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Receptor
PDB id Resolution Class Description Source Keywords
2D32 2.4 Å EC: 6.3.2.2 CRYSTAL STRUCTURE OF MICHAELIS COMPLEX OF GAMMA- GLUTAMYLCYSTEINE SYNTHETASE ESCHERICHIA COLI GLUTATHIONE HOMEOSTASIS PEPTIDE SYNTHESIS PHOSPHORYL TRANSFER LIGASE
Ref.: STRUCTURAL BASIS OF EFFICIENT COUPLING PEPTIDE LIGATION AND ATP HYDROLYSIS BY GAMMA-GLUATAMYLCYSTEINE SYNTHETASE TO BE PUBLISHED
Ligand
Ligand Chain:Residue Validity Ligand Warnings Binding Data NGL Viewer Molecular Weight (Da) Formula SMILES
ANP A:1521;
B:2521;
C:3521;
D:4521;
Valid;
Valid;
Valid;
Valid;
none;
none;
none;
none;
submit data
506.196 C10 H17 N6 O12 P3 c1nc(...
CYS A:1520;
B:2520;
C:3520;
D:4520;
Valid;
Valid;
Valid;
Valid;
none;
none;
none;
none;
submit data
121.158 C3 H7 N O2 S C([C@...
GLU A:1519;
B:2519;
C:3519;
D:4519;
Valid;
Valid;
Valid;
Valid;
none;
none;
none;
none;
submit data
147.129 C5 H9 N O4 C(CC(...
MG A:1522;
A:1523;
A:1524;
A:1525;
B:2522;
B:2523;
B:2524;
C:3522;
C:3523;
C:3524;
D:4522;
D:4523;
D:4524;
Part of Protein;
Part of Protein;
Part of Protein;
Part of Protein;
Part of Protein;
Part of Protein;
Part of Protein;
Part of Protein;
Part of Protein;
Part of Protein;
Part of Protein;
Part of Protein;
Part of Protein;
none;
none;
none;
none;
none;
none;
none;
none;
none;
none;
none;
none;
none;
submit data
24.305 Mg [Mg+2...
View in 3D viewer
90% Homology Family
Leader
PDB id Resolution Class Description Source Keywords
1VA6 2.1 Å EC: 6.3.2.2 CRYSTAL STRUCTURE OF GAMMA-GLUTAMYLCYSTEINE SYNTHETASE FROM ESCHERICHIA COLI B COMPLEXED WITH TRANSITION-STATE ANALOGUE ESCHERICHIA COLI GLUTATHIONE HOMEOSTASIS BETA BARREL PEPTIDE SYNTHESIS TRANSITION STATE ANALOGUE LIGASE
Ref.: CRYSTAL STRUCTURE OF GAMMA-GLUTAMYLCYSTEINE SYNTHETASE: INSIGHTS INTO THE MECHANISM OF CATALYSIS BY A KEY ENZYME FOR GLUTATHIONE HOMEOSTASIS PROC.NATL.ACAD.SCI.USA V. 101 15052 2004
Members (2)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 3 families.
1 2D32 - CYS C3 H7 N O2 S C([C@@H](C....
2 1VA6 - P2S C9 H19 N2 O8 P S CC[C@H](C[....
70% Homology Family (2)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 3 families.
1 2D32 - CYS C3 H7 N O2 S C([C@@H](C....
2 1VA6 - P2S C9 H19 N2 O8 P S CC[C@H](C[....
50% Homology Family (2)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 3 families.
1 2D32 - CYS C3 H7 N O2 S C([C@@H](C....
2 1VA6 - P2S C9 H19 N2 O8 P S CC[C@H](C[....
Polypharmacology
Similar Ligands
Ligand no: 1; Ligand: ANP; Similar ligands found: 373
No: Ligand ECFP6 Tc MDL keys Tc
1 ANP 1 1
2 A2D 0.810811 0.945205
3 B4P 0.802632 0.945205
4 AP5 0.802632 0.945205
5 ADP 0.802632 0.972222
6 BA3 0.789474 0.945205
7 AU1 0.782051 1
8 HEJ 0.772152 0.972222
9 ATP 0.772152 0.972222
10 AT4 0.769231 0.933333
11 AN2 0.769231 0.986111
12 5FA 0.7625 0.972222
13 AQP 0.7625 0.972222
14 M33 0.759494 0.932432
15 MAP 0.752941 0.972973
16 ACP 0.75 0.945946
17 AR6 0.740741 0.945205
18 APR 0.740741 0.945205
19 ACQ 0.73494 0.945946
20 AD9 0.731707 0.945946
21 SAP 0.731707 0.921053
22 AGS 0.731707 0.921053
23 A 0.723684 0.944444
24 AMP 0.723684 0.944444
25 ATF 0.717647 0.933333
26 ADX 0.716049 0.851852
27 CA0 0.716049 0.92
28 6YZ 0.709302 0.945946
29 50T 0.707317 0.932432
30 PRX 0.698795 0.87013
31 ABM 0.696203 0.893333
32 AP2 0.679012 0.933333
33 A12 0.679012 0.933333
34 APC 0.678571 0.933333
35 T99 0.674419 0.933333
36 TAT 0.674419 0.933333
37 A22 0.674157 0.958904
38 SRA 0.670886 0.894737
39 SRP 0.670455 0.883117
40 5AL 0.666667 0.906667
41 A1R 0.659341 0.884615
42 ADQ 0.659341 0.92
43 A3R 0.659341 0.884615
44 3OD 0.648936 0.92
45 BIS 0.648936 0.909091
46 5SV 0.648352 0.82716
47 9X8 0.645161 0.896104
48 OAD 0.645161 0.92
49 25L 0.642105 0.958904
50 AMO 0.641304 0.907895
51 G5P 0.636364 0.897436
52 DLL 0.634409 0.906667
53 AHX 0.634409 0.897436
54 00A 0.634409 0.860759
55 ADV 0.632184 0.907895
56 RBY 0.632184 0.907895
57 ADP PO3 0.632184 0.917808
58 NB8 0.631579 0.897436
59 25A 0.630435 0.945205
60 OOB 0.630435 0.906667
61 8QN 0.630435 0.906667
62 G3A 0.626263 0.897436
63 4AD 0.623656 0.896104
64 PAJ 0.623656 0.8625
65 LAD 0.621053 0.839506
66 TXA 0.614583 0.907895
67 1ZZ 0.614583 0.819277
68 ME8 0.614583 0.819277
69 GTA 0.613861 0.864198
70 9ZD 0.612903 0.909091
71 9ZA 0.612903 0.909091
72 3UK 0.610526 0.894737
73 SON 0.604651 0.907895
74 ADP ALF 0.604396 0.848101
75 ALF ADP 0.604396 0.848101
76 PR8 0.604167 0.829268
77 B5V 0.604167 0.883117
78 WAQ 0.604167 0.860759
79 4UV 0.6 0.871795
80 GAP 0.6 0.87013
81 PTJ 0.597938 0.873418
82 FYA 0.597938 0.881579
83 VO4 ADP 0.597826 0.906667
84 ADP VO4 0.597826 0.906667
85 LMS 0.597561 0.829268
86 UP5 0.596154 0.896104
87 FA5 0.59596 0.883117
88 YAP 0.59596 0.871795
89 PAP 0.595506 0.958333
90 A4P 0.59434 0.823529
91 XAH 0.59 0.841463
92 4UU 0.588235 0.871795
93 AFH 0.588235 0.8625
94 9SN 0.585859 0.85
95 2A5 0.58427 0.894737
96 T5A 0.583333 0.821429
97 DQV 0.582524 0.932432
98 NAI 0.580952 0.884615
99 B5M 0.58 0.871795
100 B5Y 0.58 0.871795
101 ITT 0.579545 0.917808
102 ATR 0.577778 0.944444
103 OMR 0.575472 0.831325
104 5AS 0.574713 0.781609
105 YLP 0.571429 0.8
106 48N 0.571429 0.873418
107 AP0 0.570093 0.873418
108 4TC 0.570093 0.873418
109 7D3 0.569767 0.881579
110 ADJ 0.568807 0.831325
111 GNP 0.568421 0.922078
112 9GM 0.568421 0.922078
113 DAL AMP 0.568421 0.881579
114 6V0 0.566038 0.873418
115 TXD 0.566038 0.884615
116 DND 0.566038 0.907895
117 NAX 0.566038 0.851852
118 4UW 0.566038 0.839506
119 NXX 0.566038 0.907895
120 XYA 0.565789 0.821918
121 RAB 0.565789 0.821918
122 ADN 0.565789 0.821918
123 AOC 0.564706 0.8
124 7D4 0.561798 0.881579
125 ADP BMA 0.561224 0.894737
126 TXE 0.560748 0.884615
127 TYM 0.560748 0.883117
128 GA7 0.557692 0.883117
129 YLC 0.555556 0.819277
130 YLB 0.555556 0.8
131 139 0.554545 0.851852
132 5N5 0.551282 0.797297
133 JB6 0.55 0.860759
134 LAQ 0.54717 0.819277
135 F2R 0.544643 0.843373
136 MYR AMP 0.544554 0.797619
137 5CD 0.544304 0.783784
138 A4D 0.544304 0.797297
139 80F 0.54386 0.821429
140 7MD 0.542857 0.864198
141 6AD 0.542553 0.886076
142 A2R 0.541667 0.958904
143 UPA 0.541284 0.884615
144 YLA 0.540541 0.8
145 A A 0.54 0.918919
146 BTX 0.539823 0.821429
147 COD 0.539823 0.793103
148 HFD 0.537634 0.921053
149 G5A 0.537634 0.781609
150 3DH 0.535714 0.753247
151 AYB 0.535714 0.790698
152 CNA 0.535714 0.907895
153 BT5 0.535088 0.811765
154 ATP A A A 0.533981 0.905405
155 IOT 0.531532 0.811765
156 MTA 0.53012 0.753247
157 3AM 0.529412 0.90411
158 A3P 0.52809 0.944444
159 PPS 0.526316 0.851852
160 NAD 0.526316 0.906667
161 EP4 0.52439 0.734177
162 7D5 0.52381 0.855263
163 AMP DBH 0.52381 0.87013
164 J7C 0.522727 0.75
165 A5A 0.520833 0.809524
166 EAD 0.520661 0.851852
167 TSB 0.520408 0.821429
168 AHZ 0.518519 0.797619
169 DTA 0.518072 0.766234
170 M2T 0.518072 0.716049
171 A3D 0.517241 0.894737
172 6RE 0.517241 0.740741
173 YLY 0.516949 0.790698
174 SSA 0.515464 0.802326
175 NA7 0.514852 0.933333
176 ARG AMP 0.514019 0.809524
177 AR6 AR6 0.514019 0.893333
178 7MC 0.513514 0.843373
179 A2P 0.511111 0.930556
180 52H 0.510204 0.781609
181 VMS 0.510204 0.790698
182 54H 0.510204 0.790698
183 TYR AMP 0.509434 0.848101
184 TAD 0.509259 0.8625
185 NAQ 0.508333 0.85
186 A3N 0.505618 0.766234
187 AV2 0.505155 0.893333
188 53H 0.50505 0.781609
189 5CA 0.50505 0.802326
190 8X1 0.50505 0.755556
191 ARU 0.504951 0.839506
192 ZID 0.504132 0.894737
193 P1H 0.504 0.831325
194 NAE 0.5 0.871795
195 3AT 0.5 0.945205
196 AVV 0.5 0.873418
197 P5A 0.495146 0.747253
198 NSS 0.49505 0.802326
199 LSS 0.49505 0.764045
200 DSZ 0.49505 0.802326
201 N0B 0.491803 0.8
202 AF3 ADP 3PG 0.491071 0.817073
203 NVA LMS 0.490196 0.755556
204 DAT 0.489362 0.881579
205 IMO 0.488889 0.90411
206 ZAS 0.488636 0.792208
207 FDA 0.488372 0.813953
208 NAJ PZO 0.487395 0.85
209 4TA 0.487179 0.788235
210 LPA AMP 0.486486 0.797619
211 LEU LMS 0.485437 0.755556
212 DTP 0.484536 0.881579
213 V3L 0.484536 0.945205
214 S4M 0.483516 0.651685
215 GJV 0.483516 0.731707
216 DZD 0.483051 0.8625
217 2AM 0.482759 0.917808
218 5AD 0.481013 0.726027
219 GSU 0.480769 0.781609
220 KAA 0.480769 0.755556
221 NDE 0.480315 0.907895
222 M24 0.479339 0.851852
223 MAO 0.478261 0.761905
224 NEC 0.477778 0.727273
225 DSH 0.477778 0.707317
226 FAS 0.477273 0.831325
227 FAD 0.477273 0.831325
228 RGT 0.476636 0.933333
229 9K8 0.47619 0.698925
230 G A A A 0.474576 0.85
231 0WD 0.474576 0.897436
232 FNK 0.474074 0.786517
233 5X8 0.473684 0.74359
234 6FA 0.473282 0.821429
235 NDC 0.472868 0.85
236 FB0 0.472868 0.786517
237 YSA 0.472222 0.781609
238 7DD 0.468085 0.958333
239 OVE 0.466667 0.881579
240 MHZ 0.463158 0.701149
241 8PZ 0.462963 0.802326
242 A G 0.462185 0.860759
243 AMP NAD 0.462185 0.881579
244 A3G 0.461538 0.779221
245 NAJ PYZ 0.459677 0.809524
246 6C6 0.459184 0.858974
247 SFG 0.458333 0.730769
248 U A G G 0.458333 0.860759
249 7D7 0.45679 0.723684
250 128 0.45614 0.8
251 SFD 0.455224 0.736842
252 6IA 0.454545 0.817073
253 DDS 0.454545 0.855263
254 GDP 0.454545 0.896104
255 ODP 0.453782 0.886076
256 NJP 0.453782 0.921053
257 7DT 0.453608 0.958333
258 A7D 0.452632 0.75641
259 Z5A 0.452381 0.802326
260 WSA 0.452174 0.790698
261 U A 0.45082 0.884615
262 7C5 0.45045 0.797468
263 FAY 0.449275 0.841463
264 NDP 0.449153 0.897436
265 SA8 0.44898 0.690476
266 A5D 0.44898 0.766234
267 71V 0.446809 0.884615
268 GGZ 0.446602 0.804878
269 RFL 0.446043 0.802326
270 2SA 0.445545 0.907895
271 SAI 0.444444 0.716049
272 GP3 0.444444 0.897436
273 SAH 0.444444 0.725
274 PO4 PO4 A A A A PO4 0.443396 0.878378
275 A A A 0.443396 0.881579
276 4YB 0.442478 0.764045
277 SMM 0.441176 0.670455
278 S7M 0.441176 0.674419
279 GTP 0.441176 0.896104
280 Y3J 0.440476 0.706667
281 SAM 0.44 0.674419
282 649 0.439655 0.747253
283 12D 0.438596 0.809524
284 A3S 0.4375 0.789474
285 NPW 0.436975 0.864198
286 GCP 0.436893 0.873418
287 AAT 0.435644 0.690476
288 GNH 0.435644 0.909091
289 EEM 0.435644 0.674419
290 ETB 0.435484 0.813953
291 DCA 0.435484 0.804598
292 N6P 0.433962 0.890411
293 NZQ 0.433333 0.886076
294 TXP 0.433333 0.897436
295 PGS 0.43299 0.860759
296 APU 0.432203 0.871795
297 PUA 0.432 0.8625
298 62F 0.431655 0.841463
299 F2N 0.431507 0.795455
300 DA 0.430108 0.855263
301 D5M 0.430108 0.855263
302 J7V 0.429688 0.813953
303 NIA 0.428571 0.848101
304 COA 0.428571 0.804598
305 6K6 0.428571 0.905405
306 A3T 0.428571 0.8
307 0T1 0.428571 0.804598
308 P5F 0.427586 0.804598
309 AAM 0.425532 0.944444
310 0UM 0.424528 0.682353
311 8Q2 0.423729 0.775281
312 G1R 0.423077 0.884615
313 AMZ 0.422222 0.891892
314 C2R 0.422222 0.88
315 A U 0.420168 0.848101
316 IDP 0.42 0.894737
317 GSP 0.419048 0.851852
318 30N 0.418605 0.736842
319 CAO 0.418605 0.777778
320 DG1 0.418605 0.897436
321 1DG 0.418605 0.897436
322 COS 0.418605 0.786517
323 AMX 0.418605 0.813953
324 TM1 0.418182 0.797619
325 A6D 0.416667 0.746988
326 K15 0.416667 0.666667
327 V1N 0.415929 0.893333
328 CMX 0.415385 0.804598
329 SCO 0.415385 0.804598
330 GEK 0.415094 0.719512
331 XNP 0.414634 0.851852
332 NHD 0.414634 0.881579
333 9JJ 0.413793 0.841463
334 AIR 0.413793 0.876712
335 COK 0.413534 0.786517
336 G2R 0.412844 0.8625
337 ACO 0.412214 0.777778
338 FAM 0.412214 0.786517
339 FCX 0.412214 0.777778
340 NAP 0.410853 0.92
341 FA9 0.409396 0.843373
342 SXZ 0.409091 0.694118
343 HAX 0.409091 0.806818
344 TAP 0.407692 0.884615
345 2MC 0.407407 0.752688
346 62X 0.407407 0.651685
347 GKE 0.40708 0.8625
348 GDC 0.40708 0.8625
349 GDD 0.40708 0.8625
350 3KK 0.406015 0.786517
351 FYN 0.406015 0.804598
352 NVA 2AD 0.405941 0.740741
353 NA0 0.40458 0.907895
354 101 0.404255 0.855263
355 G 0.40404 0.883117
356 5GP 0.40404 0.883117
357 HDV 0.403846 0.87013
358 MGP 0.403846 0.8625
359 OXK 0.402985 0.786517
360 MCD 0.402985 0.786517
361 CA6 0.402985 0.714286
362 SOP 0.402985 0.786517
363 3AD 0.402299 0.783784
364 S8M 0.401869 0.78481
365 YE1 0.40146 0.795455
366 NMX 0.4 0.782609
367 7RP 0.4 0.902778
368 2VA 0.4 0.779221
369 1VU 0.4 0.777778
370 CO6 0.4 0.786517
371 CMC 0.4 0.786517
372 6G0 0.4 0.8625
373 GMV 0.4 0.873418
Ligand no: 2; Ligand: CYS; Similar ligands found: 34
No: Ligand ECFP6 Tc MDL keys Tc
1 CYS 1 1
2 DCY 1 1
3 DSN 0.65 0.84
4 SER 0.65 0.84
5 HCS 0.608696 0.916667
6 2RA 0.571429 0.807692
7 ABA 0.571429 0.75
8 DBB 0.571429 0.75
9 C2N 0.545455 0.791667
10 ASP 0.521739 0.703704
11 DAS 0.521739 0.703704
12 ASN 0.521739 0.612903
13 CSS 0.52 0.807692
14 DAB 0.5 0.777778
15 HSE 0.5 0.75
16 LEU 0.48 0.692308
17 AS2 0.48 0.692308
18 API 0.48 0.62069
19 NVA 0.48 0.666667
20 CSO 0.48 0.677419
21 HL5 0.448276 0.740741
22 GLU 0.444444 0.642857
23 DGL 0.444444 0.642857
24 GGL 0.444444 0.642857
25 ORN 0.428571 0.740741
26 ALA 0.428571 0.608696
27 DAL 0.428571 0.608696
28 NLE 0.413793 0.62069
29 3GC 0.405405 0.647059
30 UN1 0.4 0.62069
31 MED 0.4 0.666667
32 DLY 0.4 0.714286
33 MET 0.4 0.666667
34 11C 0.4 0.62069
Ligand no: 3; Ligand: GLU; Similar ligands found: 53
No: Ligand ECFP6 Tc MDL keys Tc
1 GGL 1 1
2 GLU 1 1
3 DGL 1 1
4 DGN 0.62963 0.821429
5 GLN 0.62963 0.821429
6 ONL 0.586207 0.821429
7 UN1 0.566667 0.96
8 11C 0.566667 0.96
9 HCS 0.555556 0.714286
10 NPI 0.53125 0.923077
11 HGA 0.53125 0.666667
12 HSE 0.518519 0.758621
13 DAB 0.518519 0.666667
14 MEQ 0.515152 0.71875
15 3O3 0.513514 0.727273
16 NVA 0.5 0.740741
17 API 0.5 0.884615
18 DAS 0.481481 0.846154
19 ASP 0.481481 0.846154
20 TNA 0.463415 0.685714
21 DBB 0.461538 0.692308
22 ABA 0.461538 0.692308
23 DSN 0.461538 0.655172
24 SER 0.461538 0.655172
25 RGP 0.459459 0.648649
26 ORN 0.451613 0.689655
27 HOZ 0.451613 0.666667
28 AE5 0.447368 0.727273
29 DCY 0.444444 0.642857
30 C2N 0.444444 0.666667
31 CYS 0.444444 0.642857
32 NLE 0.4375 0.689655
33 2HG 0.433333 0.653846
34 S2G 0.433333 0.653846
35 ASN 0.428571 0.677419
36 26P 0.428571 0.857143
37 3GC 0.425 0.705882
38 DLY 0.424242 0.666667
39 MED 0.424242 0.625
40 MET 0.424242 0.625
41 MSE 0.424242 0.606061
42 BIX 0.418605 0.631579
43 MF3 0.416667 0.625
44 CBH 0.414634 0.774194
45 DHH 0.411765 0.851852
46 LYS 0.411765 0.645161
47 SHR 0.409091 0.774194
48 2NP 0.405405 0.71875
49 AS2 0.4 0.84
50 5OY 0.4 0.648649
51 ONH 0.4 0.611111
52 2JJ 0.4 0.648649
53 LEU 0.4 0.642857
Similar Binding Sites (Proteins are less than 50% similar to leader)
Pocket No.: 1; Query (leader) PDB : 1VA6; Ligand: P2S; Similar sites found with APoc: 329
This union binding pocket(no: 1) in the query (biounit: 1va6.bio2) has 38 residues
No: Leader PDB Ligand Sequence Similarity
1 1EU1 GLC 0.965251
2 3PQB VGP 1.1976
3 4KBA 1QM 1.20846
4 4RF7 ARG 1.35135
5 5LHT TIH 1.36054
6 4WVW SLT 1.38889
7 5XIO HFG 1.40562
8 3C0G 3AM 1.4245
9 4ZH7 FUC GAL NAG GAL FUC 1.5444
10 4WOE ADP 1.5444
11 4L9I 8PR 1.5873
12 4XMF HSM 1.63043
13 3SHR CMP 1.67224
14 5FYR INS 1.67785
15 2R5V HHH 1.68067
16 2GQS C2R 1.68776
17 2HZQ STR 1.72414
18 3A23 GAL 1.73745
19 1Q79 3AT 1.75097
20 1ELI PYC 1.79949
21 1U6R ADP 1.84211
22 3C7F XYP XYP XYP 1.84805
23 3ZXR P3S 1.85185
24 3ZXR IQ1 1.85185
25 3JQ3 ADP 1.91257
26 5VLQ ANP 1.9305
27 4GNC ASO 2.00669
28 5GJO PLP 2.03046
29 1SQI 869 2.03562
30 2GVJ DGB 2.03666
31 5LY1 PPI 2.09974
32 2C91 TLA 2.12355
33 6E08 NAP 2.13592
34 1F52 ADP 2.13675
35 4D4U FUC 2.22222
36 4D52 GIV 2.22222
37 5LVP ATP 2.2508
38 5H9Y BGC BGC BGC BGC 2.25225
39 5H9Y BGC BGC BGC BGC BGC 2.25225
40 4QYN RTL 2.25564
41 2Q8E OGA 2.27273
42 5W75 SUC 2.29592
43 1YFS ALA 2.36559
44 5EXK MET 2.41692
45 4ZSD 7I6 2.43902
46 3R4S SIA 2.48307
47 4BG4 ADP 2.52809
48 5NGZ 2BG 2.53807
49 5LUN OGA 2.55682
50 1ZB6 GST 2.60586
51 3FW3 ETS 2.63158
52 6E1Q CFA 2.7027
53 5LRT ADP 2.75591
54 5KJW 53C 2.8103
55 5EJL C2E 2.82258
56 1RYD GLC 2.89575
57 5MRH Q9Z 2.89575
58 5TKL G3H 2.89575
59 2YIP YIO 2.89855
60 1ZM1 BGC BGC BGC 2.90456
61 4GLW NMN 2.95082
62 1J2Z SOG 2.96296
63 3JU6 ANP 2.97297
64 3WV6 GAL BGC 3.04054
65 3WV6 GAL GLC 3.04054
66 4YRI 4JH 3.07018
67 3MI3 LYS 3.07329
68 5VX9 FUC GAL NAG GAL BGC 3.10559
69 4HWT 1B2 3.1477
70 1VRP ADP 3.14961
71 3B6R ADP 3.14961
72 4OCT AKG 3.15315
73 2VL1 GLY GLY 3.16456
74 2WBV SIA 3.1746
75 4PTN GXV 3.207
76 6F05 GTS 3.25581
77 5BU3 4W9 3.26087
78 3GD9 GLC BGC BGC BGC 3.26975
79 5MJA 7O3 3.27869
80 2Z3U CRR 3.29412
81 2YAB AMP 3.3241
82 4HPP GLU 3.386
83 1F5F DHT 3.41463
84 5LI9 ACP 3.42857
85 4EUO ABU 3.4375
86 1NSZ GLC 3.45821
87 2G30 ALA ALA PHE 3.48837
88 2PS1 ORO 3.53982
89 6BHQ NAG NAG FUL BMA MAN MAN NAG GAL 3.57143
90 6D61 4AA 3.58974
91 2OO0 PLP 3.60934
92 4JH6 FCN 3.62319
93 4MJ0 BGC SIA SIA GAL 3.63636
94 4MJ0 SIA SIA GAL 3.63636
95 5HCA BGC 3.64964
96 4NRT 2NG 3.66795
97 4O9S 2RY 3.72093
98 2OI2 DP6 3.76712
99 2D6M LBT 3.77358
100 5J75 6GQ 3.78788
101 5VGS 9A7 3.82166
102 3NZ1 3NY 3.83142
103 4RKX 3S9 3.83142
104 4QDF 30Q 3.84615
105 5F90 LMR 3.84615
106 1KC7 PPR 3.861
107 5H9Q TD2 3.87097
108 5GLT BGC GAL NAG GAL 3.87324
109 1SWG BTN 3.90625
110 5LDQ NAP 3.9548
111 4IMO PWZ 3.97727
112 1MJT ITU 4.03458
113 3Q60 ATP 4.04313
114 2W92 NGT 4.05405
115 6F6D AKG 4.11765
116 5N2D 8J8 4.16667
117 4DW4 U5P 4.19162
118 2WQN ADP 4.19355
119 3M94 M7M 4.2328
120 6CAM BGC 4.23729
121 4IAW LIZ 4.25532
122 4B0T ADP 4.25963
123 2PCU ASP 4.2623
124 4EE7 PIS 4.27632
125 3A16 PXO 4.28954
126 1C1L GAL BGC 4.37956
127 1GT4 UNA 4.40252
128 2EW5 Y12 4.41989
129 3P7N FMN 4.44015
130 2BS5 BGC GAL FUC 4.44444
131 5INJ 6C7 4.44444
132 3ZXE PGZ 4.51128
133 1TOQ AMG 4.51128
134 3TTZ 07N 4.54545
135 1EXF GLY 4.54545
136 5DYO FLU 4.58716
137 2AJH MET 4.59184
138 5A6N U7E 4.59364
139 6FA4 D1W 4.62428
140 4B4Q A2G GAL NAG FUC GAL GLC 4.63576
141 4FF8 14S 4.64396
142 2CM4 RCL 4.66667
143 1ULE GLA GAL NAG 4.66667
144 4XJ6 GH3 4.6683
145 4FE2 AIR 4.70588
146 1RJW ETF 4.71976
147 4LO6 SIA GAL 4.73684
148 2BKL ZAH 4.82625
149 5V59 8X1 4.84211
150 3K4Z CBI 4.84429
151 2W47 UNF 4.86111
152 4OFG PCG 4.86111
153 1QKQ MAN 4.92958
154 2XMY CDK 5.03356
155 5HV7 RBL 5.04587
156 3CBC DBS 5.05051
157 3ACL 3F1 5.06757
158 1SDW IYT 5.09554
159 3V8S 0HD 5.12195
160 3RF4 FUN 5.17241
161 1IS3 LAT 5.18518
162 2OJW ADP 5.20833
163 5X7Q ACR 5.21236
164 3G1Z AMP 5.21472
165 4Z28 BTN 5.22388
166 1SLT NDG GAL 5.22388
167 4ZSI GLP 5.26316
168 1MFI FHC 5.26316
169 4ZSI 4R1 5.26316
170 6HDT BTN 5.26316
171 1W1G 4PT 5.29801
172 1UYY BGC BGC 5.34351
173 1EX7 5GP 5.37634
174 5YJS SAL 5.38462
175 3NNT DQA 5.43478
176 3KJQ B94 5.4878
177 2XG5 EC5 5.50459
178 2XG5 EC2 5.50459
179 5Y4R C2E 5.51724
180 4J0M BLD 5.59846
181 6FOF LAT 5.61225
182 5H2U 1N1 5.61798
183 3SAO DBH 5.625
184 3SAO NKN 5.625
185 2QX0 PH2 5.66038
186 4FFG LBS 5.69106
187 4FFG 0U8 5.69106
188 4MOB ADP 5.72289
189 6G47 SIA 5.74163
190 5NLD LBT 5.7554
191 3WUC GLC GAL 5.83942
192 4Y24 TD2 5.84416
193 5G48 1FL 5.88235
194 3EW2 BTN 5.92593
195 4YVN EBS 6.04288
196 5D9G GLU ASN LEU TYR PHE GLN 6.09756
197 5HWV MBN 6.15385
198 2AGC DAO 6.17284
199 3WG3 A2G GAL NAG FUC 6.17978
200 2CYB TYR 6.19195
201 4RT1 C2E 6.25
202 5NFB 8VT 6.25
203 4USF 6UI 6.25
204 4TQ3 GPP 6.27063
205 3TY3 GGG 6.28415
206 1J3R 6PG 6.31579
207 2RDE C2E 6.3745
208 2WXD E18 6.38723
209 3NV3 GAL NAG MAN 6.52174
210 1U0A BGC BGC BGC BGC 6.54206
211 3T2W BTN 6.55738
212 4H2X G5A 6.6474
213 1W6P NDG GAL 6.71642
214 3OYW TDG 6.71642
215 1GZW GAL BGC 6.71642
216 1Y7P RIP 6.72646
217 4QCK ASD 6.73575
218 3QPB URA 6.73759
219 3LGS SAH 6.74157
220 6EWZ APC 6.75105
221 2P7Q GG6 6.76692
222 3M3E GAL A2G NPO 6.8323
223 1WW5 SGA BGC 6.875
224 5OCG 9R5 6.87831
225 3ZJX BOG 6.92042
226 2YMZ LAT 6.92308
227 5H9P TD2 6.96203
228 5OCQ 9RN G4S 9RN G4S 7.01754
229 3KYG 5GP 5GP 7.04846
230 4D06 NAR 7.06714
231 3VY6 BGC BGC 7.0922
232 5VKM GAL SIA 7.09877
233 5YSN 5AD 7.11864
234 1AV5 AP2 7.14286
235 2QHS OCA 7.173
236 1TW4 CHD 7.2
237 2VSL MAA LYS PRO PHE 7.29167
238 2A1L PCW 7.40741
239 5Y72 DST 7.46269
240 4WUJ FMN 7.48299
241 5F7Y GLC GAL NAG GAL FUC A2G 7.5
242 5F7N NAG GAL FUC FUC A2G 7.5
243 5O5Y GLC 7.5431
244 5B09 4MX 7.69231
245 2Z6D FMN 7.69231
246 5NBP BGC BGC BGC 7.72059
247 5TPV TYD 7.84314
248 5KD6 6C7 7.8759
249 3ZW2 GAL FUC 8.04598
250 3ZW2 NAG GAL FUC 8.04598
251 2QHV OC9 8.09524
252 3T4L ZEA 8.14815
253 5N0L ILE 8.1761
254 4RYV ZEA 8.3871
255 2VQ5 HBA 8.45771
256 1KNM LAT 8.46154
257 1LSH PLD 8.46395
258 1F9V ADP 8.64553
259 2HRL SIA GAL SIA BGC NGA CEQ 8.66142
260 4JNJ BTN 8.69565
261 2W5P CL8 8.72483
262 3IWD M2T 8.82353
263 6GNO XDI 8.88889
264 1I82 BGC BGC 8.99471
265 3KYF 5GP 5GP 9.09091
266 6MJ7 ARG 9.09091
267 2YG2 FLC 9.30233
268 4DR9 BB2 9.375
269 6CDZ UMP 9.5057
270 5H4S RAM 9.50704
271 2WMC MGP 9.55056
272 5F6U 5VK 9.55414
273 4WN5 MVC 9.56522
274 4K55 H6P 9.67742
275 3ZGJ RMN 9.7035
276 5FUI APY 9.84848
277 5LN8 GAL 9.92366
278 4M1U A2G MBG 10
279 4INI AMP 10
280 4LRJ ANP 10.0592
281 1SU2 ATP 10.0629
282 2ZHL NAG GAL GAL NAG 10.1351
283 5M6N 7H9 10.1695
284 2JEN GLC GLC XYS XYS 10.3448
285 5DG2 GAL GLC 10.3704
286 1A78 TDG 10.4478
287 4NS0 PIO 10.5263
288 5XLY C2E 10.5263
289 5TVF CGQ 10.5263
290 5M90 JIF 10.7759
291 6GG9 FMN 11.1111
292 2GJ5 VD3 11.1111
293 2W24 LYS 11.3333
294 3B00 16A 11.3971
295 3G5K BB2 11.4754
296 5NCF 8T5 11.5044
297 1VKF CIT 11.7021
298 5ACM MBT 11.7117
299 3WUD GLC GAL 11.7647
300 3VV1 GAL FUC 11.875
301 3DZ6 M8E 11.9403
302 1ZNY GDP 12.0773
303 1DZK PRZ 12.1019
304 1QY1 PRZ 12.6437
305 4BPZ GLC BGC BGC 12.8906
306 5T7I LAT NAG GAL 12.9032
307 4GGZ BTN 13.0435
308 4YLZ LAT NAG GAL 13.0719
309 4F8L AES 14.4828
310 5A67 3PO 14.6226
311 3H0L ADP 14.8936
312 4UEC MGT 15.3846
313 4YEE 4CQ 15.5556
314 1OF4 BMA BMA BMA BMA BMA 15.6425
315 2CJU PHX 15.9292
316 1P0Z FLC 16.7939
317 6BU0 IHP 18.3206
318 1NKI PPF 18.5185
319 3N1S 5GP 19.3277
320 5YRJ BGC GLC 19.7183
321 5YRM BGC GLC 19.7183
322 5UPK ANP 20.8333
323 1I7M CG 20.8955
324 1I7M PUT 20.8955
325 2QL9 CIT 23.7113
326 3QRC SCR 24.2038
327 2BOS GLA GAL GLC 25
328 2BOS GLA GAL 25
329 2HO2 PRO PRO PRO PRO PRO PRO PRO PRO PRO LEU 26.3158
Pocket No.: 2; Query (leader) PDB : 1VA6; Ligand: ADP; Similar sites found with APoc: 326
This union binding pocket(no: 2) in the query (biounit: 1va6.bio2) has 36 residues
No: Leader PDB Ligand Sequence Similarity
1 1EU1 GLC 0.965251
2 3PQB VGP 1.1976
3 4KBA 1QM 1.20846
4 5JZJ AN2 1.3468
5 4RF7 ARG 1.35135
6 5LHT TIH 1.36054
7 4WVW SLT 1.38889
8 5XIO HFG 1.40562
9 3C0G 3AM 1.4245
10 4WOE ADP 1.5444
11 4ZH7 FUC GAL NAG GAL FUC 1.5444
12 4L9I 8PR 1.5873
13 4XMF HSM 1.63043
14 3SHR CMP 1.67224
15 5FYR INS 1.67785
16 2R5V HHH 1.68067
17 2GQS C2R 1.68776
18 2HZQ STR 1.72414
19 3A23 GAL 1.73745
20 1ELI PYC 1.79949
21 1U6R ADP 1.84211
22 3ZXR P3S 1.85185
23 3ZXR IQ1 1.85185
24 3JQ3 ADP 1.91257
25 5VLQ ANP 1.9305
26 4GNC ASO 2.00669
27 5GJO PLP 2.03046
28 1SQI 869 2.03562
29 3BP1 GUN 2.06897
30 5LY1 PPI 2.09974
31 5DBX ANP 2.13415
32 6E08 NAP 2.13592
33 1F52 ADP 2.13675
34 4RD0 GDP 2.16867
35 5LVP ATP 2.2508
36 5H9Y BGC BGC BGC BGC 2.25225
37 5H9Y BGC BGC BGC BGC BGC 2.25225
38 4QYN RTL 2.25564
39 5W75 SUC 2.29592
40 1YFS ALA 2.36559
41 5EXK MET 2.41692
42 4ZSD 7I6 2.43902
43 3R4S SIA 2.48307
44 4BG4 ADP 2.52809
45 5NGZ 2BG 2.53807
46 5LUN OGA 2.55682
47 5TZO 7V7 2.65957
48 6E1Q CFA 2.7027
49 5LRT ADP 2.75591
50 5KJW 53C 2.8103
51 5EJL C2E 2.82258
52 1RYD GLC 2.89575
53 5MRH Q9Z 2.89575
54 5TKL G3H 2.89575
55 2YIP YIO 2.89855
56 4GLW NMN 2.95082
57 1J2Z SOG 2.96296
58 3JU6 ANP 2.97297
59 3WV6 GAL BGC 3.04054
60 3WV6 GAL GLC 3.04054
61 4YRI 4JH 3.07018
62 5VX9 FUC GAL NAG GAL BGC 3.10559
63 4HWT 1B2 3.1477
64 1VRP ADP 3.14961
65 3B6R ADP 3.14961
66 2VL1 GLY GLY 3.16456
67 2WBV SIA 3.1746
68 2RIO ADP 3.22581
69 6F05 GTS 3.25581
70 5BU3 4W9 3.26087
71 3GD9 GLC BGC BGC BGC 3.26975
72 3PGU OLA 3.27869
73 5MJA 7O3 3.27869
74 2Z3U CRR 3.29412
75 2YAB AMP 3.3241
76 4HPP GLU 3.386
77 1F5F DHT 3.41463
78 1NSZ GLC 3.45821
79 2G30 ALA ALA PHE 3.48837
80 2PS1 ORO 3.53982
81 6BHQ NAG NAG FUL BMA MAN MAN NAG GAL 3.57143
82 2OO0 PLP 3.60934
83 4JH6 FCN 3.62319
84 4MJ0 BGC SIA SIA GAL 3.63636
85 4MJ0 SIA SIA GAL 3.63636
86 5HCA BGC 3.64964
87 4CJN QNZ 3.66795
88 4NRT 2NG 3.66795
89 4O9S 2RY 3.72093
90 2OI2 DP6 3.76712
91 2D6M LBT 3.77358
92 5J75 6GQ 3.78788
93 5VGS 9A7 3.82166
94 3NZ1 3NY 3.83142
95 4RKX 3S9 3.83142
96 4QDF 30Q 3.84615
97 5NEA 8V8 3.84615
98 5C3R HMU 3.861
99 5C3R AKG 3.861
100 1KC7 PPR 3.861
101 5H9Q TD2 3.87097
102 5GLT BGC GAL NAG GAL 3.87324
103 1SWG BTN 3.90625
104 5LDQ NAP 3.9548
105 4IMO PWZ 3.97727
106 3A76 SPD 3.97727
107 1MJT ITU 4.03458
108 3Q60 ATP 4.04313
109 2W92 NGT 4.05405
110 6F6D AKG 4.11765
111 5N2D 8J8 4.16667
112 4O12 2QG 4.19162
113 4DW4 U5P 4.19162
114 2WQN ADP 4.19355
115 3SJK LYS PRO VAL LEU ARG THR ALA 4.21053
116 1V9T SIN ALA PRO ALA NIT 4.21687
117 3M94 M7M 4.2328
118 4IAW LIZ 4.25532
119 4B0T ADP 4.25963
120 2PCU ASP 4.2623
121 3I8T LBT 4.26829
122 4EE7 PIS 4.27632
123 3A16 PXO 4.28954
124 1C1L GAL BGC 4.37956
125 1GT4 UNA 4.40252
126 2EW5 Y12 4.41989
127 3P7N FMN 4.44015
128 5INJ 6C7 4.44444
129 2BS5 BGC GAL FUC 4.44444
130 3ZXE PGZ 4.51128
131 1TOQ AMG 4.51128
132 3TTZ 07N 4.54545
133 1EXF GLY 4.54545
134 5DYO FLU 4.58716
135 2AJH MET 4.59184
136 5A6N U7E 4.59364
137 6FA4 D1W 4.62428
138 4B4Q A2G GAL NAG FUC GAL GLC 4.63576
139 4FF8 14S 4.64396
140 2CM4 RCL 4.66667
141 1ULE GLA GAL NAG 4.66667
142 4XJ6 GH3 4.6683
143 4FE2 AIR 4.70588
144 1RJW ETF 4.71976
145 4LO6 SIA GAL 4.73684
146 2BKL ZAH 4.82625
147 5V59 8X1 4.84211
148 2W47 UNF 4.86111
149 4OFG PCG 4.86111
150 1QKQ MAN 4.92958
151 2XMY CDK 5.03356
152 5HV7 RBL 5.04587
153 3CBC DBS 5.05051
154 3ACL 3F1 5.06757
155 1SDW IYT 5.09554
156 3V8S 0HD 5.12195
157 1OFZ FUC 5.12821
158 3RF4 FUN 5.17241
159 1IS3 LAT 5.18518
160 2OJW ADP 5.20833
161 3G1Z AMP 5.21472
162 4Z28 BTN 5.22388
163 1SLT NDG GAL 5.22388
164 4ZSI GLP 5.26316
165 1MFI FHC 5.26316
166 6HDT BTN 5.26316
167 4ZSI 4R1 5.26316
168 1UYY BGC BGC 5.34351
169 1EX7 5GP 5.37634
170 5YJS SAL 5.38462
171 4L4J NAG NAG BMA MAN NAG 5.42986
172 3NNT DQA 5.43478
173 3KJQ B94 5.4878
174 2XG5 EC2 5.50459
175 2XG5 EC5 5.50459
176 5OQW A4E 5.51181
177 5Y4R C2E 5.51724
178 4J0M BLD 5.59846
179 6FOF LAT 5.61225
180 5H2U 1N1 5.61798
181 3SAO DBH 5.625
182 3SAO NKN 5.625
183 2QX0 PH2 5.66038
184 4FFG 0U8 5.69106
185 4FFG LBS 5.69106
186 4MOB ADP 5.72289
187 6G47 SIA 5.74163
188 5NLD LBT 5.7554
189 4Y24 TD2 5.84416
190 5G48 1FL 5.88235
191 3EW2 BTN 5.92593
192 4YVN EBS 6.04288
193 5D9G GLU ASN LEU TYR PHE GLN 6.09756
194 5HWV MBN 6.15385
195 3WG3 A2G GAL NAG FUC 6.17978
196 2CYB TYR 6.19195
197 4RT1 C2E 6.25
198 5NFB 8VT 6.25
199 4USF 6UI 6.25
200 4TQ3 GPP 6.27063
201 3TY3 GGG 6.28415
202 1J3R 6PG 6.31579
203 2RDE C2E 6.3745
204 4XQM MAN 6.38298
205 2WXD E18 6.38723
206 6DZN AE3 6.57277
207 4P25 FUC GAL NAG FUC 6.62252
208 4H2X G5A 6.6474
209 1W6P NDG GAL 6.71642
210 1W6O LAT 6.71642
211 3OYW TDG 6.71642
212 1GZW GAL BGC 6.71642
213 1Y7P RIP 6.72646
214 4QCK ASD 6.73575
215 3QPB URA 6.73759
216 6EWZ APC 6.75105
217 2P7Q GG6 6.76692
218 3M3E GAL A2G NPO 6.8323
219 1WW5 SGA BGC 6.875
220 5OCG 9R5 6.87831
221 3ZJX BOG 6.92042
222 2YMZ LAT 6.92308
223 5H9P TD2 6.96203
224 5OCQ 9RN G4S 9RN G4S 7.01754
225 3KYG 5GP 5GP 7.04846
226 4CPH LH4 7.08661
227 3VY6 BGC BGC 7.0922
228 5VKM GAL SIA 7.09877
229 5YSN 5AD 7.11864
230 2QHS OCA 7.173
231 2VSL MAA LYS PRO PHE 7.29167
232 5Y72 DST 7.46269
233 4WUJ FMN 7.48299
234 5F7Y GLC GAL NAG GAL FUC A2G 7.5
235 5F7N NAG GAL FUC FUC A2G 7.5
236 5O5Y GLC 7.5431
237 2Z6D FMN 7.69231
238 5B09 4MX 7.69231
239 5TPV TYD 7.84314
240 5KD6 6C7 7.8759
241 2CJ9 SSA 7.91506
242 5ODY 9SK 7.97101
243 3ZW2 NAG GAL FUC 8.04598
244 3ZW2 GAL FUC 8.04598
245 2QHV OC9 8.09524
246 3T4L ZEA 8.14815
247 5KWY C3S 8.27068
248 4RYV ZEA 8.3871
249 2VQ5 HBA 8.45771
250 1KNM LAT 8.46154
251 3CM2 X23 8.46154
252 1LSH PLD 8.46395
253 3RGA LSB 8.48057
254 1F9V ADP 8.64553
255 2HRL SIA GAL SIA BGC NGA CEQ 8.66142
256 4JNJ BTN 8.69565
257 2W5P CL8 8.72483
258 3IWD M2T 8.82353
259 6GNO XDI 8.88889
260 1I82 BGC BGC 8.99471
261 3KYF 5GP 5GP 9.09091
262 6MJ7 ARG 9.09091
263 4DR9 BB2 9.375
264 6CDZ UMP 9.5057
265 5H4S RAM 9.50704
266 2WMC MGP 9.55056
267 5F6U 5VK 9.55414
268 4WN5 MVC 9.56522
269 4K55 H6P 9.67742
270 3ZGJ RMN 9.7035
271 5FUI APY 9.84848
272 5YRG BGC GLC 9.85915
273 5LN8 GAL 9.92366
274 4M1U A2G MBG 10
275 4INI AMP 10
276 4LRJ ANP 10.0592
277 1SU2 ATP 10.0629
278 2ZHL NAG GAL GAL NAG 10.1351
279 5M6N 7H9 10.1695
280 5FIT AP2 10.2041
281 2JEN GLC GLC XYS XYS 10.3448
282 5DG2 GAL GLC 10.3704
283 4MTI 2DX 10.4348
284 1A78 TDG 10.4478
285 5XLY C2E 10.5263
286 5TVF CGQ 10.5263
287 5M90 JIF 10.7759
288 1Y2F WAI 10.7914
289 4H69 10Y 10.8247
290 2J5B TYE 10.9195
291 6GG9 FMN 11.1111
292 2GJ5 VD3 11.1111
293 2Z49 AMG 11.3426
294 3B00 16A 11.3971
295 3G5K BB2 11.4754
296 5NCF 8T5 11.5044
297 1VKF CIT 11.7021
298 5ACM MBT 11.7117
299 3WUD GLC GAL 11.7647
300 3VV1 GAL FUC 11.875
301 3DZ6 M8E 11.9403
302 1ZNY GDP 12.0773
303 1QY1 PRZ 12.6437
304 4BPZ GLC BGC BGC 12.8906
305 5T7I LAT NAG GAL 12.9032
306 1OGX EQU 12.9771
307 4GGZ BTN 13.0435
308 4YLZ LAT NAG GAL 13.0719
309 4F8L AES 14.4828
310 3H0L ADP 14.8936
311 2CJU PHX 15.9292
312 1P0Z FLC 16.7939
313 6BU0 IHP 18.3206
314 1NKI PPF 18.5185
315 3C8F MT2 19.1837
316 3N1S 5GP 19.3277
317 5YRJ BGC GLC 19.7183
318 5YRM BGC GLC 19.7183
319 5UPK ANP 20.8333
320 1I7M CG 20.8955
321 1I7M PUT 20.8955
322 2QL9 CIT 23.7113
323 3QRC SCR 24.2038
324 2BOS GLA GAL GLC 25
325 2BOS GLA GAL 25
326 2HO2 PRO PRO PRO PRO PRO PRO PRO PRO PRO LEU 26.3158
Pocket No.: 3; Query (leader) PDB : 1VA6; Ligand: P2S; Similar sites found with APoc: 60
This union binding pocket(no: 3) in the query (biounit: 1va6.bio1) has 38 residues
No: Leader PDB Ligand Sequence Similarity
1 1RZX ACE VAL LYS GLU SER LEU VAL None
2 5JZJ AN2 1.3468
3 5O9W AKG 1.63488
4 4GN8 ASO 2.00669
5 3BP1 GUN 2.06897
6 1Q8Y ADE 2.14477
7 4RD0 GDP 2.16867
8 4D52 GXL 2.22222
9 5KWW 6YA 2.3166
10 4U9U FAD 2.84698
11 5BU2 AMP 2.86344
12 4NFN 2KC 2.91262
13 1KQW RTL 2.98507
14 3I4X DST 3.01075
15 4A91 GLU 3.02013
16 3B6R CRN 3.14961
17 2RIO ADP 3.22581
18 3PGU OLA 3.27869
19 1I7E IBS 3.39623
20 4WMY 3S6 3.59477
21 4MJ0 SIA SIA 3.63636
22 4E8C GAL 3.66795
23 3IT7 TLA 3.84615
24 5C3R HMU 3.861
25 5C3R AKG 3.861
26 3A76 SPD 3.97727
27 5V3D FCN 4.13793
28 4QPW XYP XYP XYP 4.22535
29 2ZSC BTN 4.25532
30 5K21 6QF 4.25532
31 3GNI ATP 4.62725
32 5Z46 8XL 4.85437
33 5Z46 GST 4.85437
34 6GVZ CHO 4.91803
35 1OFZ FUC 5.12821
36 2ZX2 RAM 5.12821
37 4CSD MFU 5.14706
38 5X7Q GLC GLC GLC GLC GLC 5.21236
39 2J0B UDP 5.35714
40 5VNF VAL THR SER VAL VAL 6.36943
41 2YKL NLD 6.60377
42 4P25 FUC GAL NAG FUC 6.62252
43 2C49 ADN 6.62252
44 1W6O LAT 6.71642
45 1FHX 4IP 6.97674
46 4CPH LH4 7.08661
47 4UWM FMN 8.20106
48 4LUT DCS 8.31169
49 3CM2 X23 8.46154
50 3RGA LSB 8.48057
51 1URX AAL GAL AAL GAL AAL GAL AAL 8.86525
52 2BVE PH5 9.2437
53 6DW2 HD4 10.1266
54 1PVC ILE SER GLU VAL 10.2941
55 1N5S ADL 10.7143
56 1Y2F WAI 10.7914
57 2Z48 NGA 11.3426
58 4EKV BTN 11.9497
59 4B1M FRU FRU 14.0541
60 5T48 MGP 18.75
Pocket No.: 4; Query (leader) PDB : 1VA6; Ligand: ADP; Similar sites found with APoc: 69
This union binding pocket(no: 4) in the query (biounit: 1va6.bio1) has 35 residues
No: Leader PDB Ligand Sequence Similarity
1 1RZX ACE VAL LYS GLU SER LEU VAL None
2 2VFT SOR 1.4218
3 1Q79 3AT 1.75097
4 2OS2 OGA 2.09974
5 3OGV PTQ 2.12355
6 2OEM 1AE 2.17918
7 4D52 GIV 2.22222
8 4D52 GXL 2.22222
9 5KWW 6YA 2.3166
10 4YZ5 SLT 2.3166
11 3HAV ATP 2.34114
12 5JSP DQY 2.48756
13 4NFN 2KC 2.91262
14 4LIT AKG 2.9484
15 1KQW RTL 2.98507
16 4A91 GLU 3.02013
17 3MI3 LYS 3.07329
18 4ZTD ALA GLY ALA GLY ALA 3.55731
19 4H6B 10Y 3.58974
20 4WMY 3S6 3.59477
21 4E8C GAL 3.66795
22 5LJB RTL 3.7037
23 3IT7 TLA 3.84615
24 3O2K DST 4.00844
25 1XC6 GAL 4.05405
26 5V3D FCN 4.13793
27 4QPW XYP XYP XYP 4.22535
28 6GW4 CHO 4.23453
29 4CQK PIO 4.25532
30 1Z03 OCH 4.4843
31 3GNI ATP 4.62725
32 5Z46 8XL 4.85437
33 2ZX2 RAM 5.12821
34 1OFZ FUL 5.12821
35 2AXR ABL 5.16899
36 5X7Q GLC GLC GLC GLC 5.21236
37 2J0B UDP 5.35714
38 6A63 LAT 5.7971
39 3WUC GLC GAL 5.83942
40 5FQ0 FLC 6.14035
41 2AGC DAO 6.17284
42 1GXS DKA 6.2963
43 3NV3 GAL NAG MAN 6.52174
44 1U0A BGC BGC BGC BGC 6.54206
45 3T2W BTN 6.55738
46 2C49 ADN 6.62252
47 3UEC ALA ARG TPO LYS 6.84932
48 5BVE 4VG 6.94981
49 1FHX 4IP 6.97674
50 4D06 NAR 7.06714
51 1TW4 CHD 7.2
52 2A1L PCW 7.40741
53 1Y42 TYR 7.90816
54 4UWM FMN 8.20106
55 4LUT DCS 8.31169
56 2BVE PH5 9.2437
57 5NVX 4YY 9.87654
58 6DW2 HD4 10.1266
59 1PVC ILE SER GLU VAL 10.2941
60 5IDB BMA 10.5634
61 1N5S ADL 10.7143
62 2Z48 NGA 11.3426
63 4EKV BTN 11.9497
64 1DZK PRZ 12.1019
65 5FU3 BGC BGC BGC 12.2642
66 4B1M FRU FRU 14.0541
67 4UEC MGT 15.3846
68 4YEE 4CQ 15.5556
69 5T48 MGP 18.75
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