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Receptor
PDB id Resolution Class Description Source Keywords
1Z0K 1.92 Å NON-ENZYME: TRANSPORT STRUCTURE OF GTP-BOUND RAB4Q67L GTPASE IN COMPLEX WITH THE CENTRAL RAB BINDING DOMAIN OF RABENOSYN-5 HOMO SAPIENS RAB GTPASES RAB4 RABENOSYN EFFECTOR COMPLEX VESICULAR TRAFFICKING PROTEIN TRANSPORT
Ref.: STRUCTURAL BASIS OF FAMILY-WIDE RAB GTPASE RECOGNITION BY RABENOSYN-5. NATURE V. 436 415 2005
Ligand
Ligand Chain:Residue Validity Ligand Warnings Binding Data NGL Viewer Molecular Weight (Da) Formula SMILES
GTP A:1200;
C:2200;
Valid;
Valid;
none;
none;
submit data
523.18 C10 H16 N5 O14 P3 c1nc2...
MES D:1001;
Invalid;
none;
submit data
195.237 C6 H13 N O4 S C1COC...
MG A:1201;
C:2201;
Part of Protein;
Part of Protein;
none;
none;
submit data
24.305 Mg [Mg+2...
View in 3D viewer
90% Homology Family
Leader
PDB id Resolution Class Description Source Keywords
1Z0K 1.92 Å NON-ENZYME: TRANSPORT STRUCTURE OF GTP-BOUND RAB4Q67L GTPASE IN COMPLEX WITH THE CENTRAL RAB BINDING DOMAIN OF RABENOSYN-5 HOMO SAPIENS RAB GTPASES RAB4 RABENOSYN EFFECTOR COMPLEX VESICULAR TRAFFICKING PROTEIN TRANSPORT
Ref.: STRUCTURAL BASIS OF FAMILY-WIDE RAB GTPASE RECOGNITION BY RABENOSYN-5. NATURE V. 436 415 2005
Members (1)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 209 families.
1 1Z0K - GTP C10 H16 N5 O14 P3 c1nc2c(n1[....
70% Homology Family (1)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 175 families.
1 1Z0K - GTP C10 H16 N5 O14 P3 c1nc2c(n1[....
50% Homology Family (1)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 149 families.
1 1Z0K - GTP C10 H16 N5 O14 P3 c1nc2c(n1[....
Polypharmacology
Similar Ligands
Ligand no: 1; Ligand: GTP; Similar ligands found: 156
No: Ligand ECFP6 Tc MDL keys Tc
1 GTP 1 1
2 GP3 0.921053 0.973684
3 GDP 0.909091 1
4 GSP 0.853659 0.948718
5 GNH 0.82716 0.986667
6 G1R 0.819277 0.986667
7 GAV 0.811765 0.961039
8 9GM 0.809524 0.973684
9 GNP 0.809524 0.973684
10 GCP 0.797619 0.973684
11 5GP 0.797468 0.986486
12 G 0.797468 0.986486
13 GMV 0.764706 0.973684
14 G2R 0.764045 0.961039
15 G5P 0.755319 0.973684
16 GTG 0.752688 0.936709
17 G2P 0.747126 0.961039
18 G3A 0.744681 0.973684
19 GDD 0.741935 0.961039
20 GDC 0.741935 0.961039
21 GKE 0.741935 0.961039
22 0O2 0.736264 0.986486
23 GP2 0.729412 0.961039
24 6CK 0.726316 0.936709
25 Y9Z 0.723404 0.902439
26 GPG 0.717391 0.961039
27 GFB 0.715789 0.961039
28 GDR 0.715789 0.961039
29 GPD 0.704082 0.925
30 GKD 0.693878 0.961039
31 JB2 0.693878 0.961039
32 GDX 0.686869 0.973684
33 ALF 5GP 0.685393 0.888889
34 GH3 0.681319 0.973333
35 YGP 0.677083 0.901235
36 G3D 0.67033 0.986486
37 GDP AF3 0.659574 0.888889
38 ALF GDP 0.659574 0.888889
39 GDP ALF 0.659574 0.888889
40 DGT 0.659341 0.923077
41 GMP 0.658228 0.88
42 G4P 0.655914 0.986486
43 JB3 0.653846 0.948718
44 NGD 0.647619 0.961039
45 CAG 0.642202 0.880952
46 2MD 0.62963 0.891566
47 MGP 0.619565 0.961039
48 U2G 0.616822 0.936709
49 6G0 0.612903 0.961039
50 MGD 0.612613 0.891566
51 TPG 0.608696 0.840909
52 CG2 0.605505 0.936709
53 GDP 7MG 0.601942 0.911392
54 FEG 0.601852 0.879518
55 G G 0.598039 0.948052
56 ZGP 0.59633 0.869048
57 PGD 0.591304 0.925
58 MD1 0.591304 0.891566
59 3GP 0.590909 0.946667
60 GPX 0.581633 0.946667
61 DGI 0.580645 0.923077
62 IDP 0.576087 0.972973
63 DBG 0.567797 0.948718
64 2GP 0.555556 0.96
65 FE9 0.555556 0.776596
66 G4M 0.547619 0.880952
67 BGO 0.544643 0.924051
68 GCP G 0.543689 0.921053
69 ATP 0.537634 0.92
70 HEJ 0.537634 0.92
71 G1G 0.533898 0.925
72 AQP 0.531915 0.92
73 5FA 0.531915 0.92
74 A G 0.525862 0.935065
75 G A A A 0.525862 0.923077
76 U A G G 0.521368 0.935065
77 HFD 0.520833 0.873418
78 R5I 0.520408 0.946667
79 R7I 0.520408 0.946667
80 01G 0.518868 0.902439
81 P2G 0.510638 0.883117
82 ITT 0.510638 0.868421
83 AKW 0.504348 0.890244
84 GGM 0.504274 0.901235
85 G1R G1R 0.504065 0.924051
86 DGP 0.5 0.910256
87 PGD O 0.5 0.850575
88 MGO 0.5 0.864198
89 DG 0.5 0.910256
90 P1G 0.5 0.871795
91 GTA 0.495495 0.936709
92 PRT 0.490741 0.959459
93 B4P 0.489362 0.894737
94 AP5 0.489362 0.894737
95 IMP 0.489362 0.959459
96 G U 0.487179 0.9
97 7DT 0.484536 0.906667
98 GPC 0.479339 0.879518
99 G C 0.478992 0.9
100 BA3 0.478723 0.894737
101 ADP 0.473684 0.92
102 G2Q 0.471698 0.961039
103 6YZ 0.470588 0.896104
104 G7M 0.46875 0.948052
105 C1Z 0.462963 0.986486
106 25L 0.458716 0.907895
107 A2D 0.457447 0.894737
108 RGT 0.45045 0.909091
109 AGS 0.45 0.873418
110 SAP 0.45 0.873418
111 SGP 0.44898 0.82716
112 A4P 0.445378 0.869048
113 G G G RPC 0.442623 0.875
114 ANP 0.441176 0.896104
115 ACQ 0.441176 0.896104
116 8GT 0.441176 0.875
117 APC G U 0.44 0.886076
118 AT4 0.438776 0.884615
119 G U34 0.438017 0.888889
120 6AD 0.436893 0.841463
121 G G G C 0.433071 0.9125
122 UP5 0.432203 0.873418
123 PCG 0.431373 0.933333
124 C2E 0.431373 0.921053
125 35G 0.431373 0.933333
126 A G C C 0.429688 0.911392
127 T99 0.427184 0.884615
128 5GP 5GP 0.427184 0.883117
129 TAT 0.427184 0.884615
130 AR6 0.425743 0.894737
131 APR 0.425743 0.894737
132 7DD 0.424242 0.906667
133 AN2 0.424242 0.907895
134 DG DG 0.423423 0.865854
135 AD9 0.421569 0.896104
136 M33 0.42 0.883117
137 7D4 0.42 0.835443
138 UCG 0.419847 0.911392
139 HDV 0.419048 0.825
140 H6Y 0.419048 0.946667
141 G C C C 0.416667 0.924051
142 ACP 0.415842 0.896104
143 T5A 0.414634 0.802326
144 A1R 0.412844 0.839506
145 ADQ 0.412844 0.871795
146 MGQ 0.412844 0.935897
147 A3R 0.412844 0.839506
148 MGT 0.411215 0.823529
149 A G U 0.410072 0.888889
150 93A 0.41 0.833333
151 A22 0.407407 0.907895
152 CA0 0.405941 0.896104
153 ATF 0.40566 0.884615
154 AGO 0.404762 0.888889
155 MGV 0.401786 0.890244
156 CGP 0.4 0.86747
Similar Binding Sites (Proteins are less than 50% similar to leader)
Pocket No.: 1; Query (leader) PDB : 1Z0K; Ligand: GTP; Similar sites found with APoc: 553
This union binding pocket(no: 1) in the query (biounit: 1z0k.bio1) has 24 residues
No: Leader PDB Ligand Sequence Similarity
1 3PQC GDP None
2 2W58 ADP None
3 1GXU 2HP None
4 4DDY DN6 None
5 3H86 AP5 None
6 3IIJ ADP None
7 2BEK ATP None
8 5ZB0 TYD None
9 5ZB0 ADP None
10 3TMK T5A None
11 3NHB ADP None
12 4GBM A3P None
13 1LOJ URI None
14 4KFU ACP 1.16279
15 1V3S ATP 1.72414
16 1GOJ ADP 1.74419
17 4E03 ADP 1.74419
18 1NJF ADP 1.74419
19 1NJF AGS 1.74419
20 4ZNL BEF ADP 1.74419
21 6B8B ADP 1.74419
22 2ZX2 RAM 1.74419
23 2D2F ADP 2.32558
24 4MKF AP5 2.32558
25 1BO4 COA 2.38095
26 4WOP CTP 2.66667
27 4OHY ANP 2.90698
28 3HU3 AGS 2.90698
29 3BFV ADP 2.90698
30 1O8B ABF 2.90698
31 5MEX PAP 2.90698
32 2QG6 NMN 2.90698
33 5H3A UMP 2.90698
34 4M7V RAR 2.90698
35 2J9L ATP 2.90698
36 3ZFD ANP 3.48837
37 5WC2 ADP 3.48837
38 1FNN ADP 3.48837
39 1ZIN AP5 3.48837
40 3BER AMP 3.48837
41 5BQ5 ADP BEF 4.06977
42 2QEN ADP 4.06977
43 2QZ4 ADP 4.06977
44 1QF9 ALF 4.06977
45 1QF9 C5P 4.06977
46 1QF9 ADP 4.06977
47 1M0S CIT 4.06977
48 3H4S ADP 4.34783
49 5M04 GDP 4.34783
50 3TK1 GDP 4.34783
51 3Q9L ATP 4.34783
52 4FRZ ADP 4.34783
53 1G8S MET 4.34783
54 2OQ5 BEN 4.34783
55 6FMC DUE 4.43038
56 2IMG MLT 4.63576
57 4V03 ADP 4.65116
58 3KJI ADP 4.65116
59 2CHG ANP 4.65116
60 1VHT BA3 4.65116
61 4PU6 ASP 4.65116
62 4A4Z ANP 4.65116
63 1G41 ADP 4.65116
64 1OSS BEN 4.65116
65 3W6G FLC 4.65116
66 1QAN SAH 4.65116
67 1LVG ADP 5.23256
68 2RCN GDP 5.23256
69 3MD0 GDP 5.23256
70 4R43 GDP 5.23256
71 4KBF AMP 5.23256
72 4BQS ADP 5.23256
73 4BQS K2Q 5.23256
74 1ION ADP 5.23256
75 4QOS ADP 5.23256
76 2VVG ADP 5.7971
77 2WHX ADP 5.7971
78 5LB3 ADP 5.7971
79 1DAK DPU 5.7971
80 1DAK ADP 5.7971
81 5VGR GDP 5.7971
82 4Y4V DAL 5.7971
83 6H5E ANP 5.7971
84 3B9Q MLI 5.81395
85 1XMV ADP 5.81395
86 5Y6N ADP 5.81395
87 5EXT ADP 5.81395
88 1T5C ADP 5.81395
89 1NY5 ADP 5.81395
90 3BOS CDP 5.81395
91 4YS0 ADP 5.81395
92 2OG2 MLI 6.39535
93 1G6O ADP 6.39535
94 4P4T GDP 6.39535
95 1XX6 ADP 6.39535
96 4FCW ADP 6.39535
97 4LJ9 ACP 6.39535
98 2BIF ANP 6.39535
99 2BIF SIN 6.39535
100 1IN4 ADP 6.39535
101 4MKG AP5 6.39535
102 4WEI GLC GAL 6.39535
103 1Z83 AP5 6.39535
104 1OFH ADP 6.39535
105 3QKT ANP 6.39535
106 4BFW ZVW 6.39535
107 2QQ0 ANP 6.39535
108 2QQ0 ADP 6.39535
109 2QQ0 TMP 6.39535
110 2QQ0 THM 6.39535
111 3R7F CP 6.39535
112 5IFS ADP 6.97674
113 3FKQ ATP 6.97674
114 1RRC ADP 6.97674
115 2QN6 GDP 7.24638
116 4RD0 GDP 7.24638
117 2C77 GNP 7.24638
118 2C78 GNP 7.24638
119 5W75 GDP 7.24638
120 3LRE ADP 7.24638
121 3B7G ANP 7.24638
122 4IEE AGS 7.24638
123 3TBK ANP 7.24638
124 5W75 SUC 7.24638
125 3VX3 ADP 7.24638
126 6CS8 F9Y 7.24638
127 4PVR ASP 7.24638
128 1UKZ ADP 7.24638
129 1T3D CYS 7.24638
130 3L6C MLI 7.24638
131 2O66 FLC 7.24638
132 2P3V SRT 7.24638
133 4DCT GDP 7.55814
134 5XKT GNP 7.55814
135 3DZD ADP 7.55814
136 1XP8 AGS 7.55814
137 4R2I ANP 7.55814
138 4PJ3 ANP 7.55814
139 2JLR ANP 7.55814
140 4UXH T5A 7.55814
141 3FJG 3PG 7.55814
142 1MKY GDP 8.13953
143 5L3V GDP 8.13953
144 4X8O AP5 8.13953
145 1JJV ATP 8.13953
146 5W7Q GDP 8.69565
147 3EC1 GDP 8.69565
148 2AWN ADP 8.69565
149 2XT3 ADP 8.69565
150 4B47 GDP 8.69565
151 2XTN GTP 8.69565
152 4XGU ADP 8.69565
153 2FAH GDP 8.69565
154 3FB4 AP5 8.69565
155 1P72 ADP 8.69565
156 5I34 GDP 8.69565
157 3QF7 ANP 8.69565
158 3RLF ANP 8.69565
159 5G3Y ADP 8.69565
160 1LK7 DER 8.69565
161 5UIV ADP 8.69565
162 1K4M CIT 8.69565
163 5WRI A3P 8.69565
164 5WRJ A3P 8.69565
165 3K5I AIR 8.69565
166 3COW 52H 8.69565
167 3U6B GDP 8.72093
168 4P3Y GDP 8.72093
169 2BVN GNP 8.72093
170 3U6K GDP 8.72093
171 4PC3 GDP 8.72093
172 1TQ4 GDP 8.72093
173 5I0H ADP BEF 8.72093
174 1D8T GDP 8.72093
175 5JBQ GDP 8.72093
176 4G5G GDP 8.72093
177 3EZ2 ADP 8.72093
178 4IDN GNP 8.72093
179 4QRH 0O2 8.72093
180 6AYU F6P 8.72093
181 6DEF GCP 9.30233
182 4TTQ ATP 9.30233
183 4QM7 GTP 9.35672
184 4OGQ 7PH 9.67742
185 1U0J ADP 9.88372
186 5HR5 ADP 9.88372
187 2YOH WMJ 9.88372
188 2Z5F A3P 9.88372
189 1F2U ATP 10.1351
190 4LPS GDP 10.1449
191 5GVR LMR 10.1449
192 4PX9 ADP 10.1449
193 3DC4 ADP 10.1449
194 1Q19 SSC 10.1449
195 1Y63 ADP 10.1449
196 1AKY AP5 10.1449
197 3VM7 GLC 10.1449
198 2OZE AGS 10.1449
199 3RC3 ANP 10.1449
200 2X7I CIT 10.1449
201 2J5V PCA 10.1449
202 1QHG ATP 10.1449
203 3P4X ADP 10.1449
204 4NE2 SH2 10.1449
205 4NE2 ADP 10.1449
206 1W4R TTP 10.1449
207 1NST A3P 10.1449
208 2I4I AMP 10.1449
209 1FQJ ALF 10.4651
210 5KSP GDP 10.4651
211 1FQK ALF 10.4651
212 1FQJ GDP 10.4651
213 3E70 GDP 10.4651
214 1FQK GDP 10.4651
215 1GOT GDP 10.4651
216 5KSZ GCP 10.4651
217 2RGX AP5 10.4651
218 1DCP HBI 10.5769
219 2ZTS ADP 10.757
220 1DAR GDP 11.0465
221 2HF9 GSP 11.0465
222 2CBZ ATP 11.0465
223 3MWL 8OX 11.0465
224 4ZKD GDP 11.5942
225 2PZE ATP 11.5942
226 5U32 GDP 11.5942
227 4AG5 ADP 11.5942
228 4YDS ATP 11.5942
229 4H1V GNP 11.5942
230 4WZA ACP 11.5942
231 4WZA ADP 11.5942
232 1R0X ATP 11.5942
233 1FP6 ADP 11.5942
234 3DKP ADP 11.5942
235 5XDR ADP 11.5942
236 1QF5 RPL 11.5942
237 1QF5 GDP 11.5942
238 4D81 ADP 11.5942
239 2IYL GDP 11.5942
240 4Q1A UDP 11.5942
241 4Q1A 2XZ 11.5942
242 3IUY AMP 11.5942
243 5VHC BEF ADP 11.5942
244 4GOX A3P 11.5942
245 1K6M AGS 11.5942
246 2O0J ADP 11.5942
247 6FAA ADP 11.5942
248 1ZUI SKM 11.5942
249 4WZ6 ATP 11.5942
250 6FC1 MGP 11.5942
251 4QAG F95 11.5942
252 5H68 AGS 11.5942
253 1TLC DGP 11.5942
254 5FTB ANP 11.6279
255 5FHD ADP ALF 11.6279
256 4O48 ASP 11.6279
257 1YTM ATP 11.6279
258 5H4S RAM 11.6279
259 4OI4 ATP 12.1739
260 2FNA ADP 12.2093
261 6AIC AMP 12.2093
262 2ORV 4TA 12.7907
263 1YRB GDP 13.0435
264 2GJ8 ALF GDP 13.0435
265 1HTW ADP 13.0435
266 6C90 ADP 13.0435
267 2Q2Y ADP 13.0435
268 2Q2Y MKR 13.0435
269 1IHU AF3 13.0435
270 3ZS9 ADP ALF 13.0435
271 4XVU ATP 13.0435
272 4XTR ATP 13.0435
273 1IHU ADP 13.0435
274 2WOJ ADP ALF 13.0435
275 5AK0 8V1 13.0435
276 1E2K TMC 13.0435
277 4XTR ADP 13.0435
278 1P9B GDP 13.0435
279 1S3G AP5 13.0435
280 5G41 AP5 13.0435
281 1KO8 6PG 13.0435
282 5MVR ADP 13.0435
283 5M7P ADP 13.0435
284 3FVQ ATP 13.0435
285 3ITJ CIT 13.0435
286 2PL3 ADP 13.0435
287 5NM7 GLY 13.0435
288 1NHX FTB 13.0435
289 1NHX PEP 13.0435
290 2GMV UN8 13.0435
291 4JLS 3ZE 13.0435
292 3BFX A3P 13.0435
293 1M7G AV2 13.3721
294 4ZG4 VO4 ADP 13.3721
295 4HSE ADP 13.3721
296 1M7G ADP 13.3721
297 2GKS ADP 13.3721
298 1M7G ADX 13.3721
299 5KUT GDP 13.9535
300 4RZ3 ADP 13.9535
301 3WY9 GDP 14.4928
302 1SKQ GDP 14.4928
303 5H7K GDP 14.4928
304 5H7J GCP 14.4928
305 3WYA GDP 14.4928
306 1LVK MNT BEF 14.4928
307 1SQ5 ADP 14.4928
308 1XKV ATP 14.4928
309 5MZN ADP 14.4928
310 4YJ1 ADP 14.4928
311 5IRN ADP 14.4928
312 5K5Z ANP 14.4928
313 4ZDJ UTP 14.4928
314 1OS1 PYR 14.4928
315 2IS6 ADP 14.4928
316 1OS1 ATP 14.4928
317 3FYH ADP 14.4928
318 1CR1 TTP 14.4928
319 5E5U MLI 14.4928
320 2VOH CIT 14.4928
321 2GDJ ANP 14.4928
322 5BSH PRO 14.4928
323 1IXI 2HP 14.4928
324 5TIV A3P 14.4928
325 1Q20 A3P 14.4928
326 1Q20 PLO 14.4928
327 5BN3 ADP 14.5349
328 3EWA ANP 14.5349
329 1APZ ASP 14.5349
330 2Y65 ADP 15.1163
331 4CVN ADP 15.3285
332 5CK5 GDP 15.942
333 5W76 GDP 15.942
334 5TSH ADP 15.942
335 5GOE GDP 15.942
336 1YQT ADP 15.942
337 5TSH ANP 15.942
338 5YV5 ADP 15.942
339 2DPY ADP 15.942
340 3UIE ANP 15.942
341 1G3Q ADP 15.942
342 1AQU A3P 15.942
343 1I0B PEL 15.942
344 6G14 G4P 16.2791
345 1PUJ GNP 16.8605
346 4PPF FLC 17.3913
347 1KK8 BEF ADP 17.3913
348 1B7T ADP 17.3913
349 1IWE IMP 17.3913
350 5J1J ANP 17.3913
351 5H67 ATP 17.3913
352 1P4V GLY 17.3913
353 1W5T ANP 17.3913
354 1SVM ATP 17.3913
355 1W5T ADP 17.3913
356 3IO3 ADP 18.0233
357 3VMF GTP 18.8406
358 1WDT GTP 18.8406
359 2XTZ GSP 18.8406
360 5IRR GSP 18.8406
361 1V8K ANP 18.8406
362 4LYA ATP 18.8406
363 4HI0 GDP 18.8406
364 4JLV ADP 18.8406
365 2B8W ALF 5GP 18.8406
366 2ZR9 DTP 18.8406
367 2VB6 ADP BEF 18.8406
368 1F5N GNP 18.8406
369 4PFO ADP 18.8406
370 3AB4 THR 18.8406
371 3LL4 2FP 18.8406
372 2HCJ GDP 18.9189
373 3CNL GNP 19.7674
374 5L3W GDP 19.7674
375 2X77 GDP 20.1058
376 3WXM GTP 20.2899
377 2KIN ADP 20.2899
378 1BG2 ADP 20.2899
379 1RJ9 GCP 20.2899
380 2CE7 ADP 20.2899
381 2OBM ADP 20.2899
382 3DEF GDP 20.2899
383 5L3R GCP 20.2899
384 2FSH ANP 20.2899
385 2ZPA ADP 20.2899
386 4NU0 AP5 20.2899
387 1NN5 2DT 20.2899
388 1NN5 ANP 20.2899
389 5HCN GCP 20.3488
390 5L3S GNP 20.3488
391 1UJ2 ADP 20.3488
392 1UJ2 C5P 20.3488
393 5L3S G 20.3488
394 6B4K ANP 20.9302
395 1UPT GTP 21.0526
396 1G7S GDP 21.5116
397 1H65 GDP 21.7391
398 2D7D ADP 21.7391
399 5N69 ADP 21.7391
400 1F9V ADP 21.7391
401 2NCD ADP 21.7391
402 2ODE ALF GDP 22.093
403 3T34 GDP 22.093
404 1QHH ATP 22.6744
405 6A20 ADP 23.1884
406 5ZBR ANP 23.1884
407 5ZXD ATP 23.1884
408 3FWY ADP 23.1884
409 1R6B ADP 23.1884
410 4KVA GTP 24.6377
411 1Z6T ADP 24.6377
412 5Z69 AGS 24.6377
413 4J0Q GDP 25
414 1KK1 GNP 25
415 1CS4 GSP 25
416 1TAD GDP 25
417 1TAD ALF 25
418 2ZJ5 ADP 25
419 1VKJ A3P 25
420 3A4M ADP 25.5814
421 4IHQ ADP 26.087
422 1WF3 GNP 26.1628
423 2GK6 ADP 27.5362
424 3KTA AP5 27.5362
425 2IXE ATP 27.5362
426 1XEX ATP 27.5362
427 3QVV A3P 27.5362
428 5J1S ATP 27.6423
429 2QTV GNP 28.1437
430 1W7J ADP BEF 28.9855
431 4IOK XPO 28.9855
432 4IOK ADP 28.9855
433 4TL6 ANP 28.9855
434 2F5X ASP 28.9855
435 4TMZ GSP 29.0698
436 1D2E GDP 29.6512
437 5FG3 GDP 30.2326
438 3QXC ATP 30.4348
439 3CX8 GSP 30.814
440 3AB3 GDP 30.814
441 3AQ4 GDP 30.814
442 1ZCB GDP 30.814
443 2A5F GTP 31.3953
444 2CDN ADP 31.8841
445 3PCR GTP 32.0988
446 4KAX GTP 32.5444
447 4NCN GTP 32.5581
448 2J59 GTP 33.1325
449 1BH2 GSP 33.1395
450 1SVK ALF GDP 33.1395
451 1Y3A GDP 33.1395
452 6CRK GDP 33.1395
453 2OM2 GDP 33.1395
454 1GP2 GDP 33.1395
455 5KDO GDP 33.1395
456 2W83 GTP 33.3333
457 4LC1 GDP 33.3333
458 3N5C GDP 33.3333
459 5LTJ BEF 33.3333
460 1OYY AGS 33.3333
461 5LTJ ADP 33.3333
462 2XAU ADP 33.3333
463 5DI3 GNP 33.7209
464 4M9Q GNP 33.7209
465 5YT0 GDP 34.3023
466 2C9O ADP 34.7826
467 4BAS GNP 34.8837
468 6AU6 GDP 35.4651
469 4YLG GDP 36.0465
470 2ZEJ GDP 36.0465
471 2FH5 GTP 36.6279
472 4U5X GNP 36.6279
473 1G7C 5GP 37.6812
474 1W0J ADP 37.6812
475 2CK3 ANP 37.6812
476 1W0J ADP BEF 37.6812
477 2V7Q ATP 37.6812
478 2CK3 ADP 37.6812
479 2V7Q ADP 37.6812
480 3T12 GDP ALF 37.7907
481 3T1O GDP 37.7907
482 3ZQ6 ADP ALF 39.1304
483 5EE5 GTP 39.1813
484 4ZI2 GNP 39.5349
485 4GOJ GNP 39.5349
486 1FZQ GDP 39.779
487 1MR3 G3D 40.1163
488 2OFW ADX 40.5797
489 1X6V ADP 40.5797
490 3REF GDP 40.6977
491 1KSH GDP 41.2791
492 4V0K GDP 41.4201
493 3DOE GTP 41.8605
494 4YC7 GNP 43.0233
495 1SVI GDP 43.0233
496 3Q85 GNP 43.1953
497 2PEZ DAT 43.4783
498 2PEZ GGZ 43.4783
499 1A4R GNH 43.6047
500 1A4R GDP 43.6047
501 5UPK GNP 43.6047
502 1GRN GDP 43.6047
503 2WMO GTP 43.6047
504 4ITR GDP 43.6047
505 1GRN AF3 43.6047
506 2NGR GDP 43.6047
507 4DID GDP 43.6047
508 2NGR AF3 43.6047
509 1NF3 GNP 44.186
510 1M7B GTP 44.7674
511 1GWN GTP 44.7674
512 2HT6 GDP 45.3488
513 5IRC GDP 45.3488
514 2CJW GDP 45.3488
515 6BSX GDP 45.5056
516 6BSX E7S 45.5056
517 3Q72 GNP 45.7831
518 4XSH GSP 45.9302
519 5JCP GDP ALF 45.9302
520 1TX4 ALF GDP 45.9302
521 5HPY GDP 45.9302
522 1HE1 GDP 45.9302
523 1OW3 GDP 45.9302
524 1HE1 AF3 45.9302
525 1RYH GNP 45.9302
526 3ZIA ADP 46.0317
527 3ZIA ATP 46.0317
528 1X1R GDP 46.0674
529 1I4D GDP 46.5116
530 2J0V GDP 46.5116
531 6BCB GSP 46.5116
532 6BCA GSP 46.5116
533 4D0N GDP 46.5116
534 1KMQ GNP 46.5116
535 1CXZ GSP 46.5116
536 4XOI GTP 46.5116
537 3LXR GDP 46.5116
538 2W2X GSP 46.5116
539 3SBD GNP 46.5116
540 6BC0 GSP 46.5116
541 1DS6 GDP 46.5116
542 1MH1 GNP 47.093
543 1E96 GTP 47.093
544 2FJU GSP 47.093
545 5UQW GDP 47.093
546 3T5G GDP 47.093
547 1G4U GDP 47.093
548 1G4U AF3 47.093
549 2GCO GNP 47.6744
550 2GCN GDP 47.6744
551 5TB5 GDP 48.1081
552 5TAR GDP 48.1081
553 2WKQ GTP 48.2558
554 3E5H GNP 50
Pocket No.: 2; Query (leader) PDB : 1Z0K; Ligand: GTP; Similar sites found with APoc: 23
This union binding pocket(no: 2) in the query (biounit: 1z0k.bio2) has 24 residues
No: Leader PDB Ligand Sequence Similarity
1 1LOJ U None
2 5MEX SZZ 2.90698
3 5WQP NCA 4.34783
4 2ZFZ ARG 5.06329
5 2J73 GLC GLC GLC 6.79612
6 3KC1 2T6 7.55814
7 5AOG IAC 8.69565
8 1SQL GUN 8.69565
9 1IK4 PGH 8.69565
10 5TQZ GLC 8.69565
11 1VMK GUN 9.30233
12 1C0I BE2 10.1449
13 1C0I FAD 10.1449
14 1NU4 MLA 11.3402
15 1HFE CYS 11.3821
16 4LHD GLY 11.5942
17 5DRB 5FJ 11.5942
18 5C9P FUC 12.2093
19 3TD3 GLY 15.4472
20 5DT6 GLU 15.942
21 3CV2 OXL 15.942
22 4TQK NAG 20.2899
23 3QDK QDK 20.2899
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