Receptor
PDB id Resolution Class Description Source Keywords
1Z9O 1.9 Å NON-ENZYME: BINDING 1.9 ANGSTROM CRYSTAL STRUCTURE OF THE RAT VAP-A MSP HOMOLOGY COMPLEX WITH THE RAT ORP1 FFAT MOTIF RATTUS NORVEGICUS VAP-33 VAP-A VAP-B VAP-C VAPA VAPB VAPC VAP-33A SCS2FFAT MOTIF ER ENDOPLASMIC RETICULUM TARGETING IMMUNOGLOLIKE BETA SHEET MSP HOMOLOGY DOMAIN OSBP ORP OXYSTEROL PROTEIN PROTEIN BINDING-LIPID BINDING PROTEIN COMPLEX
Ref.: STRUCTURAL BASIS OF FFAT MOTIF-MEDIATED ER TARGETIN STRUCTURE V. 13 1035 2005
Ligand
Ligand Chain:Residue Validity Ligand Warnings Binding Data NGL Viewer Molecular Weight (Da) Formula SMILES
SER GLU ASP GLU PHE TYR ASP ALA LEU SER G:473;
H:473;
I:473;
J:473;
K:473;
L:473;
Valid;
Valid;
Valid;
Valid;
Valid;
Valid;
none;
none;
none;
none;
none;
none;
submit data
1068.06 n/a O=C(N...
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90% Homology Family
Leader
PDB id Resolution Class Description Source Keywords
1Z9O 1.9 Å NON-ENZYME: BINDING 1.9 ANGSTROM CRYSTAL STRUCTURE OF THE RAT VAP-A MSP HOMOLOGY COMPLEX WITH THE RAT ORP1 FFAT MOTIF RATTUS NORVEGICUS VAP-33 VAP-A VAP-B VAP-C VAPA VAPB VAPC VAP-33A SCS2FFAT MOTIF ER ENDOPLASMIC RETICULUM TARGETING IMMUNOGLOLIKE BETA SHEET MSP HOMOLOGY DOMAIN OSBP ORP OXYSTEROL PROTEIN PROTEIN BINDING-LIPID BINDING PROTEIN COMPLEX
Ref.: STRUCTURAL BASIS OF FFAT MOTIF-MEDIATED ER TARGETIN STRUCTURE V. 13 1035 2005
Members (1)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 552 families.
1 1Z9O - SER GLU ASP GLU PHE TYR ASP ALA LEU SER n/a n/a
70% Homology Family (1)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 426 families.
1 1Z9O - SER GLU ASP GLU PHE TYR ASP ALA LEU SER n/a n/a
50% Homology Family (1)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 322 families.
1 1Z9O - SER GLU ASP GLU PHE TYR ASP ALA LEU SER n/a n/a
Polypharmacology
Similar Ligands (2D)
Ligand no: 1; Ligand: SER GLU ASP GLU PHE TYR ASP ALA LEU SER; Similar ligands found: 120
No: Ligand ECFP6 Tc MDL keys Tc
1 SER GLU ASP GLU PHE TYR ASP ALA LEU SER 1 1
2 ACE GLU ASN LEU TYR PHE GLN SER GLY THR 0.609756 0.854545
3 SER SER LEU GLU ASN PHE ALA ALA TYR VAL 0.558824 0.944444
4 ASP ALA ASP GLU TYR LEU 0.541667 0.865385
5 SER SER LEU GLU ASN PHE ARG ALA TYR VAL 0.540541 0.852459
6 ASP PHE GLN GLU SER ALA ASP SER PHE LEU 0.526718 0.924528
7 GLU GLU TYR LEU GLN ALA PHE THR TYR 0.525547 0.90566
8 ASP PHE GLU ASP TYR GLU PHE ASP 0.525 0.833333
9 GLU LEU ASP LYS TYR ALA SER 0.523077 0.925926
10 ASN ALA LEU LEU ARG TYR LEU LEU ASP 0.519084 0.786885
11 ALA ALA SER LEU TYR GLU LYS LYS ALA ALA 0.519084 0.875
12 ASP LEU TYR CYS TYR GLU GLN LEU ASN 0.519084 0.909091
13 GLU ASP GLU ASP PHE GLU ILE LEU SER LEU 0.518248 0.87037
14 THR ASN GLU PHE TYR ALA 0.508065 0.851852
15 TYR GLU LEU ASP GLU LYS PHE ASP ARG LEU 0.507042 0.819672
16 TYR LEU ASP SER GLY ILE HIS SER GLY ALA 0.504348 0.884615
17 THR GLU ASN LEU TYR PHE GLN SER GLY THR 0.496504 0.928571
18 THR ASN GLU PHE TYR PHE 0.495726 0.777778
19 SER LEU ARG PHE LEU TYR GLU GLY 0.492754 0.836066
20 GLU ASN LEU TYR PHE GLN 0.492188 0.87037
21 SER LEU PHE ASN THR VAL ALA THR LEU TYR 0.489362 0.888889
22 ASN GLN LEU ALA TRP PHE ASP THR ASP LEU 0.486486 0.779661
23 ALA GLU THR PHE TYR VAL ASP GLY 0.484615 0.886792
24 THR ASN GLU PHE ALA PHE 0.483051 0.703704
25 GLY ASN TYR SER PHE TYR ALA LEU 0.48062 0.875
26 GLU VAL TYR GLU SER 0.479339 0.884615
27 ASP ALA ASP GLU GLU ASP PHE 0.474576 0.769231
28 GLU ASP GLU ASP PHE GLU ILE LEU SEP LEU 0.472973 0.721311
29 ASP PHE GLU LYS GLU GLY TYR SER LEU 0.472603 0.912281
30 ASP SEP TYR GLU VAL LEU ASP LEU 0.468966 0.8
31 ALA ALA TRP LEU PHE GLU ALA 0.467626 0.706897
32 GLY ALA GLU VAL PHE TYR VAL ASP GLY ALA 0.467153 0.854545
33 ACE ASP ALA ASP GLU FTY LEU NH2 0.466165 0.66129
34 GLY ALA ASP ILE PHE TYR LEU ASP GLY ALA 0.466165 0.8
35 PHE LEU ALA TYR LYS 0.465116 0.87037
36 GLY ALA PHE THR PHE ASN GLU ASP PHE 0.461538 0.796296
37 GLU ASN GLN LYS GLU TYR PHE PHE 0.461538 0.789474
38 ALA GLN ASP ILE TYR ARG ALA SER TYR 0.456954 0.836066
39 VAL TYR ARG SER LEU SEP PHE GLU 0.455224 0.721311
40 GLY ALA ALA ARG ALA GLU VAL TYR LEU ARG 0.453333 0.770492
41 ARG PRO GLY ASN PHE LEU GLN SER SER PRO 0.452055 0.737705
42 GLU GLU GLN GLU GLU TYR 0.45045 0.769231
43 ASP ASN ARG LEU GLY LEU VAL TYR GLN PHE 0.448819 0.865385
44 ACE VAL PHE PHE ALA GLU ASP NH2 0.448 0.769231
45 ASP ALA GLU PHE ARG HIS ASP 0.447761 0.677966
46 GLY ALA GLU THR PHE TYR VAL ASP GLY ALA 0.447552 0.875
47 LYS ALA VAL TYR ASN PHE ALA THR MET 0.443662 0.793103
48 SER ILE TYR PHE TPO PRO GLU LEU TYR ASP 0.443114 0.702703
49 GLU GLU TYR LEU LYS ALA TRP THR PHE 0.441718 0.806452
50 PHE TYR ARG ALA LEU MET 0.440559 0.746032
51 ARG PRO GLY ASN PHE LEU GLN ASN ARG PRO 0.439716 0.645161
52 PHE GLU ASP LEU ARG LEU LEU SER PHE 0.439716 0.8
53 SER GLY ILE PHE LEU GLU THR SER 0.439394 0.851852
54 SER HIS PHE ASN GLU TYR GLU 0.438356 0.786885
55 LEU TYR ALA SER PRO GLN LEU GLU GLY PHE 0.435583 0.784615
56 ACE PHE ALA TYR M3L SER NH2 0.435115 0.78125
57 ALA TRP LEU PHE GLU ALA 0.434783 0.706897
58 THR PRO ASP TYR PHE LEU 0.434109 0.830508
59 GLU LEU ASP HOX TRP ALA SER 0.432432 0.8
60 ASP ASP ASP MET GLY PHE GLY LEU PHE ASP 0.432 0.777778
61 PHE LEU SER TYR LYS 0.431818 0.909091
62 LEU ASP GLU GLU THR GLY GLU PHE LEU 0.431655 0.836364
63 ASP ALA GLU PHE ARG HIS ASP SER 0.431507 0.621212
64 ARG VAL LEU PHE GLU ALA MET 0.431507 0.630769
65 THR ASN GLU TYR TYR VAL 0.429752 0.833333
66 GLY LEU TYR ALA SER LYS LEU ALA 0.428571 0.857143
67 VAL ASN ASP ILE PHE GLU ALA ILE 0.428571 0.745455
68 THR LYS ASN TYR LYS GLN PHE SER VAL 0.428571 0.910714
69 ASP ASP LEU ASP VAL PRO SER PHE LEU GLN 0.426667 0.712121
70 SER ALA ASN SER PHE THR LEU ILE GLY GLU 0.425676 0.821429
71 GLY ALA GLN THR PHE TYR VAL ASP GLY ALA 0.425532 0.890909
72 CYS THR GLU LEU LYS LEU SER ASP TYR 0.424658 0.892857
73 ASP GLU LEU GLU ILE LYS ALA TYR 0.423611 0.839286
74 PRO GLU SEP LEU GLU SER CYS PHE 0.423358 0.725806
75 PHE GLU ALA ILE PRO ALA GLU TYR LEU 0.423077 0.712121
76 VAL ALA PHE ARG SER 0.423077 0.694915
77 ARG ARG ILE TYR ASP LEU ILE GLU LEU 0.42 0.786885
78 THR ASN GLU TYR LYS VAL 0.419847 0.821429
79 ASP ALA ASP GLU FTY LEU NH2 0.419118 0.66129
80 ASP TYR GLU PRO ILE PRO GLU GLU ALA PHE 0.41875 0.716418
81 GLU GLN TYR LYS PHE TYR SER VAL 0.41844 0.892857
82 PRO ALA TRP LEU PHE GLU ALA 0.418301 0.709677
83 CYS THR GLU LEU LYS LEU ASN ASP TYR 0.417808 0.859649
84 SER PHE PHE GLU ASP ASN PHE VAL PRO GLU 0.417808 0.716418
85 LEU GLU PHE GLN GLY 0.417323 0.759259
86 ARG GLU ASP GLN GLU THR ALA VAL 0.417323 0.754717
87 ILE LEU ALA LYS PHE LEU HIS GLU LEU 0.416107 0.68254
88 PRO GLU GLY ASP PM3 GLU GLU VAL LEU 0.415493 0.704918
89 ACE ILE TYR GLU SER LEU 0.415385 0.87037
90 PHE LEU ARG GLY ARG ALA TYR GLY LEU 0.414966 0.816667
91 ARG LEU ASN PTR ALA GLN LEU TRP HIS ARG 0.414815 0.66129
92 ASP PHE GLU GLU ILE PRO GLY GLU TYR LEU 0.414634 0.731343
93 SER ASP TYR GLN ARG LEU 0.413534 0.79661
94 LEU SER PRO ASP SER PHE LEU ASN ASP 0.412281 0.735849
95 THR ASN LEU TYR MET LEU 0.411765 0.793103
96 SER SER ARG LYS GLU TYR TYR ALA 0.411765 0.754098
97 ARG PHE MET ASP TYR TRP GLU GLY LEU 0.411765 0.7
98 GLY ILE LEU GLU PHE VAL PHE THR LEU 0.411348 0.836364
99 SER VAL TYR ASP PHE PHE VAL TRP LEU 0.410596 0.847458
100 PHE GLU ASP LEU ARG VAL LEU SER PHE 0.410596 0.8
101 PHE GLU ASP LEU ARG VAL SER SER PHE 0.410596 0.8
102 ILE GLU GLU ALA LEU GLN ILE ILE HIS SER 0.409396 0.721311
103 GLU THR VAL ARG PHE GLN SER ASP 0.409396 0.75
104 SER GLN TYR TYR TYR ASN SER LEU 0.409091 0.944444
105 THR PHE GLN ALA PSA LEU ARG GLU 0.408805 0.774194
106 PHE ARG TYR LEU GLY 0.408759 0.8
107 GLU GLU ASN LEU LEU ASP PHE VAL ARG PHE 0.407895 0.754098
108 SER ILE ILE ASN PHE GLU LYS LEU 0.406897 0.807018
109 GLU LEU ASP 1OL VAL GLU PHE 0.406897 0.792453
110 LEU GLU LEU ASP LYS TRP ALA SER LEU 0.406452 0.786885
111 ACE PHE ASP GLU MET GLU GLU CYS 0.40625 0.719298
112 GLY TYR GLU ASN PRO THR TYR LYS PHE PHE 0.406061 0.705882
113 ALA ARG THR GLU LEU TYR ARG SER LEU 0.405405 0.819672
114 SER GLU ILE GLU PHE ALA ARG LEU 0.405405 0.737705
115 ALA PRO ALA TRP LEU PHE GLU ALA 0.403727 0.623188
116 ALA LEU TYR ASN THR ALA ALA ALA LEU 0.402985 0.814815
117 GLU LEU ASP ORN TRP ALA SER 0.402685 0.813559
118 SER SER PHE TYR PRO SEP ALA GLU GLY 0.4 0.666667
119 PHE GLU ALA ASN GLY ASN LEU ILE 0.4 0.754386
120 ALA LEU ASP LEU PHE 0.4 0.711538
Similar Ligands (3D)
Ligand no: 1; Ligand: SER GLU ASP GLU PHE TYR ASP ALA LEU SER; Similar ligands found: 0
No: Ligand Similarity coefficient
Similar Binding Sites (Proteins are less than 50% similar to leader) APoc FAQ
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