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Receptor
PDB id Resolution Class Description Source Keywords
1Z0A 2.12 Å NON-ENZYME: TRANSPORT GDP-BOUND RAB2A GTPASE HOMO SAPIENS RAB GTPASE RAB2 VESICULAR TRAFFICKING PROTEIN TRANSPORT
Ref.: STRUCTURAL BASIS OF FAMILY-WIDE RAB GTPASE RECOGNITION BY RABENOSYN-5. NATURE V. 436 415 2005
Ligand
Ligand Chain:Residue Validity Ligand Warnings Binding Data NGL Viewer Molecular Weight (Da) Formula SMILES
GDP A:1200;
B:2200;
C:3200;
D:4200;
Valid;
Valid;
Valid;
Valid;
none;
none;
none;
none;
submit data
443.201 C10 H15 N5 O11 P2 c1nc2...
MG A:1201;
B:2201;
C:3201;
D:4201;
Part of Protein;
Part of Protein;
Part of Protein;
Part of Protein;
none;
none;
none;
none;
submit data
24.305 Mg [Mg+2...
View in 3D viewer
90% Homology Family
Leader
PDB id Resolution Class Description Source Keywords
1Z0A 2.12 Å NON-ENZYME: TRANSPORT GDP-BOUND RAB2A GTPASE HOMO SAPIENS RAB GTPASE RAB2 VESICULAR TRAFFICKING PROTEIN TRANSPORT
Ref.: STRUCTURAL BASIS OF FAMILY-WIDE RAB GTPASE RECOGNITION BY RABENOSYN-5. NATURE V. 436 415 2005
Members (1)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 209 families.
1 1Z0A - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
70% Homology Family (6)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 10 families.
1 2A5J - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
2 1YU9 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
3 2BME - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
4 2BMD - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
5 1Z0F - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
6 1Z0A - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
50% Homology Family (274)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 149 families.
1 1Z2A - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
2 1Z22 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
3 1YZT - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
4 1YZU - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
5 1Z08 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
6 1Z0I - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
7 4DKX - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
8 2Y8E - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
9 2A5J - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
10 4LHW - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
11 4LHV - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
12 2P2L - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
13 2W2V - GTP C10 H16 N5 O14 P3 c1nc2c(n1[....
14 1MH1 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
15 2WKP - FMN C17 H21 N4 O9 P Cc1cc2c(cc....
16 2WKR - FMN C17 H21 N4 O9 P Cc1cc2c(cc....
17 2WKQ - FMN C17 H21 N4 O9 P Cc1cc2c(cc....
18 5WDO - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
19 3TGP - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
20 1P2T - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
21 4Q01 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
22 4M21 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
23 6ARK - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
24 821P - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
25 1Q21 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
26 5VPZ - GSP C10 H16 N5 O13 P3 S c1nc2c(n1[....
27 6F76 - CVK C24 H26 N2 O3 CN(C)Cc1cc....
28 6Q21 - GCP C11 H18 N5 O13 P3 c1nc2c(n1[....
29 4L9W - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
30 4WA7 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
31 3V4F - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
32 3K9N - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
33 5OCO - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
34 4M1T - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
35 4XVQ - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
36 5V71 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
37 5VP7 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
38 2QUZ - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
39 1CLU Kd = 5.4 nM DBG C23 H27 N8 O13 P3 c1ccc(cc1)....
40 4L8G - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
41 5VBM - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
42 2RGD - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
43 4PZY - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
44 4LPK - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
45 4DLV - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
46 4LRW - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
47 2CLD - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
48 4M1W - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
49 3L8Z - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
50 3LBH - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
51 721P - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
52 1LF5 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
53 1GNR - CAG C18 H23 N6 O16 P3 C[C@H](c1c....
54 4LUC - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
55 2RGE - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
56 4DLS - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
57 4M22 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
58 4DLY - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
59 1ZW6 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
60 2RGC - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
61 5VQ1 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
62 5V9L - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
63 2CL0 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
64 4TQA - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
65 3RRZ - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
66 5VPY - 9GM C10 H17 N6 O13 P3 c1nc2c(n1[....
67 2EVW - XY2 C12 H15 N5 O4 CC(=O)N(C)....
68 2RGB - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
69 4LDJ - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
70 1XJ0 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
71 1ZVQ - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
72 5VQ6 - GSP C10 H16 N5 O13 P3 S c1nc2c(n1[....
73 1P2S - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
74 5V6V - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
75 621P - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
76 1P2V - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
77 2CL7 - GTP C10 H16 N5 O14 P3 c1nc2c(n1[....
78 3OIW - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
79 4LV6 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
80 4DLT - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
81 1P2U - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
82 5V6S - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
83 5UK9 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
84 6ASE - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
85 3RS0 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
86 5B30 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
87 5B2Z - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
88 3KKN - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
89 4M1O - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
90 5VQ0 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
91 4M1Y - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
92 5VPI - GTP C10 H16 N5 O14 P3 c1nc2c(n1[....
93 5W22 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
94 3I3S - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
95 4OBE - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
96 3RRY - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
97 1QRA - GTP C10 H16 N5 O14 P3 c1nc2c(n1[....
98 6BP1 - GCP C11 H18 N5 O13 P3 c1nc2c(n1[....
99 4LYJ - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
100 121P - GCP C11 H18 N5 O13 P3 c1nc2c(n1[....
101 1RVD - DBG C23 H27 N8 O13 P3 c1ccc(cc1)....
102 5VBZ - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
103 2RGA - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
104 3RS7 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
105 5UHV - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
106 2CLC - GTP C10 H16 N5 O14 P3 c1nc2c(n1[....
107 4EPT - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
108 4EPY Kd = 340 uM 0QY C21 H21 N5 O c1ccc2c(c1....
109 4DLZ - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
110 1AGP - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
111 1GNQ - CAG C18 H23 N6 O16 P3 C[C@H](c1c....
112 2Q21 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
113 3RS2 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
114 5VQ8 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
115 4L9S - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
116 6B0Y - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
117 4M1S - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
118 4EPV - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
119 5WDP - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
120 4TQ9 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
121 3K8Y - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
122 3OIV - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
123 5OCT - 9R5 C9 H10 Cl N O2 c1cc2c(cc1....
124 5VBE - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
125 4Q02 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
126 3LBI - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
127 3RSL - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
128 1LF0 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
129 1XCM - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
130 421P - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
131 4DLR - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
132 2CE2 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
133 4QL3 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
134 4Q21 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
135 4DLU - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
136 1CTQ - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
137 3OIU - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
138 6B0V - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
139 3RS5 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
140 4EPW - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
141 5WDQ - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
142 1IOZ - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
143 221P - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
144 4LYH - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
145 4DLX - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
146 4Q03 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
147 4PZZ - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
148 3KKM - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
149 1JAI - GCP C11 H18 N5 O13 P3 c1nc2c(n1[....
150 3L8Y - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
151 3RS4 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
152 3LBN - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
153 4NMM - Y9Z C14 H22 N6 O12 P2 CC(=O)NCCO....
154 5VQ2 - GTP C10 H16 N5 O14 P3 c1nc2c(n1[....
155 3RSO - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
156 4XVR - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
157 5P21 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
158 5F2E - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
159 4EPX - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
160 4EPR - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
161 4DLW - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
162 5WHD - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
163 5V9O - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
164 5V9U - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
165 2RGG - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
166 4LYF - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
167 1JAH - GCP C11 H18 N5 O13 P3 c1nc2c(n1[....
168 1YU9 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
169 2BME - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
170 2BMD - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
171 1YZN - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
172 3RWM - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
173 3RWO - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
174 3REG - GSP C10 H16 N5 O13 P3 S c1nc2c(n1[....
175 2F9L - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
176 2F9M - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
177 1YZK - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
178 1OIV - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
179 2FE4 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
180 2FFQ - GSP C10 H16 N5 O13 P3 S c1nc2c(n1[....
181 2E9S - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
182 5US4 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
183 5UQW - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
184 5USJ - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
185 3NKV - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
186 1HUQ - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
187 1Z07 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
188 1N6R - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
189 1Z0D - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
190 1N6H - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
191 1N6P - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
192 1N6K - GDP AF3 n/a n/a
193 1N6N - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
194 1N6I - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
195 1R2Q - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
196 1N6L - GTP C10 H16 N5 O14 P3 c1nc2c(n1[....
197 1N6O - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
198 1TU4 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
199 1EK0 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
200 1S8F - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
201 1YZL - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
202 1WMS - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
203 1D5C - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
204 1Z0F - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
205 3E5H - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
206 4DSU - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
207 4DST - GCP C11 H18 N5 O13 P3 c1nc2c(n1[....
208 4DSO - GSP C10 H16 N5 O13 P3 S c1nc2c(n1[....
209 4DSN - GCP C11 H18 N5 O13 P3 c1nc2c(n1[....
210 5OCG - 9R5 C9 H10 Cl N O2 c1cc2c(cc1....
211 1KAO - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
212 3RAP - GTP C10 H16 N5 O14 P3 c1nc2c(n1[....
213 1YZQ - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
214 2GIL - GTP C10 H16 N5 O14 P3 c1nc2c(n1[....
215 1Z0A - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
216 1KY2 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
217 1KY3 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
218 2HT6 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
219 3KKO - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
220 3KKQ - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
221 3KKP - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
222 1X1R - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
223 1X1S - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
224 1T91 - GTP C10 H16 N5 O14 P3 c1nc2c(n1[....
225 1VG8 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
226 2GCP - GSP C10 H16 N5 O13 P3 S c1nc2c(n1[....
227 2GCN - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
228 3X1Z - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
229 3X1Y - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
230 3X1W - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
231 3X1X - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
232 4Z8Y - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
233 1G17 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
234 1G16 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
235 1M7B - GTP C10 H16 N5 O14 P3 c1nc2c(n1[....
236 2DPX - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
237 3Q7Q - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
238 3Q7P - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
239 3Q72 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
240 1U8Z - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
241 1U90 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
242 1U8Y - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
243 1YVD - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
244 5WDR - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
245 5WDS - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
246 1Z06 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
247 3TH5 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
248 3SBD - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
249 1OIX - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
250 1OIW - GSP C10 H16 N5 O13 P3 S c1nc2c(n1[....
251 2QRZ - GCP C11 H18 N5 O13 P3 c1nc2c(n1[....
252 1A4R Kd = 9.4 pM GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
253 1KMQ - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
254 1DPF - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
255 1FTN - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
256 5A0F - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
257 1A2B - GSP C10 H16 N5 O13 P3 S c1nc2c(n1[....
258 4U5X - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
259 3Q85 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
260 1RYH - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
261 1RYF - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
262 1VG1 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
263 5XC5 - GTP C10 H16 N5 O14 P3 c1nc2c(n1[....
264 5XC3 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
265 3RAB - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
266 1GWN - GTP C10 H16 N5 O14 P3 c1nc2c(n1[....
267 2EW1 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
268 4O25 - GTP C10 H16 N5 O14 P3 c1nc2c(n1[....
269 4O2R - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
270 4O2L - GTP C10 H16 N5 O14 P3 c1nc2c(n1[....
271 6BSX - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
272 5YXH - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
273 1XTQ - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
274 3SEA - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
Polypharmacology
Similar Ligands
Ligand no: 1; Ligand: GDP; Similar ligands found: 161
No: Ligand ECFP6 Tc MDL keys Tc
1 GDP 1 1
2 GTP 0.909091 1
3 GP3 0.881579 0.973684
4 GNH 0.858974 0.986667
5 9GM 0.839506 0.973684
6 GNP 0.839506 0.973684
7 G 0.828947 0.986486
8 5GP 0.828947 0.986486
9 G1R 0.82716 0.986667
10 GCP 0.82716 0.973684
11 GSP 0.817073 0.948718
12 GAV 0.797619 0.961039
13 GMV 0.792683 0.973684
14 G2P 0.77381 0.961039
15 G2R 0.770115 0.961039
16 GP2 0.756098 0.961039
17 GDC 0.747253 0.961039
18 GKE 0.747253 0.961039
19 GDD 0.747253 0.961039
20 GPG 0.741573 0.961039
21 G3D 0.732558 0.986486
22 ALF 5GP 0.729412 0.888889
23 Y9Z 0.728261 0.902439
24 G5P 0.723404 0.973684
25 GFB 0.72043 0.961039
26 GTG 0.72043 0.936709
27 GDR 0.72043 0.961039
28 G4P 0.715909 0.986486
29 G3A 0.712766 0.973684
30 6CK 0.712766 0.936709
31 GDP AF3 0.7 0.888889
32 ALF GDP 0.7 0.888889
33 GDP ALF 0.7 0.888889
34 YGP 0.698925 0.901235
35 GKD 0.697917 0.961039
36 JB2 0.697917 0.961039
37 GDX 0.690722 0.973684
38 GPD 0.690722 0.925
39 GMP 0.684211 0.88
40 0O2 0.666667 0.986486
41 JB3 0.656863 0.948718
42 NGD 0.650485 0.961039
43 DGI 0.636364 0.923077
44 GDP 7MG 0.636364 0.911392
45 U2G 0.634615 0.936709
46 GPX 0.634409 0.946667
47 G G 0.632653 0.948052
48 IDP 0.632184 0.972973
49 2MD 0.632075 0.891566
50 CAG 0.62963 0.880952
51 CG2 0.622642 0.936709
52 FEG 0.619048 0.879518
53 MGD 0.614679 0.891566
54 ZGP 0.613208 0.869048
55 GH3 0.612903 0.973333
56 3GP 0.611765 0.946667
57 MD1 0.607143 0.891566
58 PGD 0.59292 0.925
59 DGT 0.591398 0.923077
60 BGO 0.588785 0.924051
61 TPG 0.582609 0.840909
62 DBG 0.582609 0.948718
63 2GP 0.574713 0.96
64 FE9 0.570175 0.776596
65 GCP G 0.56 0.921053
66 A G 0.553571 0.935065
67 G A A A 0.553571 0.923077
68 MGP 0.553191 0.961039
69 U A G G 0.548673 0.935065
70 G4M 0.548387 0.880952
71 6G0 0.547368 0.961039
72 G1R G1R 0.542373 0.924051
73 P2G 0.527473 0.883117
74 PGD O 0.525 0.850575
75 ADP 0.522222 0.92
76 R5I 0.520833 0.946667
77 R7I 0.520833 0.946667
78 GGM 0.517544 0.901235
79 DGP 0.516484 0.910256
80 DG 0.516484 0.910256
81 P1G 0.516129 0.871795
82 G U 0.513274 0.9
83 G1G 0.508475 0.925
84 IMP 0.505495 0.959459
85 AKW 0.504425 0.890244
86 G C 0.504348 0.9
87 GPC 0.491525 0.879518
88 G7M 0.483871 0.948052
89 6AD 0.479592 0.841463
90 ATP 0.473684 0.92
91 HEJ 0.473684 0.92
92 G2Q 0.471154 0.961039
93 5FA 0.46875 0.92
94 AQP 0.46875 0.92
95 GTA 0.468468 0.936709
96 7DD 0.468085 0.906667
97 G G G RPC 0.466102 0.875
98 SGP 0.463158 0.82716
99 01G 0.462963 0.902439
100 HFD 0.459184 0.873418
101 B4P 0.457447 0.894737
102 AP5 0.457447 0.894737
103 A2D 0.456522 0.894737
104 6YZ 0.455446 0.896104
105 G G G C 0.455285 0.9125
106 5GP 5GP 0.454545 0.883117
107 ANP 0.454545 0.896104
108 ACQ 0.454545 0.896104
109 AT4 0.452632 0.884615
110 A G C C 0.451613 0.911392
111 APC G U 0.45082 0.886076
112 PRT 0.449541 0.959459
113 G U34 0.449153 0.888889
114 DG DG 0.448598 0.865854
115 ITT 0.447917 0.868421
116 BA3 0.446809 0.894737
117 C2E 0.444444 0.921053
118 PCG 0.444444 0.933333
119 35G 0.444444 0.933333
120 MGO 0.441176 0.864198
121 AN2 0.4375 0.907895
122 G C C C 0.4375 0.924051
123 M33 0.43299 0.883117
124 UCG 0.429688 0.911392
125 A G U 0.42963 0.888889
126 ACP 0.428571 0.896104
127 MGQ 0.424528 0.935897
128 AR6 0.424242 0.894737
129 7DT 0.424242 0.906667
130 APR 0.424242 0.894737
131 93A 0.42268 0.833333
132 A4P 0.420168 0.869048
133 G8D 0.42 0.875
134 AD9 0.42 0.896104
135 SAP 0.42 0.873418
136 AGS 0.42 0.873418
137 CA0 0.418367 0.896104
138 ATF 0.417476 0.884615
139 AGO 0.414634 0.888889
140 A G U U 0.414286 0.888889
141 NIA 0.413043 0.82716
142 MGV 0.412844 0.890244
143 TAT 0.411765 0.884615
144 T99 0.411765 0.884615
145 ADQ 0.411215 0.871795
146 A1R 0.411215 0.839506
147 RGT 0.410714 0.909091
148 CGP 0.409836 0.86747
149 C1Z 0.409091 0.986486
150 A 0.408602 0.893333
151 AMP 0.408602 0.893333
152 UP5 0.40678 0.873418
153 AMZ 0.406593 0.918919
154 C2R 0.406593 0.906667
155 JBT 0.405882 0.778947
156 A22 0.40566 0.907895
157 25L 0.405405 0.907895
158 ADX 0.40404 0.809524
159 8OD 0.401961 0.946667
160 50T 0.4 0.883117
161 4TC 0.4 0.851852
Similar Binding Sites (Proteins are less than 50% similar to leader)
Pocket No.: 1; Query (leader) PDB : 1Z0A; Ligand: GDP; Similar sites found with APoc: 522
This union binding pocket(no: 1) in the query (biounit: 1z0a.bio1) has 18 residues
No: Leader PDB Ligand Sequence Similarity
1 3WY9 GDP None
2 3WYA GDP None
3 2GJ8 ALF GDP None
4 3TK1 GDP None
5 1SVI GDP None
6 2PEZ GGZ None
7 2PEZ DAT None
8 3DZD ADP None
9 4E03 ADP None
10 5G3Y ADP None
11 1E2K TMC None
12 2CHG ANP None
13 1ZIN AP5 None
14 4MKG AP5 None
15 4MKF AP5 None
16 1W5T ANP None
17 1W5T ADP None
18 5ZB0 TYD None
19 5ZB0 ADP None
20 4QAG F95 None
21 2IL4 COA None
22 1X8J A3P 0.574713
23 3T1O GDP 1.14943
24 1Y63 ADP 1.14943
25 2O66 FLC 1.48148
26 4Q1A UDP 1.72414
27 4Q1A 2XZ 1.72414
28 1FP6 ADP 1.72414
29 1IN4 ADP 1.72414
30 4GOX A3P 1.72414
31 1G6O ADP 1.72414
32 4AG5 ADP 1.72414
33 1U1I NAD 1.72414
34 2XTZ GSP 2.29885
35 1H65 GDP 2.29885
36 5BQ5 ADP BEF 2.29885
37 5GVR LMR 2.29885
38 3BOS CDP 2.29885
39 1Q19 SSC 2.29885
40 2O0J ADP 2.29885
41 5XKT GNP 2.5
42 5GOE GDP 2.87356
43 4LC1 GDP 2.87356
44 3PQC GDP 2.87356
45 2HF9 GSP 2.87356
46 3FKQ ATP 2.87356
47 3ZFD ANP 2.87356
48 1ION ADP 2.87356
49 5I34 GDP 2.87356
50 1SVM ATP 2.87356
51 3VM7 GLC 2.87356
52 6AIC AMP 2.87356
53 5BYK OAQ 3.0888
54 5BYK A3P 3.0888
55 6FMC DUE 3.16456
56 2C78 GNP 3.44828
57 5W7Q GDP 3.44828
58 2C77 GNP 3.44828
59 2OG2 MLI 3.44828
60 1V8K ANP 3.44828
61 3VX3 ADP 3.44828
62 1YTM ATP 3.44828
63 1P72 ADP 3.44828
64 3FYH ADP 3.44828
65 2GKS ADP 3.44828
66 3EWA ANP 3.44828
67 1S3G AP5 3.44828
68 4IOK XPO 3.44828
69 4IOK ADP 3.44828
70 5Y6N ADP 3.44828
71 2GDJ ANP 3.44828
72 2BIF SIN 3.44828
73 2BIF ANP 3.44828
74 1QF9 C5P 3.44828
75 1QF9 ADP 3.44828
76 1QF9 ALF 3.44828
77 2ZE7 DST 3.44828
78 1Q20 A3P 3.44828
79 1Q20 PLO 3.44828
80 4YJ1 ADP 3.44828
81 2ZE7 AMP 3.44828
82 2D24 XYS XYS 3.44828
83 5E5U MLI 3.44828
84 4IXH IMP 3.44828
85 2XZ9 PYR 3.44828
86 3AB4 THR 3.44828
87 3B9Q MLI 3.44828
88 3IQE F42 3.44828
89 5U32 GDP 4.02299
90 1G7C 5GP 4.02299
91 3FWY ADP 4.02299
92 2OFW ADX 4.02299
93 1G3Q ADP 4.02299
94 2IYL GDP 4.02299
95 1SQ5 ADP 4.02299
96 3QXC ATP 4.02299
97 1X6V ADP 4.02299
98 3BFV ADP 4.02299
99 5I0H ADP BEF 4.02299
100 5K5Z ANP 4.02299
101 1CR1 TTP 4.02299
102 2OZE AGS 4.02299
103 1RRC ADP 4.02299
104 2AWN ADP 4.02299
105 4ZNL BEF ADP 4.02299
106 4YS0 ADP 4.02299
107 5WRI A3P 4.02299
108 2JAQ DCP 4.02299
109 5TIV A3P 4.02299
110 3BER AMP 4.02299
111 3NJQ NJQ 4.02299
112 3NDJ SAH 4.02299
113 3NDJ JHZ 4.02299
114 2ZTS ADP 4.38247
115 1HTW ADP 4.43038
116 1D2E GDP 4.5977
117 2FH5 GTP 4.5977
118 5TSH ANP 4.5977
119 5TSH ADP 4.5977
120 5L3W GDP 4.5977
121 3TMK T5A 4.5977
122 2QG6 NMN 4.5977
123 1XEX ATP 4.5977
124 3KTA AP5 4.5977
125 2GK6 ADP 4.5977
126 3H86 AP5 4.5977
127 2DPY ADP 4.5977
128 5Z69 AGS 4.5977
129 2PL3 ADP 4.5977
130 2D7D ADP 4.5977
131 5MEX SZZ 4.5977
132 5H4S RAM 4.5977
133 5MEX PAP 4.5977
134 5EP2 AZU 4.5977
135 3RC3 ANP 4.5977
136 5H67 ATP 4.5977
137 2VTD LKM 4.5977
138 1VKJ A3P 4.5977
139 4WOP CTP 4.88889
140 5MVR ADP 4.93827
141 1SKQ GDP 5.17241
142 1TQ4 GDP 5.17241
143 6AU6 GDP 5.17241
144 3VMF GTP 5.17241
145 1CS4 GSP 5.17241
146 4P4T GDP 5.17241
147 3DEF GDP 5.17241
148 2NCD ADP 5.17241
149 1UJ2 ADP 5.17241
150 2Q2Y ADP 5.17241
151 2Q2Y MKR 5.17241
152 1UJ2 C5P 5.17241
153 1F9V ADP 5.17241
154 1Z6T ADP 5.17241
155 2CE7 ADP 5.17241
156 4CVN ADP 5.17241
157 2KIN ADP 5.17241
158 5G41 AP5 5.17241
159 1OS1 ATP 5.17241
160 1OS1 PYR 5.17241
161 4RZ3 ADP 5.17241
162 2CBZ ATP 5.17241
163 3P4X ADP 5.17241
164 4QRH 0O2 5.17241
165 5LB3 ADP 5.17241
166 1YQT ADP 5.17241
167 5YV5 ADP 5.17241
168 4IHQ ADP 5.17241
169 4KBF AMP 5.17241
170 1J99 AND 5.17241
171 5AHM IMP 5.17241
172 2OBM ADP 5.17241
173 3L9W AMP 5.17241
174 3L9W GSH 5.17241
175 2D2F ADP 5.17241
176 5J1J ANP 5.26316
177 2RCN GDP 5.74713
178 4ZKD GDP 5.74713
179 5HCN GCP 5.74713
180 3WXM GTP 5.74713
181 2XTN GTP 5.74713
182 5N69 ADP 5.74713
183 1OFH ADP 5.74713
184 2XT3 ADP 5.74713
185 1G41 ADP 5.74713
186 1BG2 ADP 5.74713
187 2FNA ADP 5.74713
188 3FVQ ATP 5.74713
189 2PZE ATP 5.74713
190 3FB4 AP5 5.74713
191 4WZ6 ATP 5.74713
192 3QKT ANP 5.74713
193 4OHY ANP 5.74713
194 4IDN GNP 5.74713
195 1R0X ATP 5.74713
196 2QQ0 THM 5.74713
197 2QQ0 ANP 5.74713
198 2QQ0 ADP 5.74713
199 2QQ0 TMP 5.74713
200 4GBM A3P 5.74713
201 4TMK T5A 5.74713
202 2ZPT A3P 5.74713
203 4WEI GLC GAL 5.74713
204 4UXH T5A 5.74713
205 3MD0 GDP 6.32184
206 6G14 G4P 6.32184
207 5W76 GDP 6.32184
208 5L3R GCP 6.32184
209 3ZQ6 ADP ALF 6.32184
210 1W7J ADP BEF 6.32184
211 1IHU ADP 6.32184
212 1IHU AF3 6.32184
213 4WZA ACP 6.32184
214 4WZA ADP 6.32184
215 1K6M AGS 6.32184
216 4V03 ADP 6.32184
217 4TL6 ANP 6.32184
218 2CDN ADP 6.32184
219 3KJI ADP 6.32184
220 3RLF ANP 6.32184
221 1KO8 6PG 6.32184
222 1F5N GNP 6.32184
223 2B8W ALF 5GP 6.32184
224 2ZR9 DTP 6.32184
225 4ZDJ UTP 6.32184
226 4PPF FLC 6.32184
227 4PJ3 ANP 6.32184
228 1G3M A3P 6.32184
229 1G3M PCQ 6.32184
230 2GWH A3P 6.32184
231 3ITJ CIT 6.32184
232 3QDK QDK 6.32184
233 1F2U ATP 6.71141
234 6B8B ADP 6.82731
235 4M9Q GNP 6.89655
236 4HI0 GDP 6.89655
237 4ZG4 VO4 ADP 6.89655
238 1LVK MNT BEF 6.89655
239 5IRN ADP 6.89655
240 4HSE ADP 6.89655
241 2Y65 ADP 6.89655
242 3LRE ADP 6.89655
243 2RGX AP5 6.89655
244 4YDS ATP 6.89655
245 1P9B GDP 6.89655
246 5VHC BEF ADP 6.89655
247 5LTJ BEF 6.89655
248 5LTJ ADP 6.89655
249 1AKY AP5 6.89655
250 1JJV ATP 6.89655
251 1Z83 AP5 6.89655
252 3DKP ADP 6.89655
253 3B7G ANP 6.89655
254 2XAU ADP 6.89655
255 5LLB 6YZ 6.89655
256 2ZPA ADP 6.89655
257 6C90 ADP 6.89655
258 2ORV 4TA 6.89655
259 1OYY AGS 6.89655
260 2GQT FAD 6.89655
261 3MGB PAP 6.89655
262 5WPJ NDP 6.89655
263 1ZUI SKM 7.14286
264 4KFU ACP 7.47126
265 3ZS9 ADP ALF 7.47126
266 2WOJ ADP ALF 7.47126
267 4XVU ATP 7.47126
268 1GOJ ADP 7.47126
269 2QEN ADP 7.47126
270 4LYA ATP 7.47126
271 2FAH GDP 7.47126
272 5FHD ADP ALF 7.47126
273 5ZXD ATP 7.47126
274 1T5C ADP 7.47126
275 4TTQ ATP 7.47126
276 3EZ2 ADP 7.47126
277 5FTB ANP 7.47126
278 1UKZ ADP 7.47126
279 1FNN ADP 7.47126
280 6FAA ADP 7.47126
281 2FSH ANP 7.47126
282 5MZN ADP 7.47126
283 4R2I ANP 7.47126
284 3IO3 ADP 7.75862
285 1YRB GDP 8.01527
286 1WDT GTP 8.04598
287 1DAK DPU 8.04598
288 1DAK ADP 8.04598
289 5ZBR ANP 8.04598
290 6A20 ADP 8.04598
291 4QOS ADP 8.04598
292 2YOH WMJ 8.04598
293 2IS6 ADP 8.04598
294 5XDR ADP 8.04598
295 6DEF GCP 8.04598
296 1W4R TTP 8.04598
297 2X7I CIT 8.04598
298 1P3D ANP 8.04598
299 1P7T PYR 8.04598
300 3IUY AMP 8.04598
301 5J1S ATP 8.13008
302 4QM7 GTP 8.18713
303 5H7K GDP 8.62069
304 5H7J GCP 8.62069
305 3T34 GDP 8.62069
306 2VVG ADP 8.62069
307 4D81 ADP 8.62069
308 5BN3 ADP 8.62069
309 1W0J ADP 8.62069
310 3ZIA ATP 8.62069
311 4FCW ADP 8.62069
312 1W0J ADP BEF 8.62069
313 3ZIA ADP 8.62069
314 2GMV UN8 8.62069
315 1NHX FTB 8.62069
316 1NHX PEP 8.62069
317 2GMV PEP 8.62069
318 1XX6 ADP 8.62069
319 1U0J ADP 8.62069
320 1GXU 2HP 8.79121
321 4DCT GDP 9.1954
322 4J0Q GDP 9.1954
323 3CNL GNP 9.1954
324 4H1V GNP 9.1954
325 4PFO ADP 9.1954
326 2VB6 ADP BEF 9.1954
327 1NJF AGS 9.1954
328 3H4S ADP 9.1954
329 4FRZ ADP 9.1954
330 1NJF ADP 9.1954
331 3TBK ANP 9.1954
332 1XP8 AGS 9.1954
333 4A4Z ANP 9.1954
334 1T3D CYS 9.1954
335 4Z7X 3CX 9.1954
336 5M04 GDP 9.77011
337 3UIE ANP 9.77011
338 1R6B ADP 9.77011
339 1XKV ATP 9.77011
340 3BFX A3P 9.77011
341 6H5E ANP 9.77011
342 2B8T THM 9.77011
343 5CK5 GDP 10.3448
344 1M7G ADX 10.3448
345 4NE2 SH2 10.3448
346 4NE2 ADP 10.3448
347 1IWE IMP 10.3448
348 1M7G ADP 10.3448
349 1M7G AV2 10.3448
350 3HU3 AGS 10.3448
351 5AK0 8V1 10.3448
352 5IFS ADP 10.3448
353 5VGR GDP 10.3448
354 2Z5F A3P 10.3448
355 4TQK NAG 10.3448
356 1QHG ATP 10.3448
357 4XTR ATP 10.8108
358 4XTR ADP 10.8108
359 1LVG ADP 10.9195
360 1NN5 2DT 10.9195
361 1NN5 ANP 10.9195
362 1NY5 ADP 10.9195
363 2BEK ATP 10.9195
364 1XMV ADP 10.9195
365 2F3R G5P 10.9195
366 1T8U UAP SGN IDS SGN 10.9195
367 1T8U A3P 10.9195
368 2ODE ALF GDP 11.4943
369 5EXT ADP 11.4943
370 3DC4 ADP 11.4943
371 3Q9L ATP 11.4943
372 1NST A3P 11.4943
373 3T12 GDP ALF 11.7647
374 1SVK ALF GDP 12.069
375 6CRK GDP 12.069
376 1GP2 GDP 12.069
377 2OM2 GDP 12.069
378 1BH2 GSP 12.069
379 5KDO GDP 12.069
380 4LPS GDP 12.069
381 5IRR GSP 12.069
382 1QF5 GDP 12.069
383 1QF5 RPL 12.069
384 4XGU ADP 12.069
385 4BFW ZVW 12.069
386 3QVV 3QV 12.069
387 3QVV A3P 12.069
388 2F5X ASP 12.069
389 2WHX ADP 12.6437
390 4NU0 AP5 12.6437
391 1OE0 TTP 12.6437
392 5HR5 ADP 12.6437
393 4DDY DN6 12.6437
394 1AQU A3P 12.6437
395 5UIV ADP 12.7753
396 2BVN GNP 13.2184
397 1D8T GDP 13.2184
398 3U6B GDP 13.2184
399 2HCJ GDP 13.2184
400 4P3Y GDP 13.2184
401 5JBQ GDP 13.2184
402 4G5G GDP 13.2184
403 3U6K GDP 13.2184
404 4PC3 GDP 13.2184
405 4X8O AP5 13.2184
406 1GOT GDP 13.7931
407 1FQK GDP 14.3678
408 1FQJ GDP 14.3678
409 3E70 GDP 14.3678
410 2QZ4 ADP 14.3678
411 3NHB ADP 14.3678
412 1VHT BA3 14.3678
413 6B4K ANP 14.9425
414 4PX9 ADP 14.9425
415 1B7T ADP 15.3846
416 3EC1 GDP 15.5172
417 3QF7 ANP 15.5172
418 2ZJ5 ADP 15.5172
419 1KK8 BEF ADP 15.5844
420 1PUJ GNP 16.092
421 3IIJ ADP 16.092
422 2JLR ANP 16.092
423 2J5V PCA 16.092
424 2VWT PYR 16.092
425 3A4M ADP 16.6667
426 4RD0 GDP 17.2414
427 2QN6 GDP 17.2414
428 4BQS ADP 17.2414
429 4BQS K2Q 17.2414
430 4B47 GDP 17.8161
431 1RJ9 GCP 17.8161
432 4JLV ADP 17.8161
433 2QTV GNP 17.9641
434 1DAR GDP 18.3908
435 5KSP GDP 18.3908
436 5M7P ADP 18.3908
437 4BAS GNP 18.9655
438 1G7S GDP 19.5402
439 3CX8 GSP 19.5402
440 3AB3 GDP 19.5402
441 1ZCB GDP 19.5402
442 4OI4 ATP 20.1149
443 5YT0 GDP 20.6897
444 5FG3 GDP 20.6897
445 5WC2 ADP 20.6897
446 4R43 GDP 20.6897
447 4KVA GTP 21.8391
448 2IXE ATP 22.4138
449 2W58 ADP 22.9885
450 2C9O ADP 22.9885
451 5KSZ GCP 23.5632
452 5H68 AGS 23.5632
453 2V7Q ATP 24
454 2CK3 ANP 24
455 2CK3 ADP 24
456 2V7Q ADP 24
457 1Y3A GDP 25
458 1WF3 GNP 25.2874
459 1TAD ALF 25.8621
460 1TAD GDP 25.8621
461 3UYW TAU 25.8621
462 4NCN GTP 26.4368
463 4TMZ GSP 26.4368
464 1KK1 GNP 27.0115
465 5L3S GNP 27.0115
466 5L3V GDP 27.0115
467 4IEE AGS 27.0115
468 5L3S G 27.0115
469 4YLG GDP 28.3237
470 5W75 GDP 28.7356
471 4LJ9 ACP 28.7356
472 4ZI2 GNP 29.3103
473 5DI3 GNP 29.3103
474 4GOJ GNP 29.3103
475 1FZQ GDP 29.8343
476 4V0K GDP 30.1775
477 5KUT GDP 30.4598
478 3AQ4 GDP 31.0345
479 2J59 GTP 31.3253
480 1KSH GDP 31.6092
481 3PCR GTP 32.716
482 1MKY GDP 33.3333
483 2X77 GDP 33.8624
484 6CS8 F9Y 34.4828
485 1MR3 G3D 35.0575
486 2ZEJ GDP 36.7816
487 1UPT GTP 38.5965
488 3DOE GTP 39.0805
489 2A5F GTP 39.6552
490 5EE5 GTP 39.7661
491 4KAX GTP 40.2367
492 2W83 GTP 41.2121
493 3N5C GDP 42.5926
494 5UPK GNP 43.1034
495 1NF3 GNP 43.1034
496 4YC7 GNP 43.6782
497 2NGR GDP 43.6782
498 4DID GDP 43.6782
499 2WMO GTP 43.6782
500 1GRN GDP 43.6782
501 4ITR GDP 43.6782
502 1DS6 GDP 45.977
503 3T5G GDP 46.5517
504 1E96 GTP 46.5517
505 2FJU GSP 47.1264
506 1I4D GDP 47.1264
507 1HE1 GDP 47.1264
508 2W2X GSP 47.7011
509 4XOI GTP 47.7011
510 1G4U GDP 47.7011
511 3REF GDP 47.7011
512 5TB5 GDP 48.1081
513 5TAR GDP 48.1081
514 2CJW GDP 48.2759
515 4XSH GSP 48.2759
516 1OW3 GDP 48.2759
517 1TX4 ALF GDP 48.2759
518 6BCB GSP 48.8506
519 6BCA GSP 48.8506
520 1CXZ GSP 48.8506
521 4D0N GDP 48.8506
522 6BC0 GSP 48.8506
523 3GJ7 GDP 50
524 3GJ5 GDP 50
525 3GJ8 GDP 50
526 3GJ4 GDP 50
527 5JCP GDP ALF 50
528 3GJX GTP 50
529 5WRJ A3P 50
Pocket No.: 2; Query (leader) PDB : 1Z0A; Ligand: GDP; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 2) in the query (biounit: 1z0a.bio5) has 18 residues
No: Leader PDB Ligand Sequence Similarity
Pocket No.: 3; Query (leader) PDB : 1Z0A; Ligand: GDP; Similar sites found with APoc: 61
This union binding pocket(no: 3) in the query (biounit: 1z0a.bio5) has 16 residues
No: Leader PDB Ligand Sequence Similarity
1 2ZFZ ARG None
2 4KVX ACO None
3 2VOH CIT None
4 1S7N COA None
5 1GHE ACO 1.14943
6 2JEV NHQ 1.14943
7 2B4D COA 1.16959
8 2B4B COA 1.16959
9 4KOT CE3 1.85185
10 3EVF GTA 2.29885
11 2R75 01G 2.87356
12 1WWZ ACO 3.14465
13 2FXU BID 3.44828
14 2ZW5 COA 3.44828
15 3W9F I3P 3.44828
16 1BO4 COA 3.57143
17 5UMY TNN 3.57143
18 3KV8 FAH 3.59712
19 2JJK R15 4.02299
20 4AVB ACO 4.02299
21 5ZCT ANP 4.02299
22 3WQT ANP 4.02299
23 5WQP NCA 4.02299
24 4UTG ANP 4.04624
25 2VBQ BSJ 4.24242
26 2VAP GDP 4.3956
27 5K2M ADP 4.5977
28 4ZY1 4U5 4.5977
29 2Q6B HR2 5.17241
30 1H74 ADP 5.17241
31 3SXN COA 5.17241
32 1NM5 NAD 5.74713
33 2V5K OXM 5.74713
34 3R96 AMP 5.74713
35 3R96 ACO 5.74713
36 2VYN NAD 6.32184
37 1GAD NAD 6.32184
38 2A2C ADP 6.32184
39 2A2C NG1 6.32184
40 2VZZ SCA 6.32184
41 3BD9 A3P 6.89655
42 6EDV COA 6.89655
43 1ME8 RVP 7.47126
44 1PVN MZP 7.47126
45 6G96 ACO 7.47126
46 2V58 LZJ 8.04598
47 3ELW SAM 8.62069
48 4HUT ATP 8.62069
49 5KMS FAD 8.62069
50 3V2U ATP 10.3448
51 5TVJ COA 10.3448
52 5TVJ 7LF 10.3448
53 4ITM ATP 10.4762
54 5K04 COA 10.9195
55 5YGE GLU 12.6437
56 5YGE ACO 12.6437
57 2I4I AMP 14.9425
58 6ECT SAM 15.5172
59 4AF0 IMP 17.2414
60 5W75 SUC 28.7356
61 2WZF BGC 33.3333
Pocket No.: 4; Query (leader) PDB : 1Z0A; Ligand: GDP; Similar sites found with APoc: 37
This union binding pocket(no: 4) in the query (biounit: 1z0a.bio5) has 16 residues
No: Leader PDB Ligand Sequence Similarity
1 1DCP HBI None
2 1I1N SAH 1.14943
3 3FXU TSU 2.29885
4 1Q19 APC 2.29885
5 4QDI ATP 2.87356
6 4B9E FAH 3.44828
7 3CV2 OXL 3.44828
8 3SMA ACO 3.44828
9 2J0W ASP 3.44828
10 1JG3 ADN 3.44828
11 2VHJ ADP 3.44828
12 3NOJ PYR 3.44828
13 1YXM ADE 4.02299
14 4M52 FAD 4.02299
15 3KC1 2T6 4.02299
16 5NA1 FAD 4.02299
17 2Z3Y F2N 4.02299
18 5J5R IMP 4.5977
19 5J5R 6G1 4.5977
20 4LHD GLY 4.5977
21 5LU5 M7P 4.5977
22 5ZI9 FLC 4.5977
23 2VOS ADP 5.17241
24 2QZS ADP 5.74713
25 2QZS 250 5.74713
26 2QZS GLC 5.74713
27 5NM7 GLY 6.32184
28 4Z0G 5GP 6.89655
29 1YY5 FAD 6.89655
30 4NTO 1PW 8.04598
31 1RSG FAD 8.62069
32 5DYO FLU 8.62069
33 4KVL PLM 9.1954
34 1D6Z HY1 9.1954
35 3B8I OXL 9.77011
36 2QXL ATP 13.2184
37 1TB3 FMN 22.9885
Pocket No.: 5; Query (leader) PDB : 1Z0A; Ligand: GDP; Similar sites found with APoc: 13
This union binding pocket(no: 5) in the query (biounit: 1z0a.bio5) has 19 residues
No: Leader PDB Ligand Sequence Similarity
1 1XPJ TLA None
2 1OFU GDP 4.5977
3 5YZ2 AMP 5.55556
4 1WW5 SGA BGC 5.625
5 2C6Q NDP 5.74713
6 3T31 DCQ 8.04598
7 3T31 FAD 8.04598
8 2P3V SRT 8.04598
9 1G8S MET 9.1954
10 4OOE NDP 9.1954
11 1Q0H NDP 9.77011
12 1Q0H FOM 9.77011
13 1FWV SGA MAG FUC 11.194
Pocket No.: 6; Query (leader) PDB : 1Z0A; Ligand: GDP; Similar sites found with APoc: 8
This union binding pocket(no: 6) in the query (biounit: 1z0a.bio3) has 18 residues
No: Leader PDB Ligand Sequence Similarity
1 2IID PHE 2.87356
2 2IID FAD 2.87356
3 3G5N PB2 5.17241
4 4ZJS 4P0 5.17241
5 2VVL FAD 5.74713
6 2VVM FAD 5.74713
7 5T67 JHZ 5.74713
8 5TS5 FAD 6.32184
Pocket No.: 7; Query (leader) PDB : 1Z0A; Ligand: GDP; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 7) in the query (biounit: 1z0a.bio7) has 16 residues
No: Leader PDB Ligand Sequence Similarity
Pocket No.: 8; Query (leader) PDB : 1Z0A; Ligand: GDP; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 8) in the query (biounit: 1z0a.bio7) has 19 residues
No: Leader PDB Ligand Sequence Similarity
Pocket No.: 9; Query (leader) PDB : 1Z0A; Ligand: GDP; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 9) in the query (biounit: 1z0a.bio6) has 16 residues
No: Leader PDB Ligand Sequence Similarity
Pocket No.: 10; Query (leader) PDB : 1Z0A; Ligand: GDP; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 10) in the query (biounit: 1z0a.bio6) has 18 residues
No: Leader PDB Ligand Sequence Similarity
Pocket No.: 11; Query (leader) PDB : 1Z0A; Ligand: GDP; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 11) in the query (biounit: 1z0a.bio4) has 16 residues
No: Leader PDB Ligand Sequence Similarity
Pocket No.: 12; Query (leader) PDB : 1Z0A; Ligand: GDP; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 12) in the query (biounit: 1z0a.bio2) has 16 residues
No: Leader PDB Ligand Sequence Similarity
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