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Receptor
PDB id Resolution Class Description Source Keywords
2D7C 1.75 Å EC: 3.-.-.- CRYSTAL STRUCTURE OF HUMAN RAB11 IN COMPLEX WITH FIP3 RAB- BINDING DOMAIN HOMO SAPIENS GTP-ASE COILED-COIL PROTEIN TRANSPORT
Ref.: STRUCTURAL BASIS FOR RAB11-DEPENDENT MEMBRANE RECRUITMENT OF A FAMILY OF RAB11-INTERACTING PROTEIN 3 (FIP3)/ARFOPHILIN-1. PROC.NATL.ACAD.SCI.USA V. 103 15416 2006
Ligand
Ligand Chain:Residue Validity Ligand Warnings Binding Data NGL Viewer Molecular Weight (Da) Formula SMILES
GTP A:1001;
B:1101;
Valid;
Valid;
none;
none;
submit data
523.18 C10 H16 N5 O14 P3 c1nc2...
MES A:1;
Invalid;
none;
submit data
195.237 C6 H13 N O4 S C1COC...
MG A:1002;
B:1102;
Part of Protein;
Part of Protein;
none;
none;
submit data
24.305 Mg [Mg+2...
View in 3D viewer
90% Homology Family
Leader
PDB id Resolution Class Description Source Keywords
2D7C 1.75 Å EC: 3.-.-.- CRYSTAL STRUCTURE OF HUMAN RAB11 IN COMPLEX WITH FIP3 RAB- BINDING DOMAIN HOMO SAPIENS GTP-ASE COILED-COIL PROTEIN TRANSPORT
Ref.: STRUCTURAL BASIS FOR RAB11-DEPENDENT MEMBRANE RECRUITMENT OF A FAMILY OF RAB11-INTERACTING PROTEIN 3 (FIP3)/ARFOPHILIN-1. PROC.NATL.ACAD.SCI.USA V. 103 15416 2006
Members (1)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 253 families.
1 2D7C - GTP C10 H16 N5 O14 P3 c1nc2c(n1[....
70% Homology Family (1)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 209 families.
1 2D7C - GTP C10 H16 N5 O14 P3 c1nc2c(n1[....
50% Homology Family (2)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 173 families.
1 2HV8 - GTP C10 H16 N5 O14 P3 c1nc2c(n1[....
2 2D7C - GTP C10 H16 N5 O14 P3 c1nc2c(n1[....
Polypharmacology
Similar Ligands
Ligand no: 1; Ligand: GTP; Similar ligands found: 156
No: Ligand ECFP6 Tc MDL keys Tc
1 GTP 1 1
2 GP3 0.921053 0.973684
3 GDP 0.909091 1
4 GSP 0.853659 0.948718
5 GNH 0.82716 0.986667
6 G1R 0.819277 0.986667
7 GAV 0.811765 0.961039
8 9GM 0.809524 0.973684
9 GNP 0.809524 0.973684
10 GCP 0.797619 0.973684
11 5GP 0.797468 0.986486
12 G 0.797468 0.986486
13 GMV 0.764706 0.973684
14 G2R 0.764045 0.961039
15 G5P 0.755319 0.973684
16 GTG 0.752688 0.936709
17 G2P 0.747126 0.961039
18 G3A 0.744681 0.973684
19 GDD 0.741935 0.961039
20 GDC 0.741935 0.961039
21 GKE 0.741935 0.961039
22 0O2 0.736264 0.986486
23 GP2 0.729412 0.961039
24 6CK 0.726316 0.936709
25 Y9Z 0.723404 0.902439
26 GPG 0.717391 0.961039
27 GFB 0.715789 0.961039
28 GDR 0.715789 0.961039
29 GPD 0.704082 0.925
30 GKD 0.693878 0.961039
31 JB2 0.693878 0.961039
32 GDX 0.686869 0.973684
33 ALF 5GP 0.685393 0.888889
34 GH3 0.681319 0.973333
35 YGP 0.677083 0.901235
36 G3D 0.67033 0.986486
37 GDP AF3 0.659574 0.888889
38 ALF GDP 0.659574 0.888889
39 GDP ALF 0.659574 0.888889
40 DGT 0.659341 0.923077
41 GMP 0.658228 0.88
42 G4P 0.655914 0.986486
43 JB3 0.653846 0.948718
44 NGD 0.647619 0.961039
45 CAG 0.642202 0.880952
46 2MD 0.62963 0.891566
47 MGP 0.619565 0.961039
48 U2G 0.616822 0.936709
49 6G0 0.612903 0.961039
50 MGD 0.612613 0.891566
51 TPG 0.608696 0.840909
52 CG2 0.605505 0.936709
53 GDP 7MG 0.601942 0.911392
54 FEG 0.601852 0.879518
55 G G 0.598039 0.948052
56 ZGP 0.59633 0.869048
57 PGD 0.591304 0.925
58 MD1 0.591304 0.891566
59 3GP 0.590909 0.946667
60 GPX 0.581633 0.946667
61 DGI 0.580645 0.923077
62 IDP 0.576087 0.972973
63 DBG 0.567797 0.948718
64 2GP 0.555556 0.96
65 FE9 0.555556 0.776596
66 G4M 0.547619 0.880952
67 BGO 0.544643 0.924051
68 GCP G 0.543689 0.921053
69 ATP 0.537634 0.92
70 HEJ 0.537634 0.92
71 G1G 0.533898 0.925
72 AQP 0.531915 0.92
73 5FA 0.531915 0.92
74 A G 0.525862 0.935065
75 G A A A 0.525862 0.923077
76 U A G G 0.521368 0.935065
77 HFD 0.520833 0.873418
78 R5I 0.520408 0.946667
79 R7I 0.520408 0.946667
80 01G 0.518868 0.902439
81 P2G 0.510638 0.883117
82 ITT 0.510638 0.868421
83 AKW 0.504348 0.890244
84 GGM 0.504274 0.901235
85 G1R G1R 0.504065 0.924051
86 DGP 0.5 0.910256
87 PGD O 0.5 0.850575
88 MGO 0.5 0.864198
89 DG 0.5 0.910256
90 P1G 0.5 0.871795
91 GTA 0.495495 0.936709
92 PRT 0.490741 0.959459
93 B4P 0.489362 0.894737
94 AP5 0.489362 0.894737
95 IMP 0.489362 0.959459
96 G U 0.487179 0.9
97 7DT 0.484536 0.906667
98 GPC 0.479339 0.879518
99 G C 0.478992 0.9
100 BA3 0.478723 0.894737
101 ADP 0.473684 0.92
102 G2Q 0.471698 0.961039
103 6YZ 0.470588 0.896104
104 G7M 0.46875 0.948052
105 C1Z 0.462963 0.986486
106 25L 0.458716 0.907895
107 A2D 0.457447 0.894737
108 RGT 0.45045 0.909091
109 AGS 0.45 0.873418
110 SAP 0.45 0.873418
111 SGP 0.44898 0.82716
112 A4P 0.445378 0.869048
113 G G G RPC 0.442623 0.875
114 ANP 0.441176 0.896104
115 ACQ 0.441176 0.896104
116 8GT 0.441176 0.875
117 APC G U 0.44 0.886076
118 AT4 0.438776 0.884615
119 G U34 0.438017 0.888889
120 6AD 0.436893 0.841463
121 G G G C 0.433071 0.9125
122 UP5 0.432203 0.873418
123 PCG 0.431373 0.933333
124 C2E 0.431373 0.921053
125 35G 0.431373 0.933333
126 A G C C 0.429688 0.911392
127 T99 0.427184 0.884615
128 5GP 5GP 0.427184 0.883117
129 TAT 0.427184 0.884615
130 AR6 0.425743 0.894737
131 APR 0.425743 0.894737
132 7DD 0.424242 0.906667
133 AN2 0.424242 0.907895
134 DG DG 0.423423 0.865854
135 AD9 0.421569 0.896104
136 M33 0.42 0.883117
137 7D4 0.42 0.835443
138 UCG 0.419847 0.911392
139 HDV 0.419048 0.825
140 H6Y 0.419048 0.946667
141 G C C C 0.416667 0.924051
142 ACP 0.415842 0.896104
143 T5A 0.414634 0.802326
144 A1R 0.412844 0.839506
145 ADQ 0.412844 0.871795
146 MGQ 0.412844 0.935897
147 A3R 0.412844 0.839506
148 MGT 0.411215 0.823529
149 A G U 0.410072 0.888889
150 93A 0.41 0.833333
151 A22 0.407407 0.907895
152 CA0 0.405941 0.896104
153 ATF 0.40566 0.884615
154 AGO 0.404762 0.888889
155 MGV 0.401786 0.890244
156 CGP 0.4 0.86747
Similar Binding Sites (Proteins are less than 50% similar to leader)
Pocket No.: 1; Query (leader) PDB : 2D7C; Ligand: GTP; Similar sites found with APoc: 565
This union binding pocket(no: 1) in the query (biounit: 2d7c.bio1) has 26 residues
No: Leader PDB Ligand Sequence Similarity
1 5UIV ADP None
2 5AOG IAC None
3 1Y63 ADP None
4 3IIJ ADP None
5 1ION ADP None
6 3VPD CIT None
7 5ZB0 ADP None
8 5ZB0 TYD None
9 1CBK ROI None
10 3H86 AP5 None
11 4ZU4 4TG None
12 5H4S RAM None
13 2GNK ATP None
14 2O66 FLC None
15 2DT9 THR None
16 3DC4 ADP 0.598802
17 1V8K ANP 1.79641
18 4NU0 AP5 1.79641
19 6GR0 F8W 1.79641
20 1NU4 MLA 2.06186
21 3U6B GDP 2.39521
22 4J0Q GDP 2.39521
23 3WY9 GDP 2.39521
24 5W76 GDP 2.39521
25 2BVN GNP 2.39521
26 2HCJ GDP 2.39521
27 1D8T GDP 2.39521
28 5JBQ GDP 2.39521
29 4G5G GDP 2.39521
30 3U6K GDP 2.39521
31 3WYA GDP 2.39521
32 5LB3 ADP 2.39521
33 4IHQ ADP 2.39521
34 3BER AMP 2.39521
35 4R43 GDP 2.39521
36 1TL2 NDG 2.39521
37 1APZ ASP 2.46914
38 1U0J ADP 2.99401
39 1NJF ADP 2.99401
40 5K5Z ANP 2.99401
41 1NJF AGS 2.99401
42 4Y4V DAL 2.99401
43 3H4S ADP 2.99401
44 4FRZ ADP 2.99401
45 1IZC PYR 2.99401
46 3FYH ADP 2.99401
47 6AR9 3L4 2.99401
48 4Z7X 3CX 2.99401
49 1XP8 AGS 3.00546
50 1SQL GUN 3.42466
51 1BG2 ADP 3.59281
52 2W58 ADP 3.59281
53 5ZBR ANP 3.59281
54 5FTB ANP 3.59281
55 2ZFI ADP 3.59281
56 2ZTS ADP 3.59281
57 2VVG ADP 3.59281
58 4Q1A 2XZ 3.59281
59 4Q1A UDP 3.59281
60 6A20 ADP 3.59281
61 5FHD ADP ALF 3.59281
62 1SQ5 ADP 3.59281
63 1JS8 MAN MAN BMA 3.59281
64 5H68 AGS 3.59281
65 5TIV A3P 3.59281
66 1Z83 AP5 3.59281
67 4L80 OXL 3.59281
68 2XT3 ADP 4.19162
69 4LPS GDP 4.19162
70 2C78 GNP 4.19162
71 2C77 GNP 4.19162
72 5W7Q GDP 4.19162
73 4WOP CTP 4.19162
74 4V03 ADP 4.19162
75 1F9V ADP 4.19162
76 4WEI GLC GAL 4.19162
77 2WW4 ADP 4.19162
78 1BO4 COA 4.19162
79 1OXV ANP 4.19162
80 2F5X ASP 4.19162
81 1NN5 ANP 4.19162
82 1NN5 2DT 4.19162
83 2ZWS PLM 4.19162
84 6FMC DUE 4.43038
85 1M48 FRG 4.51128
86 5H7K GDP 4.79042
87 5H7J GCP 4.79042
88 3FWY ADP 4.79042
89 4YJ1 ADP 4.79042
90 3QF7 ANP 4.79042
91 4C25 13P 4.79042
92 3FB4 AP5 4.79042
93 2WZF BGC 4.79042
94 5X40 ACP 4.79042
95 5WRI A3P 4.79042
96 4EBZ NAG NAG NAG NAG 4.79042
97 1LK7 DER 4.79042
98 4ZNL BEF ADP 4.79042
99 5WRJ A3P 4.79042
100 2OFE NAG 4.92958
101 4JLS 3ZE 5.26316
102 4PC3 GDP 5.38922
103 1JJ7 ADP 5.38922
104 5YT0 GDP 5.38922
105 4D81 ADP 5.38922
106 2GK6 ADP 5.38922
107 4U60 SIA GAL NGA 5.38922
108 4U60 SIA 5.38922
109 3IUY AMP 5.38922
110 1W5T ADP 5.38922
111 3BFV ADP 5.38922
112 1W5T ANP 5.38922
113 1S3G AP5 5.38922
114 6B8B ADP 5.38922
115 2J5V PCA 5.38922
116 4K7O EKZ 5.38922
117 1DNP MHF 5.38922
118 4U60 SIA GAL BGC NGA GAL 5.38922
119 3QVV A3P 5.38922
120 5I0H ADP BEF 5.98802
121 3B5J 12D 5.98802
122 5J1J ANP 5.98802
123 5Z69 AGS 5.98802
124 4RZ3 ADP 5.98802
125 5NM7 GLY 5.98802
126 2NCD ADP 5.98802
127 1CR1 TTP 5.98802
128 5EXT ADP 5.98802
129 3QXC ATP 5.98802
130 4B5W PYR 5.98802
131 1NY5 ADP 5.98802
132 4GBM A3P 5.98802
133 4O48 ASP 5.98802
134 6HKE MLT 5.98802
135 1T5C ADP 5.98802
136 5XQL C2E 5.98802
137 4CP8 MLI 5.98802
138 2PEL LBT 5.98802
139 6HKE LMR 5.98802
140 3AB4 THR 5.98802
141 5MVR ADP 6.17284
142 2XTZ GSP 6.58683
143 4RD0 GDP 6.58683
144 1JI0 ATP 6.58683
145 2OBM ADP 6.58683
146 4LYA ATP 6.58683
147 3BOS CDP 6.58683
148 3T34 GDP 6.58683
149 4R98 GNH 6.58683
150 3ZS9 ADP ALF 6.58683
151 2WOJ ADP ALF 6.58683
152 4R2I ANP 6.58683
153 5E5U MLI 6.58683
154 2OFW ADX 6.58683
155 2PEZ GGZ 6.58683
156 2PEZ DAT 6.58683
157 3FVQ ATP 6.58683
158 3UIE ANP 6.58683
159 1L2T ATP 6.58683
160 1KO8 6PG 6.58683
161 4QRH 0O2 6.58683
162 4QM7 GTP 6.58683
163 5M7P ADP 6.58683
164 5CKS 52L 6.58683
165 4MAF ADX 6.58683
166 5ZXD ATP 6.58683
167 2IL4 COA 6.79612
168 1YRB GDP 7.14286
169 2WHX ADP 7.14286
170 5GVR LMR 7.14286
171 1X6V ADP 7.14286
172 1T3D CYS 7.14286
173 6C0B PAM 7.14286
174 2JLR ANP 7.14286
175 1D2N ANP 7.14286
176 3EWA ANP 7.14286
177 4NCN GTP 7.18563
178 4TMZ GSP 7.18563
179 3CX8 GSP 7.18563
180 3AB3 GDP 7.18563
181 2ODE ALF GDP 7.18563
182 1BH2 GSP 7.18563
183 1LVG ADP 7.18563
184 1SVK ALF GDP 7.18563
185 1FQJ GDP 7.18563
186 2RCN GDP 7.18563
187 1ZCB GDP 7.18563
188 1FQJ ALF 7.18563
189 1Y3A GDP 7.18563
190 2HF9 GSP 7.18563
191 6CRK GDP 7.18563
192 2OM2 GDP 7.18563
193 1XMV ADP 7.18563
194 4XVU ATP 7.18563
195 4XTR ATP 7.18563
196 4XTR ADP 7.18563
197 1GOJ ADP 7.18563
198 1G3Q ADP 7.18563
199 3QKT ANP 7.18563
200 3BP1 GUN 7.18563
201 4FUA PGH 7.18563
202 1FNZ A2G 7.18563
203 1AQU A3P 7.18563
204 4YMU ATP 7.18563
205 4QOS ADP 7.18563
206 1P6O HPY 7.45342
207 4DCT GDP 7.78443
208 1G6H ADP 7.78443
209 5XKT GNP 7.78443
210 4E03 ADP 7.78443
211 4P4T GDP 7.78443
212 3DEF GDP 7.78443
213 1AKY AP5 7.78443
214 4UOX PLP 7.78443
215 1ZUI SKM 8.33333
216 4CVN ADP 8.37696
217 1RRC ADP 8.38323
218 4NON GDP 8.38323
219 4P3Y GDP 8.38323
220 4HI0 GDP 8.38323
221 1QF5 RPL 8.38323
222 1QF5 GDP 8.38323
223 2FNA ADP 8.38323
224 1E2K TMC 8.38323
225 1K4M CIT 8.38323
226 1G41 ADP 8.38323
227 5VGR GDP 8.38323
228 5G3Y ADP 8.38323
229 1OF8 G3P 8.38323
230 4YDS ATP 8.38323
231 2WJH GDP 8.43373
232 2WJH FLC 8.43373
233 2Y65 ADP 8.98204
234 2FSH ANP 8.98204
235 5IRN ADP 8.98204
236 5MEX PAP 8.98204
237 1HTW ADP 9.49367
238 3KJI ADP 9.52381
239 1XX6 ADP 9.52381
240 5XDR ADP 9.52381
241 4IDN GNP 9.52381
242 4A4Z ANP 9.52381
243 3IO3 ADP 9.52381
244 2O0J ADP 9.52381
245 4BFW ZVW 9.52381
246 3ZFD ANP 9.58084
247 2VB6 ADP BEF 9.58084
248 1FP6 ADP 9.58084
249 4IOK XPO 9.58084
250 5I34 GDP 9.58084
251 4IOK ADP 9.58084
252 5W75 GDP 10.1796
253 5W75 SUC 10.1796
254 4DDY DN6 10.1796
255 2BIF ANP 10.1796
256 2BIF SIN 10.1796
257 4GOX A3P 10.1796
258 3GFS FMN 10.1796
259 2DPY ADP 10.1796
260 4ZG4 VO4 ADP 10.7784
261 3Q9L ATP 10.7784
262 2ZJ5 ADP 10.7784
263 3R7F CP 10.7784
264 2I4I AMP 10.7784
265 4PX9 ADP 10.7784
266 2VWT PYR 10.7784
267 3A1S GDP 11.3772
268 5BN3 ADP 11.3772
269 5J1S ATP 11.3821
270 3TBK ANP 11.9048
271 4XGU ADP 11.9048
272 6AIC AMP 11.9048
273 4MKF AP5 11.9048
274 2RGX AP5 11.9048
275 2GKS ADP 11.9048
276 3NHB ADP 11.9048
277 6AU6 GDP 11.976
278 1VHT BA3 11.976
279 5H67 ATP 11.976
280 3ITJ CIT 11.976
281 2GWH A3P 11.976
282 2CDN ADP 12.5749
283 2ZPA ADP 12.5749
284 1NRJ GTP 12.844
285 5CK5 GDP 13.1737
286 1M2O GNP 13.1737
287 2QTV GNP 13.1737
288 2PL3 ADP 13.1737
289 2Z5F A3P 13.1737
290 1JJV ATP 13.7725
291 2WIC GNP 13.7725
292 4ZKD GDP 14.2857
293 5IRR GSP 14.2857
294 3B9Q MLI 14.2857
295 2OG2 MLI 14.2857
296 3TK1 GDP 14.2857
297 5LTJ BEF 14.2857
298 1H65 GDP 14.2857
299 1LVK MNT BEF 14.2857
300 5L3R GCP 14.2857
301 4IEE AGS 14.2857
302 1FNN ADP 14.2857
303 1K6M AGS 14.2857
304 1ZIN AP5 14.2857
305 4MKG AP5 14.2857
306 4HSE ADP 14.2857
307 5G41 AP5 14.2857
308 5LTJ ADP 14.2857
309 3KC1 2T6 14.2857
310 2XAU ADP 14.2857
311 4BAS GNP 14.3713
312 1M7G AV2 14.3713
313 5M04 GDP 14.3713
314 1M7G ADP 14.3713
315 1M7G ADX 14.3713
316 4PPF FLC 14.9701
317 2ZR9 DTP 14.9701
318 1DAK ADP 14.9701
319 1DAK DPU 14.9701
320 1GXU 2HP 15.3846
321 1XEX ATP 15.5689
322 1G7C 5GP 16.1677
323 3COB ADP 16.6667
324 1B0U ATP 16.6667
325 1TQ4 GDP 16.6667
326 3EZ2 ADP 16.6667
327 5BQ5 ADP BEF 16.6667
328 1F5N GNP 16.6667
329 1IHU AF3 16.6667
330 2D7D ADP 16.6667
331 1IHU ADP 16.6667
332 1OYY AGS 16.6667
333 2BEK ATP 16.6667
334 1YTM ATP 16.6667
335 3P4X ADP 16.6667
336 3DZD ADP 16.6667
337 6FAA ADP 16.7665
338 2KIN ADP 17
339 2WJG GDP 17.3653
340 2QZ4 ADP 17.3653
341 1SKQ GDP 17.9641
342 1OFH ADP 17.9641
343 2CBZ ATP 17.9641
344 1D2E GDP 18.5629
345 1F2U ATP 18.9189
346 3WXM GTP 19.0476
347 2QN6 GDP 19.0476
348 4B47 GDP 19.0476
349 1G7S GDP 19.0476
350 3DKP ADP 19.0476
351 1XKV ATP 19.0476
352 1IN4 ADP 19.0476
353 5AK0 8V1 19.0476
354 2FAH GDP 19.0476
355 4TL6 ANP 19.0476
356 3LRE ADP 19.0476
357 1OS1 PYR 19.0476
358 4X8O AP5 19.0476
359 5HR5 ADP 19.0476
360 2BO4 FLC 19.0476
361 4YS0 ADP 19.0476
362 1OS1 ATP 19.0476
363 5TSH ADP 19.1617
364 1PUJ GNP 19.1617
365 5TSH ANP 19.1617
366 5HCN GCP 19.7605
367 4OHY ANP 19.7605
368 4BQS ADP 19.7605
369 4BQS K2Q 19.7605
370 1W7J ADP BEF 19.8675
371 4JLV ADP 20.9581
372 1UJ2 ADP 20.9581
373 1UJ2 C5P 20.9581
374 2FH5 GTP 21.4286
375 3ZIA ADP 21.4286
376 3ZIA ATP 21.4286
377 2IS6 ADP 21.4286
378 1W0J ADP 21.4286
379 2CK3 ANP 21.4286
380 4H1V GNP 21.4286
381 5Y6N ADP 21.4286
382 2CE7 ADP 21.4286
383 1W0J ADP BEF 21.4286
384 2CK3 ADP 21.4286
385 1VKJ A3P 21.4286
386 1P9B GDP 21.4286
387 3BFX A3P 21.4286
388 2V7Q ATP 21.4286
389 5LV1 78T 21.4286
390 1T8U A3P 21.4286
391 2V7Q ADP 21.4286
392 5EE5 GTP 21.5569
393 1UPT GTP 21.5569
394 2PZE ATP 21.5569
395 4WZA ACP 21.5569
396 4WZA ADP 21.5569
397 1KK1 GNP 22.1557
398 1ZJ6 G3D 22.1557
399 3E70 GDP 22.1557
400 1F6B GDP 22.1557
401 1R0X ATP 22.1557
402 1P72 ADP 22.1557
403 2AWN ADP 22.1557
404 3AQ4 GDP 22.7545
405 3A4M ADP 22.7545
406 5IFS ADP 23.8095
407 6B4K ANP 23.8095
408 2VOH CIT 23.8095
409 3FKQ ATP 23.8095
410 5N69 ADP 23.8095
411 2X7I CIT 23.8095
412 1NST A3P 23.8095
413 4NE2 ADP 23.8095
414 4NE2 SH2 23.8095
415 1SVM ATP 23.8095
416 4WZ6 ATP 23.9521
417 1RJ9 GCP 24.0132
418 1MR3 G3D 24.5509
419 3RLF ANP 24.5509
420 2IYL GDP 25.3521
421 2X77 GDP 25.3968
422 3VMF GTP 26.1905
423 5GOE GDP 26.1905
424 4KVA GTP 26.1905
425 1Z6T ADP 26.1905
426 5MZN ADP 26.1905
427 5L3V GDP 26.1905
428 2CHG ANP 26.1905
429 4PJ3 ANP 26.1905
430 4OI4 ATP 26.1905
431 4U00 ADP 26.3473
432 3CNL GNP 26.9461
433 6CS8 F9Y 26.9461
434 5U32 GDP 28.5714
435 4FCW ADP 28.5714
436 4LJ9 ACP 28.5714
437 5WC2 ADP 28.5714
438 5VHC BEF ADP 28.5714
439 1D8C GLV 28.5714
440 1P7T PYR 28.5714
441 3KTA AP5 29.3413
442 5DI3 GNP 29.9401
443 4M9Q GNP 29.9401
444 6C90 ADP 30.7692
445 5L3S GNP 30.9524
446 2Q2Y ADP 30.9524
447 2Q2Y MKR 30.9524
448 5L3W GDP 30.9524
449 2C9O ADP 30.9524
450 5L3S G 30.9524
451 5KUT GDP 31.1377
452 3DOE GTP 31.7365
453 1KSH GDP 31.7365
454 2A5F GTP 31.7365
455 1ZD9 GDP 31.7365
456 3PCR GTP 32.0988
457 1RE0 GDP 32.3171
458 1S9D GDP 32.3171
459 4KAX GTP 32.3353
460 2J59 GTP 32.5301
461 1O3Y GTP 32.5301
462 1J2J GTP 32.5301
463 3N5C GDP 32.716
464 2W83 GTP 32.7273
465 1FZQ GDP 32.9341
466 4GOJ GNP 32.9341
467 4ZI2 GNP 32.9341
468 1YZG GDP 32.9341
469 1WDT GTP 33.3333
470 4PFO ADP 33.3333
471 4TTQ ATP 33.3333
472 4V0K GDP 33.5329
473 5KDO GDP 33.7838
474 3T12 GDP ALF 34.7305
475 3T1O GDP 34.7305
476 5FG3 GDP 35.7143
477 1IWE IMP 35.7143
478 4ZDJ UTP 35.7143
479 3RC3 ANP 35.7143
480 4PU6 ASP 35.7143
481 4YC7 GNP 36.5269
482 3W5J GDP 36.5269
483 4ITR GDP 36.5269
484 2WMO GTP 36.5269
485 4DID GDP 36.5269
486 5KSP GDP 37.1257
487 5KSZ GCP 37.1257
488 1CS4 GSP 38.0952
489 3PQC GDP 39.521
490 1R4A GNP 40
491 5UPK GNP 40.4762
492 1B7T ADP 40.4762
493 1KK8 BEF ADP 40.4762
494 3CV2 OXL 40.4762
495 2ZEJ GDP 41.9162
496 4YLG GDP 42.515
497 3B7G ANP 42.8571
498 3Q85 GNP 44.9102
499 1NHX FTB 45.2381
500 1NHX PEP 45.2381
501 2GMV UN8 45.2381
502 1MKY GDP 46.1078
503 3GJ7 GDP 47.3054
504 3GJ4 GDP 47.3054
505 3GJ5 GDP 47.3054
506 2W2X GSP 47.3054
507 6BSX GDP 47.3054
508 3T5G GDP 47.3054
509 1DS6 GDP 47.3054
510 3GJ8 GDP 47.3054
511 6BSX E7S 47.3054
512 1DAR GDP 47.619
513 3ZQ6 ADP ALF 47.619
514 2OZE AGS 47.619
515 1I4D GDP 47.9042
516 4HAT GNP 47.9042
517 5UWQ GNP 47.9042
518 5UWW GNP 47.9042
519 5UWP GNP 47.9042
520 5UWU GNP 47.9042
521 5UWO GNP 47.9042
522 6CIT GNP 47.9042
523 5UWI GNP 47.9042
524 5UWR GNP 47.9042
525 5DIF GNP 47.9042
526 5UWT GNP 47.9042
527 5UWH GNP 47.9042
528 5UWS GNP 47.9042
529 5DHF GNP 47.9042
530 5UWJ GNP 47.9042
531 5DI9 GNP 47.9042
532 5UQW GDP 47.9042
533 1HE1 GDP 47.9042
534 2FJU GSP 47.9042
535 3GJ3 GDP 47.9042
536 3CH5 GDP 47.9042
537 1HE1 AF3 47.9042
538 5WDR GNP 47.9532
539 1X1R GDP 48.3146
540 1WA5 GTP 48.503
541 3GJX GTP 48.503
542 1MH1 GNP 48.503
543 1E96 GTP 48.503
544 5JCP GDP ALF 48.503
545 3SBD GNP 48.503
546 2WKQ GTP 48.503
547 4XSH GSP 48.503
548 5HPY GDP 48.503
549 1G4U GDP 48.503
550 1G4U AF3 48.503
551 5TB5 GDP 48.6486
552 5TAR GDP 48.6486
553 3Q72 GNP 48.7952
554 4D0N GDP 49.1018
555 3WYG GTP 49.1018
556 3M1I GTP 49.1018
557 3WYF GTP 49.1018
558 6BCB GSP 49.1018
559 4XOI GTP 49.1018
560 6BCA GSP 49.1018
561 6BC0 GSP 49.1018
562 3LXR GDP 49.1018
563 1RYH GNP 49.1018
564 2GCO GNP 49.7006
565 2GCN GDP 49.7006
Pocket No.: 2; Query (leader) PDB : 2D7C; Ligand: GTP; Similar sites found with APoc: 27
This union binding pocket(no: 2) in the query (biounit: 2d7c.bio2) has 27 residues
No: Leader PDB Ligand Sequence Similarity
1 1ONI BEZ None
2 4CS9 AMP None
3 5CLO NS8 None
4 1V3S ATP 1.72414
5 1JG3 ADN 1.79641
6 6F5W KG1 2.39521
7 5DT6 GLU 2.99401
8 4ZJS 4P0 3.59281
9 6AYU F6P 4.19162
10 4PVR ASP 4.19162
11 3T64 DU3 4.19162
12 4Z2S NDG 4.22535
13 4Z2S NAG 4.22535
14 5GQI CTP 4.79042
15 2OFD NGA 4.92958
16 3FJG 3PG 5.38922
17 3KL3 GCU 5.98802
18 2V5K OXM 5.98802
19 1WRA PC 5.98802
20 1ITU CIL 5.98802
21 3W9F I3P 6.58683
22 4TQK NAG 7.78443
23 1Y2W NAG 11.2676
24 5UI2 SUC 11.976
25 5FJJ MAN 13.1737
26 3UG4 AHR 26.1905
27 4LHD GLY 26.1905
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