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Receptor
PDB id Resolution Class Description Source Keywords
1VL0 2.05 Å EC: 1.-.-.- CRYSTAL STRUCTURE OF A DTDP-4-DEHYDRORHAMNOSE REDUCTASE, RFB (CA_C2315) FROM CLOSTRIDIUM ACETOBUTYLICUM ATCC 824 AT 2.05R ESOLUTION CLOSTRIDIUM ACETOBUTYLICUM DTDP-4-DEHYDRORHAMNOSE REDUCTASE RFBD ORTHOLOG STRUCTURAL JOINT CENTER FOR STRUCTURAL GENOMICS JCSG PROTEIN STRUCTUINITIATIVE PSI OXIDOREDUCTASE
Ref.: CRYSTAL STRUCTURE OF DTDP-4-DEHYDRORHAMNOSE REDUCTA ORTHOLOG (CAC2315) FROM CLOSTRIDIUM ACETOBUTYLICUM RESOLUTION TO BE PUBLISHED
Ligand
Ligand Chain:Residue Validity Ligand Warnings Binding Data NGL Viewer Molecular Weight (Da) Formula SMILES
NAI A:300;
B:300;
C:300;
Valid;
Valid;
Valid;
none;
none;
none;
submit data
665.441 C21 H29 N7 O14 P2 c1nc(...
UNL A:301;
Invalid;
none;
submit data
n/a NULL NULL
View in 3D viewer
90% Homology Family
Leader
PDB id Resolution Class Description Source Keywords
1VL0 2.05 Å EC: 1.-.-.- CRYSTAL STRUCTURE OF A DTDP-4-DEHYDRORHAMNOSE REDUCTASE, RFB (CA_C2315) FROM CLOSTRIDIUM ACETOBUTYLICUM ATCC 824 AT 2.05R ESOLUTION CLOSTRIDIUM ACETOBUTYLICUM DTDP-4-DEHYDRORHAMNOSE REDUCTASE RFBD ORTHOLOG STRUCTURAL JOINT CENTER FOR STRUCTURAL GENOMICS JCSG PROTEIN STRUCTUINITIATIVE PSI OXIDOREDUCTASE
Ref.: CRYSTAL STRUCTURE OF DTDP-4-DEHYDRORHAMNOSE REDUCTA ORTHOLOG (CAC2315) FROM CLOSTRIDIUM ACETOBUTYLICUM RESOLUTION TO BE PUBLISHED
Members (1)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 318 families.
1 1VL0 - NAI C21 H29 N7 O14 P2 c1nc(c2c(n....
70% Homology Family (1)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 280 families.
1 1VL0 - NAI C21 H29 N7 O14 P2 c1nc(c2c(n....
50% Homology Family (1)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 187 families.
1 1VL0 - NAI C21 H29 N7 O14 P2 c1nc(c2c(n....
Polypharmacology
Similar Ligands
Ligand no: 1; Ligand: NAI; Similar ligands found: 262
No: Ligand ECFP6 Tc MDL keys Tc
1 NAI 1 1
2 0WD 0.814815 0.986842
3 NDP 0.803738 0.986842
4 AP0 0.743119 0.961039
5 NMN AMP PO4 0.704348 0.960526
6 NAX 0.663717 0.961538
7 A2D 0.659574 0.933333
8 80F 0.65 0.925926
9 6V0 0.649123 0.986842
10 TXE 0.62931 0.948052
11 BA3 0.628866 0.933333
12 AP5 0.622449 0.933333
13 B4P 0.622449 0.933333
14 TXD 0.62069 0.923077
15 AR6 0.613861 0.907895
16 APR 0.613861 0.907895
17 EAD 0.609375 0.961538
18 SAP 0.607843 0.8625
19 AGS 0.607843 0.8625
20 ADP 0.606061 0.907895
21 HEJ 0.60396 0.907895
22 50T 0.60396 0.871795
23 ATP 0.60396 0.907895
24 AN2 0.6 0.896104
25 AT4 0.6 0.873418
26 A22 0.598131 0.921053
27 AQP 0.598039 0.907895
28 5FA 0.598039 0.907895
29 M33 0.594059 0.896104
30 CA0 0.594059 0.909091
31 AD9 0.592233 0.884615
32 NAJ PZO 0.592 0.935897
33 P1H 0.590909 0.9375
34 ACP 0.588235 0.884615
35 4AD 0.587156 0.886076
36 A1R 0.587156 0.851852
37 PRX 0.582524 0.8375
38 ANP 0.580952 0.884615
39 3OD 0.580357 0.909091
40 SRP 0.579439 0.873418
41 ADX 0.578431 0.821429
42 OAD 0.576577 0.909091
43 5AL 0.575472 0.896104
44 NAJ PYZ 0.573643 0.890244
45 A3R 0.572727 0.851852
46 ADJ 0.569106 0.890244
47 UP5 0.566667 0.960526
48 ACQ 0.566038 0.884615
49 9X8 0.5625 0.8625
50 A 0.561224 0.881579
51 AMP 0.561224 0.881579
52 ATF 0.555556 0.873418
53 6YZ 0.550459 0.884615
54 8QN 0.54955 0.896104
55 25L 0.547826 0.921053
56 4TC 0.544715 0.935897
57 AMO 0.544643 0.897436
58 PAJ 0.544643 0.853659
59 ADQ 0.544643 0.909091
60 ABM 0.544554 0.858974
61 NPW 0.544 0.949367
62 WAQ 0.54386 0.851852
63 LAD 0.54386 0.831325
64 PR8 0.54386 0.821429
65 DQV 0.541667 0.946667
66 DG1 0.541353 0.986842
67 1DG 0.541353 0.986842
68 00A 0.539823 0.875
69 NZQ 0.539683 0.974026
70 BIS 0.53913 0.851852
71 1ZZ 0.53913 0.811765
72 APC 0.537736 0.873418
73 OMR 0.536585 0.823529
74 OOB 0.535714 0.921053
75 25A 0.535714 0.907895
76 5SV 0.535714 0.797619
77 3UK 0.535088 0.909091
78 A12 0.533981 0.873418
79 AP2 0.533981 0.873418
80 B5V 0.530435 0.897436
81 DND 0.528455 0.922078
82 NXX 0.528455 0.922078
83 CNA 0.527559 0.922078
84 DLL 0.526316 0.921053
85 AHX 0.526316 0.864198
86 PTJ 0.525862 0.841463
87 ME8 0.525862 0.811765
88 FYA 0.525862 0.871795
89 NB8 0.525862 0.864198
90 B5M 0.525424 0.886076
91 YAP 0.525424 0.886076
92 SRA 0.524752 0.8375
93 SON 0.52381 0.873418
94 TAT 0.522936 0.873418
95 T99 0.522936 0.873418
96 ADP VO4 0.522523 0.871795
97 VO4 ADP 0.522523 0.871795
98 48N 0.520325 0.864198
99 YLP 0.520325 0.793103
100 YLB 0.52 0.793103
101 AU1 0.518868 0.884615
102 ADP PO3 0.518519 0.881579
103 9SN 0.516949 0.864198
104 DAL AMP 0.513274 0.871795
105 TXA 0.512821 0.897436
106 B5Y 0.512605 0.886076
107 FA5 0.512605 0.897436
108 GAP 0.509091 0.860759
109 9ZA 0.508772 0.851852
110 9ZD 0.508772 0.851852
111 4UU 0.508197 0.960526
112 YLC 0.507937 0.833333
113 T5A 0.507812 0.925926
114 RBY 0.504587 0.873418
115 ADV 0.504587 0.873418
116 TYR AMP 0.504132 0.8625
117 4UW 0.504 0.924051
118 TXP 0.503876 0.911392
119 ALF ADP 0.5 0.817073
120 G3A 0.5 0.8875
121 F2R 0.5 0.813953
122 TYM 0.5 0.897436
123 ADP ALF 0.5 0.817073
124 LAQ 0.5 0.811765
125 COD 0.496183 0.786517
126 139 0.496124 0.9125
127 YLA 0.496124 0.813953
128 G5P 0.495935 0.8875
129 AFH 0.495935 0.853659
130 XAH 0.495868 0.811765
131 BT5 0.492424 0.784091
132 AYB 0.492308 0.784091
133 A4P 0.492188 0.880952
134 GTA 0.491935 0.855422
135 4UV 0.491803 0.960526
136 A2R 0.491228 0.896104
137 MAP 0.486957 0.8625
138 NAD 0.484848 0.921053
139 XNP 0.484848 0.936709
140 UPA 0.484375 0.948052
141 7MD 0.483871 0.833333
142 ARG AMP 0.483871 0.781609
143 MYR AMP 0.483333 0.790698
144 NA7 0.483051 0.873418
145 YLY 0.477941 0.784091
146 ATR 0.477477 0.881579
147 AOC 0.47619 0.792208
148 ATP A A A 0.47541 0.894737
149 BTX 0.473684 0.793103
150 5AS 0.472222 0.736264
151 GA7 0.472 0.873418
152 LMS 0.471154 0.77907
153 NAQ 0.471014 0.864198
154 ADP BMA 0.470588 0.884615
155 N0B 0.467626 0.835294
156 A A 0.466667 0.883117
157 A3D 0.466667 0.909091
158 NJP 0.466165 0.910256
159 IOT 0.465649 0.784091
160 AF3 ADP 3PG 0.465116 0.809524
161 PAP 0.464286 0.894737
162 NAE 0.463768 0.886076
163 7MC 0.461538 0.813953
164 DZD 0.459259 0.876543
165 ZID 0.457143 0.909091
166 TAD 0.456693 0.853659
167 2A5 0.455357 0.8375
168 62F 0.453947 0.833333
169 AHZ 0.453125 0.790698
170 FB0 0.452055 0.76087
171 JB6 0.45082 0.851852
172 ITT 0.45045 0.857143
173 7D4 0.45045 0.825
174 LPA AMP 0.449612 0.790698
175 G5A 0.447368 0.755556
176 LEU LMS 0.446281 0.731183
177 M24 0.446043 0.843373
178 AVV 0.445378 0.841463
179 NDC 0.442177 0.864198
180 NSS 0.441667 0.775281
181 4TA 0.441176 0.890244
182 VMS 0.440678 0.764045
183 54H 0.440678 0.764045
184 7D3 0.440367 0.825
185 5CD 0.44 0.753247
186 PPS 0.439655 0.8
187 XYA 0.438776 0.789474
188 ADN 0.438776 0.789474
189 RAB 0.438776 0.789474
190 NDE 0.438356 0.897436
191 NVA LMS 0.438017 0.731183
192 AR6 AR6 0.4375 0.883117
193 TSB 0.436975 0.793103
194 53H 0.436975 0.755556
195 8X1 0.436975 0.731183
196 DTA 0.436893 0.759494
197 A2P 0.436364 0.868421
198 A3P 0.436364 0.881579
199 A5A 0.435897 0.781609
200 FNK 0.435065 0.840909
201 HFD 0.434783 0.8625
202 ODP 0.433824 0.924051
203 SFG 0.433628 0.725
204 Z5A 0.433566 0.858824
205 6FA 0.433333 0.835294
206 SSA 0.432203 0.775281
207 J7C 0.431193 0.702381
208 DTP 0.431034 0.825
209 P5A 0.430894 0.723404
210 AMP NAD 0.430657 0.896104
211 5N5 0.43 0.766234
212 DSZ 0.429752 0.775281
213 LSS 0.429752 0.73913
214 52H 0.428571 0.755556
215 SFD 0.427632 0.731959
216 9K8 0.427419 0.712766
217 6AD 0.42735 0.831325
218 EP4 0.427184 0.707317
219 FDA 0.426667 0.870588
220 ARU 0.42623 0.788235
221 6RE 0.425926 0.694118
222 A4D 0.425743 0.766234
223 5CA 0.425 0.775281
224 3DH 0.424528 0.725
225 AV2 0.423729 0.835443
226 AMP DBH 0.421875 0.860759
227 U A 0.421429 0.923077
228 DAT 0.421053 0.825
229 5X8 0.421053 0.7375
230 GSU 0.419355 0.755556
231 MTA 0.419048 0.725
232 3AT 0.418803 0.883117
233 ETB 0.41844 0.786517
234 DCA 0.41844 0.777778
235 FAD 0.418301 0.845238
236 FAS 0.418301 0.845238
237 A3N 0.418182 0.759494
238 F2N 0.417178 0.850575
239 7D5 0.415094 0.8
240 A U 0.414815 0.910256
241 YSA 0.414062 0.775281
242 0T1 0.412587 0.777778
243 A C A C 0.411348 0.8875
244 2AM 0.411215 0.857143
245 9JJ 0.409938 0.855422
246 M2T 0.409524 0.690476
247 KAA 0.408 0.731183
248 7C5 0.407692 0.790123
249 3AM 0.407407 0.844156
250 NAP 0.406897 0.909091
251 8PZ 0.40625 0.795455
252 PUA 0.405594 0.9
253 FAY 0.405063 0.855422
254 P5F 0.404908 0.83908
255 EEM 0.403361 0.670455
256 COA 0.402778 0.777778
257 RFL 0.402516 0.816092
258 GJV 0.401786 0.686047
259 SA8 0.401709 0.686047
260 U A C C 0.401408 0.898734
261 WSA 0.4 0.784091
262 G A A A 0.4 0.841463
Similar Binding Sites (Proteins are less than 50% similar to leader)
Pocket No.: 1; Query (leader) PDB : 1VL0; Ligand: NAI; Similar sites found with APoc: 759
This union binding pocket(no: 1) in the query (biounit: 1vl0.bio1) has 27 residues
No: Leader PDB Ligand Sequence Similarity
1 4ZFL 4NK None
2 5NA1 FAD 1.0274
3 1L5Y BEF 1.0274
4 5Y8L NAD 1.0274
5 2AQJ FAD 1.30112
6 2AQJ TRP 1.30112
7 3QJ4 FAD 1.36986
8 6A0S NDP 1.36986
9 6A0S HSE 1.36986
10 4ZCC FAD 1.4881
11 4ZCC NAI 1.4881
12 5KUT GDP 1.5873
13 2DTJ THR 1.68539
14 4PVD NDP 1.71233
15 3CIF G3H 1.71233
16 1LLU NAD 1.71233
17 5ZI2 NAD 1.71233
18 5EOW FAD 1.71233
19 3VPH OXM 1.71233
20 1V8B NAD 1.71233
21 3CIF NAD 1.71233
22 3VPH NAD 1.71233
23 3HQP FDP 1.71233
24 5ZI2 ADP 1.71233
25 1KNR FAD 1.71233
26 4BTV RB3 1.71233
27 4U8P FDA 1.71233
28 4U8P UDP 1.71233
29 3L4S NAD 1.71233
30 1P0F NAP 1.71233
31 3L4S 3PG 1.71233
32 3GF4 FAD 1.71233
33 3GF4 UPG 1.71233
34 1KYQ NAD 1.82482
35 1D7O NAD 2.05479
36 1D7O TCL 2.05479
37 4OOE FOM 2.05479
38 1E1M FAD 2.05479
39 1E1M NAP 2.05479
40 4OOE NDP 2.05479
41 4J36 FAD 2.05479
42 4J36 1HR 2.05479
43 5THY SAH 2.05479
44 2VHW NAI 2.05479
45 1ZK7 FAD 2.05479
46 5T96 79J 2.05479
47 1PL6 NAD 2.05479
48 4MP8 MLI 2.05479
49 4MP8 NAD 2.05479
50 1HYH NAD 2.05479
51 1PS9 FAD 2.05479
52 4L8V NAP 2.05479
53 1GR0 NAD 2.05479
54 5THZ SAH 2.05479
55 4TM3 FAD 2.05479
56 2ZXI FAD 2.05479
57 1PL6 572 2.05479
58 5EZ7 FAD 2.05479
59 2NAD NAD 2.05479
60 5OCQ CIT 2.10526
61 3FSY SCA 2.10843
62 2F1K NAP 2.15054
63 2PD4 DCN 2.18182
64 2PD4 NAD 2.18182
65 1DRV A3D 2.1978
66 1P77 ATR 2.20588
67 1U7Z PMT 2.21239
68 5T9F TYR 2.21402
69 5T9F NAP 2.21402
70 5T9E NAP 2.21402
71 4J4H 1J1 2.3166
72 4J4H NAI 2.3166
73 4JK3 NAD 2.3166
74 2VT3 ATP 2.32558
75 6EL3 NAP 2.39726
76 2Q2V NAD 2.39726
77 1RJW ETF 2.39726
78 1V6A TRE 2.39726
79 5XWV NDP 2.39726
80 5XWV 8H6 2.39726
81 2DKH FAD 2.39726
82 2DKH 3HB 2.39726
83 1H9A NAP 2.39726
84 3NJ4 AFX 2.39726
85 3NJ4 NAD 2.39726
86 6D6Y SAH 2.39726
87 3H9E NAD 2.39726
88 4R5M NAP 2.39726
89 2JHF NAD 2.39726
90 1UXG NAD 2.39726
91 1UXG FUM 2.39726
92 3OND NAD 2.39726
93 3OND ADN 2.39726
94 2VVM FAD 2.39726
95 1HKU NAD 2.39726
96 2YVF NAD 2.39726
97 2YVF FAD 2.39726
98 5YU3 PRO 2.39726
99 5YU3 NAD 2.39726
100 4R5M 4NO 2.39726
101 4YNU FAD 2.39726
102 5JE8 NAD 2.39726
103 4YNU LGC 2.39726
104 6FDF SAH 2.39726
105 5ZZ6 ADP 2.40385
106 5ZZ6 NAD 2.40385
107 3O03 NAP 2.4055
108 2VDV SAM 2.43902
109 4D42 NAP 2.48227
110 4D42 W0I 2.48227
111 5BSH PRO 2.52708
112 3LU1 NAD 2.73973
113 4PIV NDP 2.73973
114 1RM0 D6P 2.73973
115 1RM0 NAI 2.73973
116 1EZ4 NAD 2.73973
117 1O6Z NAD 2.73973
118 1COY FAD 2.73973
119 1COY AND 2.73973
120 1LDN NAD 2.73973
121 5X68 FAD 2.73973
122 2XVE FAD 2.73973
123 4B4U NAP 2.73973
124 2XVF FAD 2.73973
125 5JY6 NAD 2.73973
126 5TWB FAD 2.73973
127 2GV8 FAD 2.73973
128 5ERG SAM 2.73973
129 4EUE NAI 2.73973
130 3X0V FAD 2.73973
131 2GVC FAD 2.73973
132 5TS5 FAD 2.73973
133 5M67 3D1 2.73973
134 5M67 ADE 2.73973
135 1VQW FAD 2.73973
136 4OPC PGT 2.73973
137 5M67 NAD 2.73973
138 1O0S NAI 2.73973
139 5TC4 NAD 2.73973
140 1FEC FAD 2.73973
141 4OPC FDA 2.73973
142 4RPL 3UC 2.73973
143 4RPL FAD 2.73973
144 1X14 NAD 2.73973
145 5MUA GAL 2.7972
146 1WMA NDP 2.89855
147 1WMA AB3 2.89855
148 4D79 ATP 2.89855
149 3AY6 NAI 2.97398
150 3AY6 BGC 2.97398
151 3OIG NAD 3.00752
152 2XVM SAH 3.01508
153 6GAS FAD 3.02115
154 1I36 NAP 3.0303
155 1GEE NAD 3.06513
156 1NFQ NAI 3.07692
157 1EQ2 NAP 3.08219
158 2X6T NAP 3.08219
159 5B4T NAD 3.08219
160 5B4T 3HR 3.08219
161 5DF1 58X 3.08219
162 5DF1 NAP 3.08219
163 5JAQ NAI 3.08219
164 4AT0 FAD 3.08219
165 1GZ4 ATP 3.08219
166 3B1F NAD 3.08219
167 1YS4 NAP 3.08219
168 5MPT SAH 3.08219
169 1MUU NAD 3.08219
170 1QO8 FAD 3.08219
171 1E3I CXF 3.08219
172 1MV8 NAD 3.08219
173 3G5S FAD 3.08219
174 1YKJ PHB 3.08219
175 1YKJ FAD 3.08219
176 1GAD NAD 3.08219
177 4EMI NAD 3.08219
178 4MIG G3F 3.08219
179 3UCL FAD 3.08219
180 3UCL CYH 3.08219
181 4Z0H NAD 3.08219
182 4UP3 NDP 3.08219
183 3QVP FAD 3.08219
184 1REO FAD 3.08219
185 4D3F NAP 3.08219
186 1GPE FAD 3.08219
187 4UP3 FAD 3.08219
188 5GZ6 NDP 3.08219
189 3K7M FAD 3.08219
190 1TI7 NAP 3.08219
191 5HJM HSL 3.08219
192 2B4R AES 3.08219
193 2B4R NAD 3.08219
194 3OID NDP 3.10078
195 5N0J FAD 3.1339
196 2B4Q NAP 3.26087
197 1HDR NAD 3.27869
198 4JLS 3ZE 3.28947
199 2BKA NDP 3.30579
200 5MSO NAP 3.42466
201 4Q9N NAI 3.42466
202 2IZ1 ATR 3.42466
203 5A1T NAI 3.42466
204 5A1T OXM 3.42466
205 1U1I NAD 3.42466
206 2QRK AMP 3.42466
207 5JCA NDP 3.42466
208 5JCA FAD 3.42466
209 1NVM NAD 3.42466
210 4M52 FAD 3.42466
211 5KOX RFP 3.42466
212 5KOX FAD 3.42466
213 1GET NAP 3.42466
214 2IID PHE 3.42466
215 2IID FAD 3.42466
216 3IHG FAD 3.42466
217 1R37 NAD 3.42466
218 1GET FAD 3.42466
219 3HDY GDU 3.42466
220 1KYZ SAH 3.42466
221 3HDY FAD 3.42466
222 3HDY FDA 3.42466
223 1X1T NAD 3.46154
224 2AE2 PTO 3.46154
225 2AE2 NAP 3.46154
226 3GU3 SAH 3.52113
227 2DKN NAI 3.52941
228 2DUR MAN MAN 3.55731
229 4CNK FAD 3.58056
230 2WA2 SAM 3.62319
231 2HK9 ATR 3.63636
232 2HK9 NAP 3.63636
233 1AE1 NAP 3.663
234 4J1Q NDP 3.76712
235 4HXY NDP 3.76712
236 1ZBQ NAD 3.76712
237 3I6I NDP 3.76712
238 1SB8 NAD 3.76712
239 3HB5 NAP 3.76712
240 1SB8 UD2 3.76712
241 5NUF NAD 3.76712
242 3GGO NAI 3.76712
243 3GGO ENO 3.76712
244 5KKA 6V0 3.76712
245 5NUE NAD 3.76712
246 2PV7 NAD 3.76712
247 2QA1 FAD 3.76712
248 1JNR FAD 3.76712
249 4C3Y FAD 3.76712
250 5J5Z FAD 3.76712
251 1V35 NAI 3.76712
252 4JDR FAD 3.76712
253 3E1T FAD 3.76712
254 6AIN FAD 3.76712
255 5UAO FAD 3.76712
256 4DSG UDP 3.76712
257 4DSG FAD 3.76712
258 2I3G NAP 3.76712
259 1C0I BE2 3.76712
260 1C0I FAD 3.76712
261 5HSA FAS 3.76712
262 1VI2 NAD 3.76712
263 5DN9 NAD 3.76712
264 5H81 NAP 3.76712
265 3KLJ FAD 3.76712
266 1BZL FAD 3.76712
267 1BZL GCG 3.76712
268 4C3Y ANB 3.76712
269 2DFV NAD 3.76712
270 1A27 NAP 3.80623
271 1NPD NAD 3.81944
272 2UYQ SAM 3.87097
273 5N2I NAP 3.87931
274 2G5C NAD 3.91459
275 4QED NAP 4.03226
276 1C3M MAN MAN 4.08163
277 2BD0 NAP 4.09836
278 9LDT NAD 4.10959
279 9LDB NAD 4.10959
280 2J5V PCA 4.10959
281 1VKO NAD 4.10959
282 5TUF FAD 4.10959
283 5TUF TDC 4.10959
284 5UR0 NAD 4.10959
285 1V59 NAD 4.10959
286 1V59 FAD 4.10959
287 3AB1 FAD 4.10959
288 2ZJ1 NAD 4.10959
289 2ZJ1 ARJ 4.10959
290 5XNC MTA 4.10959
291 1GQ2 NAP 4.10959
292 3FPZ AHZ 4.10959
293 1J0X NAD 4.10959
294 5Z21 NAI 4.10959
295 1MO9 FAD 4.10959
296 1MO9 KPC 4.10959
297 5W7M SAH 4.10959
298 5GUD NDP 4.10959
299 2IVD FAD 4.10959
300 5GUD 2IT 4.10959
301 1ZEM NAD 4.19847
302 1ZQ9 SAM 4.21053
303 4YKG NAD 4.22265
304 1TL2 NDG 4.23729
305 1HDC CBO 4.33071
306 1Y1P NMN AMP PO4 4.45205
307 1GTE FAD 4.45205
308 4W6Z 8ID 4.45205
309 3WQQ NDP 4.45205
310 3WQQ IB3 4.45205
311 6CEP NAD 4.45205
312 1E5Q NDP 4.45205
313 5OC1 FAD 4.45205
314 6CEP OXM 4.45205
315 1I8T FAD 4.45205
316 4KP7 NAP 4.45205
317 1CER NAD 4.45205
318 4KP7 1UQ 4.45205
319 4HA6 FAD 4.45205
320 4UCI SAM 4.45205
321 3ZNN 4WL 4.45205
322 3ZNN FAD 4.45205
323 1YY5 FAD 4.45205
324 1RSG FAD 4.45205
325 3C1O NAP 4.45205
326 5CAE SIN 4.45205
327 5CAE COA 4.45205
328 1U3U BNF 4.45205
329 1U3U NAD 4.45205
330 5EES NAP 4.45344
331 3NYC FAD 4.46194
332 3NYC IAR 4.46194
333 5Z2L NDP 4.4898
334 4OHU 2TK 4.49827
335 4OHU NAD 4.49827
336 1LUA NAP 4.52962
337 1RP0 AHZ 4.57746
338 1E3W NAD 4.5977
339 2WYV NAD 4.5977
340 4KCT FDP 4.60922
341 1E6W NAD 4.61538
342 1F8G NAD 4.6875
343 2F5Z FAD 4.6875
344 2CDU ADP 4.79452
345 4D04 NAP 4.79452
346 4D04 FAD 4.79452
347 1LDM NAD 4.79452
348 2BRY FAD 4.79452
349 1NAA 6FA 4.79452
350 1NAA ABL 4.79452
351 1I2B USQ 4.79452
352 1I2B UPG 4.79452
353 1I2B NAD 4.79452
354 4TXI FAD 4.79452
355 1DJN ADP 4.79452
356 1O94 ADP 4.79452
357 2CDU FAD 4.79452
358 5U8U FAD 4.79452
359 3WGT QSC 4.79452
360 3WGT FAD 4.79452
361 3LAD FAD 4.79452
362 2O4C NAD 4.79452
363 1RYD NDP 4.79452
364 2GMH FAD 4.79452
365 2NU8 COA 4.79452
366 1H6C SIN 4.79452
367 2CFC NAD 4.8
368 1NNU NAD 4.80349
369 1NNU TCT 4.80349
370 1N5D NDP 4.86111
371 3AD8 FAD 4.92611
372 3AD8 PYC 4.92611
373 4FC7 COA 5.05415
374 4FC7 NAP 5.05415
375 3ICC NAP 5.09804
376 2F6U CIT 5.12821
377 5EJ2 NAD 5.13699
378 1GZ6 NAI 5.13699
379 5CG1 NAD BBN 5.13699
380 1T26 GBD 5.13699
381 1T26 NAI 5.13699
382 4AP3 FAD 5.13699
383 4AP3 NAP 5.13699
384 3OA2 NAD 5.13699
385 3AYI HCI 5.13699
386 3AYI FAD 5.13699
387 5JWC FAD 5.13699
388 1TB4 PEJ 5.13699
389 4MO2 FAD 5.13699
390 1NVT NAP 5.13699
391 4MO2 FDA 5.13699
392 4YCA NDP 5.13699
393 5N6C NAD 5.13699
394 3K5I AIR 5.13699
395 6F3M NAD 5.13699
396 4QTU SAM 5.18518
397 4J7U NAP 5.20833
398 4J7U YTZ 5.20833
399 4ZJS 4P0 5.21739
400 2GDZ NAD 5.24345
401 1TE2 PGA 5.30973
402 1OAA OAA 5.40541
403 3AXM 6PG 5.42636
404 3VZS NAP 5.47945
405 5E8J SAH 5.47945
406 5E9W SAH 5.47945
407 3H8V ATP 5.47945
408 2VTD LKM 5.47945
409 1DSS NAD 5.47945
410 1AJ8 COA 5.47945
411 4LWP SAH 5.47945
412 3OJO NAD 5.47945
413 2WPF WPF 5.47945
414 5BUK FAD 5.47945
415 2WPF FAD 5.47945
416 4R3U 5AD 5.47945
417 3VZS CAA 5.47945
418 5Z20 NAI 5.47945
419 1H2B NAJ 5.47945
420 2YVJ NAI 5.50459
421 2D2I NAP 5.52632
422 5D4V SAH 5.59701
423 1G0N PHH 5.65371
424 1G0N NDP 5.65371
425 5AOV NAP 5.65476
426 3ZV6 NAD 5.69395
427 3ZV6 4HB 5.69395
428 1QG6 NAD 5.74713
429 1QG6 TCL 5.74713
430 2ZAT NAP 5.76923
431 4ZVV NAD 5.82192
432 4ZVV GN0 5.82192
433 4G5H NAP 5.82192
434 5MIT FAD 5.82192
435 5MIT NAP 5.82192
436 4G5H UD7 5.82192
437 1WDK NAD 5.82192
438 3WBF NAP 5.82192
439 3V1Y NAD 5.82192
440 3S5W FAD 5.82192
441 3WBF API 5.82192
442 5TOW ADN 5.82192
443 5TOW NAI 5.82192
444 3TWO NDP 5.82192
445 3VSV XYS 5.82192
446 6BII NAP 5.82192
447 3CH6 NAP 5.94406
448 3CH6 311 5.94406
449 4KOA NDP 6.00601
450 4NEC SAH 6.06061
451 1KNM LAT 6.15385
452 4K26 NDP 6.15942
453 4K26 SFF 6.15942
454 5I7S NAD 6.15942
455 5I7S E9P 6.15942
456 2DT5 NAD 6.16114
457 1YXM ADE 6.16438
458 1Z6Z NAP 6.16438
459 5L4S NAP 6.16438
460 5L4S 6KX 6.16438
461 6AA8 NAD 6.16438
462 1PN0 FAD 6.16438
463 1PN0 IPH 6.16438
464 1D4D FAD 6.16438
465 5X9D 80F 6.16438
466 2Q7V FAD 6.16438
467 1HDG NAD 6.16438
468 6F97 FAD 6.16438
469 3B20 NAD 6.19469
470 2Q46 NAP 6.32411
471 4URF NAD 6.45161
472 5L53 NAP 6.50685
473 4U7W NDP 6.50685
474 2OOR NAD 6.50685
475 2Q1S NAI 6.50685
476 1SOW NAD 6.50685
477 1H82 GZZ 6.50685
478 1H82 FAD 6.50685
479 3GFB NAD 6.50685
480 4I5I 4I5 6.50685
481 5EB4 FAD 6.50685
482 4DPL NAP 6.50685
483 1SAY PYR 6.50685
484 1OMO NAD 6.50685
485 1C3V NDP 6.50685
486 2NPX NAD 6.50685
487 2NPX FAD 6.50685
488 1JAY NAP 6.60377
489 3RJ5 NAD 6.69291
490 3SJ7 NDP 6.74603
491 4CQM NAP 6.84932
492 4O1M NAD 6.84932
493 2C29 DQH 6.84932
494 2C29 NAP 6.84932
495 3ABI NAD 6.84932
496 2C7G FAD 6.84932
497 2C7G ODP 6.84932
498 4RSL FAD 6.84932
499 1LVL NAD 6.84932
500 2Y6Q FAD 6.84932
501 2Y6Q I7T 6.84932
502 1LVL FAD 6.84932
503 6ECU SAH 6.84932
504 1RYI GOA 6.84932
505 1RYI FAD 6.84932
506 1XSE NDP 7.11864
507 1LSS NAD 7.14286
508 1ZK4 NAP 7.17131
509 1ZK4 AC0 7.17131
510 3RKR NAP 7.19178
511 5MLR NAP 7.19178
512 1BW9 NAD 7.19178
513 5MLR GRQ 7.19178
514 5UAV NDP 7.19178
515 3LZW NAP 7.19178
516 3LZW FAD 7.19178
517 5UAV TFB 7.19178
518 5BRT CH9 7.19178
519 5BRT FAD 7.19178
520 3AB4 THR 7.19178
521 2RGJ FAD 7.19178
522 2Q0L FAD 7.19178
523 1DIG NAP 7.19178
524 3H5N ATP 7.19178
525 5KOK SAH 7.19178
526 2Q0L NAP 7.19178
527 2DTX BMA 7.19697
528 3NUG NAD 7.28745
529 5O42 NAD 7.29927
530 5O42 BGC 7.29927
531 5O42 9JW 7.29927
532 3WV8 ATP 7.33945
533 6ACS CIT 7.36434
534 3QWI NAP 7.40741
535 3QWI CUE 7.40741
536 4K6B GLU 7.45342
537 5L95 AMP 7.5
538 1LTH NAD 7.52351
539 1RKX NAD 7.53425
540 5LD5 NAD 7.53425
541 5BVA FAD 7.53425
542 4YSX FAD 7.53425
543 3GDN HBX 7.53425
544 3GDN FAD 7.53425
545 5JCM NAD 7.53425
546 5JCM FAD 7.53425
547 5JCM ISD 7.53425
548 6CI9 NAP 7.72201
549 6CI9 F3V 7.72201
550 1NYT NAP 7.74908
551 3D3W NAP 7.78689
552 1PR9 NAP 7.78689
553 5OOH NAP 7.87671
554 5OOH 9ZZ 7.87671
555 1GUZ NAD 7.87671
556 1GV0 NAD 7.87671
557 2E5V FAD 7.87671
558 5Y77 FAD 7.87671
559 5YB7 FAD 7.87671
560 5YB7 ORN 7.87671
561 2HQM FAD 7.87671
562 1J49 NAD 7.87671
563 2EV9 SKM 7.98479
564 2EV9 NAP 7.98479
565 2DC1 NAD 8.05085
566 3AFN NAP 8.13953
567 3L9W AMP 8.21918
568 5MDH NAD 8.21918
569 4MDH NAD 8.21918
570 5ZYN FAD 8.21918
571 3O9Z AKG 8.21918
572 3O9Z NAD 8.21918
573 5KMS NAD 8.21918
574 4LHD GLY 8.21918
575 5MZI FAD 8.21918
576 5MZI FYK 8.21918
577 2CVQ NDP 8.21918
578 5KMS FAD 8.21918
579 3O7W SAM 8.21918
580 1YJQ NAP 8.21918
581 4USR FAD 8.21918
582 1TZJ A3B 8.21918
583 3V1U NAD 8.56164
584 1A5Z NAD 8.56164
585 1Q0H NDP 8.56164
586 1Q0H FOM 8.56164
587 1Q9I FAD 8.56164
588 1Q9I TEO 8.56164
589 1F06 NDP 8.56164
590 1F06 2NP 8.56164
591 2W41 ADP 8.56164
592 5FA5 MTA 8.56164
593 1TDF NAP 8.56164
594 3H4V DVP 8.68056
595 3H4V NAP 8.68056
596 2A92 NAI 8.72274
597 4XQC 13D 8.90411
598 4XQC NAD 8.90411
599 3A06 NDP 8.90411
600 3A06 FOM 8.90411
601 5FJN BE2 8.90411
602 5FJN FAD 8.90411
603 2CDC XYP 8.90411
604 2CDC NAP 8.90411
605 6GAR FAD 8.90411
606 1KOL NAD 8.90411
607 2FZW NAD 8.90411
608 2CDC XYS 8.90411
609 1VL8 NAP 8.98876
610 3O26 NDP 9.00322
611 1TZD ADP 9.09091
612 1U7T NAD 9.1954
613 1U7T TDT 9.1954
614 2FR1 NDP 9.24658
615 5G3U ITW 9.24658
616 5WP5 SAH 9.24658
617 5G3U FDA 9.24658
618 2VUT NAD 9.30233
619 1UWK URO 9.58904
620 1UWK NAD 9.58904
621 5MBX FAD 9.58904
622 5MBX SP5 9.58904
623 5WP4 SAH 9.58904
624 5OVL NAP 9.93151
625 1PJS NAD 9.93151
626 1UP7 NAD 9.93151
627 2PT9 2MH 9.96885
628 1O5I NAD 10.0402
629 2RH4 EMO 10.1083
630 2EXX NAP 10.1307
631 1GEG NAD 10.1562
632 1E6E FAD 10.1562
633 4MOP 2H5 10.274
634 3CMC NAD 10.274
635 3KIH GDL 10.3093
636 1XKQ NDP 10.3571
637 3KIF GDL 10.3774
638 5C2N NAG 10.4167
639 1UZN NAP 10.5263
640 1W8D NAP 10.6164
641 1W73 NAP 10.6164
642 5I39 FAD 10.6164
643 1U8X NAD 10.6164
644 4FK7 P34 10.917
645 1W6U NAP 10.9589
646 1XHL NDP 10.9589
647 3HAD NAD 10.9589
648 5TUK FAD 11.3014
649 5OVK NDP 11.3281
650 1DLJ NAI 11.6438
651 6FP4 E1T 11.6438
652 1DLJ UGA 11.6438
653 4N49 SAM 11.6438
654 3G2O SAM 11.7057
655 1SQF SAM 11.9863
656 3B1J NAD 12
657 4GKV NAD 12.2024
658 1X7D ORN 12.3288
659 1X7D NAD 12.3288
660 1SC6 NAD 12.3288
661 6F9Q NAD 12.5
662 1WVG APR 12.6712
663 1Q7B NAP 12.7049
664 5TVI O8N 13.0435
665 1FK8 NAD 13.6187
666 3WXB NDP 13.6201
667 4BVA T3 13.6986
668 4BVA NDP 13.6986
669 5IN4 6CK 14.0411
670 5IN4 GDP 14.0411
671 5IN4 NAP 14.0411
672 4ZA2 NAD 14.0411
673 1PZG A3D 14.3836
674 2WSB NAD 14.5669
675 1WP4 NDP 14.8789
676 2WD7 NAP 15.0685
677 2GZ3 NAP 15.0685
678 2VZ0 NAP 15.0685
679 2VZ0 D64 15.0685
680 3JQ7 NAP 15.2778
681 3JQ8 NAP 15.2778
682 4CLO NAP 15.2778
683 3JQB NAP 15.2778
684 3JQA NAP 15.2778
685 3JQF NAP 15.2778
686 3BMO NAP 15.2778
687 4CME NAP 15.2778
688 4CM8 NAP 15.2778
689 3BMQ NAP 15.2778
690 4CM4 NAP 15.2778
691 3JQG NAP 15.2778
692 4CMI NAP 15.2778
693 3JQ9 NAP 15.2778
694 3BMN NAP 15.2778
695 4CLR NAP 15.2778
696 4CM9 NAP 15.2778
697 4TQG NDP 15.411
698 1GY8 NAD 15.411
699 3RNM FAD 15.5172
700 5ZEC NAP 15.7534
701 3QV1 NAD 15.8537
702 1HYE NAP 16.0959
703 5ODQ FAD 16.3043
704 1Z45 NAD 16.4384
705 2VYN NAD 16.4384
706 1ORR NAD 16.7808
707 3OJF NDP 16.7808
708 1OC2 TDX 16.7808
709 1OC2 NAD 16.7808
710 3OJF IMJ 16.7808
711 5YEC ATP 16.8067
712 2VVL FAD 17.4658
713 1FWV SGA MAG FUC 17.9104
714 4NBT NAD 18.75
715 5BJX NAD 18.8356
716 5BJX UDP 18.8356
717 1H5Q NAP 18.8679
718 3KO8 NAD 19.1781
719 1EK6 NAI 19.5205
720 1EK6 UPG 19.5205
721 6DNT NAD 19.5205
722 1VM6 NAD 19.7368
723 1RPN NDP 20.5479
724 1N7G GDR 20.5479
725 1N7G NDP 20.5479
726 5OJI NAP 20.7692
727 5OJI ISN 20.7692
728 2C5A NAD 21.2329
729 2C5A GDC 21.2329
730 1J5P NAD 21.3439
731 4GLL NAD 21.9178
732 6BWL NAD 21.9178
733 5K4W NAI 22.2603
734 5K4W THR 22.2603
735 1R6D DAU 22.2603
736 1UDB NAD 22.2603
737 1UDB UFG 22.2603
738 1R6D NAD 22.2603
739 2YY7 NAD 22.6027
740 1BXK NAD 22.9452
741 3A4V NAD 22.9452
742 3A4V PYR 22.9452
743 1KEW TYD 22.9452
744 1KEW NAD 22.9452
745 3ORF NAD 23.1076
746 2PZM NAD 23.2877
747 2PZM UDP 23.2877
748 2GN4 UD1 24.3151
749 2GN4 NDP 24.3151
750 4ZRN NAD 24.6575
751 4ZRN UPG 24.6575
752 5Y1G NAD 25.6849
753 5Y1G AKB 25.6849
754 1E7S NAP 25.6849
755 2HMT NAI 26.3889
756 3RFV NAI 28.839
757 3RFV 15L 28.839
758 1EJ0 SAM 32.2222
759 2Q1W NAD 33.9041
Pocket No.: 2; Query (leader) PDB : 1VL0; Ligand: NAI; Similar sites found with APoc: 9
This union binding pocket(no: 2) in the query (biounit: 1vl0.bio1) has 27 residues
No: Leader PDB Ligand Sequence Similarity
1 3JUC PCA None
2 43CA NPO None
3 2W68 SIA GAL BGC 3.07692
4 5A04 BGC 3.08219
5 5A04 NDP 3.08219
6 3A4T SFG 4.37956
7 1JAY F42 6.60377
8 1XXR MAN 8.07453
9 6D5J FV4 28.7425
Pocket No.: 3; Query (leader) PDB : 1VL0; Ligand: NAI; Similar sites found with APoc: 119
This union binding pocket(no: 3) in the query (biounit: 1vl0.bio1) has 27 residues
No: Leader PDB Ligand Sequence Similarity
1 2NUO BGC None
2 2HYQ MAN MAN None
3 2NU5 NAG None
4 5Y8L HUI 1.0274
5 3KB6 NAD 1.71233
6 1LC3 NAD 2.05479
7 4RQU NAD 2.05479
8 2P41 SAH 2.05479
9 5A96 GTP 2.05479
10 3EVG SAH 2.18182
11 1ZDQ MSM 2.39726
12 4JBI NDP 2.39726
13 3LL5 IP8 2.40964
14 1G8S MET 2.6087
15 5WGR FAD 2.73973
16 4IV9 FAD 2.73973
17 3BAZ NAP 2.73973
18 4XYB NDP 2.73973
19 4JNA FAD 2.73973
20 6BXO SAH 2.73973
21 4RDH AMP 2.77778
22 1SGJ OAA 2.8169
23 3ITJ CIT 3.08219
24 3UCL NAP 3.08219
25 4EMI FAD 3.08219
26 2NVK FAD 3.08219
27 1X87 NAD 3.08219
28 5JJR SAH 3.08219
29 4IDC NDP 3.08219
30 4IDC 1XX 3.08219
31 3ITJ FAD 3.08219
32 5W7B MYR 3.08219
33 1ZGS XMM 3.08219
34 1Z0N BCD 3.125
35 2DBZ NAP 3.42466
36 4M52 M52 3.42466
37 2R4J 13P 3.42466
38 2R4J FAD 3.42466
39 4RPM HXC 3.44828
40 1VDC FAD 3.76712
41 1CDO NAD 3.76712
42 3NT6 FAD 4.10959
43 2A8X FAD 4.10959
44 4A0S NAP 4.10959
45 3NTD FAD 4.10959
46 3NTA FAD 4.10959
47 4XDY NAI 4.14201
48 4YKG FAD 4.22265
49 2B5W NAP 4.45205
50 3OZ2 FAD 4.79452
51 3WLE NAD 4.79452
52 1H6C NDP 4.79452
53 5DOZ NDP 4.79452
54 3AD8 NAD 4.92611
55 4BJZ P3A 5.13699
56 4BJZ FAD 5.13699
57 6F3N ADN 5.13699
58 6F3N NAD 5.13699
59 1CF2 NAP 5.13699
60 5X20 NAD 5.13699
61 1RM4 NDP 5.13699
62 5EW9 5VC 5.16605
63 5FI3 NAP 5.32213
64 2JB2 PHE 5.47945
65 2JB2 FAD 5.47945
66 3NKS FAD 5.47945
67 3QFA FAD 5.47945
68 4REP FAD 5.47945
69 1EBF NAD 5.47945
70 4CJX NAP 5.47945
71 5ZBC FAD 5.54324
72 1KSK URA 5.55556
73 4EIP FAD 5.82192
74 3S5W NAP 5.82192
75 4EIP K2C 5.82192
76 3F8D FAD 5.82192
77 4G2R H1L 6.16438
78 2OBF SAH 6.22837
79 2OBF F83 6.22837
80 3ULK NDP 6.50685
81 5U7W ADE 6.50685
82 5AYV NAP 6.50685
83 5AYV KPL 6.50685
84 4YEE 4CQ 6.66667
85 3GCZ SAM 6.73759
86 2YG3 FAD 6.84932
87 1KJ8 GAR 6.84932
88 5W3K 9TY 6.84932
89 5W3K NDP 6.84932
90 2YLN CYS 7.06714
91 1FL2 FAD 7.09677
92 5O9F NAD 7.10227
93 5O9F 9ON 7.10227
94 3SQP FAD 7.19178
95 3L6C MLI 7.19178
96 1C1X NAD 7.19178
97 4XFR CIT 7.53425
98 3HNC TTP 7.53425
99 1UY4 XYP XYP XYP XYP 8.27586
100 1TDF FAD 8.56164
101 3LKZ SFG 8.56164
102 4FXQ G9L 8.56164
103 4EDF UPG 8.90411
104 4USQ FAD 8.90411
105 4EMJ FAD 9.34579
106 4U00 ADP 9.42623
107 2GSD NAD 9.58904
108 4J56 FAD 9.64912
109 1GNY XYP XYP XYP XYP XYP 9.80392
110 1D1T NAD 9.93151
111 2IXB A2G 10.274
112 2IXB NAD 10.274
113 1G60 SAM 10.3846
114 6FP4 FAD 11.6438
115 2CVZ NDP 11.7647
116 1YQZ FAD 11.9863
117 4NTC FAD 15.7534
118 5FII PHE 17.6471
119 5EIN NAP 22.2222
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