Receptor
PDB id Resolution Class Description Source Keywords
2A4W 1.5 Å NON-ENZYME: BINDING CRYSTAL STRUCTURE OF MITOMYCIN C-BINDING PROTEIN COMPLEXED WITH COPPER(II)-BLEOMYCIN A2 STREPTOMYCES CAESPITOSUS ALFA/BETA PROTEIN MITOMYCIN C-BINDING PROTEIN COPPER(II)- BLEOMYCIN A2 STRUCTURAL GENOMICS NPPSFA NATIONAL PROJECTON PROTEIN STRUCTURAL AND FUNCTIONAL ANALYSES ANTIMICROBIAL PROTEIN
Ref.: THE MITOMYCIN C (MMC)-BINDING PROTEIN FROM MMC-PRODUCING MICROORGANISMS PROTECTS FROM THE LETHAL EFFECT OF BLEOMYCIN: CRYSTALLOGRAPHIC ANALYSIS TO ELUCIDATE THE BINDING MODE OF THE ANTIBIOTIC TO THE PROTEIN J.MOL.BIOL. V. 360 398
Ligand
Ligand Chain:Residue Validity Ligand Warnings Binding Data NGL Viewer Molecular Weight (Da) Formula SMILES
BLM A:750;
Valid;
none;
submit data
1416.56 C55 H85 N17 O21 S3 Cc1c(...
CU A:751;
Invalid;
none;
submit data
63.546 Cu [Cu+2...
View in 3D viewer
90% Homology Family
Leader
PDB id Resolution Class Description Source Keywords
2A4W 1.5 Å NON-ENZYME: BINDING CRYSTAL STRUCTURE OF MITOMYCIN C-BINDING PROTEIN COMPLEXED WITH COPPER(II)-BLEOMYCIN A2 STREPTOMYCES CAESPITOSUS ALFA/BETA PROTEIN MITOMYCIN C-BINDING PROTEIN COPPER(II)- BLEOMYCIN A2 STRUCTURAL GENOMICS NPPSFA NATIONAL PROJECTON PROTEIN STRUCTURAL AND FUNCTIONAL ANALYSES ANTIMICROBIAL PROTEIN
Ref.: THE MITOMYCIN C (MMC)-BINDING PROTEIN FROM MMC-PRODUCING MICROORGANISMS PROTECTS FROM THE LETHAL EFFECT OF BLEOMYCIN: CRYSTALLOGRAPHIC ANALYSIS TO ELUCIDATE THE BINDING MODE OF THE ANTIBIOTIC TO THE PROTEIN J.MOL.BIOL. V. 360 398
Members (3)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 510 families.
1 2A4W - BLM C55 H85 N17 O21 S3 Cc1c(nc(nc....
2 1KLL - MC C14 H16 N4 O5 CC1=C(C(=O....
3 2A4X - BLM C55 H85 N17 O21 S3 Cc1c(nc(nc....
70% Homology Family (3)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 391 families.
1 2A4W - BLM C55 H85 N17 O21 S3 Cc1c(nc(nc....
2 1KLL - MC C14 H16 N4 O5 CC1=C(C(=O....
3 2A4X - BLM C55 H85 N17 O21 S3 Cc1c(nc(nc....
50% Homology Family (3)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 298 families.
1 2A4W - BLM C55 H85 N17 O21 S3 Cc1c(nc(nc....
2 1KLL - MC C14 H16 N4 O5 CC1=C(C(=O....
3 2A4X - BLM C55 H85 N17 O21 S3 Cc1c(nc(nc....
Polypharmacology
Similar Ligands
Ligand no: 1; Ligand: BLM; Similar ligands found: 2
No: Ligand ECFP6 Tc MDL keys Tc
1 BLM 1 1
2 52G 0.553648 0.855556
Similar Binding Sites (Proteins are less than 50% similar to leader)
Pocket No.: 1; Query (leader) PDB : 2A4W; Ligand: BLM; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 1) in the query (biounit: 2a4w.bio1) has 29 residues
No: Leader PDB Ligand Sequence Similarity
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