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Receptor
PDB id Resolution Class Description Source Keywords
1VKJ 2.5 Å EC: 2.8.2.23 CRYSTAL STRUCTURE OF HEPARAN SULFATE 3-O-SULFOTRANSFERASE IS THE PRESENCE OF PAP MUS MUSCULUS SULFOTRANSFERASE HEPARAN SULFATE PAP PAPSS TRANSFERASE
Ref.: CRYSTAL STRUCTURE AND MUTATIONAL ANALYSIS OF HEPARA 3-O-SULFOTRANSFERASE ISOFORM 1 J.BIOL.CHEM. V. 279 25789 2004
Ligand
Ligand Chain:Residue Validity Ligand Warnings Binding Data NGL Viewer Molecular Weight (Da) Formula SMILES
A3P A:602;
A:603;
A:604;
Valid;
Valid;
Valid;
none;
none;
none;
Kd = 14 uM
427.201 C10 H15 N5 O10 P2 c1nc(...
SO4 A:601;
B:602;
Invalid;
Invalid;
none;
none;
submit data
96.063 O4 S [O-]S...
View in 3D viewer
90% Homology Family
Leader
PDB id Resolution Class Description Source Keywords
1VKJ 2.5 Å EC: 2.8.2.23 CRYSTAL STRUCTURE OF HEPARAN SULFATE 3-O-SULFOTRANSFERASE IS THE PRESENCE OF PAP MUS MUSCULUS SULFOTRANSFERASE HEPARAN SULFATE PAP PAPSS TRANSFERASE
Ref.: CRYSTAL STRUCTURE AND MUTATIONAL ANALYSIS OF HEPARA 3-O-SULFOTRANSFERASE ISOFORM 1 J.BIOL.CHEM. V. 279 25789 2004
Members (2)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 3 families.
1 3UAN - NGY BDP SGN IDS SGN BDP n/a n/a
2 1VKJ Kd = 14 uM A3P C10 H15 N5 O10 P2 c1nc(c2c(n....
70% Homology Family (2)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 2 families.
1 3BD9 - A3P C10 H15 N5 O10 P2 c1nc(c2c(n....
2 1VKJ Kd = 14 uM A3P C10 H15 N5 O10 P2 c1nc(c2c(n....
50% Homology Family (6)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 187 families.
1 1ZRH - A3P C10 H15 N5 O10 P2 c1nc(c2c(n....
2 1T8T - A3P C10 H15 N5 O10 P2 c1nc(c2c(n....
3 1T8U - UAP SGN IDS SGN n/a n/a
4 3BD9 - A3P C10 H15 N5 O10 P2 c1nc(c2c(n....
5 3UAN - NGY BDP SGN IDS SGN BDP n/a n/a
6 1VKJ Kd = 14 uM A3P C10 H15 N5 O10 P2 c1nc(c2c(n....
Polypharmacology
Similar Ligands
Ligand no: 1; Ligand: A3P; Similar ligands found: 402
No: Ligand ECFP6 Tc MDL keys Tc
1 A3P 1 1
2 PAP 0.835616 0.985507
3 PPS 0.802632 0.871795
4 3AM 0.794118 0.956522
5 AMP 0.684932 0.971014
6 A 0.684932 0.971014
7 A2P 0.684211 0.985294
8 7D5 0.666667 0.902778
9 2AM 0.635135 0.942857
10 A A A 0.611111 0.90411
11 ATR 0.595238 0.971014
12 ABM 0.594937 0.916667
13 A2D 0.594937 0.943662
14 ADP 0.592593 0.971429
15 SRA 0.589744 0.917808
16 A A 0.586957 0.943662
17 ADN 0.585714 0.816901
18 RAB 0.585714 0.816901
19 XYA 0.585714 0.816901
20 AN2 0.585366 0.957747
21 A22 0.58427 0.957747
22 PUA 0.583333 0.883117
23 0WD 0.580952 0.894737
24 AP2 0.580247 0.931507
25 BA3 0.580247 0.943662
26 A12 0.580247 0.931507
27 ATP A A A 0.578947 0.929577
28 25A 0.577778 0.971429
29 SAP 0.576471 0.918919
30 AGS 0.576471 0.918919
31 AP5 0.573171 0.943662
32 B4P 0.573171 0.943662
33 ATP 0.571429 0.971429
34 HEJ 0.571429 0.971429
35 OVE 0.56962 0.90411
36 7D3 0.567901 0.90411
37 AT4 0.566265 0.931507
38 AQP 0.564706 0.971429
39 2A5 0.564706 0.917808
40 APC 0.564706 0.931507
41 5FA 0.564706 0.971429
42 V3L 0.563218 0.971429
43 APU 0.563107 0.918919
44 PAX 0.5625 0.85
45 DCA 0.559633 0.8
46 ETB 0.559633 0.809524
47 CA0 0.559524 0.917808
48 AU1 0.559524 0.944444
49 M33 0.559524 0.930556
50 ADX 0.559524 0.848101
51 A2R 0.555556 0.957747
52 ACP 0.552941 0.944444
53 50T 0.552941 0.930556
54 COA 0.54955 0.8
55 0T1 0.54955 0.8
56 AR6 0.546512 0.943662
57 PRX 0.546512 0.891892
58 APR 0.546512 0.943662
59 ACQ 0.545455 0.944444
60 TAT 0.545455 0.931507
61 T99 0.545455 0.931507
62 DA 0.54321 0.902778
63 D5M 0.54321 0.902778
64 7D4 0.541176 0.90411
65 AD9 0.54023 0.944444
66 ADV 0.54023 0.905405
67 RBY 0.54023 0.905405
68 ADQ 0.537634 0.917808
69 30N 0.535088 0.731183
70 COS 0.535088 0.781609
71 CAO 0.535088 0.772727
72 AMX 0.535088 0.809524
73 CMX 0.530435 0.8
74 SCO 0.530435 0.8
75 SON 0.529412 0.931507
76 ANP 0.52809 0.944444
77 GAP 0.52809 0.891892
78 7D7 0.527778 0.763889
79 6YZ 0.527473 0.944444
80 5N5 0.527027 0.791667
81 OOB 0.526882 0.930556
82 NA7 0.526316 0.931507
83 ACO 0.525862 0.772727
84 FCX 0.525862 0.772727
85 FAM 0.525862 0.781609
86 ADP PO3 0.522727 0.942857
87 5AL 0.522222 0.930556
88 HAX 0.521368 0.781609
89 5CD 0.52 0.802817
90 A4D 0.52 0.791667
91 LMS 0.518519 0.825
92 3KK 0.516949 0.781609
93 FYN 0.516949 0.8
94 ATF 0.516484 0.931507
95 00A 0.515789 0.881579
96 DLL 0.515789 0.930556
97 DTA 0.512821 0.783784
98 SOP 0.512605 0.781609
99 OXK 0.512605 0.781609
100 CA6 0.512605 0.708333
101 COK 0.512605 0.781609
102 MCD 0.512605 0.781609
103 VO4 ADP 0.51087 0.930556
104 ADP VO4 0.51087 0.930556
105 SRP 0.51087 0.905405
106 9ZD 0.510638 0.906667
107 9ZA 0.510638 0.906667
108 ADP BMA 0.510417 0.891892
109 25L 0.510204 0.957747
110 G A A A 0.509091 0.87013
111 A C A C 0.508929 0.846154
112 1VU 0.508333 0.772727
113 NMX 0.508333 0.73913
114 CO6 0.508333 0.781609
115 CMC 0.508333 0.781609
116 MTA 0.506329 0.77027
117 A3G 0.506024 0.773333
118 PAJ 0.505263 0.858974
119 A U 0.504673 0.868421
120 2MC 0.504132 0.747253
121 CAJ 0.504132 0.781609
122 SCD 0.504132 0.8
123 EP4 0.5 0.75
124 3OD 0.5 0.917808
125 BCO 0.5 0.781609
126 IVC 0.5 0.790698
127 ADP ALF 0.5 0.868421
128 A1S 0.5 0.781609
129 ALF ADP 0.5 0.868421
130 3HC 0.5 0.790698
131 MLC 0.5 0.781609
132 FYA 0.5 0.90411
133 1HE 0.5 0.764045
134 PTJ 0.5 0.894737
135 MAP 0.5 0.918919
136 COO 0.495935 0.781609
137 MCA 0.495935 0.772727
138 CAA 0.495935 0.790698
139 YE1 0.495935 0.790698
140 U A C C 0.495575 0.857143
141 A G 0.495495 0.881579
142 3UK 0.494845 0.917808
143 9X8 0.494845 0.893333
144 OAD 0.494845 0.917808
145 5SV 0.494737 0.846154
146 8QN 0.494737 0.930556
147 101 0.493976 0.902778
148 6RE 0.493976 0.75641
149 3DH 0.493827 0.77027
150 M2T 0.493671 0.730769
151 5AD 0.493151 0.742857
152 MC4 0.491935 0.73913
153 SCA 0.491935 0.781609
154 2CP 0.491935 0.772727
155 U A G G 0.491071 0.881579
156 WAQ 0.489796 0.881579
157 B5V 0.489796 0.905405
158 4AD 0.489583 0.893333
159 AMO 0.489583 0.905405
160 A3R 0.489583 0.881579
161 A1R 0.489583 0.881579
162 AOC 0.488095 0.819444
163 COW 0.488 0.772727
164 CA8 0.488 0.708333
165 3CP 0.488 0.781609
166 HGG 0.488 0.781609
167 2KQ 0.488 0.764045
168 COF 0.488 0.764045
169 BYC 0.488 0.781609
170 IRC 0.488 0.790698
171 1GZ 0.488 0.772727
172 Y3J 0.486842 0.722222
173 B5Y 0.485149 0.893333
174 FA5 0.485149 0.905405
175 1ZZ 0.484848 0.8375
176 AHX 0.484536 0.87013
177 DAL AMP 0.484211 0.90411
178 4CA 0.484127 0.772727
179 FAQ 0.484127 0.781609
180 BCA 0.484127 0.772727
181 AV2 0.483871 0.916667
182 DAT 0.483146 0.90411
183 5X8 0.483146 0.76
184 5AS 0.482759 0.776471
185 APC G U 0.482456 0.857143
186 ANZ 0.480769 0.820513
187 3AD 0.480519 0.828571
188 GRA 0.480315 0.781609
189 HXC 0.480315 0.764045
190 3AT 0.478261 0.971429
191 A3S 0.477273 0.783784
192 TGC 0.476562 0.772727
193 9SN 0.475248 0.87013
194 LAD 0.474747 0.858974
195 PR8 0.474747 0.848101
196 S0N 0.472868 0.781609
197 2NE 0.472868 0.764045
198 CIC 0.472868 0.781609
199 CCQ 0.472868 0.747253
200 1CZ 0.472868 0.772727
201 CO8 0.472868 0.764045
202 A5D 0.472527 0.783784
203 DSH 0.470588 0.721519
204 YAP 0.470588 0.893333
205 B5M 0.470588 0.893333
206 NB8 0.47 0.87013
207 TXA 0.47 0.905405
208 ME8 0.47 0.8375
209 BIS 0.47 0.906667
210 0FQ 0.469231 0.781609
211 4CO 0.469231 0.772727
212 DCC 0.469231 0.764045
213 UCC 0.469231 0.764045
214 MYA 0.469231 0.764045
215 MFK 0.469231 0.764045
216 5F9 0.469231 0.764045
217 ST9 0.469231 0.764045
218 A3T 0.466667 0.794521
219 U A A U 0.466667 0.906667
220 01A 0.465649 0.747253
221 0ET 0.465649 0.764045
222 TM1 0.465347 0.792683
223 AS 0.465116 0.855263
224 IMO 0.465116 0.928571
225 J7C 0.465116 0.766234
226 PO4 PO4 A A A A PO4 0.464646 0.928571
227 ZAS 0.464286 0.763158
228 DTP 0.462366 0.90411
229 DQV 0.462264 0.930556
230 CS8 0.462121 0.755556
231 WCA 0.462121 0.764045
232 1CV 0.462121 0.781609
233 4UV 0.461538 0.893333
234 NJP 0.460177 0.918919
235 S4M 0.45977 0.662791
236 HDC 0.458647 0.764045
237 NHW 0.458647 0.764045
238 4KX 0.458647 0.755556
239 NHM 0.458647 0.764045
240 UOQ 0.458647 0.764045
241 LAQ 0.457944 0.8375
242 JB6 0.455446 0.881579
243 NPW 0.455357 0.860759
244 NDP 0.455357 0.894737
245 HFQ 0.455224 0.764045
246 MRR 0.455224 0.764045
247 MRS 0.455224 0.764045
248 MAO 0.454545 0.756098
249 UPA 0.454545 0.881579
250 GGZ 0.453608 0.822785
251 NEC 0.453488 0.72
252 4UU 0.45283 0.893333
253 AFH 0.45283 0.858974
254 NHQ 0.452555 0.790698
255 XAH 0.451923 0.8375
256 YNC 0.451852 0.772727
257 DAK 0.451852 0.755556
258 G5A 0.451613 0.776471
259 SAH 0.451613 0.74026
260 MYR AMP 0.45098 0.814815
261 SFG 0.450549 0.746667
262 2VA 0.450549 0.773333
263 4UW 0.449541 0.858974
264 8Z2 0.448529 0.755556
265 A3N 0.448276 0.76
266 A U C C 0.448 0.846154
267 V1N 0.447619 0.916667
268 AMP DBH 0.447619 0.866667
269 TYR AMP 0.447619 0.868421
270 103 0.447059 0.861111
271 ACK 0.447059 0.885714
272 QQY 0.447059 0.837838
273 3NZ 0.445545 0.75641
274 TYM 0.445455 0.905405
275 A G U 0.445312 0.8375
276 A7D 0.444444 0.773333
277 XNP 0.443478 0.871795
278 G3A 0.443396 0.894737
279 GJV 0.443182 0.746835
280 9K8 0.441176 0.711111
281 SA8 0.44086 0.703704
282 NVA 2AD 0.44086 0.734177
283 YLP 0.440367 0.817073
284 48N 0.440367 0.87013
285 WMP 0.439655 0.864865
286 AR6 AR6 0.439252 0.916667
287 G5P 0.439252 0.894737
288 GA7 0.439252 0.88
289 D3Y 0.438776 0.763158
290 G3D 0.438776 0.905405
291 TSB 0.438776 0.795181
292 NZQ 0.438596 0.883117
293 TXP 0.438596 0.894737
294 ZZB 0.438596 0.792683
295 A5A 0.4375 0.804878
296 DND 0.436364 0.905405
297 NXX 0.436364 0.905405
298 NAX 0.436364 0.848101
299 NAI 0.436364 0.881579
300 UP5 0.436364 0.893333
301 VRT 0.43617 0.74359
302 SO8 0.43617 0.763158
303 SAI 0.43617 0.730769
304 1HA 0.435714 0.764045
305 A6D 0.435644 0.719512
306 QQX 0.435294 0.826667
307 GTA 0.435185 0.860759
308 TAD 0.435185 0.858974
309 ODP 0.434783 0.883117
310 SSA 0.43299 0.776471
311 SMM 0.43299 0.682353
312 01K 0.432624 0.781609
313 OMR 0.432432 0.82716
314 DDS 0.431579 0.876712
315 139 0.429825 0.848101
316 COT 0.429577 0.781609
317 F8G 0.429577 0.731183
318 A G U U 0.428571 0.8375
319 54H 0.428571 0.785714
320 52H 0.428571 0.776471
321 CC5 0.428571 0.814286
322 AP0 0.428571 0.87013
323 4TC 0.428571 0.87013
324 VMS 0.428571 0.785714
325 DZD 0.42735 0.858974
326 LPA AMP 0.427273 0.814815
327 EEM 0.427083 0.686747
328 AAT 0.427083 0.703704
329 ARG AMP 0.425926 0.82716
330 7MD 0.425926 0.8375
331 3L1 0.425 0.77027
332 3D1 0.425 0.77027
333 53H 0.424242 0.776471
334 5CA 0.424242 0.776471
335 8X1 0.424242 0.75
336 MHZ 0.423913 0.694118
337 CA3 0.423611 0.781609
338 TXD 0.423423 0.881579
339 6V0 0.423423 0.87013
340 1DG 0.422764 0.894737
341 DG1 0.422764 0.894737
342 TAP 0.422764 0.906667
343 38Y 0.422414 0.804878
344 IOT 0.421053 0.829268
345 U A 0.420168 0.906667
346 TXE 0.419643 0.881579
347 S7M 0.418367 0.686747
348 AHZ 0.418182 0.814815
349 P5A 0.417476 0.741573
350 T5A 0.417391 0.817073
351 SAM 0.416667 0.686747
352 YLC 0.415929 0.8375
353 YLB 0.415929 0.817073
354 F0P 0.415929 0.725
355 7MC 0.415929 0.817073
356 CPA 0.415929 0.825
357 DSZ 0.415842 0.776471
358 NSS 0.415842 0.776471
359 LSS 0.415842 0.758621
360 AAM 0.41573 0.971014
361 8PZ 0.415094 0.776471
362 NAP 0.414634 0.944444
363 SP1 0.413793 0.864865
364 RP1 0.413793 0.864865
365 CNA 0.413793 0.905405
366 A4P 0.412281 0.819277
367 NVA LMS 0.411765 0.75
368 YSA 0.411215 0.776471
369 8BR 0.411111 0.905405
370 F2R 0.410256 0.839506
371 5J9 0.409524 0.728395
372 CA5 0.409396 0.747253
373 ITT 0.408602 0.915493
374 NA0 0.408 0.931507
375 LEU LMS 0.407767 0.75
376 HMG 0.407407 0.75
377 AF3 ADP 3PG 0.40708 0.835443
378 NAD 0.40678 0.930556
379 COD 0.40678 0.788235
380 93P 0.406667 0.772727
381 UCA 0.406667 0.764045
382 CMP 0.406593 0.927536
383 71V 0.406593 0.881579
384 2BA 0.406593 0.942029
385 6C6 0.40625 0.88
386 GEK 0.405941 0.734177
387 12D 0.405405 0.783133
388 ADJ 0.405172 0.82716
389 YLA 0.405172 0.817073
390 KAA 0.403846 0.75
391 GSU 0.403846 0.776471
392 BT5 0.403361 0.829268
393 3GP 0.402174 0.891892
394 6IA 0.402062 0.835443
395 0UM 0.401961 0.695122
396 AYB 0.401709 0.807229
397 M24 0.401639 0.848101
398 PLM COA 0.40146 0.733333
399 COA PLM 0.40146 0.733333
400 80F 0.4 0.817073
401 J7V 0.4 0.809524
402 A3D 0.4 0.917808
Similar Binding Sites (Proteins are less than 50% similar to leader)
Pocket No.: 1; Query (leader) PDB : 1VKJ; Ligand: A3P; Similar sites found with APoc: 749
This union binding pocket(no: 1) in the query (biounit: 1vkj.bio1) has 15 residues
No: Leader PDB Ligand Sequence Similarity
1 2PZE ATP None
2 3T1O GDP None
3 4FRZ ADP 0.701754
4 1JJV ATP 0.970874
5 4WZ6 ATP 1.05263
6 4M7V RAR 1.14286
7 2HT6 GDP 1.14943
8 2CHG ANP 1.32743
9 1ZIN AP5 1.38249
10 4IDN GNP 1.40351
11 6CS8 F9Y 1.40351
12 1G0N NDP 1.41343
13 1G0N PHH 1.41343
14 4FDV 0UK 1.43541
15 2ORV 4TA 1.7094
16 1X6V ADP 1.75439
17 4KVA GTP 1.75439
18 4B47 GDP 1.75439
19 1IN4 ADP 1.75439
20 2FFQ GSP 1.75439
21 1G16 GDP 1.76471
22 2WZM NA7 1.76678
23 1ZUI SKM 1.78571
24 3BFV ADP 1.84502
25 3FB4 AP5 1.85185
26 4DKX GDP 1.85185
27 5NM7 GLY 1.8797
28 1HTW ADP 1.89873
29 2F9L GDP 2.01005
30 4U00 ADP 2.04918
31 1OIX GDP 2.09424
32 1OIV GDP 2.09424
33 1GOJ ADP 2.10526
34 1K6M AGS 2.10526
35 5L3V GDP 2.10526
36 5L3S GNP 2.10526
37 2IVN ANP 2.10526
38 1NHX PEP 2.10526
39 5JCP GDP ALF 2.10526
40 1NHX FTB 2.10526
41 2E5V FAD 2.10526
42 4NCN GTP 2.10526
43 2GMV UN8 2.10526
44 3KJS DQ1 2.10526
45 2GMV PEP 2.10526
46 3FPF MTA 2.10526
47 3FPF TNA 2.10526
48 2X7I CIT 2.10526
49 1V6A TRE 2.10526
50 5OE4 3UK 2.10526
51 5ZBR ANP 2.10526
52 5UXF 2BA 2.10526
53 2IYL GDP 2.11268
54 5GVR LMR 2.13675
55 5H5F SAM 2.13675
56 3RWO GDP 2.16216
57 4JLV ADP 2.23048
58 4LX0 BEF GDP 2.25989
59 4LHW GNP 2.29885
60 5EXT ADP 2.30769
61 3CH5 GDP 2.31481
62 1YZQ GNP 2.35294
63 3Q72 GNP 2.40964
64 1G3M A3P 2.45614
65 1G3M PCQ 2.45614
66 5LB3 ADP 2.45614
67 1AQU A3P 2.45614
68 1CR1 TTP 2.45614
69 3WYA GDP 2.45614
70 5YT0 GDP 2.45614
71 5AK0 8V1 2.45614
72 1W5T ANP 2.45614
73 3WY9 GDP 2.45614
74 1W5T ADP 2.45614
75 5FG3 GDP 2.45614
76 4HSE ADP 2.45614
77 3B9Q MLI 2.45614
78 1R6B ADP 2.45614
79 5L3W GDP 2.45614
80 2FSH ANP 2.45614
81 1F9V ADP 2.45614
82 5IRR GSP 2.45614
83 4TMZ GSP 2.45614
84 1QHG ATP 2.45614
85 3T34 GDP 2.45614
86 6CEP NAD 2.45614
87 6CEP OXM 2.45614
88 4G86 BNT 2.46479
89 1D5C GDP 2.46914
90 3KH5 ADP 2.5
91 4BAS GNP 2.51256
92 4YDS ATP 2.63158
93 3IUY AMP 2.63158
94 5BYK A3P 2.7027
95 5BYK OAQ 2.7027
96 1G6H ADP 2.72374
97 5TIV A3P 2.7668
98 3BFX A3P 2.80702
99 2B8W ALF 5GP 2.80702
100 1D2E GDP 2.80702
101 1GOT GDP 2.80702
102 5HR5 ADP 2.80702
103 1MKY GDP 2.80702
104 4ZG4 VO4 ADP 2.80702
105 2FNA ADP 2.80702
106 1JGT CMA 2.80702
107 1JGT APC 2.80702
108 2CE7 ADP 2.80702
109 1FNN ADP 2.80702
110 5Y6N ADP 2.80702
111 4ITM ATP 2.80702
112 6BSX GDP 2.80899
113 6BSX E7S 2.80899
114 4BQS ADP 2.84091
115 4BQS K2Q 2.84091
116 5XC5 GTP 2.84091
117 3NKV GNP 2.85714
118 1OFH ADP 2.87356
119 6FA4 GNP 2.89017
120 4LPS GDP 2.89256
121 4E03 ADP 2.91262
122 1Z08 GNP 2.94118
123 5U32 GDP 2.9661
124 2VWT PYR 2.99625
125 5XKT GNP 3
126 1CLU DBG 3.01205
127 5NNA BZM 3.0303
128 1SVI GDP 3.07692
129 1JJ7 ADP 3.07692
130 4M9Q GNP 3.0837
131 5MVR ADP 3.08642
132 1OW3 GDP 3.10881
133 1X8J A3P 3.15789
134 2QEN ADP 3.15789
135 2GN2 C5P 3.15789
136 2GKS ADP 3.15789
137 2IS6 ADP 3.15789
138 1T5C ADP 3.15789
139 1ZCB GDP 3.15789
140 3DZD ADP 3.15789
141 5OCQ CIT 3.15789
142 1Q19 SSC 3.15789
143 6B4K ANP 3.15789
144 2Q2Y MKR 3.15789
145 2Q2Y ADP 3.15789
146 3AB3 GDP 3.15789
147 5JCZ GDP 3.15789
148 5X40 ACP 3.15789
149 2BO4 FLC 3.15789
150 1Z6T ADP 3.15789
151 3ETG GTP 3.15789
152 2J5V PCA 3.15789
153 1PUJ GNP 3.19149
154 3BER AMP 3.21285
155 3TBK ANP 3.24324
156 1YZN GNP 3.24324
157 4TTQ ATP 3.25581
158 1KMQ GNP 3.26087
159 2ZEJ GDP 3.26087
160 2ZFI ADP 3.27869
161 4ZNL BEF ADP 3.28467
162 1FZQ GDP 3.31492
163 2EFE GNH 3.31492
164 1H65 GDP 3.33333
165 1JI0 ATP 3.33333
166 3NOJ PYR 3.36134
167 2JAQ DCP 3.41463
168 2QZ4 ADP 3.43511
169 3DEF GDP 3.43511
170 3CX8 GSP 3.44828
171 5IRC GDP 3.48259
172 3A1S GDP 3.48837
173 2OFW ADX 3.50877
174 4NE2 ADP 3.50877
175 4NE2 SH2 3.50877
176 5IRN ADP 3.50877
177 5M7P ADP 3.50877
178 1SQ5 ADP 3.50877
179 2OG2 MLI 3.50877
180 2FAH GDP 3.50877
181 5GOE GDP 3.50877
182 2W58 ADP 3.50877
183 5VGR GDP 3.50877
184 2C77 GNP 3.50877
185 6G14 G4P 3.50877
186 5W76 GDP 3.50877
187 2C78 GNP 3.50877
188 1TAD ALF 3.50877
189 1TAD GDP 3.50877
190 3FYH ADP 3.50877
191 3EWA ANP 3.50877
192 5VHC BEF ADP 3.50877
193 1TU3 GNP 3.50877
194 3QKT ANP 3.50877
195 5WDR GNP 3.50877
196 4DP3 MMV 3.50877
197 4DP3 NDP 3.50877
198 1WA5 GTP 3.50877
199 1DL5 SAH 3.50877
200 2H21 SAM 3.50877
201 2QG6 NMN 3.51759
202 1R2Q GNP 3.52941
203 1EK0 GNP 3.52941
204 6BYF CIT 3.52941
205 2HF9 GSP 3.53982
206 1YVD GNP 3.5503
207 1Z2A GDP 3.57143
208 5G41 AP5 3.58744
209 1KAO GDP 3.59281
210 4HDO GNP 3.59281
211 3X1Z GNP 3.59281
212 4HDQ GNP 3.59281
213 1QF9 ALF 3.60825
214 1QF9 C5P 3.60825
215 1QF9 ADP 3.60825
216 3REF GDP 3.60825
217 2P4Y C03 3.61011
218 3DOE GTP 3.63636
219 5KUT GDP 3.7037
220 3B5J 12D 3.7037
221 1ION ADP 3.7037
222 2A9K GDP 3.74332
223 4TMK T5A 3.75587
224 1U70 MTX 3.76344
225 1U70 NDP 3.76344
226 2CIG 1DG 3.77358
227 2GDJ ANP 3.78788
228 2CBZ ATP 3.79747
229 5LLB 6YZ 3.80228
230 1YRB GDP 3.81679
231 1B0U ATP 3.81679
232 4KVG GTP 3.84615
233 3Q9L ATP 3.84615
234 5MEX SZZ 3.85965
235 2ZPT A3P 3.85965
236 5MEX PAP 3.85965
237 2Y65 ADP 3.85965
238 2XT3 ADP 3.85965
239 2WHX ADP 3.85965
240 1SKQ GDP 3.85965
241 1D8T GDP 3.85965
242 3U6B GDP 3.85965
243 3U6K GDP 3.85965
244 4G5G GDP 3.85965
245 2HCJ GDP 3.85965
246 5JBQ GDP 3.85965
247 4PFO ADP 3.85965
248 1KK1 GNP 3.85965
249 1QF5 GDP 3.85965
250 1QF5 RPL 3.85965
251 6A20 ADP 3.85965
252 1RJ9 GCP 3.85965
253 3WQM B29 3.85965
254 5Z69 AGS 3.85965
255 2XTZ GSP 3.85965
256 5LTJ ADP 3.85965
257 2JLR ANP 3.85965
258 4R2I ANP 3.85965
259 3DC4 ADP 3.85965
260 5ZXD ATP 3.85965
261 1VBH PEP 3.85965
262 2XAU ADP 3.85965
263 4PC3 GDP 3.85965
264 3CAQ NDP 3.85965
265 4XQC 13D 3.85965
266 4XQC NAD 3.85965
267 2BVN GNP 3.85965
268 1PIG AGL GLC HMC AGL GLC BGC 3.85965
269 2Y8E GNP 3.91061
270 5SZH GNP 3.92157
271 1S3G AP5 4.14747
272 3TMK T5A 4.16667
273 1U8Z GDP 4.16667
274 1BG2 ADP 4.21053
275 4OHY ANP 4.21053
276 1YTM ATP 4.21053
277 3HU3 AGS 4.21053
278 5J1J ANP 4.21053
279 5I34 GDP 4.21053
280 5W75 GDP 4.21053
281 5CK5 GDP 4.21053
282 1IWE IMP 4.21053
283 1SVM ATP 4.21053
284 2RCN GDP 4.21053
285 5FFF NAP 4.21053
286 2I4I AMP 4.21053
287 2A2C ADP 4.21053
288 2A2C NG1 4.21053
289 3NRR D16 4.21053
290 3NRR NAP 4.21053
291 3FVQ ATP 4.21053
292 2ZPA ADP 4.21053
293 4IHQ ADP 4.21053
294 2AWN ADP 4.21053
295 1IBR GNP 4.21053
296 1G3Q ADP 4.21941
297 3KJI ADP 4.33071
298 1GXU 2HP 4.3956
299 3W5J GDP 4.41176
300 4WOP CTP 4.44444
301 2WOJ ADP ALF 4.51977
302 3ZS9 ADP ALF 4.51977
303 6C90 ADP 4.5614
304 6DEF GCP 4.5614
305 1G41 ADP 4.5614
306 2NCD ADP 4.5614
307 2OZE AGS 4.5614
308 6G28 AR6 4.5614
309 3RG9 WRA 4.58333
310 3RG9 NDP 4.58333
311 1Z0A GDP 4.5977
312 4NON GDP 4.61538
313 2BEK ATP 4.66926
314 1UPT GTP 4.67836
315 1L2T ATP 4.68085
316 1QXA GLY GLY GLY 4.68085
317 1GRN GDP 4.71204
318 1A4R GNH 4.71204
319 1A4R GDP 4.71204
320 2NGR GDP 4.71204
321 4KFU ACP 4.71698
322 1R4A GNP 4.84848
323 1DAK ADP 4.91071
324 1DAK DPU 4.91071
325 5W7Q GDP 4.91228
326 3TK1 GDP 4.91228
327 5BN3 ADP 4.91228
328 3TNF GNP 4.91228
329 1D2N ANP 4.91228
330 4XGU ADP 4.91228
331 3SFV GDP 4.91228
332 1WF3 GNP 4.91228
333 1YQT ADP 4.91228
334 4YC7 GNP 4.97238
335 5HCN GCP 4.98084
336 3QBT GNP 5
337 4B5W PYR 5.07812
338 1S8F GDP 5.08475
339 1B7T ADP 5.12821
340 3H4S ADP 5.18518
341 1KK8 BEF ADP 5.19481
342 4YLG GDP 5.20231
343 1AOE GW3 5.20833
344 1AOE NDP 5.20833
345 1M7G ADX 5.21327
346 1M7G AV2 5.21327
347 1M7G ADP 5.21327
348 4OI4 ATP 5.21739
349 2VVG ADP 5.26316
350 4ZI2 GNP 5.26316
351 1WQ1 GDP 5.26316
352 4WEI GLC GAL 5.26316
353 4H1V GNP 5.26316
354 4ZKD GDP 5.26316
355 5H7J GCP 5.26316
356 5H7K GDP 5.26316
357 2WKQ GTP 5.26316
358 4FCW ADP 5.26316
359 4LJ9 ACP 5.26316
360 5WC2 ADP 5.26316
361 3EZ2 ADP 5.26316
362 4QM7 GTP 5.26316
363 1G6O ADP 5.26316
364 5MZN ADP 5.26316
365 1VG8 GNP 5.31401
366 1VG0 GDP 5.31401
367 1ZJ6 G3D 5.34759
368 2VB6 ADP BEF 5.36913
369 5X0J AMP 5.3719
370 5X0J SEP 5.3719
371 4UXH T5A 5.43478
372 4P3Y GDP 5.49451
373 4R98 GNH 5.53506
374 2IXE ATP 5.53506
375 4XOI GTP 5.55556
376 1TX4 ALF GDP 5.55556
377 5O74 GDP 5.58376
378 1DAR GDP 5.61404
379 1F5N GNP 5.61404
380 1OS1 ATP 5.61404
381 1OS1 PYR 5.61404
382 4A4Z ANP 5.61404
383 5I0H ADP BEF 5.61404
384 2QZS 250 5.61404
385 2QZS ADP 5.61404
386 2QZS GLC 5.61404
387 2GK6 ADP 5.61404
388 1P72 ADP 5.61404
389 2WIC GNP 5.61798
390 5A96 GTP 5.62249
391 1W4R TTP 5.64103
392 3VX3 ADP 5.64516
393 3BOS CDP 5.78512
394 2X77 GDP 5.82011
395 5BQ5 ADP BEF 5.82011
396 4YMU ATP 5.90909
397 5DI3 GNP 5.94595
398 1VG9 GDP 5.94595
399 1VG1 GDP 5.94595
400 1UJ2 ADP 5.95238
401 1UJ2 C5P 5.95238
402 1XP8 AGS 5.96491
403 2OM2 GDP 5.96491
404 3V2U ATP 5.96491
405 4AG5 ADP 5.96491
406 1Y3A GDP 5.96491
407 4LC1 GDP 5.96491
408 1LVK MNT BEF 5.96491
409 1P9B GDP 5.96491
410 3FKQ ATP 5.96491
411 4LYA ATP 5.96491
412 1NVV GNP 5.96491
413 6D5G GNP 5.96491
414 6D5V GNP 5.96491
415 6D5J GNP 5.96491
416 6D56 GNP 5.96491
417 6D5L GNP 5.96491
418 6D5M GNP 5.96491
419 6D59 GNP 5.96491
420 6BVL GNP 5.96491
421 6D55 GNP 5.96491
422 6BVK GNP 5.96491
423 6BVM GNP 5.96491
424 6D5H GNP 5.96491
425 6BVJ GNP 5.96491
426 6D5E GNP 5.96491
427 6BVI GNP 5.96491
428 4KXV TDP DX5 5.96491
429 1NJF AGS 6
430 1NJF ADP 6
431 1KY3 GDP 6.04396
432 1NN5 2DT 6.04651
433 1NN5 ANP 6.04651
434 4X8O AP5 6.07477
435 3HGM ATP 6.12245
436 5IXK 6EW 6.14035
437 1Z0F GDP 6.14525
438 3PQC GDP 6.15385
439 2C9O ADP 6.31579
440 5L3R GCP 6.31579
441 3MD0 GDP 6.31579
442 1W0J ADP 6.31579
443 2BCG GDP 6.31579
444 5OCG GNP 6.31579
445 3CPJ GDP 6.31579
446 1FP6 ADP 6.31579
447 2YIC TPP 6.31579
448 2BII MTV 6.31579
449 1W0J ADP BEF 6.31579
450 4GNI ATP 6.31579
451 4MKG AP5 6.45161
452 6AIC AMP 6.54206
453 4BFW ZVW 6.60377
454 4PJ3 ANP 6.66667
455 5KDO GDP 6.66667
456 4PX9 ADP 6.66667
457 2ODE ALF GDP 6.66667
458 1SVK ALF GDP 6.66667
459 1IHU ADP 6.66667
460 1IHU AF3 6.66667
461 1BH2 GSP 6.66667
462 3IO3 ADP 6.66667
463 3QXC ATP 6.66667
464 6BC0 GSP 6.66667
465 1R0X ATP 6.66667
466 2WCU FUC 6.71141
467 1F2U ATP 6.75676
468 2CJW GDP 6.77083
469 2RGX AP5 6.79612
470 1FQK GDP 6.80272
471 1FQJ GDP 6.80272
472 5Z2M GTP 6.81818
473 2KIN ADP 7
474 3UIE ANP 7
475 4GBM A3P 7.01754
476 4P4T GDP 7.01754
477 1OXV ANP 7.01754
478 4D0N GDP 7.01754
479 4IEE AGS 7.01754
480 4PPF FLC 7.01754
481 1XMV ADP 7.01754
482 3E70 GDP 7.01754
483 5C9P FUC 7.01754
484 5IFS ADP 7.173
485 2PL3 ADP 7.20339
486 3GJ0 GDP 7.23982
487 3GJ3 GDP 7.23982
488 3GJ4 GDP 7.23982
489 3GJ5 GDP 7.23982
490 3GJ7 GDP 7.23982
491 4ITR GDP 7.27848
492 1I4D GDP 7.29167
493 1X1R GDP 7.30337
494 2OBM ADP 7.36842
495 5M04 GDP 7.36842
496 1TQ4 GDP 7.36842
497 4RD0 GDP 7.36842
498 3LRE ADP 7.36842
499 5YV5 ADP 7.36842
500 2O0J ADP 7.36842
501 2ZR9 DTP 7.36842
502 3NHB ADP 7.36842
503 5GLN XYP XYP XYP 7.36842
504 5GLN XYS 7.36842
505 1UKZ ADP 7.38916
506 1RYH GNP 7.38916
507 5EE5 GTP 7.51174
508 1MH1 GNP 7.52688
509 2V7Q ATP 7.53425
510 2CK3 ADP 7.53425
511 2V7Q ADP 7.53425
512 2CK3 ANP 7.53425
513 4QOS ADP 7.54717
514 3WYF GTP 7.56302
515 2W2X GSP 7.56757
516 2QQ0 TMP 7.6087
517 2QQ0 ADP 7.6087
518 2QQ0 THM 7.6087
519 2QQ0 ANP 7.6087
520 1G4U GDP 7.6087
521 2UZI GTP 7.69231
522 2BIF SIN 7.7193
523 2BIF ANP 7.7193
524 5FHD ADP ALF 7.7193
525 2D7D ADP 7.7193
526 3TKL GTP 7.7193
527 4K81 GTP 7.7193
528 1V8K ANP 7.7193
529 5FTB ANP 7.7193
530 4DCT GDP 7.7193
531 1AKY AP5 7.72727
532 2FZH DH1 7.76699
533 4D81 ADP 7.77385
534 1E96 GTP 7.8125
535 1OE0 TTP 7.82609
536 1O3Y GTP 7.83133
537 2J59 GTP 7.83133
538 3M1I GTP 7.8534
539 2FJU GSP 7.86517
540 1S9D GDP 7.92683
541 1RE0 GDP 7.92683
542 1Z06 GNP 7.93651
543 1W7J ADP BEF 7.94702
544 1HE1 GDP 7.95455
545 1Q20 A3P 8.07018
546 1Q20 PLO 8.07018
547 3COB ADP 8.07018
548 2DPY ADP 8.07018
549 5TSH ADP 8.07018
550 5TSH ANP 8.07018
551 1FFU CDP 8.07018
552 2G77 GDP 8.08081
553 2YOH WMJ 8.09524
554 6BCB GSP 8.21918
555 3Q85 GNP 8.28402
556 4NU0 AP5 8.29493
557 4TL6 ANP 8.3004
558 4R43 GDP 8.42105
559 1M2O GNP 8.42105
560 2QTV GNP 8.42105
561 5WRJ A3P 8.42105
562 6F5W KG1 8.42105
563 1WDT GTP 8.42105
564 3DKP ADP 8.57143
565 3KUD GDP 8.64198
566 1GUA GNP 8.64198
567 5BXQ GDP 8.66142
568 4FC7 COA 8.66426
569 4FC7 NAP 8.66426
570 1M7B GTP 8.69565
571 1VHT BA3 8.7156
572 3VMF GTP 8.77193
573 3WXM GTP 8.77193
574 2PID YSA 8.77193
575 4MOP 2H5 8.77193
576 3KTA AP5 8.79121
577 5UIV ADP 8.81057
578 3IIJ ADP 8.88889
579 4V03 ADP 8.94942
580 2J0V GDP 8.96226
581 5ZB0 ADP 9.09091
582 5ZB0 TYD 9.09091
583 1F6B GDP 9.09091
584 3SBD GNP 9.09091
585 2ZTS ADP 9.16335
586 3FWY ADP 9.23567
587 1Y63 ADP 9.23913
588 2EW1 GNP 9.45274
589 4J0Q GDP 9.47368
590 6AU6 GDP 9.47368
591 1CS4 GSP 9.47368
592 3EC1 GDP 9.47368
593 3T12 GDP ALF 9.55882
594 1Z83 AP5 9.69388
595 3AQ4 GDP 9.78261
596 3DDC GNP 9.81595
597 2ZIF SAM 9.82456
598 5HPY GDP 9.91379
599 1UAD GNP 10.101
600 1ZD9 GDP 10.1064
601 5H67 ATP 10.1064
602 1NY5 ADP 10.1754
603 5K5Z ANP 10.1754
604 2A5F GTP 10.2857
605 2V92 AMP 10.3448
606 2V92 ATP 10.3448
607 2CDN ADP 10.4478
608 4CVN ADP 10.4712
609 4KBF AMP 10.5263
610 3GJX GTP 10.5263
611 4KAX GTP 10.6509
612 4HAT GNP 10.7143
613 3B7G ANP 10.8696
614 3GJ8 GDP 10.8696
615 4WZA ADP 10.8772
616 4WZA ACP 10.8772
617 4YS0 ADP 10.8772
618 2W83 GTP 10.9091
619 2A5J GDP 10.9948
620 1XX6 ADP 10.9948
621 4HI0 GDP 11.0236
622 5E5U MLI 11.0553
623 3N5C GDP 11.1111
624 3PCR GTP 11.1111
625 5UQW GDP 11.1111
626 2WMO GTP 11.2281
627 4YJ1 ADP 11.2281
628 3MGB PAP 11.2281
629 3RAB GNP 11.2426
630 1LFD GNP 11.4943
631 5F90 GLA GAL BGC 5VQ 11.5385
632 5N69 ADP 11.5578
633 1G7S GDP 11.5789
634 1OYY AGS 11.5789
635 5FJJ MAN 11.5789
636 4UTG ANP 11.5789
637 4D0G GTP 11.5942
638 2XZ9 PYR 11.7284
639 4KM2 TOP 11.7318
640 4KM2 ATR 11.7318
641 1KSH GDP 11.8421
642 3T5G GDP 11.8421
643 1Z0J GTP 11.8644
644 3QF7 ANP 12
645 5TB5 GDP 12
646 6B8B ADP 12.0482
647 5TAR GDP 12.1622
648 3RLF ANP 12.2807
649 5O2T GSP 12.2995
650 1NRJ GTP 12.6582
651 2B4Q NAP 12.6812
652 3CYI ATP 12.7273
653 1YZG GDP 12.8492
654 5UWU GNP 13.0802
655 5UWJ GNP 13.0802
656 5UWI GNP 13.0802
657 5UWP GNP 13.0802
658 5UWT GNP 13.0802
659 5UWO GNP 13.0802
660 5UWH GNP 13.0802
661 5DI9 GNP 13.0802
662 6CIT GNP 13.0802
663 5UWW GNP 13.0802
664 5UWS GNP 13.0802
665 5DHF GNP 13.0802
666 5XG5 A2G 13.1034
667 1LVG ADP 13.1313
668 1KO8 6PG 13.1429
669 3WYG GTP 13.1579
670 2XTN GTP 13.2479
671 2WJH GDP 13.253
672 2WJH FLC 13.253
673 1MR3 G3D 13.2597
674 3ZIA ATP 13.3333
675 1J2J GTP 13.3333
676 3ZIA ADP 13.3333
677 2PEZ DAT 13.4078
678 2PEZ GGZ 13.4078
679 5LEF GTP 13.6364
680 3ZFD ANP 13.6842
681 6DWI HD4 13.7339
682 4DID GDP 13.8158
683 6BCA GSP 13.9073
684 4Q1A 2XZ 13.9286
685 4Q1A UDP 13.9286
686 4U5X GNP 14.0449
687 1NF3 GNP 14.0625
688 2HV8 GTP 14.0625
689 5OEC GDP 14.2077
690 5WRI A3P 14.386
691 5H68 AGS 14.386
692 3MJH GTP 14.7059
693 5UWR GNP 14.8148
694 3QVV 3QV 15.0877
695 3QVV A3P 15.0877
696 1RRC ADP 15.0877
697 1XEX ATP 15.1163
698 1CXZ GSP 15.1163
699 3CNL GNP 15.2672
700 2GCO GNP 15.4229
701 2GCN GDP 15.4229
702 2GWH A3P 15.4362
703 5G3Y ADP 15.4867
704 3EEL 53T 15.7895
705 4MIG G3F 15.7895
706 4V0K GDP 15.9763
707 4MKF AP5 16.129
708 2Z5F A3P 16.1404
709 1J99 AND 16.1404
710 4Z87 GDP 16.1404
711 3LXR GDP 16.1458
712 4XSH GSP 16.4384
713 1GWN GTP 16.5854
714 4XVU ATP 16.5899
715 4XTR ATP 16.5899
716 4XTR ADP 16.5899
717 3H86 AP5 16.6667
718 2FH5 GTP 16.7568
719 9LDT NAD 16.8421
720 2GJ8 ALF GDP 16.8605
721 5J1S ATP 17.0732
722 1XKV ATP 17.5439
723 1DS6 GDP 17.7778
724 3A4M ADP 18.0769
725 5UWQ GNP 18.1818
726 3P4X ADP 18.2456
727 4GOJ GNP 18.3333
728 2D2F ADP 18.4
729 5E95 GDP 18.5567
730 3ZQ6 ADP ALF 18.5965
731 5UPK GNP 18.75
732 1ZC3 GNP 19.469
733 2C5L GTP 19.6581
734 6CRK GDP 19.7183
735 1GP2 GDP 19.7183
736 3BC1 GNP 20.339
737 2D7C GTP 21.4286
738 5KSZ GCP 22.4561
739 2BME GNP 23.1183
740 1Z0K GTP 25
741 5DIF GNP 26.3158
742 5WLB GNP 26.4706
743 2WJG GDP 26.5957
744 5KSP GDP 28.4211
745 4C4P GNP 35.514
746 4GOX A3P 36.4912
747 3KPE TM3 43.5897
748 2QN6 GDP 44.4444
749 1NST A3P 46.6667
Pocket No.: 2; Query (leader) PDB : 1VKJ; Ligand: A3P; Similar sites found with APoc: 30
This union binding pocket(no: 2) in the query (biounit: 1vkj.bio1) has 22 residues
No: Leader PDB Ligand Sequence Similarity
1 5L3S G 2.10526
2 1KC7 PPR 2.45614
3 2ZJ5 ADP 2.45614
4 4UP3 NDP 2.80702
5 3LN9 FLC 2.8777
6 4KQ6 DLZ 3.35196
7 3GUZ PAF 3.40909
8 1IZC PYR 3.50877
9 4WBD CIT 3.85965
10 1RVV INI 3.8961
11 4O48 ASP 4.21053
12 3TUR DGL 4.5614
13 3TUR 6CL 4.5614
14 6C0B MLI 4.5614
15 1C3V PDC 5.30612
16 4PYA 2X3 5.59006
17 1PVN MZP 5.61404
18 3II1 BGC 5.61404
19 1D8C GLV 5.96491
20 1XPJ TLA 6.34921
21 2C6Q NDP 6.66667
22 2NUN ADP 7.01754
23 3ITJ CIT 7.36842
24 1KJ8 GAR 7.7193
25 2B99 RDL 8.33333
26 3B8I OXL 8.77193
27 3HY2 ATP 9.09091
28 4JD3 PLM 12.9825
29 4JD3 COA 12.9825
30 5W6Y TRP 16.1404
Pocket No.: 3; Query (leader) PDB : 1VKJ; Ligand: A3P; Similar sites found with APoc: 9
This union binding pocket(no: 3) in the query (biounit: 1vkj.bio1) has 22 residues
No: Leader PDB Ligand Sequence Similarity
1 3W9F I3P 2.69231
2 2F6U CIT 3.4188
3 5Z2F PDC 4.15094
4 4YDU ADP 4.91228
5 1JBW ACQ 4.91228
6 2Q0L NAP 5.61404
7 2AF6 BRU 6.20155
8 6HQD SRT 7.36842
9 1Q8O MAN MMA 7.53968
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