Receptor
PDB id Resolution Class Description Source Keywords
1YQD 1.65 Å EC: 1.1.1.195 SINAPYL ALCOHOL DEHYDROGENASE COMPLEXED WITH NADP+ POPULUS TREMULOIDES LIGNIN MONOLIGNOL OXIDOREDUCTASE ZINC-DEPENDENT PLANT DEBIOSYNTHESIS SUBSTRATE INHIBITION MEDIUM-CHAIN DEHYDROGENSE/REDUCTASE
Ref.: STRUCTURAL AND KINETIC BASIS FOR SUBSTRATE SELECTIV POPULUS TREMULOIDES SINAPYL ALCOHOL DEHYDROGENASE. PLANT CELL V. 17 1598 2005
Ligand
Ligand Chain:Residue Validity Ligand Warnings Binding Data NGL Viewer Molecular Weight (Da) Formula SMILES
DTT A:700;
B:800;
Invalid;
Invalid;
none;
none;
submit data
154.251 C4 H10 O2 S2 C([C@...
GOL B:900;
Invalid;
none;
submit data
92.094 C3 H8 O3 C(C(C...
NAP A:500;
B:600;
Valid;
Valid;
none;
none;
submit data
743.405 C21 H28 N7 O17 P3 c1cc(...
ZN A:1000;
A:2000;
B:3000;
B:4000;
Part of Protein;
Part of Protein;
Part of Protein;
Part of Protein;
none;
none;
none;
none;
submit data
65.409 Zn [Zn+2...
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90% Homology Family
Leader
PDB id Resolution Class Description Source Keywords
1YQD 1.65 Å EC: 1.1.1.195 SINAPYL ALCOHOL DEHYDROGENASE COMPLEXED WITH NADP+ POPULUS TREMULOIDES LIGNIN MONOLIGNOL OXIDOREDUCTASE ZINC-DEPENDENT PLANT DEBIOSYNTHESIS SUBSTRATE INHIBITION MEDIUM-CHAIN DEHYDROGENSE/REDUCTASE
Ref.: STRUCTURAL AND KINETIC BASIS FOR SUBSTRATE SELECTIV POPULUS TREMULOIDES SINAPYL ALCOHOL DEHYDROGENASE. PLANT CELL V. 17 1598 2005
Members (2)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 2 families.
1 1YQD - NAP C21 H28 N7 O17 P3 c1cc(c[n+]....
2 1YQX - NAP C21 H28 N7 O17 P3 c1cc(c[n+]....
70% Homology Family (4)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 1068 families.
1 5FI3 - NAP C21 H28 N7 O17 P3 c1cc(c[n+]....
2 5VKT - NAP C21 H28 N7 O17 P3 c1cc(c[n+]....
3 1YQD - NAP C21 H28 N7 O17 P3 c1cc(c[n+]....
4 1YQX - NAP C21 H28 N7 O17 P3 c1cc(c[n+]....
50% Homology Family (6)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 922 families.
1 5H81 - NAP C21 H28 N7 O17 P3 c1cc(c[n+]....
2 5FI3 - NAP C21 H28 N7 O17 P3 c1cc(c[n+]....
3 5VKT - NAP C21 H28 N7 O17 P3 c1cc(c[n+]....
4 1YQD - NAP C21 H28 N7 O17 P3 c1cc(c[n+]....
5 1YQX - NAP C21 H28 N7 O17 P3 c1cc(c[n+]....
6 3TWO - NDP C21 H30 N7 O17 P3 c1nc(c2c(n....
Polypharmacology
Similar Ligands
Ligand no: 1; Ligand: NAP; Similar ligands found: 127
No: Ligand ECFP6 Tc MDL keys Tc
1 NAP 1 1
2 NA0 0.881356 0.986301
3 TAP 0.872881 0.934211
4 NDO 0.840336 0.972603
5 NAD 0.811966 0.986111
6 N01 0.733871 0.958904
7 A3D 0.712 0.972603
8 NBP 0.707692 0.935065
9 NAD IBO 0.688 0.921053
10 NHD 0.68254 0.958904
11 NJP 0.661417 0.972973
12 NAJ PYZ 0.659091 0.898734
13 NFD 0.658915 0.934211
14 DND 0.619048 0.959459
15 NXX 0.619048 0.959459
16 ZID 0.605839 0.972603
17 NAQ 0.59854 0.922078
18 ATR 0.59292 0.917808
19 NAE 0.591241 0.946667
20 NDE 0.58042 0.986301
21 A22 0.571429 0.958904
22 AMP NAD 0.571429 0.933333
23 NAJ 0.567164 0.986111
24 A2R 0.563025 0.932432
25 NDC 0.561644 0.922078
26 NA7 0.552846 0.907895
27 ODP 0.551471 0.935065
28 A2P 0.539823 0.930556
29 8ID 0.537313 0.910256
30 NAD BBN 0.525974 0.865854
31 NPW 0.525547 0.8875
32 CNA 0.521739 0.959459
33 NZQ 0.521739 0.910256
34 NAD CJ3 0.519231 0.835294
35 NDP 0.514493 0.922078
36 PO4 PO4 A A A A PO4 0.503937 0.930556
37 DG1 0.503401 0.922078
38 1DG 0.503401 0.922078
39 NAD TDB 0.5 0.696078
40 TXP 0.5 0.922078
41 NMN AMP PO4 0.492958 0.921053
42 XNP 0.492958 0.875
43 25L 0.492308 0.958904
44 25A 0.492063 0.972222
45 NAD NDT 0.490909 0.747368
46 NMN 0.486726 0.888889
47 NGD 0.485714 0.935065
48 2AM 0.477876 0.891892
49 ADP 0.458333 0.945205
50 PAP 0.451613 0.931507
51 ADP MG 0.45082 0.906667
52 BEF ADP 0.447154 0.883117
53 ADP BEF 0.447154 0.883117
54 A2D 0.445378 0.945205
55 AN2 0.442623 0.932432
56 ADP PO3 0.44 0.944444
57 SAP 0.44 0.896104
58 AGS 0.44 0.896104
59 M33 0.439024 0.906667
60 AR6 AR6 0.438849 0.945205
61 BA3 0.438017 0.945205
62 ATP MG 0.436508 0.906667
63 ADP BMA 0.43609 0.92
64 OAD 0.43609 0.92
65 ATP 0.435484 0.945205
66 OOB 0.435115 0.958904
67 B4P 0.434426 0.945205
68 AP5 0.434426 0.945205
69 GAP 0.433071 0.92
70 0WD 0.432432 0.922078
71 5FA 0.432 0.945205
72 2A5 0.432 0.87013
73 AQP 0.432 0.945205
74 00A 0.428571 0.909091
75 CA0 0.427419 0.92
76 ALF ADP 0.426357 0.871795
77 ADP ALF 0.426357 0.871795
78 ACP 0.424 0.92
79 NAJ PZO 0.423841 0.897436
80 9SN 0.423358 0.897436
81 VO4 ADP 0.423077 0.932432
82 ANP MG 0.423077 0.896104
83 ADP VO4 0.423077 0.932432
84 WAQ 0.422222 0.884615
85 ACQ 0.421875 0.92
86 V3L 0.421875 0.945205
87 ADQ 0.421053 0.92
88 AR6 0.420635 0.918919
89 APR 0.420635 0.918919
90 ATP A A A 0.42029 0.958333
91 CO7 0.419753 0.786517
92 1ZZ 0.419118 0.841463
93 3OD 0.419118 0.92
94 DLL 0.41791 0.958904
95 AD9 0.417323 0.92
96 NAX 0.416667 0.875
97 OVE 0.416667 0.857143
98 MYR AMP 0.416058 0.841463
99 AV2 0.415385 0.868421
100 A3P 0.414634 0.944444
101 NNR 0.414414 0.72973
102 ALF ADP 3PG 0.413793 0.8625
103 OMR 0.413793 0.831325
104 LA8 ALF 3PG 0.413793 0.8625
105 ANP 0.410853 0.92
106 A1R 0.410448 0.860759
107 ABM 0.409836 0.893333
108 AMP 0.408333 0.944444
109 A 0.408333 0.944444
110 SON 0.408 0.933333
111 PPS 0.407692 0.829268
112 5AL 0.407692 0.932432
113 TYR AMP 0.407143 0.933333
114 NAI 0.406897 0.909091
115 7D3 0.406504 0.857143
116 DAL AMP 0.406015 0.932432
117 ADX 0.404762 0.829268
118 ATF 0.40458 0.907895
119 3UK 0.404412 0.945946
120 AMP DBH 0.404255 0.894737
121 139 0.402685 0.875
122 AMP MG 0.401639 0.893333
123 50T 0.401575 0.906667
124 SRP 0.401515 0.907895
125 A A 0.40146 0.972222
126 FA5 0.4 0.933333
127 3AM 0.4 0.90411
Similar Binding Sites (Proteins are less than 50% similar to leader)
Pocket No.: 1; Query (leader) PDB : 1YQD; Ligand: NAP; Similar sites found: 298
This union binding pocket(no: 1) in the query (biounit: 1yqd.bio1) has 34 residues
No: Leader PDB Ligand P-value (APoc) PS_Score (APoc) Sequence Similarity
1 3A06 FOM 0.001329 0.41546 1.36612
2 3A06 NDP 0.001138 0.41546 1.36612
3 1HDG NAD 0.001349 0.43097 1.50602
4 3VPH OXM 0.0001766 0.44642 1.6129
5 3VPH NAD 0.000312 0.43462 1.6129
6 2I3G NAP 0.0002629 0.44327 1.63934
7 3GD4 NAD 0.006786 0.4155 1.63934
8 1N1G BCP 0.003165 0.4004 1.63934
9 3ABI NAD 0.000009962 0.50063 1.64384
10 1F06 NDP 0.00001847 0.48086 1.875
11 1F06 2NP 0.00001847 0.48086 1.875
12 1QMG APX 0.002602 0.42538 1.91257
13 1H82 GZZ 0.003946 0.4181 1.91257
14 3OJO NAD 0.0001554 0.41253 1.91257
15 5FJN BE2 0.003302 0.41001 1.91257
16 1TB4 PEJ 0.002367 0.40996 1.91257
17 5FJN FAD 0.002842 0.40965 1.91257
18 1GV0 NAD 0.00001937 0.46703 1.93548
19 3GXW SIN 0.04706 0.40378 1.94175
20 3WBF NAP 0.00002609 0.45932 1.96721
21 3WBF API 0.0001028 0.45215 1.96721
22 1B8U OAA 0.0009922 0.41332 2.12766
23 1B8U NAD 0.00009553 0.41175 2.12766
24 2G5C NAD 0.001229 0.40431 2.13523
25 2A92 NAI 0.0000857 0.45181 2.18069
26 4OOE NDP 0.0002657 0.41925 2.18579
27 5H6S HDH 0.03305 0.41172 2.18579
28 4G8R 96P 0.04202 0.40575 2.18579
29 4GUS FAD 0.004215 0.40506 2.18579
30 4FWE FAD 0.004075 0.40469 2.18579
31 1V59 FAD 0.004833 0.4037 2.18579
32 4HSU FAD 0.004747 0.4031 2.18579
33 4GUT FAD 0.005526 0.40235 2.18579
34 2VVL FAD 0.004094 0.40168 2.18579
35 5VN0 NAI 0.006071 0.40164 2.18579
36 2VVM FAD 0.0044 0.40051 2.18579
37 1UXG NAD 0.0000446 0.47258 2.26537
38 1UXG FUM 0.005276 0.42379 2.26537
39 5JE8 NAD 0.0002255 0.46269 2.31788
40 3OND ADN 0.00004254 0.48432 2.45902
41 3OND NAD 0.00004254 0.48432 2.45902
42 1PZG A3D 0.00003722 0.44888 2.45902
43 1DLJ UGA 0.0004121 0.44842 2.45902
44 1DLJ NAI 0.0004583 0.44664 2.45902
45 1GR0 NAD 0.0002487 0.4396 2.45902
46 4KQW NAP 0.0002902 0.43715 2.45902
47 4J36 FAD 0.00275 0.40264 2.45902
48 4J36 1HR 0.004753 0.40215 2.45902
49 5MBX FAD 0.008176 0.40134 2.45902
50 5MBX SP5 0.008176 0.40134 2.45902
51 1RYI FAD 0.004702 0.40042 2.45902
52 5KKA 6V0 0.00014 0.44398 2.5641
53 5F2T PLM 0.008745 0.42192 2.5974
54 3LZW NAP 0.008746 0.40233 2.71084
55 3LZW FAD 0.003998 0.4 2.71084
56 1K1Y MAL 0.01276 0.42544 2.73224
57 1Q0H NDP 0.002816 0.41446 2.73224
58 1Q0H FOM 0.002651 0.41365 2.73224
59 1PGP 6PG 0.002763 0.40374 2.73224
60 3H8V ATP 0.00005299 0.40951 2.73973
61 1SOW NAD 0.00002017 0.47421 2.7439
62 5DN9 NAD 0.000305 0.43497 2.74725
63 4WNP 3RJ 0.01953 0.40519 2.78746
64 1OMO NAD 0.00003587 0.43819 2.79503
65 4CJX NAP 0.00064 0.44419 2.82132
66 1YS4 NAP 0.00008146 0.41718 2.82486
67 1EZ4 NAD 0.00003162 0.44777 2.83019
68 1NPD NAD 0.0005967 0.44888 3.00546
69 2GSD NAD 0.0003589 0.43512 3.00546
70 1OFL NGK GCD 0.0128 0.43378 3.00546
71 1E5Q NDP 0.000158 0.43355 3.00546
72 1U1I NAD 0.001196 0.41467 3.00546
73 1XHC FAD 0.001858 0.4101 3.00546
74 3WQQ IB3 0.002663 0.40971 3.00546
75 3WQQ NDP 0.002663 0.40971 3.00546
76 1C3V NDP 0.001122 0.40872 3.00546
77 1VI2 NAD 0.0002052 0.40588 3.00546
78 4EDF UPG 0.002824 0.41441 3.03644
79 3CIF NAD 0.0008517 0.40739 3.06407
80 3CIF G3H 0.002231 0.40353 3.06407
81 2ZB3 NDP 0.00002014 0.46627 3.11615
82 1J5P NAD 0.0005487 0.41078 3.16206
83 1Z82 NDP 0.0001088 0.46807 3.27869
84 5F7U GLC GLC 0.006183 0.45093 3.27869
85 1EBF NAD 0.0001715 0.41668 3.35196
86 5GZ6 NDP 0.00001559 0.52962 3.37423
87 5GZ6 7C3 0.00003069 0.507 3.37423
88 3OA2 NAD 0.001892 0.41636 3.45912
89 1WP4 NDP 0.0000328 0.45223 3.46021
90 2CVZ NDP 0.0001325 0.42797 3.46021
91 1GUZ NAD 0.00001079 0.47145 3.54839
92 2BH9 NAP 0.0007051 0.47408 3.55191
93 4DPL NAP 0.0001311 0.45793 3.55191
94 5T9F TYR 0.0001718 0.44953 3.55191
95 1RYD NDP 0.0002112 0.44621 3.55191
96 1MV8 NAD 0.00004812 0.4414 3.55191
97 5T9F NAP 0.0002731 0.44079 3.55191
98 5T9E NAP 0.00006684 0.43979 3.55191
99 1H6C SIN 0.0003857 0.43896 3.55191
100 2NAD NAD 0.0003944 0.43362 3.55191
101 1H6C NDP 0.0005607 0.43052 3.55191
102 1MUU NAD 0.0001847 0.41849 3.55191
103 3CGD NAD 0.009339 0.41148 3.55191
104 3CGD FAD 0.009339 0.41148 3.55191
105 3CGD COA 0.009339 0.41148 3.55191
106 2B4R AES 0.001157 0.40618 3.55191
107 2B4R NAD 0.001657 0.40312 3.55191
108 2WPF FAD 0.02095 0.40309 3.55191
109 2WPF WPF 0.02473 0.40129 3.55191
110 4MDB RLT 0.02691 0.41554 3.55556
111 1DIG L37 0.001341 0.41157 3.59477
112 1DIG NAP 0.001162 0.41157 3.59477
113 4D79 ATP 0.00007607 0.50927 3.62319
114 2HJR APR 0.00002298 0.51232 3.65854
115 2CVQ NDP 0.000246 0.42531 3.66972
116 2DT5 NAD 0.00001333 0.49985 3.79147
117 4BVA NDP 0.00003274 0.46407 3.82514
118 4BVA T3 0.0001058 0.45864 3.82514
119 4XYB NDP 0.0001586 0.44086 3.82514
120 3KB6 NAD 0.00008364 0.43946 3.82514
121 3GGO NAI 0.001182 0.42298 3.82514
122 3GGO ENO 0.001182 0.42298 3.82514
123 1O0S NAI 0.0003554 0.40125 3.82514
124 4MP8 NAD 0.0001243 0.45473 3.83481
125 1OAA OAA 0.005198 0.40067 3.861
126 1Y8Q ATP 0.0005054 0.45188 3.90625
127 2GZ3 NAP 0.0001141 0.46892 4.09836
128 1SC6 NAD 0.0001181 0.44651 4.09836
129 1ZH8 NAP 0.00007576 0.43905 4.11765
130 2HMT NAI 0.0001855 0.40599 4.16667
131 1I0Z NAI 0.00001394 0.47168 4.2042
132 1HYH NAD 0.000009884 0.48132 4.20712
133 1O6Z NAD 0.0000136 0.45075 4.29043
134 5U5G NAP 0.00005611 0.47564 4.40678
135 5CAE COA 0.0005754 0.44953 4.47284
136 5CAE SIN 0.002337 0.4028 4.47284
137 1HKU NAD 0.00005906 0.46762 4.64481
138 4E5N NAD 0.00006182 0.45348 4.64481
139 1J49 NAD 0.00006888 0.44509 4.64481
140 2O4C NAD 0.0001804 0.4371 4.64481
141 1J0X NAD 0.00218 0.41499 4.64481
142 1DSS NAD 0.0004801 0.40537 4.64481
143 3NYC FAD 0.006305 0.40345 4.64481
144 1LTH NAD 0.00003361 0.43739 4.70219
145 3NJ4 AFX 0.0006225 0.4753 4.91803
146 3NJ4 NAD 0.0007356 0.4722 4.91803
147 4KP7 NAP 0.002533 0.41622 4.91803
148 4KP7 1UQ 0.00204 0.41608 4.91803
149 2AHR NAP 0.001635 0.41347 4.91803
150 1ZMD NAI 0.003653 0.41328 4.91803
151 2NU8 COA 0.000382 0.41254 4.91803
152 3D3W NAP 0.002077 0.40466 4.91803
153 1PR9 NAP 0.002494 0.40177 4.91803
154 5UAV NDP 0.00006362 0.46412 4.96894
155 5UAV TFB 0.00006362 0.46412 4.96894
156 2ZB4 5OP 0.00003229 0.47779 5.04202
157 2ZB4 NAP 0.00002961 0.47779 5.04202
158 1BW9 NAD 0.0001045 0.48882 5.05618
159 1BXG NAD 0.0002471 0.41866 5.05618
160 1C1X NAD 0.0001648 0.46453 5.07042
161 4PLG NAI 0.0000264 0.47964 5.08982
162 1V6A TRE 0.0001057 0.54846 5.12048
163 1CER NAD 0.001133 0.43093 5.13595
164 5MQ6 NDP 0.005472 0.41169 5.19126
165 4UHF BUA 0.01561 0.40987 5.19126
166 4XB2 HSE 0.00149 0.40733 5.19126
167 4XB2 NDP 0.0003403 0.40586 5.19126
168 3T31 DCQ 0.00828 0.40257 5.19126
169 3T31 FAD 0.007607 0.40257 5.19126
170 4XDY NAI 0.00003315 0.49248 5.32544
171 3BAZ NAP 0.000005519 0.52848 5.46448
172 1DXY NAD 0.00004376 0.44357 5.46448
173 4D3F NAP 0.0000114 0.44337 5.46448
174 1GQ2 NAP 0.0005176 0.41569 5.46448
175 3H9E NAD 0.0004613 0.40956 5.46448
176 2VYN NAD 0.0007685 0.4089 5.46448
177 4E13 NAD 0.00008782 0.40763 5.46448
178 1YJQ NAP 0.0003219 0.43412 5.61056
179 4MDH NAD 0.0001624 0.4612 5.68862
180 5MDH NAD 0.0001927 0.42574 5.70571
181 2HK9 NAP 0.000004992 0.47464 5.7377
182 2HK9 ATR 0.000000146 0.4406 5.7377
183 5E4R NAP 0.0003651 0.4192 5.7377
184 3FWN ATR 0.0009595 0.41817 5.7377
185 1HYE NAP 0.000139 0.41466 5.7377
186 3B1F NAD 0.00005721 0.42473 5.86207
187 1T26 NAI 0.0001107 0.46284 5.90062
188 9LDB NAD 0.00001438 0.4753 6.01093
189 9LDT NAD 0.00001467 0.47504 6.01093
190 2VHW NAI 0.000475 0.43193 6.01093
191 4XDZ NDP 0.0005092 0.40365 6.12245
192 4J4H NAI 0.000068 0.47542 6.28415
193 4J4H 1J1 0.000068 0.47542 6.28415
194 4K28 NAD 0.000123 0.47344 6.28415
195 4JK3 NAD 0.00001383 0.46049 6.28415
196 2RAB NAD 0.008735 0.40693 6.28415
197 2Z3Y F2N 0.004804 0.40197 6.28415
198 1SAY PYR 0.001001 0.4175 6.6482
199 4ZGS NAD 0.00006745 0.4323 6.8306
200 1LDM NAD 0.00001566 0.49313 6.99088
201 4HXY NDP 0.001482 0.40421 7.07763
202 2GCG NDP 0.00006326 0.44811 7.10383
203 1LSS NAD 0.00007713 0.41011 7.10383
204 4RDH AMP 0.0001048 0.51351 7.37705
205 1V8B NAD 0.00001412 0.48821 7.37705
206 1WDK NAD 0.0001855 0.40871 7.37705
207 2VT3 ATP 0.00001097 0.40177 7.44186
208 1U8X NAD 0.0004434 0.44728 7.65027
209 5U8U FAD 0.009398 0.40503 7.9235
210 3QWB NDP 0.00001004 0.49651 8.08383
211 5N2I NAP 0.000146 0.40735 8.18966
212 4JGT PYR 0.02194 0.41776 8.3612
213 5LD5 NAD 0.002238 0.42815 8.37989
214 1UWK NAD 0.001925 0.41896 8.46994
215 1UWK URO 0.001925 0.41896 8.46994
216 5KVS NAP 0.006793 0.40493 8.57143
217 5O4J 9KH 0.002358 0.4039 8.75912
218 5O4J SAH 0.002358 0.4039 8.75912
219 5O4J PJL 0.002201 0.40374 8.75912
220 1NVT NAP 0.00001534 0.44882 9.01639
221 2YVF NAD 0.003101 0.42225 9.01639
222 2YVF FAD 0.003158 0.42123 9.01639
223 1RSG FAD 0.003014 0.40868 9.01639
224 1YY5 FAD 0.003649 0.40744 9.01639
225 2EV9 SKM 0.0002889 0.43874 9.12547
226 2EV9 NAP 0.0002889 0.43278 9.12547
227 5A7Y SAH 0.04314 0.4016 9.29487
228 2F5Z FAD 0.00388 0.40549 9.375
229 2F1K NAP 0.0001412 0.46722 9.56284
230 2DBZ NAP 0.000009502 0.47492 9.58084
231 5M67 NAD 0.00007106 0.47683 9.83607
232 5M67 3D1 0.00007957 0.47494 9.83607
233 5M67 ADE 0.0000815 0.47454 9.83607
234 3HAD NAD 0.004734 0.40664 9.83607
235 1LVL NAD 0.00144 0.44327 10.3825
236 1KOL NAD 0.000004932 0.50504 10.6557
237 1O8B ABF 0.04002 0.40334 11.4155
238 1LDN NAD 0.00007227 0.4508 11.4754
239 3B6Z CO7 0.00049 0.42511 11.4754
240 1M2W NAD 0.003067 0.42235 11.7486
241 4YEE 4CQ 0.0393 0.40762 12.2222
242 1X7D ORN 0.00001964 0.48439 12.2951
243 1X7D NAD 0.000009012 0.47653 12.2951
244 2WQ4 SFU 0.02714 0.41756 12.8205
245 2B5W NAP 0.00001302 0.4743 12.8852
246 3FZG SAM 0.01914 0.40561 13
247 4XZ3 COA 0.00123 0.43917 13.0435
248 3NGL NAP 0.0003747 0.40017 13.0435
249 1NYT NAP 0.00001322 0.45625 13.1148
250 3CMC NAD 0.0123 0.40095 13.1737
251 1MO9 KPC 0.01467 0.40444 13.388
252 1JAY NAP 0.0001005 0.41743 13.6792
253 3SQP FAD 0.0352 0.40989 13.9344
254 2DC1 NAD 0.0007049 0.40659 14.8305
255 4A0S NAP 0.0000002692 0.55552 15.0273
256 4WAS NAP 0.00006314 0.46424 15.0273
257 4WAS COO 0.0003564 0.43653 15.0273
258 1N9G NAP 0.0000234 0.45198 15.3005
259 4YCA NDP 0.0004806 0.44588 15.6463
260 4B7X NAP 0.00002248 0.47616 15.847
261 5L95 AMP 0.00004659 0.51375 16.25
262 1NVM NAD 0.0001816 0.43676 17.3077
263 4RVU NDP 0.000004505 0.49674 18.306
264 2J8Z NAP 0.00001413 0.47104 18.5792
265 5DOZ NDP 0.00001815 0.47954 19.2308
266 5DP2 NAP 0.00004669 0.44899 19.2982
267 2DM6 IMN 0.00003166 0.47946 20.4918
268 2DM6 NAP 0.00004204 0.47353 20.4918
269 1YKF NAP 0.000004231 0.49069 24.0437
270 3JYN NDP 0.0000006375 0.53243 24.3077
271 1KEV NDP 0.000004971 0.50168 24.3169
272 1YB5 NAP 0.000009056 0.49217 27.9202
273 2DFV NAD 0.00001605 0.46324 28.8184
274 3GFB NAD 0.000007585 0.51369 28.8571
275 4JBI NDP 0.000006797 0.52478 29.235
276 4RQU NAD 0.00000001589 0.57061 29.7814
277 2CDC XYP 0.00002227 0.50992 30.0546
278 2CDC XYS 0.0000274 0.50632 30.0546
279 2CDC NAP 0.0000274 0.50632 30.0546
280 4IDC NDP 0.00002194 0.47655 30.4217
281 4IDC 1XX 0.00002194 0.47655 30.4217
282 1F8F NAD 0.00000004224 0.5398 30.6011
283 1PL6 572 0.00002318 0.47214 31.7416
284 1PL6 NAD 0.000003577 0.45195 31.7416
285 1U3U BNF 0.000000002221 0.64003 33.3333
286 1CDO NAD 0.0000000004999 0.60815 33.3333
287 1U3U NAD 0.000000002221 0.55833 33.3333
288 1R37 NAD 0.0000000001354 0.66846 33.7176
289 1E3I CXF 0.00000001264 0.57167 35.5191
290 1D1T NAD 0.000000002333 0.61569 35.7924
291 2FZW NAD 0.0000001987 0.56794 37.2654
292 1P0F NAP 0.0000000005335 0.63895 39.8907
293 3JV7 NAD 0.0000000009881 0.65339 40.5797
294 4GKV NAD 0.00000000000336 0.72711 43.4524
295 4W6Z 8ID 0.000000000007895 0.71864 43.804
296 3WLE NAD 0.0000000003994 0.65584 44.2815
297 1H2B NAJ 0.0000000001874 0.66088 45.1253
298 1LLU NAD 0.000000000001074 0.74521 47.076
Pocket No.: 2; Query (leader) PDB : 1YQD; Ligand: NAP; Similar sites found: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 2) in the query (biounit: 1yqd.bio1) has 34 residues
No: Leader PDB Ligand P-value (APoc) PS_Score (APoc) Sequence Similarity
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