-->
Receptor
PDB id Resolution Class Description Source Keywords
2BHW 2.5 Å NON-ENZYME: BINDING PEA LIGHT-HARVESTING COMPLEX II AT 2.5 ANGSTROM RESOLUTION PISUM SATIVUM LHC-II PHOTOSYNTHESIS LIGHT-HARVESTING MEMBRANE PROTEIN CHLOROPHYLL CHLOROPLAST CHROMOPHORE MEMBRANE PHOSPHORYLATION PHOTOSYSTEM I PHOTOSYSTEM II PLASTID THYLAKOID TRANSIT PEPTIDE TRANSMEMBRANE
Ref.: MECHANISMS OF PHOTOPROTECTION AND NONPHOTOCHEMICAL QUENCHING IN PEA LIGHT-HARVESTING COMPLEX AT 2.5 A RESOLUTION. EMBO J. V. 24 919 2005
Ligand
Ligand Chain:Residue Validity Ligand Warnings Binding Data NGL Viewer Molecular Weight (Da) Formula SMILES
CHL A:609;
A:610;
A:611;
A:612;
A:613;
A:614;
B:609;
B:610;
B:611;
B:612;
B:613;
B:614;
C:609;
C:610;
C:611;
C:612;
C:613;
C:614;
Part of Protein;
Part of Protein;
Part of Protein;
Part of Protein;
Part of Protein;
Part of Protein;
Part of Protein;
Part of Protein;
Part of Protein;
Part of Protein;
Part of Protein;
Part of Protein;
Part of Protein;
Part of Protein;
Part of Protein;
Part of Protein;
Part of Protein;
Part of Protein;
none;
none;
none;
none;
none;
none;
none;
none;
none;
none;
none;
none;
none;
none;
none;
none;
none;
none;
submit data
907.472 C55 H70 Mg N4 O6 CCC1=...
CLA A:601;
A:602;
A:603;
A:604;
A:605;
A:606;
A:607;
A:608;
B:601;
B:602;
B:603;
B:604;
B:605;
B:606;
B:607;
B:608;
C:601;
C:602;
C:603;
C:604;
C:605;
C:606;
C:607;
C:608;
Part of Protein;
Part of Protein;
Part of Protein;
Part of Protein;
Part of Protein;
Part of Protein;
Part of Protein;
Part of Protein;
Part of Protein;
Part of Protein;
Part of Protein;
Part of Protein;
Part of Protein;
Part of Protein;
Part of Protein;
Part of Protein;
Part of Protein;
Part of Protein;
Part of Protein;
Part of Protein;
Part of Protein;
Part of Protein;
Part of Protein;
Part of Protein;
none;
none;
none;
none;
none;
none;
none;
none;
none;
none;
none;
none;
none;
none;
none;
none;
none;
none;
none;
none;
none;
none;
none;
none;
submit data
893.489 C55 H72 Mg N4 O5 CCC1=...
DGD A:802;
B:802;
C:802;
Invalid;
Invalid;
Invalid;
none;
none;
none;
submit data
949.299 C51 H96 O15 CCCCC...
LHG A:801;
B:801;
C:801;
Invalid;
Invalid;
Invalid;
none;
none;
none;
submit data
722.97 C38 H75 O10 P CCCCC...
LUX A:501;
A:502;
B:501;
B:502;
C:501;
C:502;
Valid;
Valid;
Valid;
Valid;
Valid;
Valid;
none;
none;
none;
none;
none;
none;
submit data
584.998 C40 H72 O2 CC1=C...
NEX A:503;
B:503;
C:503;
Valid;
Valid;
Valid;
none;
none;
none;
submit data
600.87 C40 H56 O4 CC(=C...
XAT A:504;
B:504;
C:504;
Valid;
Valid;
Valid;
none;
none;
none;
submit data
600.87 C40 H56 O4 C/C(=...
View in 3D viewer
90% Homology Family
Leader
PDB id Resolution Class Description Source Keywords
2BHW 2.5 Å NON-ENZYME: BINDING PEA LIGHT-HARVESTING COMPLEX II AT 2.5 ANGSTROM RESOLUTION PISUM SATIVUM LHC-II PHOTOSYNTHESIS LIGHT-HARVESTING MEMBRANE PROTEIN CHLOROPHYLL CHLOROPLAST CHROMOPHORE MEMBRANE PHOSPHORYLATION PHOTOSYSTEM I PHOTOSYSTEM II PLASTID THYLAKOID TRANSIT PEPTIDE TRANSMEMBRANE
Ref.: MECHANISMS OF PHOTOPROTECTION AND NONPHOTOCHEMICAL QUENCHING IN PEA LIGHT-HARVESTING COMPLEX AT 2.5 A RESOLUTION. EMBO J. V. 24 919 2005
Members (1)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 510 families.
1 2BHW - LUX C40 H72 O2 CC1=C(C(C[....
70% Homology Family (1)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 391 families.
1 2BHW - LUX C40 H72 O2 CC1=C(C(C[....
50% Homology Family (1)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 298 families.
1 2BHW - LUX C40 H72 O2 CC1=C(C(C[....
Polypharmacology
Similar Ligands
Ligand no: 1; Ligand: LUX; Similar ligands found: 1
No: Ligand ECFP6 Tc MDL keys Tc
1 LUX 1 1
Ligand no: 2; Ligand: NEX; Similar ligands found: 3
No: Ligand ECFP6 Tc MDL keys Tc
1 NEX 1 1
2 XAT 0.666667 0.921053
3 PID 0.438017 0.818182
Ligand no: 3; Ligand: XAT; Similar ligands found: 2
No: Ligand ECFP6 Tc MDL keys Tc
1 XAT 1 1
2 NEX 0.666667 0.921053
Similar Binding Sites (Proteins are less than 50% similar to leader)
Pocket No.: 1; Query (leader) PDB : 2BHW; Ligand: LUX; Similar sites found with APoc: 19
This union binding pocket(no: 1) in the query (biounit: 2bhw.bio1) has 16 residues
No: Leader PDB Ligand Sequence Similarity
1 3RV5 DXC None
2 1NF8 BOG 3.38164
3 2HHP FLC 3.44828
4 1TV5 N8E 3.87931
5 1I0B PEL 4.74138
6 5I8F ML1 4.84848
7 1Q7E MET 5.17241
8 5LX9 OLB 5.60345
9 5E70 RCD 5.60345
10 4UMJ BFQ 6.08108
11 4MGA 27L 6.46552
12 4MG9 27K 6.46552
13 6CB2 OLC 6.89655
14 3KJS DQ1 7.32759
15 6BOC EU7 7.40741
16 6BOC RIM 7.40741
17 3DST GRG 7.75862
18 3TDC 0EU 8.18966
19 4OGQ 7PH 20.5882
Pocket No.: 2; Query (leader) PDB : 2BHW; Ligand: XAT; Similar sites found with APoc: 146
This union binding pocket(no: 2) in the query (biounit: 2bhw.bio1) has 8 residues
No: Leader PDB Ligand Sequence Similarity
1 5WZU 7W3 None
2 4EOY ASN ASP TRP LEU LEU PRO SER TYR None
3 5OWC AYZ None
4 2ALG DAO None
5 5EE7 5MV 1.32743
6 1KNR FAD 1.72414
7 1A8R GTP 1.80995
8 2G5C NAD 2.15517
9 3GGO NAI 2.15517
10 3B99 U51 2.15517
11 5C2H 4XU 2.15517
12 2J4D FAD 2.15517
13 2VZZ SCA 2.29358
14 1FQ5 0GM 2.58621
15 5B25 4QJ 2.58621
16 4V3I ASP LEU THR ARG PRO 2.58621
17 5NEA 8V8 2.58621
18 1YUC EPH 2.58621
19 1M5B BN1 2.58621
20 5EY0 GTP 2.58621
21 3NB0 G6P 2.58621
22 6BMS POV 2.58621
23 2DSA GSH 2.95567
24 2DSA HPX 2.95567
25 3G5N PB2 3.01724
26 3HAZ FAD 3.01724
27 5EXW 7DT 3.01724
28 4M52 M52 3.01724
29 4R6W PC 3.01724
30 6BHV DQV 3.01724
31 5K53 STE 3.01724
32 5L7G 6QE 3.01724
33 1LEK GLU GLN TYR LYS PHE TYR SER VAL 3.0303
34 6G5J EM8 3.0303
35 4RC8 STE 3.15315
36 3ENG CBI 3.28639
37 5LD8 6U5 3.44828
38 4I6G FAD 3.44828
39 4ZVV NAD 3.44828
40 4ZVV GN0 3.44828
41 2VL8 UDP 3.44828
42 2VL8 CTS 3.44828
43 1BII ARG GLY PRO GLY ARG ALA PHE VAL THR ILE 3.44828
44 2E2R 2OH 3.44828
45 1UUO BRF 3.44828
46 1UUO FMN 3.44828
47 1UUO ORO 3.44828
48 3FAL LO2 3.44828
49 5HGZ ACO 3.44828
50 1NP7 FAD 3.44828
51 3Q78 FPS 3.44828
52 4B7P 9UN 3.47826
53 4J7Q B7N 3.87931
54 1E5Q NDP 3.87931
55 6AYB KKK 3.87931
56 5O2N NAG NAG NDG NAG 4.31034
57 4LY9 1YY 4.31034
58 4LY9 S6P 4.31034
59 5K0A FAD 4.31034
60 1S7G APR 4.31034
61 4G2R H1L 4.31034
62 2H7C COA 4.31034
63 5NTP 98E 4.31034
64 5CFT APC 4.32432
65 5CFT 51G 4.32432
66 2CJF RP4 4.4586
67 2QZT PLM 4.5045
68 3WR7 COA 4.70588
69 6ARJ BW4 4.74138
70 6ARJ SAH 4.74138
71 5XDT ZI7 4.74138
72 1YMT DR9 4.74138
73 4ELG 52J 4.81928
74 3R5Z F42 4.82759
75 1SMR PIV HIS PRO PHE HIS LPL TYR TYR SER 5.17241
76 5AZC PGT 5.17241
77 5LIA 6XN 5.17241
78 1TFZ 869 5.17241
79 1TIW TFB 5.17241
80 1TIW FAD 5.17241
81 5GUE GGS 5.17241
82 1BOB ACO 5.60345
83 3KFC 61X 5.60345
84 4PVV HO4 5.60345
85 4GU5 FAD 5.60345
86 3OV6 MK0 5.60345
87 1UA7 ACI GLD GLC ACI G6D BGC 5.60345
88 5LX6 78P 5.75916
89 4H6U ACO 6
90 2P4Y C03 6.03448
91 4C3Y FAD 6.03448
92 3G9E RO7 6.03448
93 5ECP ATP 6.46552
94 3ULK NDP 6.46552
95 4MIX UD1 6.46552
96 5ECP MET 6.46552
97 5ECP JAA 6.46552
98 5WGQ EST 6.46552
99 1CMC SAM 6.73077
100 1HK8 DGT 6.89655
101 1N83 CLR 6.89655
102 5JCM ISD 7.32759
103 5JCM FAD 7.32759
104 5JCM NAD 7.32759
105 3OLL EST 7.32759
106 4CVZ TYR GLU LEU ASP GLU LYS PHE ASP ARG LEU 7.32759
107 1MZC FPP 7.75862
108 1MZC BNE 7.75862
109 3DST GRG 7.75862
110 4LSJ LSJ 7.75862
111 5X3R 7Y3 7.80488
112 1PFK ADP 8.18966
113 3L9R L9Q 8.18966
114 5KOR GDP 8.18966
115 4X6F 3XU 8.57143
116 3R5Y F42 8.84354
117 3QFJ LEU LEU PHE GLY PHE PRO VAL TYR VAL 9
118 6GH1 ARG LEU PRO ALA LYS ALA PRO LEU LEU 9
119 1PS9 FAD 9.05172
120 6BJ3 ILE PRO LEU THR GLU GLU ALA GLU LEU 9.09091
121 4ZAL 4LR 9.09091
122 4ZAL FNR 9.09091
123 5U98 1KX 9.09091
124 5XS3 VAL ARG SER ARG ARG CYS LEU ARG LEU 9.18367
125 1XVB BHL 9.48276
126 4HWT 1B2 9.48276
127 2EVL GAL SPH EIC 10.0478
128 5IF4 6AK 10.0629
129 2IXB A2G 10.3448
130 3FAP ARD 10.6383
131 3I6I NDP 10.7759
132 3JUQ AJD 10.8108
133 3JUQ AKD 10.8108
134 4KVX ACO 10.8974
135 4I7E PEP 12.069
136 1TED MYR 12.069
137 2YPO PHE 12.931
138 4Y30 49L 14.2241
139 4Y30 SAH 14.2241
140 5IVX ARG GLY PRO GLY ARG ALA PHE VAL THR ILE 15.4639
141 5ABF XRJ 15.5172
142 4L9P FII 16.3793
143 4OGQ 7PH 20.5882
144 2DYR PGV 21.1765
145 2DYS PGV 21.1765
146 5KF6 FAD 27.5862
Pocket No.: 3; Query (leader) PDB : 2BHW; Ligand: XAT; Similar sites found with APoc: 19
This union binding pocket(no: 3) in the query (biounit: 2bhw.bio1) has 8 residues
No: Leader PDB Ligand Sequence Similarity
1 4DE3 DN8 1.72414
2 2B4D COA 1.75439
3 5EHZ 5NZ 2.58621
4 1JQI CAA 2.58621
5 6CQW HI6 2.58621
6 1EFY BZC 3.01724
7 4ZDC CO8 3.01724
8 1EWF PC1 3.44828
9 5BRE 4UZ 4.74138
10 5FVJ ACO 4.81928
11 4O8A FAD 5.17241
12 6BQK Z1E 5.47945
13 3IPQ 965 6.03448
14 1FM9 9CR 6.03448
15 2PRG BRL 6.03448
16 3WHB DCC 7.2165
17 4MSG 2C6 7.75862
18 5C0C ARG GLN PHE GLY PRO ASP TRP ILE VAL ALA 9
19 4J3L AJ5 10.9524
Pocket No.: 4; Query (leader) PDB : 2BHW; Ligand: LUX; Similar sites found with APoc: 1
This union binding pocket(no: 4) in the query (biounit: 2bhw.bio1) has 16 residues
No: Leader PDB Ligand Sequence Similarity
1 1M2Z BOG 7.75862
Pocket No.: 5; Query (leader) PDB : 2BHW; Ligand: NEX; Similar sites found with APoc: 658
This union binding pocket(no: 5) in the query (biounit: 2bhw.bio1) has 8 residues
No: Leader PDB Ligand Sequence Similarity
1 2QHD DAO None
2 5WZU 7W3 None
3 5MT9 SRO None
4 5MT9 ARG None
5 4OAS 2SW None
6 4WG0 CHD None
7 4HBM 0Y7 None
8 4WT2 3UD None
9 3O01 DXC None
10 5N8V KZZ None
11 3KO0 TFP None
12 1ECM TSA None
13 2JFN UMA None
14 4EOY ASN ASP TRP LEU LEU PRO SER TYR None
15 2ZPA ACO 1.2931
16 4DOO DAO 1.46341
17 5CXI 5TW 1.47783
18 3KMR EQN 1.72414
19 3KMZ EQO 1.72414
20 4M8E 29V 1.7316
21 4POJ 2VP 1.7316
22 2B4D COA 1.75439
23 2CNT COA 1.875
24 3GWL FAD 1.88679
25 1R6N 434 1.89573
26 1FCZ 156 2.15517
27 4DM8 REA 2.15517
28 1DB1 VDX 2.15517
29 4G31 0WH 2.15517
30 3VRV YSD 2.15517
31 3LN0 52B 2.15517
32 5HCV 60R 2.15517
33 4CA5 3EF 2.15517
34 1DKF OLA 2.15517
35 5OSW DIU 2.15517
36 3B99 U51 2.15517
37 5OSW AE4 2.15517
38 1T8U UAP SGN IDS SGN 2.15517
39 4Q9M 2ZW 2.15517
40 4Q9M FPP 2.15517
41 1XRO LEU 2.15517
42 2A3I C0R 2.15517
43 4L1F COS 2.15517
44 1DKF BMS 2.15517
45 4UDB CV7 2.15517
46 5XPL 8C9 2.15517
47 2J4D FAD 2.15517
48 4OAR 2S0 2.15517
49 2O4J VD4 2.15517
50 2C5A NAD 2.15517
51 2C5A GDC 2.15517
52 1SR7 MOF 2.15517
53 5F5N 5VD 2.15517
54 2CIX CEJ 2.15517
55 5Y24 GLY MET PRO ARG GLY ALA 2.15517
56 1GHE ACO 2.25989
57 2VZZ SCA 2.29358
58 4RHE FMN 2.39234
59 4XPL ACO 2.45399
60 1V0C ACO 2.47525
61 1V0C KNC 2.47525
62 1S8G DAO 2.47934
63 5CSD ACD 2.51572
64 2GBB CIT 2.5641
65 4UA3 COA 2.57732
66 3LEO GSH 2.58065
67 4WPF 3SN 2.58621
68 5NI5 8YB 2.58621
69 6ESN BWE 2.58621
70 3V49 PK0 2.58621
71 4V3I ASP LEU THR ARG PRO 2.58621
72 5APK 76E 2.58621
73 1YUC EPH 2.58621
74 3SFI 3SF 2.58621
75 2J07 FAD 2.58621
76 2J07 HDF 2.58621
77 2AX9 BHM 2.58621
78 4KVL PLM 2.58621
79 1YOK P6L 2.58621
80 4P42 PEE 2.58621
81 1TMX HGX 2.58621
82 4Q0P 0MK 2.58621
83 4F7E 0SH 2.58621
84 3LDW IPE 2.58621
85 3LDW ZOL 2.58621
86 5EP2 AZU 2.58621
87 5FAL COA 2.58621
88 5FAL SKT 2.58621
89 2E9L BGC 2.58621
90 2E9L OLA 2.58621
91 2E9L PLM 2.58621
92 4IHL 1F5 2.58621
93 5B25 4QJ 2.58621
94 1MRH FMC 2.58621
95 5UNJ RJW 2.58621
96 5TO8 7FM 2.58621
97 5X8Q 82R 2.58621
98 4OHU NAD 2.58621
99 4OHU 2TK 2.58621
100 1ZDU P3A 2.58621
101 3G5D 1N1 2.58621
102 3RY9 1CA 2.58621
103 3ICS COA 2.58621
104 5DB3 58Q 2.58621
105 1JQI CAA 2.58621
106 4WUP 3UF 2.58621
107 3NB0 G6P 2.58621
108 5EY0 GTP 2.58621
109 4MRV HGD 2.58621
110 4DR9 BB2 2.60417
111 4WN5 MVC 2.6087
112 5IXK 6EW 2.63158
113 3OJI PYV 2.6455
114 4YC9 4C1 2.71739
115 4QC6 30N 2.7933
116 5A4W QCT 2.83019
117 3JRS A8S 2.88462
118 1T57 FMN 2.91262
119 1ATL 0QI 2.9703
120 5E7V M7E 3.01724
121 5LGA 6VH 3.01724
122 5FM0 WAQ 3.01724
123 4Q0A GLY HIS LYS ILE LEU HIS ARG LEU LEU GLN 3.01724
124 5K53 STE 3.01724
125 5K52 OCD 3.01724
126 4PJT 2YQ 3.01724
127 3G5N PB2 3.01724
128 4WAS COO 3.01724
129 5EK3 5PK 3.01724
130 5MWY YNU 3.01724
131 4R6W PC 3.01724
132 5L7G 6QE 3.01724
133 1RYI FAD 3.01724
134 5EXW 7DT 3.01724
135 2Q0D ATP 3.01724
136 1RYI GOA 3.01724
137 3WDM ADN 3.01724
138 2Q1H AS4 3.01724
139 4Q0A 4OA 3.01724
140 4FC7 COA 3.01724
141 4FC7 NAP 3.01724
142 4L2H AR6 AR6 3.01724
143 4M52 M52 3.01724
144 8CAT NDP 3.01724
145 5EOB 5QQ 3.01724
146 4WAS NAP 3.01724
147 3G08 FEE 3.0303
148 1LEK GLU GLN TYR LYS PHE TYR SER VAL 3.0303
149 1WWZ ACO 3.14465
150 4RC8 STE 3.15315
151 5JNN 6LM 3.15789
152 4EKQ NPO 3.20856
153 3QLM PLM 3.22581
154 5N26 CPT 3.2967
155 3QKD HI0 3.31492
156 2XEM SSV 3.33333
157 3O76 GTB 3.34928
158 1NF8 BOG 3.38164
159 1BUC CAA 3.39426
160 3ZJ0 ACO 3.39806
161 4GFD 0YB 3.41463
162 3FAL REA 3.44828
163 4ZVV GN0 3.44828
164 4ZVV NAD 3.44828
165 5HGR 45D 3.44828
166 1N46 PFA 3.44828
167 6BR8 PGV 3.44828
168 1M13 HYF 3.44828
169 3FAL LO2 3.44828
170 5DKK FMN 3.44828
171 4DHY S41 3.44828
172 1YC4 43P 3.44828
173 4I6G FAD 3.44828
174 1EWF PC1 3.44828
175 2Q2Y ADP 3.44828
176 2Q2Y MKR 3.44828
177 5DUF G7A 3.44828
178 3W54 RNB 3.44828
179 2G86 UMP 3.44828
180 2PSJ CEI 3.44828
181 2E2R 2OH 3.44828
182 4WZ8 3W7 3.44828
183 1BII ARG GLY PRO GLY ARG ALA PHE VAL THR ILE 3.44828
184 1N1G BCP 3.44828
185 3NMV PYV 3.44828
186 4IGH 1EA 3.44828
187 4IGH FMN 3.44828
188 4IGH ORO 3.44828
189 1UUO BRF 3.44828
190 1UUO ORO 3.44828
191 1UUO FMN 3.44828
192 1NP7 FAD 3.44828
193 4IA6 EIC 3.44828
194 5HGZ ACO 3.44828
195 3F3E LEU 3.44828
196 6BR8 6OU 3.44828
197 1J1R ADE 3.44828
198 1NRL SRL 3.44828
199 1O6U PLM 3.44828
200 2AOU CQA 3.44828
201 2QES ADE 3.44828
202 5ICE SAH 3.44828
203 1BKC INN 3.44828
204 2HHP FLC 3.44828
205 4B7P 9UN 3.47826
206 6GL8 F3Q 3.48837
207 2YI0 YI0 3.49345
208 3EWK FAD 3.52423
209 4LWU 20U 3.52941
210 1YRE COA 3.5533
211 6B5Q PPI CZS 2KY MLY 1XY 3.55556
212 4QVX 3CQ 3.59281
213 4ZB8 GDS 3.6036
214 4UME KDO 3.62694
215 5UC4 83S 3.63636
216 3IX9 MTX 3.68421
217 4D7M TDC 3.68664
218 1YKI NFZ 3.68664
219 1YKI FMN 3.68664
220 4DOL PLM 3.68664
221 5X13 HC4 3.7234
222 2DRC MTX 3.77358
223 3ZLR X0B 3.79747
224 5UR6 8KM 3.8674
225 1OLM VTQ 3.87931
226 4OMJ 2TX 3.87931
227 3WYJ H78 3.87931
228 3RWP ABQ 3.87931
229 4I4B NAD 3.87931
230 4I4B 1CV 3.87931
231 1TV5 N8E 3.87931
232 1H9G COA MYR 3.87931
233 4J7Q B7N 3.87931
234 4ORM ORO 3.87931
235 4ORM 2V6 3.87931
236 4ORM FMN 3.87931
237 5DEY 59T 3.87931
238 4X9M FAD 3.87931
239 3GYT DL4 3.87931
240 5DRB 5FJ 3.87931
241 2GMH UQ5 3.87931
242 6C7D EOJ 3.87931
243 3L9W GSH 3.87931
244 4PFC 2QX 3.87931
245 4OYA 1VE 3.87931
246 3B96 MYA 3.87931
247 4HGP KDO 3.88889
248 3IS2 FAD 3.8961
249 6FS8 E4Z 3.90244
250 3RUG DB6 3.92157
251 3COW 52H 3.98671
252 5HH0 COA 4
253 2JEV NHQ 4.02299
254 3D72 FAD 4.02685
255 1SO2 666 4.04762
256 5CYV WCA 4.10959
257 3OU2 SAH 4.12844
258 1L6O SER LEU LYS LEU MET THR THR VAL 4.21053
259 2VBQ BSJ 4.24242
260 2LBD REA 4.31034
261 5NTW 98N 4.31034
262 3DCT 064 4.31034
263 3U3U EAH 4.31034
264 5NTP 98E 4.31034
265 2H7C COA 4.31034
266 5B4B LP5 4.31034
267 3QUZ QUV 4.31034
268 5K0A FAD 4.31034
269 3SCM LGN 4.31034
270 3BEJ MUF 4.31034
271 2WPW ACO 4.31034
272 4LY9 1YY 4.31034
273 4LY9 S6P 4.31034
274 5XK9 DMA 4.31034
275 2WPX ACO 4.31034
276 5XK9 GST 4.31034
277 3P3G UKW 4.31034
278 3P3G 3P3 4.31034
279 5IBE 69M 4.31034
280 2UUU FAD 4.31034
281 2UUU PL3 4.31034
282 4CR6 MAN 4.31034
283 4GAA BES 4.31034
284 1EE4 PRO ALA ALA LYS ARG VAL LYS LEU ASP 4.31034
285 4DXJ 0M9 4.31034
286 4DXJ IPE 4.31034
287 5O0B 9FE 4.32099
288 3E2M E2M 4.32432
289 5CFT APC 4.32432
290 5CFT 51G 4.32432
291 5XNA SHV 4.34783
292 3RUU 37G 4.36681
293 5ICK FEZ 4.36681
294 6A5Y 9CR 4.38596
295 6A5Y 9R0 4.38596
296 4OIV XX9 4.42478
297 1TIQ COA 4.44444
298 2QZT PLM 4.5045
299 5Z3I ADE 4.5283
300 3ZCB ATP 4.54545
301 4WQ2 3SU 4.62428
302 5TK8 7D5 4.63918
303 3WR7 COA 4.70588
304 3ETG GLU 4.74138
305 1YMT DR9 4.74138
306 1P0H COA 4.74138
307 1P0H ACO 4.74138
308 4AVB ACO 4.74138
309 5AE9 OKO 4.74138
310 5XDT ZI7 4.74138
311 5K04 COA 4.74138
312 2EIX FAD 4.74138
313 3EE4 MYR 4.74138
314 1ZDT PEF 4.74138
315 4YSX E23 4.74138
316 3T58 FAD 4.74138
317 5B0W 22B 4.74138
318 4QJR PIZ 4.74138
319 3ETG GTP 4.74138
320 3RDE OYP 4.74138
321 3ETG NDP 4.74138
322 4YSX EPH 4.74138
323 4Z87 GDP 4.74138
324 4DV8 0LX 4.74138
325 3QCP FAD 4.74138
326 4UNR QZE 4.7619
327 4ELG 52I 4.81928
328 4ELG 52J 4.81928
329 5FVJ ACO 4.81928
330 2IYG FMN 4.83871
331 4OR7 25U 4.84848
332 5I8F ML1 4.84848
333 2EV1 OLA 4.95496
334 5UC1 486 4.95496
335 1YRX FMN 4.95868
336 1DTL BEP 4.96894
337 5W7D PX8 5.17241
338 3D9F FAD 5.17241
339 5AZC PGT 5.17241
340 3D9F N6C 5.17241
341 2XMY CDK 5.17241
342 1NQ7 ARL 5.17241
343 3FEI CTM 5.17241
344 3LLI FAD 5.17241
345 4AQL TXC 5.17241
346 6C1R EFD 5.17241
347 5GUE GGS 5.17241
348 5GOO FRU 5.17241
349 4QGE 35O 5.17241
350 1XON PIL 5.17241
351 5LUN ARG 5.17241
352 5LUN OGA 5.17241
353 4URL XAM 5.17241
354 5GOP FRU 5.17241
355 5ZM0 FAD 5.17241
356 1PZO CBT 5.17241
357 4O4K 2PK 5.17241
358 6F6E PLM 5.17241
359 3G4G D71 5.17241
360 2IYA ZIO 5.17241
361 1DNP FAD 5.17241
362 4E90 7RG 5.17241
363 6B2M COA 5.17241
364 4YUS FMN 5.17241
365 1XM4 PIL 5.17241
366 1MHC FME TYR PHE ILE ASN ILE LEU THR LEU 5.17241
367 1YQZ FAD 5.17241
368 5OHJ 9VE 5.17241
369 3G58 988 5.17241
370 2RKN LP3 5.19481
371 3ND6 ATP 5.26316
372 4URN NOV 5.33333
373 4IBF 1D5 5.42636
374 2XCM ADP 5.43478
375 3G5K BB2 5.46448
376 1XW6 GSH 5.50459
377 6CHP F0Y 5.59006
378 5LX9 OLB 5.60345
379 3L0E G58 5.60345
380 2JJK R15 5.60345
381 3KFC 61X 5.60345
382 2XSU PIE 5.60345
383 3JZB 4HY 5.60345
384 3OV6 MK0 5.60345
385 1BOB ACO 5.60345
386 5NKB 8ZT 5.60345
387 3TGE TGE 5.60345
388 1BZL GCG 5.60345
389 6HH6 A3R 5.60345
390 4DK7 0KS 5.60345
391 4GU5 FAD 5.60345
392 4RKK GLC GLC GLC GLC GLC GLC 5.60345
393 4B7X NAP 5.60345
394 2FKW RG1 5.66038
395 2C3Q GTX 5.66802
396 3E85 BSU 5.6962
397 2UXI G50 5.71429
398 4YV5 SVR 5.7377
399 1VLH PNS 5.78035
400 4OD7 ACE PRO TRP ALA THR CYS ASP SER NH2 5.78947
401 4CRZ ACO 5.83942
402 5LS7 ACO 5.83942
403 5XJ7 87O 5.97015
404 5XJ8 NKO 5.97015
405 1FM9 9CR 6.03448
406 1FM9 570 6.03448
407 1RDT 570 6.03448
408 3IPQ 965 6.03448
409 3H0A D30 6.03448
410 5TWO 7MV 6.03448
411 2HFP NSI 6.03448
412 2PRG BRL 6.03448
413 4PGK Y69 6.03448
414 2P4Y C03 6.03448
415 5EW9 5VC 6.03448
416 3G9E RO7 6.03448
417 3QCJ NX4 6.03448
418 2X24 X24 6.03448
419 3O3O 2RH 6.03448
420 3T03 3T0 6.03448
421 3FUR Z12 6.03448
422 3ET3 ET1 6.03448
423 6BMM OLB 6.03448
424 3H0A 9RA 6.03448
425 4Q6R 30J 6.03448
426 1S17 GNR 6.11111
427 4F4P 0SB 6.22711
428 1FO0 ILE ASN PHE ASP PHE ASN THR ILE 6.25
429 4MNS 2AX 6.28931
430 5AAV GW5 6.46552
431 2NPA MMB 6.46552
432 4KCF AKM 6.46552
433 5HYR EST 6.46552
434 5WGD EST 6.46552
435 3P0K FAD 6.46552
436 2QE4 JJ3 6.46552
437 3UUD EST 6.46552
438 5DXE EST 6.46552
439 2BJ4 OHT 6.46552
440 1DMH LIO 6.46552
441 6BA2 7KM 6.46552
442 5WGQ EST 6.46552
443 2QA8 GEN 6.46552
444 4MGB XDH 6.46552
445 2QZO KN1 6.46552
446 4MG8 27J 6.46552
447 4MGD 27N 6.46552
448 4TUZ 36J 6.46552
449 4MG7 27H 6.46552
450 6D28 NEC 6.46552
451 2GFD RDA 6.46552
452 2BIF BOG 6.46552
453 2O1V ADP 6.46552
454 5DX3 EST 6.46552
455 4MGA 27L 6.46552
456 4MG9 27K 6.46552
457 5DXG EST 6.46552
458 4E2J MOF 6.46552
459 5ECP ATP 6.46552
460 5ECP JAA 6.46552
461 5ECP MET 6.46552
462 5UFS 1TA 6.46552
463 4TV1 36M 6.46552
464 3UUA 0CZ 6.46552
465 5BQI GSH 6.49351
466 5BQI 4UL 6.49351
467 4F4S EFO 6.57895
468 6CB2 OLC 6.89655
469 1N83 CLR 6.89655
470 5F1R 42O 6.89655
471 4XCL AGS 6.89655
472 2R4J FAD 6.89655
473 2R4J 13P 6.89655
474 3UST FAD 6.89655
475 3X01 AMP 6.89655
476 1HK8 DGT 6.89655
477 5BYK OAQ 6.89655
478 5BYK A3P 6.89655
479 4S15 4D8 6.89655
480 1QNF HDF 6.89655
481 1QNF FAD 6.89655
482 4I67 G G G RPC 6.89655
483 5D1R 56S 6.89655
484 4V1F BQ1 6.97674
485 5LXT GDP 6.99301
486 4B5P ACO 7
487 3GWN FAD 7.01754
488 4RYV ZEA 7.09677
489 1BGQ RDC 7.11111
490 3MBG FAD 7.19424
491 3WHB DCC 7.2165
492 4XOQ F42 7.24638
493 2BYC FMN 7.29927
494 6BR9 PGV 7.32759
495 3SP6 IL2 7.32759
496 2YJD YJD 7.32759
497 1U3R 338 7.32759
498 3OLL EST 7.32759
499 5IH1 6BQ 7.32759
500 5IH1 GDP 7.32759
501 5CJH 522 7.32759
502 4CVZ TYR GLU LEU ASP GLU LYS PHE ASP ARG LEU 7.32759
503 1YYE 196 7.32759
504 2I0G I0G 7.32759
505 4IVG ANP 7.32759
506 4J24 EST 7.32759
507 2ZYJ PGU 7.32759
508 6BR9 6OU 7.32759
509 4IPE ANP 7.32759
510 4J26 EST 7.32759
511 1UHK CZN 7.32984
512 1JR8 FAD 7.69231
513 5N7O 69Y 7.69231
514 3BQD DAY 7.75862
515 5G5W R8C 7.75862
516 4OPC PGT 7.75862
517 4OPC FDA 7.75862
518 4P6X HCY 7.75862
519 3DST GRG 7.75862
520 4LSJ LSJ 7.75862
521 5X3R 7Y3 7.80488
522 3U5S FAD 7.93651
523 2HJ3 FAD 8
524 3O55 FAD 8
525 6C7R EO4 8
526 2ASF CIT 8.0292
527 3V78 ET 8.17308
528 1K7L 544 8.18966
529 3KDU NKS 8.18966
530 3GZ9 D32 8.18966
531 4OKD GLC GLC GLC 8.18966
532 3L9R L9R 8.18966
533 2Z7I 742 8.18966
534 5KOR GDP 8.18966
535 3TDC 0EU 8.18966
536 3L9R L9Q 8.18966
537 4ZBR DIF 8.18966
538 4ZBR NPS 8.18966
539 3ER9 3AT 8.18966
540 4IAE 1DX 8.46561
541 4XU6 TDA 8.57143
542 4X6F 3XU 8.57143
543 4EJ1 FOL 8.95522
544 4RPO T6C 8.96861
545 1OGA GLY ILE LEU GLY PHE VAL PHE THR LEU 9
546 5JHD GLY ILE LEU GLY PHE VAL PHE THR LEU 9
547 4WO4 JLS 9
548 3QFJ LEU LEU PHE GLY PHE PRO VAL TYR VAL 9
549 6GH1 ARG LEU PRO ALA LYS ALA PRO LEU LEU 9
550 3QDJ ALA ALA GLY ILE GLY ILE LEU THR VAL 9
551 5C0C ARG GLN PHE GLY PRO ASP TRP ILE VAL ALA 9
552 5WRE 7TL 9.03226
553 1ZGA HMK 9.05172
554 5U98 VAL THR THR ASP ILE GLN VAL LYS VAL 9.09091
555 5WL1 D3D 9.09091
556 5T70 THR SER ASN LEU GLN GLU GLN ILE GLY TRP 9.09091
557 5U98 1KX 9.09091
558 3HUJ AGH 9.09091
559 4ZAL 4LR 9.09091
560 4ZAL FNR 9.09091
561 2RFX LEU SER SER PRO VAL THR LYS SER PHE 9.09091
562 6BJ3 ILE PRO LEU THR GLU GLU ALA GLU LEU 9.09091
563 5C9J STE 9.09091
564 5C9J DAO 9.09091
565 2A06 SMA 9.09091
566 2R40 20E 9.12547
567 5ISZ GLY ILE LEU GLY PHE VAL PHE THR LEU 9.18367
568 5XS3 VAL ARG SER ARG ARG CYS LEU ARG LEU 9.18367
569 4KOT CE3 9.25926
570 1XVB BHL 9.48276
571 1XVB 3BR 9.48276
572 3R9C ECL 9.48276
573 4E1N TQX 9.63855
574 3RMK BML 9.63855
575 6FX0 E9T 9.91379
576 3MG9 GHP 3MY 3FG GHP GHP OMY 3FG 9.91379
577 1N4H REA 9.91379
578 3AHQ FAD 9.91379
579 5J6A P46 9.91379
580 5OKL PAM 9.91379
581 5FUS DAO 9.91379
582 2QJY SMA 9.91379
583 4NAT ADP 10
584 4NAT 2W5 10
585 2EVL GAL SPH EIC 10.0478
586 6FS0 E4W 10.0629
587 5IF4 6AK 10.0629
588 4K49 HFQ 10.2941
589 3DBX PLM 10.3448
590 5JZI LYS LEU VAL ALA LEU GLY ILE ASN ALA VAL 10.4265
591 3K9U ACO 10.6918
592 5EEH P9P 10.7759
593 5F2T PLM 10.7759
594 2OBD PCW 10.7759
595 3GFZ FMN 10.7759
596 1M2T ADE 10.7759
597 3JUQ AKD 10.8108
598 3JUQ AJD 10.8108
599 4KVX ACO 10.8974
600 1NTV ASN PHE ASP ASN PRO VAL TYR ARG LYS THR 11.1842
601 1UBY DMA 11.2069
602 4G86 BNT 11.2069
603 2J8C U10 11.6379
604 2J8C SPO 11.6379
605 4BTB PRO PRO PRO PRO PRO PRO PRO PRO PRO 11.6379
606 2WPF WPF 11.6379
607 2D5Z L35 11.6438
608 2GJ3 FAD 11.6667
609 1Q2C COA 11.7284
610 4P3H 25G 11.9171
611 4CJN MUR 12.069
612 5LWY OLB 12.1495
613 3VHZ SOG 12.2137
614 2D5X L35 12.3288
615 2Q6B HR2 12.5
616 5V03 658 12.7517
617 1GNI OLA 12.931
618 2YPO PHE 12.931
619 2Q4V ACO 12.9412
620 2FR3 REA 13.1387
621 1OQC FAD 13.6
622 3KPE TM3 13.7255
623 1FK5 OLA 13.9785
624 4LBP 1WG 14
625 2RH1 CLR 14.2241
626 1OWB NAD 14.2241
627 4Y30 SAH 14.2241
628 4Y30 49L 14.2241
629 4OIC A8S 14.2241
630 5IVX ARG GLY PRO GLY ARG ALA PHE VAL THR ILE 15.4639
631 6GD6 EVB 15.7407
632 4R57 ACO 15.9091
633 5GK9 ACO 15.9483
634 6B21 C9V 16.3793
635 2PX6 DH9 16.3793
636 4OGQ 2WM 20.5882
637 4OGQ 7PH 20.5882
638 4OGQ SQD 20.5882
639 2DYR PGV 21.1765
640 5ZCO PGV 21.1765
641 2DYR TGL 21.1765
642 5Z84 PGV 21.1765
643 2DYS TGL 21.1765
644 5ZCO PEK 21.1765
645 5ZCO TGL 21.1765
646 5Z84 TGL 21.1765
647 5Z84 PEK 21.1765
648 2DYS PGV 21.1765
649 2DYR PEK 21.1765
650 2DYS PEK 21.1765
651 3CXH SMA 21.2598
652 4Y9J UCC 21.5517
653 2C9E PID 22.4138
654 2WOR 2AN 25
655 4DS8 A8S 25.8621
656 4LA7 A1O 25.8621
657 5JO1 6LM 25.8621
658 5LJ0 6XX 26.1538
Pocket No.: 6; Query (leader) PDB : 2BHW; Ligand: LUX; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 6) in the query (biounit: 2bhw.bio1) has 16 residues
No: Leader PDB Ligand Sequence Similarity
Pocket No.: 7; Query (leader) PDB : 2BHW; Ligand: NEX; Similar sites found with APoc: 29
This union binding pocket(no: 7) in the query (biounit: 2bhw.bio1) has 9 residues
No: Leader PDB Ligand Sequence Similarity
1 3S0E EOL None
2 5UGW GSH None
3 5C2H 4PX 2.15517
4 3VVY ET 2.57732
5 3B6C SDN 2.58621
6 5HWO HMG 2.58621
7 2E3N 6CM 3.01724
8 3FS1 MYR 3.04348
9 3L9W AMP 3.87931
10 5L13 6ZE 3.87931
11 3NBK PNS 3.9548
12 6GMN F4E 4.32099
13 5C1M OLC 4.8
14 3ANP DAO 4.90196
15 3ANP DCC 4.90196
16 5OLZ T4E 5.17241
17 2RH4 EMO 5.17241
18 3GWT 066 5.17241
19 5UC9 MYR 6.19469
20 3F8C HT1 6.34921
21 2P1C GG3 6.46552
22 4V1T ADP 8.18966
23 4U63 FAD 9.05172
24 5OJY 9XB 12.069
25 3VHZ L2P GLC MAN SGA 12.2137
26 4F97 GDP 12.931
27 2FYU FDN 16.0714
28 4QWT ACD 16.3793
29 3CX5 SMA 21.2598
Pocket No.: 8; Query (leader) PDB : 2BHW; Ligand: XAT; Similar sites found with APoc: 9
This union binding pocket(no: 8) in the query (biounit: 2bhw.bio1) has 8 residues
No: Leader PDB Ligand Sequence Similarity
1 2C5A NAD 2.15517
2 2C5A GDC 2.15517
3 3MQG ACO 3.125
4 5ICE 2H4 3.44828
5 1H9G COA MYR 3.87931
6 3ET3 ET1 6.03448
7 4E2J MOF 6.46552
8 4ZLU ADP 9.91379
9 4ZLU 4PW 9.91379
Pocket No.: 9; Query (leader) PDB : 2BHW; Ligand: LUX; Similar sites found with APoc: 40
This union binding pocket(no: 9) in the query (biounit: 2bhw.bio1) has 18 residues
No: Leader PDB Ligand Sequence Similarity
1 1UO4 PIH None
2 5ET3 60C None
3 4WG0 CHD None
4 1UO5 PIH None
5 3ZQE DXC 1.2931
6 1ZED PNP 2.15517
7 2BCG GER 2.58621
8 3NB0 G6P 2.58621
9 4MRP GSH 2.58621
10 5N26 CPT 3.2967
11 5DCH 1YO 3.64583
12 5GQX GLC GLC GLC 3.87931
13 5OCA 9QZ 3.96825
14 3E8T UQ8 4.09091
15 5B4B LP5 4.31034
16 6GMN F4E 4.32099
17 5TVI MYR 4.34783
18 5Z3I ADE 4.5283
19 5FPN KYD 4.74138
20 3TD3 GLY 4.87805
21 5AZC PGT 5.17241
22 3F8C HT1 6.34921
23 4F4S EFO 6.57895
24 4V1F BQ1 6.97674
25 5FJJ MAN 7.32759
26 1KJM ALA GLN PHE SER ALA SER ALA SER ARG 7.32759
27 4URX FK1 8.62069
28 5U98 1KX 9.09091
29 1XVB 3BR 9.48276
30 4RW3 TDA 9.91379
31 3MG9 GHP 3MY 3FG GHP GHP OMY 3FG 9.91379
32 4RW3 PLM 9.91379
33 3T6E UQ9 11.2069
34 4G86 BNT 11.2069
35 1F9P ESA ESA ESA 11.7647
36 5LWY OLB 12.1495
37 2D5X L35 12.3288
38 4OGQ 1O2 20.5882
39 2Y69 CHD 20.9302
40 5V4R MGT 29.0123
Pocket No.: 10; Query (leader) PDB : 2BHW; Ligand: LUX; Similar sites found with APoc: 5
This union binding pocket(no: 10) in the query (biounit: 2bhw.bio1) has 18 residues
No: Leader PDB Ligand Sequence Similarity
1 3KP6 SAL 1.98676
2 2GWH PCI 3.44828
3 5U97 PIT 4.31034
4 5X80 SAL 6.25
5 1FX8 BOG 11.6379
Pocket No.: 11; Query (leader) PDB : 2BHW; Ligand: LUX; Similar sites found with APoc: 11
This union binding pocket(no: 11) in the query (biounit: 2bhw.bio1) has 19 residues
No: Leader PDB Ligand Sequence Similarity
1 4DDY DN6 1.72414
2 2BO4 FLC 2.15517
3 3LN9 FLC 2.8777
4 2X2T GAL NGA 3.92157
5 5IUY BOG 4.63576
6 3W9F I3P 5.60345
7 6C0B MLI 8.62069
8 6GH1 ARG LEU PRO ALA LYS ALA PRO LEU LEU 9
9 4EHQ GBL 12.8378
10 4WOH 4NP 17.4699
11 6BYF CIT 25.2941
Pocket No.: 12; Query (leader) PDB : 2BHW; Ligand: NEX; Similar sites found with APoc: 25
This union binding pocket(no: 12) in the query (biounit: 2bhw.bio1) has 8 residues
No: Leader PDB Ligand Sequence Similarity
1 1ZEI CRS None
2 1UVC STE None
3 1JAY F42 1.41509
4 3IL6 B83 2.15517
5 3AQT RCO 2.15517
6 6BMS PLM 2.58621
7 1HG4 LPP 3.01724
8 1PZL MYR 3.01724
9 1LPD ADE 3.01724
10 3LSJ PLM COA 3.63636
11 3L41 LYS PRO SEP GLN GLU LEU 4.09091
12 5G57 6M5 4.31034
13 1YP0 PEF 4.74138
14 1XMU ROF 5.17241
15 1XMY ROL 5.17241
16 5CHR 4NC 5.83942
17 1RDT L79 6.03448
18 5VRH OLC 6.46552
19 3GN8 DEX 6.46552
20 2OKL BB2 6.48649
21 1UDY FAD 7.32759
22 5UXM TRP 7.75862
23 4M4Q 21A 8.29876
24 2GMV UN8 12.5
25 2Y69 CHD 20.9302
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