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Receptor
PDB id Resolution Class Description Source Keywords
2AGC 2.5 Å NON-ENZYME: TRANSCRIPT_TRANSLATE CRYSTAL STRUCTURE OF MOUSE GM2- ACTIVATOR PROTEIN MUS MUSCULUS CONSTRICTED LIPID BINDING POCKET LIPID BINDING PROTEIN
Ref.: CRYSTAL STRUCTURE ANALYSIS OF PHOSPHATIDYLCHOLINE-GM2-ACTIVATOR PRODUCT COMPLEXES EVIDENCE FOR HYDROLASE ACTIVITY. BIOCHEMISTRY V. 44 13510 2005
Ligand
Ligand Chain:Residue Validity Ligand Warnings Binding Data NGL Viewer Molecular Weight (Da) Formula SMILES
DAO A:2055;
A:2057;
Valid;
Valid;
none;
none;
submit data
200.318 C12 H24 O2 CCCCC...
MYR A:3045;
Valid;
none;
submit data
228.371 C14 H28 O2 CCCCC...
View in 3D viewer
90% Homology Family
Leader
PDB id Resolution Class Description Source Keywords
2AGC 2.5 Å NON-ENZYME: TRANSCRIPT_TRANSLATE CRYSTAL STRUCTURE OF MOUSE GM2- ACTIVATOR PROTEIN MUS MUSCULUS CONSTRICTED LIPID BINDING POCKET LIPID BINDING PROTEIN
Ref.: CRYSTAL STRUCTURE ANALYSIS OF PHOSPHATIDYLCHOLINE-GM2-ACTIVATOR PRODUCT COMPLEXES EVIDENCE FOR HYDROLASE ACTIVITY. BIOCHEMISTRY V. 44 13510 2005
Members (1)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 291 families.
1 2AGC - MYR C14 H28 O2 CCCCCCCCCC....
70% Homology Family (6)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 209 families.
1 2AG4 - LP3 C26 H55 N O7 P CCCCCCCCCC....
2 1TJJ - DAO C12 H24 O2 CCCCCCCCCC....
3 2AG9 - MYR C14 H28 O2 CCCCCCCCCC....
4 2AF9 - MYR C14 H28 O2 CCCCCCCCCC....
5 2AG2 - DAO C12 H24 O2 CCCCCCCCCC....
6 2AGC - MYR C14 H28 O2 CCCCCCCCCC....
50% Homology Family (6)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 174 families.
1 2AG4 - LP3 C26 H55 N O7 P CCCCCCCCCC....
2 1TJJ - DAO C12 H24 O2 CCCCCCCCCC....
3 2AG9 - MYR C14 H28 O2 CCCCCCCCCC....
4 2AF9 - MYR C14 H28 O2 CCCCCCCCCC....
5 2AG2 - DAO C12 H24 O2 CCCCCCCCCC....
6 2AGC - MYR C14 H28 O2 CCCCCCCCCC....
Polypharmacology
Similar Ligands
Ligand no: 1; Ligand: DAO; Similar ligands found: 62
No: Ligand ECFP6 Tc MDL keys Tc
1 MYR 1 1
2 EW8 1 1
3 TDA 1 1
4 F15 1 1
5 PLM 1 1
6 STE 1 1
7 X90 1 1
8 DAO 1 1
9 KNA 1 1
10 DCR 1 1
11 F23 1 1
12 11A 1 1
13 DKA 1 1
14 OCA 0.956522 1
15 SHV 0.833333 0.952381
16 KTC 0.793103 0.875
17 AZ1 0.73913 0.64
18 6NA 0.72 0.904762
19 ELA 0.71875 0.954545
20 OLA 0.71875 0.954545
21 NER 0.71875 0.954545
22 VCA 0.666667 0.954545
23 PAM 0.666667 0.954545
24 PML 0.625 0.6
25 3LA 0.606061 0.8
26 LEA 0.6 0.809524
27 MYZ 0.588235 0.909091
28 12H 0.586207 0.615385
29 ODD 0.567568 0.913043
30 BRC 0.566667 0.666667
31 14V 0.555556 0.740741
32 M12 0.545455 0.869565
33 14U 0.542857 0.703704
34 EIC 0.538462 0.913043
35 EOD 0.538462 0.7
36 D0G 0.5 0.954545
37 BMJ 0.5 0.954545
38 BNV 0.5 0.954545
39 BUA 0.48 0.666667
40 RCL 0.468085 0.84
41 FTT 0.459459 0.807692
42 HXD 0.459459 0.807692
43 56S 0.459459 0.653846
44 ODT 0.452381 0.782609
45 3X1 0.444444 0.818182
46 LNL 0.44186 0.826087
47 9J6 0.441176 0.666667
48 OOA 0.441176 0.76
49 CUY 0.435897 0.68
50 6UL 0.435897 0.68
51 CNS 0.435897 0.68
52 5UF 0.432432 0.807692
53 243 0.428571 0.807692
54 1QW 0.418605 0.606061
55 GYM 0.418605 0.606061
56 O8N 0.413793 0.75
57 1DO 0.413793 0.75
58 PL3 0.413793 0.75
59 OC9 0.413793 0.75
60 DE1 0.413793 0.75
61 F09 0.413793 0.75
62 T25 0.403846 0.677419
Ligand no: 2; Ligand: MYR; Similar ligands found: 62
No: Ligand ECFP6 Tc MDL keys Tc
1 MYR 1 1
2 EW8 1 1
3 TDA 1 1
4 F15 1 1
5 PLM 1 1
6 STE 1 1
7 X90 1 1
8 DAO 1 1
9 KNA 1 1
10 DCR 1 1
11 F23 1 1
12 11A 1 1
13 DKA 1 1
14 OCA 0.956522 1
15 SHV 0.833333 0.952381
16 KTC 0.793103 0.875
17 AZ1 0.73913 0.64
18 6NA 0.72 0.904762
19 ELA 0.71875 0.954545
20 OLA 0.71875 0.954545
21 NER 0.71875 0.954545
22 VCA 0.666667 0.954545
23 PAM 0.666667 0.954545
24 PML 0.625 0.6
25 3LA 0.606061 0.8
26 LEA 0.6 0.809524
27 MYZ 0.588235 0.909091
28 12H 0.586207 0.615385
29 ODD 0.567568 0.913043
30 BRC 0.566667 0.666667
31 14V 0.555556 0.740741
32 M12 0.545455 0.869565
33 14U 0.542857 0.703704
34 EIC 0.538462 0.913043
35 EOD 0.538462 0.7
36 D0G 0.5 0.954545
37 BMJ 0.5 0.954545
38 BNV 0.5 0.954545
39 BUA 0.48 0.666667
40 RCL 0.468085 0.84
41 FTT 0.459459 0.807692
42 HXD 0.459459 0.807692
43 56S 0.459459 0.653846
44 ODT 0.452381 0.782609
45 3X1 0.444444 0.818182
46 LNL 0.44186 0.826087
47 9J6 0.441176 0.666667
48 OOA 0.441176 0.76
49 CUY 0.435897 0.68
50 6UL 0.435897 0.68
51 CNS 0.435897 0.68
52 5UF 0.432432 0.807692
53 243 0.428571 0.807692
54 1QW 0.418605 0.606061
55 GYM 0.418605 0.606061
56 O8N 0.413793 0.75
57 1DO 0.413793 0.75
58 PL3 0.413793 0.75
59 OC9 0.413793 0.75
60 DE1 0.413793 0.75
61 F09 0.413793 0.75
62 T25 0.403846 0.677419
Similar Binding Sites (Proteins are less than 50% similar to leader)
Pocket No.: 1; Query (leader) PDB : 2AGC; Ligand: DAO; Similar sites found with APoc: 284
This union binding pocket(no: 1) in the query (biounit: 2agc.bio1) has 15 residues
No: Leader PDB Ligand Sequence Similarity
1 2E56 MYR None
2 3NW7 LGV None
3 4PSB GA3 None
4 5WA9 9ZD None
5 5KK4 44E None
6 5I8T LAC 1.23457
7 4R38 RBF 1.42857
8 3WG3 A2G GAL NAG FUC 1.85185
9 4YGF AZM 1.85185
10 2HFN FMN 1.96078
11 5GP0 GPP 2.01342
12 4WVW SLT 2.08333
13 5BVS EIC 2.27273
14 1EWJ BLM 2.38095
15 4X5S AZM 2.46914
16 2YG2 S1P 2.46914
17 3FW9 SLX 2.46914
18 5L6G XYP 2.46914
19 4HIA FMN 2.46914
20 5ENQ 5QE 2.46914
21 5N87 N66 2.46914
22 2YG2 FLC 2.46914
23 3A16 PXO 2.46914
24 3MQG ACO 2.46914
25 2OBD 2OB 2.46914
26 2OG7 SIN 2.46914
27 5EO8 TFU 2.46914
28 3E85 BSU 2.53165
29 4RYV ZEA 2.58065
30 2PR5 FMN 3.0303
31 2Z6D FMN 3.07692
32 3FW3 ETS 3.08642
33 5ZM4 9FU 3.08642
34 5ZM4 AKG 3.08642
35 1WUB OTP 3.08642
36 4RFR RHN 3.08642
37 2GQS ADP 3.08642
38 5J75 6GQ 3.08642
39 2ET1 GLV 3.08642
40 2AXR ABL 3.08642
41 5UWA 8ND 3.08642
42 4MLO PAM 3.08642
43 4I42 1HA 3.08642
44 3PQB VGP 3.08642
45 4D5B ACX 3.08642
46 3H7J PPY 3.08642
47 1QIN GIP 3.08642
48 5JKG 6LF 3.08642
49 5LRT ADP 3.08642
50 3SAO NKN 3.125
51 2D6M LBT 3.14465
52 1ULE GLA GAL NAG 3.33333
53 3NV3 GAL NAG MAN 3.62319
54 6E08 NAP 3.7037
55 3MHA Z69 3.7037
56 4QA8 PJZ 3.7037
57 4P8K 38C 3.7037
58 4P8K FAD 3.7037
59 2GQR ADP 3.7037
60 5MZI FAD 3.7037
61 5MZI FYK 3.7037
62 4ORR PE3 3.7037
63 4YZC STU 3.7037
64 3PG7 PTY 3.7037
65 2XN3 ID8 3.7037
66 4QIJ 1HA 3.7037
67 2Y3S TIR 3.7037
68 1AUA BOG 3.7037
69 5H2D ERG 3.7037
70 5QIN J2V 3.7037
71 4IAW LIZ 3.7037
72 3I7V ATP 3.73134
73 3ZXE PGZ 3.7594
74 5H9Q TD2 3.87097
75 3IS2 FAD 3.8961
76 2CM4 RCL 4
77 5ML3 DL3 4.02685
78 3D72 FAD 4.02685
79 4G7A AZM 4.32099
80 3PFG SAM 4.32099
81 3PFG TLO 4.32099
82 4XIZ LPP 4.32099
83 5IVE 6E8 4.32099
84 5YBN AKG 4.32099
85 4L4J NAG NAG BMA MAN NAG 4.32099
86 2RG0 CTT 4.32099
87 6CDG PRO GLY LEU TRP LYS SER 4.32099
88 1OJJ GLC GAL 4.32099
89 1OJK GLC BGC 4.32099
90 3M3R BCD 4.32099
91 4GJ3 0XP 4.32099
92 1ZM1 BGC BGC BGC 4.32099
93 4KYS VIB 4.32099
94 6B9R 2HE 4.32099
95 5KD6 LBU 4.32099
96 4P25 FUC GAL NAG FUC 4.32099
97 3TM0 ANP 4.32099
98 3TM0 B31 4.32099
99 5KD6 6C7 4.32099
100 3VV1 GAL FUC 4.32099
101 2RFZ CTR 4.32099
102 3LXK MI1 4.32099
103 5NW7 9C2 4.32099
104 6GIN IR2 4.32099
105 2E3N 6CM 4.32099
106 4I4Z 2NE 4.32099
107 1OGX EQU 4.58015
108 1URX AAL GAL AAL GLA 4.60993
109 4WW8 VD9 4.93827
110 5E2N V14 4.93827
111 3EKK GS2 4.93827
112 4B1L FRU 4.93827
113 5UR6 8KM 4.93827
114 4OMJ 2TX 4.93827
115 5VC5 96M 4.93827
116 5HES 032 4.93827
117 3W68 VIV 4.93827
118 2VQ5 HBA 4.93827
119 1UNB AKG 4.93827
120 2XXP DSL 4.93827
121 4KBA 1QM 4.93827
122 1VJ7 GDP 4.93827
123 1OLM VTQ 4.93827
124 1Y7P RIP 4.93827
125 4MNS 2AX 5.03145
126 5ODY 9SK 5.07246
127 3WBG 2AN 5.22876
128 1MDC PLM 5.30303
129 3STK PLM 5.30303
130 1T27 PCW 5.55556
131 4COQ SAN 5.55556
132 5FQK 6NT 5.55556
133 5KEW 6SB 5.55556
134 2WA4 069 5.55556
135 5DRB 5FJ 5.55556
136 3RGA LSB 5.55556
137 4V24 GYR 5.55556
138 3H78 BE2 5.55556
139 1COY AND 5.55556
140 1EHI ADP 5.55556
141 4WHZ 3NL 5.55556
142 4LA7 A1O 5.55556
143 1ZB6 GST 5.55556
144 3THR C2F 5.55556
145 3TTI KBI 5.55556
146 1JE1 GMP 5.55556
147 4IEN GDP 5.55556
148 1H4H XYP XYS XYP 5.55556
149 2NAD NAD 5.55556
150 5OO5 UUA 5.64516
151 1DZK PRZ 5.73248
152 2GJ3 FAD 5.83333
153 5SVV FMN 5.83942
154 1A78 TDG 5.97015
155 1FDQ HXA 6.10687
156 1J3R 6PG 6.17284
157 2WSA MYA 6.17284
158 2WSA 646 6.17284
159 6H36 FKE 6.17284
160 1VA6 P2S 6.17284
161 4NW6 2NS 6.17284
162 4WOE ADP 6.17284
163 1VA6 ADP 6.17284
164 2ZMF CMP 6.17284
165 5INJ 6C7 6.17284
166 2ZRU FMN 6.17284
167 3NJV RAM GTR RAM GTR RAM GTR 6.17284
168 1OGZ EQU 6.4
169 3WUC GLC GAL 6.56934
170 2A1L PCW 6.79012
171 4QMN DB8 6.79012
172 2GC0 PAN 6.79012
173 1QY1 PRZ 6.79012
174 4J7Q B7N 6.79012
175 2PYW ADP 6.79012
176 3OZ2 OZ2 7.40741
177 5X7Q GLC GLC GLC GLC GLC 7.40741
178 1U18 HSM 7.40741
179 5VCV 1N1 7.40741
180 5FBN 5WF 7.40741
181 6GNO XDI 7.40741
182 4B1M FRU FRU 7.40741
183 1GT4 UNA 7.54717
184 5T7I LAT NAG GAL 7.74194
185 6FE1 V14 8.02469
186 1EWF PC1 8.02469
187 3WV6 GAL BGC 8.02469
188 5YU3 PRO 8.02469
189 5YU3 NAD 8.02469
190 2XK9 XK9 8.02469
191 2JDR L20 8.02469
192 2JDR GLY ARG PRO ARG THR THR SER PHE ALA GLU 8.02469
193 5Y72 DST 8.02469
194 1GQG DCD 8.02469
195 1PZO CBT 8.02469
196 2PUL ACP 8.02469
197 5NLD LBT 8.63309
198 4NFN 2KC 8.64198
199 4QDC ASD 8.64198
200 2HZQ STR 8.64198
201 5ISY NAD 8.64198
202 3HX3 RET 8.64198
203 2WEL K88 8.64198
204 1Y0G 8PP 8.64198
205 3ANY 2A3 8.64198
206 2YJ0 420 8.69565
207 2V0U FMN 8.90411
208 5DKK FMN 8.96552
209 4WO4 JLS 9
210 3FON VAL ASN ASP ILE PHE GLU ALA ILE 9
211 3VQ2 LP4 LP5 MYR DAO 9.02778
212 3L9R L9Q 9.18367
213 6GG9 FMN 9.25926
214 2X2M X2M 9.25926
215 5A3T MMK 9.25926
216 4P7X AKG 9.25926
217 4P7X YCP 9.25926
218 3FP0 FP0 9.25926
219 2WKQ FMN 9.25926
220 1IS3 LAT 9.62963
221 2OVW CBI 9.87654
222 4B2Z P5S 9.87654
223 3AGC RCC 9.87654
224 4S00 AKR 9.87654
225 3MTX PGT 9.93377
226 1Y2F WAI 10.0719
227 6A63 LAT 10.1449
228 5DJU FMN 10.3448
229 5EFW FMN 10.3448
230 5DJT FMN 10.3448
231 4WUP 3UF 10.4938
232 1DMY AZM 10.4938
233 1TT8 PHB 10.4938
234 5GLT BGC GAL NAG GAL 10.4938
235 1MHC FME TYR PHE ILE ASN ILE LEU THR LEU 10.4938
236 4CLI 5P8 10.4938
237 6G9I CXX 10.4938
238 5D48 L96 10.5263
239 3KOX Z98 10.7438
240 4J36 1HR 11.1111
241 2WT2 GAL NAG GAL NAG GAL NAG 11.1111
242 1GP6 QUE 11.1111
243 1GP6 SIN 11.1111
244 1GP6 DH2 11.1111
245 5H5A 6OU 11.1111
246 5CJF 520 11.7284
247 3QUZ QUV 11.7284
248 5LNE A2G GAL 11.7284
249 1GSA ADP 11.7284
250 4X9X OLA 11.7284
251 1N9L FMN 11.9266
252 4EES FMN 12.1739
253 2NNQ T4B 12.2137
254 4Y24 TD2 12.3377
255 4Q0P 0MK 12.3457
256 1ODM ASV 12.3457
257 1MH5 HAL 12.3457
258 2GJ5 VD3 12.963
259 3KFF ZBT 12.963
260 3KFF XBT 12.963
261 3E2M E2M 13.5802
262 4QCK ASD 13.5802
263 3OYW TDG 14.1791
264 1SQI 869 14.1975
265 2QL9 CIT 14.433
266 5TBM 79A 14.7826
267 5HCY 60D 14.8148
268 2QO4 CHD 15.0794
269 5HA0 LTD 15.3846
270 3PP0 03Q 15.4321
271 3VKC FPQ 15.4321
272 5XVG 8FX 16.0494
273 4K55 H6P 16.129
274 4USF 6UI 16.6667
275 1ZHX HC3 17.9012
276 1YKD CMP 19.1358
277 5FPX GLY SER SER HIS HIS HIS HIS HIS 19.469
278 4P5Z Q7M 20.3704
279 2Y6O 1N1 20.3704
280 2XVD AS6 20.9877
281 2H8H H8H 21.6049
282 5HZX 2GE 22.7273
283 4OPC FDA 22.8395
284 2P7Q GG6 25.5639
Pocket No.: 2; Query (leader) PDB : 2AGC; Ligand: DAO; Similar sites found with APoc: 190
This union binding pocket(no: 2) in the query (biounit: 2agc.bio1) has 12 residues
No: Leader PDB Ligand Sequence Similarity
1 3TTZ 07N None
2 5G48 1FL None
3 3NZ1 3NY None
4 2XBP ATP None
5 2ART LPA AMP 1.85185
6 1KRR ACO 1.85185
7 2QHS OCA 1.85185
8 2QHV OC9 1.85185
9 5HWV MBN 2.30769
10 3R96 ACO 2.46914
11 3R96 AMP 2.46914
12 4USI ATP 2.5974
13 4XMF HSM 3.08642
14 4B0T ADP 3.08642
15 5KOX RFP 3.08642
16 4GID 0GH 3.08642
17 3FW4 CAQ 3.08642
18 3KYF 5GP 5GP 3.08642
19 4MVK ACE VAL PHE PHE ALA GLU ASP NH2 3.08642
20 2TPI ILE VAL 3.08642
21 1VRP ADP 3.08642
22 5WO4 B7V 3.08642
23 5L2R MLA 3.08642
24 6BR9 6OU 3.08642
25 4L9I 8PR 3.08642
26 2RC5 FAD 3.08642
27 3SAO DBH 3.125
28 3KV8 FAH 3.59712
29 5TUF FAD 3.7037
30 5TUF TDC 3.7037
31 4OYA 1VE 3.7037
32 6ALW BNV 3.7037
33 6ALW BMJ 3.7037
34 3KYG 5GP 5GP 3.7037
35 2RDE C2E 3.7037
36 1MGP PLM 3.7037
37 1F9V ADP 3.7037
38 5D9G GLU ASN LEU TYR PHE GLN 3.7037
39 4E1Z 0MX 3.7037
40 1VPV PLM 3.7037
41 2WXD E18 3.7037
42 3ZXR P3S 3.7037
43 1KOR SIN 3.7037
44 4L3L 5FI 3.7037
45 2GTF P1R 3.7037
46 1KOR ARG 3.7037
47 1KOR ANP 3.7037
48 3QSB 743 3.7037
49 3ZXR IQ1 3.7037
50 5YJS SAL 3.7037
51 4ITH RCM 3.7037
52 4ONA UW1 3.7037
53 1T90 NAD 3.7037
54 2POC UD1 3.7037
55 3OQJ 3CX 3.7037
56 2Z3U CRR 4
57 1HXD BTN 4.32099
58 5H2U 1N1 4.32099
59 3W2E NAD 4.32099
60 3W2E FAD 4.32099
61 2Y6Q I7T 4.32099
62 5I7S E9P 4.32099
63 5I7S NAD 4.32099
64 3REU ATP 4.32099
65 3O0W MAN MAN MAN GLC 4.32099
66 5AHS COA 4.32099
67 3HXU A5A 4.32099
68 6CZI 38E 4.46429
69 5A89 FMN 4.48718
70 5A89 ADP 4.48718
71 4XTX 590 4.93827
72 5KJW 53C 4.93827
73 2C78 PUL 4.93827
74 4DQ2 BTX 4.93827
75 4CQE CQE 4.93827
76 5W4W 9WG 4.93827
77 2IU8 PLM 4.93827
78 6GAS FAD 4.93827
79 4N70 2HX 4.93827
80 5MY8 RXZ 4.93827
81 2E5A LAQ 4.93827
82 1UNB PN1 4.93827
83 6C0T EE4 4.93827
84 3LM9 FRU 4.93827
85 5AYT L6Y 5.03145
86 1VJY 460 5.55556
87 4YBN FAD 5.55556
88 4X3R 686 5.55556
89 6B3V 7DQ 5.55556
90 6B3V ANP 5.55556
91 1ZB6 DIN 5.55556
92 5UGH 8AJ 5.55556
93 4MO4 ACP 5.55556
94 1M15 ADP 5.55556
95 1M15 ARG 5.55556
96 5MW4 5JU 5.55556
97 3B6R ADP 5.55556
98 4QAC KK3 5.55556
99 2OJW ADP 5.55556
100 3CBC DBS 6.06061
101 5UXH GFB 6.17284
102 6GWR FEW 6.17284
103 1CLU DBG 6.17284
104 1HV9 COA 6.17284
105 2PNC CLU 6.17284
106 4YRI 4JH 6.17284
107 3GC8 B45 6.17284
108 1KGI T4A 6.29921
109 3EM0 CHD 6.52174
110 4OTH DRN 6.79012
111 3TKI S25 6.79012
112 3MF2 AMP 6.79012
113 3E9I XAH 6.79012
114 3GD9 GLC BGC BGC BGC 7.40741
115 4OHU NAD 7.61246
116 4OHU 2TK 7.61246
117 1V3S ATP 7.75862
118 1HDC CBO 8.02469
119 3JU6 ANP 8.02469
120 1OPB RET 8.20895
121 5O3Q CMP 8.33333
122 1UJP CIT 8.64198
123 1SDW IYT 8.64198
124 1IYE PGU 8.64198
125 3EFS BTN 9.25926
126 2RCU BUJ 9.25926
127 2WLG SOP 9.25926
128 1QD1 FON 9.25926
129 1LSH PLD 9.25926
130 2P1M IHP 9.375
131 2P1O NLA 9.375
132 2P1O IHP 9.375
133 4RT1 C2E 9.82143
134 4EMV 0R9 9.87654
135 5JIC N7E 9.87654
136 5JIC ADP 9.87654
137 1PNO NAP 9.87654
138 4Z87 GDP 10.4938
139 1W96 S1A 10.4938
140 1QKQ MAN 10.5634
141 4CS4 ANP 10.5839
142 4CS4 AXZ 10.5839
143 5UIU 8CG 11.1111
144 5F7R GLC GLC 11.1111
145 5ECP MET 11.1111
146 5ECP JAA 11.1111
147 5ECP ATP 11.1111
148 2DXU BT5 11.7284
149 1WPY BTN 11.7284
150 1UDY FAD 11.7284
151 1UDY CS8 11.7284
152 3G08 FEE 11.7284
153 3HKW IX6 12.3457
154 4RF7 ARG 12.3457
155 4MIB 28M 12.3457
156 5XLY C2E 12.3457
157 3JQ3 ADP 12.3457
158 4DXD 9PC 12.3457
159 4MOB ADP 12.3457
160 4BG4 ADP 12.3457
161 1EGD FAD 12.3457
162 5Y4R C2E 12.3457
163 5XDT ZI7 12.963
164 5LXT GTP 12.963
165 2YAK OSV 12.963
166 3RWP ABQ 12.963
167 1GTE IUR 12.963
168 1GTE FMN 12.963
169 3FYS PLM 12.963
170 5DYO FLU 12.963
171 5EJL C2E 13.5802
172 5UKL SIX 14.5161
173 5KY9 GDP 15
174 1KZN CBN 15.4321
175 6CDO ALA VAL GLY ILE GLY ALA VAL PHE 16.0494
176 4QYN RTL 16.5414
177 6BQC LOP 16.6667
178 1U6R ADP 16.6667
179 2JLD AG1 17.284
180 2ZTG A5A 17.9012
181 1OUK 084 18.5185
182 4LOO SB4 18.5185
183 3DLG GWE 18.5185
184 4F9C 0SX 18.75
185 2J9C ATP 19.3277
186 6H39 FGY 19.7531
187 4TWP AXI 23.4568
188 3G5D 1N1 24.0741
189 3VRY B43 24.0741
190 3H0L ADP 25.5319
Pocket No.: 3; Query (leader) PDB : 2AGC; Ligand: MYR; Similar sites found with APoc: 39
This union binding pocket(no: 3) in the query (biounit: 2agc.bio1) has 8 residues
No: Leader PDB Ligand Sequence Similarity
1 2E56 MYR None
2 2QZT PLM None
3 2XMY CDK 1.85185
4 2HFN FMN 1.96078
5 3UN3 G16 2.46914
6 4RYV ZEA 2.58065
7 1KDK DHT 3.08642
8 1WUB OTP 3.08642
9 5F2T PLM 3.08642
10 3X01 AMP 3.08642
11 4P8K FAD 3.7037
12 4P8K 38C 3.7037
13 5MZI FAD 3.7037
14 5MZI FYK 3.7037
15 3SLS 77D 3.7037
16 5ML3 DL3 4.02685
17 4XCB HY0 4.32099
18 3VC1 SAH 4.32099
19 3VC1 GST 4.32099
20 4MNS 2AX 5.03145
21 5WKC FAD 6.79012
22 2FDW D3G 7.40741
23 1MZC FPP 8.02469
24 1MZC BNE 8.02469
25 3VQ2 LP4 LP5 MYR DAO 9.02778
26 3DBX PLM 9.09091
27 1Q23 FUA 9.25926
28 3O9L LPN 9.87654
29 4J36 1HR 11.1111
30 4J36 FAD 11.1111
31 5H5A 6OU 11.1111
32 3G08 FEE 11.7284
33 3QUZ QUV 11.7284
34 3RUG DB6 12.3457
35 4Q0P 0MK 12.3457
36 4DOL PLM 16.6667
37 4OPC FDA 22.8395
38 4OPC PGT 22.8395
39 2P7Q GG6 25.5639
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