Receptor
PDB id Resolution Class Description Source Keywords
1Y0Y 1.6 Å EC: 3.-.-.- CRYSTAL STRUCTURE OF TETRAHEDRAL AMINOPEPTIDASE FROM P. HORI COMPLEX WITH AMASTATIN PYROCOCCUS HORIKOSHII AMINOPEPTIDASE PDZ HYDROLASE-HYDROLASE INHIBITOR COMPLEX
Ref.: CRYSTAL STRUCTURE OF TET PROTEASE REVEALS COMPLEMEN PROTEIN DEGRADATION PATHWAYS IN PROKARYOTES J.MOL.BIOL. V. 346 1207 2005
Ligand
Ligand Chain:Residue Validity Ligand Warnings Binding Data NGL Viewer Molecular Weight (Da) Formula SMILES
L2O VAL VAL ASP B:1;
 Valid;
 none;
 submit data
473.547 n/a O=C([...
ZN A:1001;
A:1002;
 Part of Protein;
Part of Protein;
 none;
none;
 submit data
65.409 Zn [Zn+2...
View in 3D viewer
90% Homology Family
Leader
PDB id Resolution Class Description Source Keywords
1Y0Y 1.6 Å EC: 3.-.-.- CRYSTAL STRUCTURE OF TETRAHEDRAL AMINOPEPTIDASE FROM P. HORI COMPLEX WITH AMASTATIN PYROCOCCUS HORIKOSHII AMINOPEPTIDASE PDZ HYDROLASE-HYDROLASE INHIBITOR COMPLEX
Ref.: CRYSTAL STRUCTURE OF TET PROTEASE REVEALS COMPLEMEN PROTEIN DEGRADATION PATHWAYS IN PROKARYOTES J.MOL.BIOL. V. 346 1207 2005
Members (1)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 312 families.
1 1Y0Y - L2O VAL VAL ASP n/a n/a
70% Homology Family (1)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 261 families.
1 1Y0Y - L2O VAL VAL ASP n/a n/a
50% Homology Family (1)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 214 families.
1 1Y0Y - L2O VAL VAL ASP n/a n/a
Polypharmacology
Similar Ligands (2D)
Ligand no: 1; Ligand: L2O VAL VAL ASP; Similar ligands found: 1
No: Ligand ECFP6 Tc MDL keys Tc
1 L2O VAL VAL ASP 1 1
Similar Ligands (3D)
Ligand no: 1; Ligand: L2O VAL VAL ASP; Similar ligands found: 0
No: Ligand Similarity coefficient
Similar Binding Sites (Proteins are less than 50% similar to leader)
Pocket No.: 1; Query (leader) PDB : 1Y0Y; Ligand: L2O VAL VAL ASP; Similar sites found with APoc: 1
This union binding pocket(no: 1) in the query (biounit: 1y0y.bio1) has 17 residues
No: Leader PDB Ligand Sequence Similarity
1 4DYO SD4 13.0312
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