Receptor
PDB id Resolution Class Description Source Keywords
1Y2V 1.9 Å NON-ENZYME: BINDING CRYSTAL STRUCTURE OF THE COMMON EDIBLE MUSHROOM (AGARICUS BI LECTIN IN COMPLEX WITH T-ANTIGEN AGARICUS BISPORUS ABL AGARICUS BISPORUS LECTIN MUSHROOM T-ANTIGEN SUGAR BPROTEIN
Ref.: THE ANTINEOPLASTIC LECTIN OF THE COMMON EDIBLE MUSH (AGARICUS BISPORUS) HAS TWO BINDING SITES, EACH SPE A DIFFERENT CONFIGURATION AT A SINGLE EPIMERIC HYDR J.BIOL.CHEM. V. 280 10614 2005
Ligand
Ligand Chain:Residue Validity Ligand Warnings Binding Data NGL Viewer Molecular Weight (Da) Formula SMILES
NGA SER GAL C:1;
D:1;
Valid;
Valid;
none;
none;
submit data
n/a n/a
View in 3D viewer
90% Homology Family
Leader
PDB id Resolution Class Description Source Keywords
1Y2W 1.74 Å NON-ENZYME: BINDING CRYSTAL STRUCTURE OF THE ORTHORHOMBIC FORM OF THE COMMON EDI MUSHROOM (AGARICUS BISPORUS) LECTIN IN COMPLEX WITH T-ANTIGA CETYLGLUCOSAMINE AGARICUS BISPORUS ABL AGARICUS BISPORUS LECTIN MUSHROOM T-ANTIGEN SUGAR BPROTEIN
Ref.: THE ANTINEOPLASTIC LECTIN OF THE COMMON EDIBLE MUSH (AGARICUS BISPORUS) HAS TWO BINDING SITES, EACH SPE A DIFFERENT CONFIGURATION AT A SINGLE EPIMERIC HYDR J.BIOL.CHEM. V. 280 10614 2005
Members (4)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 552 families.
1 1Y2U - NAG GAL n/a n/a
2 1Y2X - NGA SER GAL n/a n/a
3 1Y2W - NAG C8 H15 N O6 CC(=O)N[C@....
4 1Y2V - NGA SER GAL n/a n/a
70% Homology Family (6)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 426 families.
1 1Y2U - NAG GAL n/a n/a
2 1Y2X - NGA SER GAL n/a n/a
3 1Y2W - NAG C8 H15 N O6 CC(=O)N[C@....
4 1Y2V - NGA SER GAL n/a n/a
5 4Z2Q - NDG C8 H15 N O6 CC(=O)N[C@....
6 4Z2S - NDG C8 H15 N O6 CC(=O)N[C@....
50% Homology Family (6)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 322 families.
1 1Y2U - NAG GAL n/a n/a
2 1Y2X - NGA SER GAL n/a n/a
3 1Y2W - NAG C8 H15 N O6 CC(=O)N[C@....
4 1Y2V - NGA SER GAL n/a n/a
5 4Z2Q - NDG C8 H15 N O6 CC(=O)N[C@....
6 4Z2S - NDG C8 H15 N O6 CC(=O)N[C@....
Polypharmacology
Similar Ligands (2D)
Ligand no: 1; Ligand: NGA SER GAL; Similar ligands found: 0
No: Ligand ECFP6 Tc MDL keys Tc
Similar Ligands (3D)
Ligand no: 1; Ligand: NGA SER GAL; Similar ligands found: 3
No: Ligand Similarity coefficient
1 NGA SER GAL 1.0000
2 A2G SER GAL 0.9453
3 A2G THR GAL 0.8984
Similar Binding Sites (Proteins are less than 50% similar to leader)
Pocket No.: 1; Query (leader) PDB : 1Y2W; Ligand: NAG; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 1) in the query (biounit: 1y2w.bio1) has 12 residues
No: Leader PDB Ligand Sequence Similarity
Pocket No.: 2; Query (leader) PDB : 1Y2W; Ligand: NAG; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 2) in the query (biounit: 1y2w.bio1) has 12 residues
No: Leader PDB Ligand Sequence Similarity
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