846
129 3I4X DST 0.01526 0.42071 15.5882
130 5WGG SAM 0.0000001141 0.64615 16.7647
131 4M7T SAM 0.0004283 0.47367 18.8889
132 1TFZ 869 0.002474 0.43111 20.2941
133 5EXK 5AD 0.0009665 0.49091 21.7523
134 5LXT ACP 0.005863 0.40829 24.4755
135 3C8F MT2 0.0003048 0.50832 24.898
136 1BHX ASP PHE GLU GLU ILE 0.01027 0.42527 26.6667
137 5KEW 6SB 0.04389 0.40146 31.25
138 5VSM 5AD 0.0000003163 0.60271 32.0755
139 5VSM MET 0.0000003402 0.60131 32.0755
140 1O9U ADZ 0.002162 0.48452 33.3333
141 5C79 PBU 0.04071 0.40894 35.3333
142 4K37 SAM 0.0000006223 0.6116 36.1765
143 4K38 SAM 0.000000371 0.60679 36.1765
144 4K39 SAM 0.000001117 0.5923 36.1765
Pocket No.: 3; Query (leader) PDB : 2FB3; Ligand: MET; Similar sites found: 52
This union binding pocket(no: 3) in the query (biounit: 2fb3.bio1) has 17 residues
No: Leader PDB Ligand P-value (APoc) PS_Score (APoc) Sequence Similarity
1 5CLO NS8 0.01859 0.40413 None
2 1OLT SAM 0.0005392 0.42518 1.76471
3 5HVJ ANP 0.004208 0.43858 1.90476
4 4XH0 ADP 0.01864 0.40241 2.05882
5 3VOT ADP 0.009366 0.40493 2.35294
6 1JPA ANP 0.001317 0.48428 2.5641
7 3VPC ADP 0.0003097 0.41656 3.19149
8 5J6Y BGC 0.01094 0.40649 3.19149
9 5J6Y GLC 0.01094 0.40649 3.19149
10 5LY1 PPI 0.001081 0.47245 3.23529
11 4PZ6 GMP 0.01815 0.40394 3.23529
12 4L3L 5FI 0.006494 0.43099 3.28947
13 1MFI FHC 0.01967 0.40358 3.50877
14 4R33 TRP 0.00278 0.45441 3.52941
15 4R33 SAH 0.00278 0.45441 3.52941
16 4W6Z 8ID 0.0323 0.40413 3.52941
17 4YMJ 4EJ 0.01838 0.40282 3.61842
18 3HAV ATP 0.007258 0.42345 3.67893
19 1VKF CIT 0.01546 0.4071 3.7234
20 1M0W ANP 0.00457 0.41746 4.11765
21 4Y0X ADP 0.004638 0.40666 4.41176
22 2XOC ADP 0.01368 0.42882 5.36398
23 2JKG PRO PRO PRO PRO PRO PRO PRO PRO 0.007462 0.43467 5.58659
24 2QX0 PH2 0.009062 0.426 5.66038
25 5C1P ADP 0.007275 0.40584 5.88235
26 1S5O 152 0.005427 0.42756 6.17647
27 1RE8 BD2 0.03734 0.40713 6.17647
28 4U0O MTA 0.0008298 0.42078 6.75676
29 1U1J MET 0.02194 0.40175 7.05882
30 4DC2 ADE 0.01049 0.4186 7.14286
31 5DZT AMP 0.002486 0.44784 7.64706
32 2IF8 ADP 0.01181 0.40902 7.64706
33 1UPR 4IP 0.03732 0.40078 9.7561
34 3T7V SAM 0.0003526 0.42348 10
35 1NJJ GET 0.008482 0.423 10
36 4NJH SAM 0.00000007589 0.47321 11.7391
37 4NJH 2K8 0.00000007589 0.47321 11.7391
38 1IOW PHY 0.009851 0.42698 12.0915
39 5TH5 MET 0.00001715 0.54974 12.1673
40 3RFA SAM 0.0000004462 0.55871 13.5294
41 4WCX SAM 0.00178 0.40088 14.1176
42 3LQV ADE 0.003359 0.44557 15.3846
43 5WGG SAM 0.00000003922 0.61251 16.7647
44 4M7T SAM 0.0000579 0.47367 18.8889
45 5EXK 5AD 0.005699 0.42659 21.7523
46 3C8F MT2 0.0004657 0.48527 24.898
47 5VSM 5AD 0.00000002641 0.57438 32.0755
48 5VSM MET 0.00000002641 0.57438 32.0755
49 1O9U ADZ 0.001076 0.48019 33.3333
50 4K37 SAM 0.00000007956 0.5971 36.1765
51 4K38 SAM 0.00000001676 0.59302 36.1765
52 4K39 SAM 0.00000008293 0.57988 36.1765
Pocket No.: 4; Query (leader) PDB : 2FB3; Ligand: MET; Similar sites found: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 4) in the query (biounit: 2fb3.bio1) has 16 residues
No: Leader PDB Ligand P-value (APoc) PS_Score (APoc) Sequence Similarity
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