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Receptor
PDB id Resolution Class Description Source Keywords
1VG8 1.7 Å NON-ENZYME: TRANSPORT GPPNHP-BOUND RAB7 RATTUS NORVEGICUS GTP-BINDING PROTEIN PROTEIN TRANSPORT
Ref.: STRUCTURE OF THE RAB7:REP-1 COMPLEX: INSIGHTS INTO MECHANISM OF RAB PRENYLATION AND CHOROIDEREMIA DISE CELL(CAMBRIDGE,MASS.) V. 117 749 2004
Ligand
Ligand Chain:Residue Validity Ligand Warnings Binding Data NGL Viewer Molecular Weight (Da) Formula SMILES
GNP A:1400;
B:2400;
C:3400;
D:4400;
Valid;
Valid;
Valid;
Valid;
none;
none;
none;
none;
submit data
522.196 C10 H17 N6 O13 P3 c1nc2...
MG A:1401;
B:2401;
C:3401;
D:4401;
Part of Protein;
Part of Protein;
Part of Protein;
Part of Protein;
none;
none;
none;
none;
submit data
24.305 Mg [Mg+2...
View in 3D viewer
90% Homology Family
Leader
PDB id Resolution Class Description Source Keywords
1VG8 1.7 Å NON-ENZYME: TRANSPORT GPPNHP-BOUND RAB7 RATTUS NORVEGICUS GTP-BINDING PROTEIN PROTEIN TRANSPORT
Ref.: STRUCTURE OF THE RAB7:REP-1 COMPLEX: INSIGHTS INTO MECHANISM OF RAB PRENYLATION AND CHOROIDEREMIA DISE CELL(CAMBRIDGE,MASS.) V. 117 749 2004
Members (2)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 209 families.
1 1T91 - GTP C10 H16 N5 O14 P3 c1nc2c(n1[....
2 1VG8 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
70% Homology Family (5)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 391 families.
1 1KY2 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
2 1KY3 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
3 1T91 - GTP C10 H16 N5 O14 P3 c1nc2c(n1[....
4 1VG8 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
5 1VG1 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
50% Homology Family (274)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 149 families.
1 1Z2A - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
2 1Z22 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
3 1YZT - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
4 1YZU - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
5 1Z08 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
6 1Z0I - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
7 4DKX - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
8 2Y8E - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
9 2A5J - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
10 4LHW - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
11 4LHV - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
12 2P2L - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
13 2W2V - GTP C10 H16 N5 O14 P3 c1nc2c(n1[....
14 1MH1 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
15 2WKP - FMN C17 H21 N4 O9 P Cc1cc2c(cc....
16 2WKR - FMN C17 H21 N4 O9 P Cc1cc2c(cc....
17 2WKQ - FMN C17 H21 N4 O9 P Cc1cc2c(cc....
18 5WDO - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
19 3TGP - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
20 1P2T - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
21 4Q01 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
22 4M21 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
23 6ARK - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
24 821P - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
25 1Q21 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
26 5VPZ - GSP C10 H16 N5 O13 P3 S c1nc2c(n1[....
27 6F76 - CVK C24 H26 N2 O3 CN(C)Cc1cc....
28 6Q21 - GCP C11 H18 N5 O13 P3 c1nc2c(n1[....
29 4L9W - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
30 4WA7 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
31 3V4F - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
32 3K9N - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
33 5OCO - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
34 4M1T - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
35 4XVQ - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
36 5V71 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
37 5VP7 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
38 2QUZ - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
39 1CLU Kd = 5.4 nM DBG C23 H27 N8 O13 P3 c1ccc(cc1)....
40 4L8G - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
41 5VBM - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
42 2RGD - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
43 4PZY - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
44 4LPK - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
45 4DLV - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
46 4LRW - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
47 2CLD - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
48 4M1W - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
49 3L8Z - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
50 3LBH - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
51 721P - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
52 1LF5 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
53 1GNR - CAG C18 H23 N6 O16 P3 C[C@H](c1c....
54 4LUC - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
55 2RGE - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
56 4DLS - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
57 4M22 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
58 4DLY - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
59 1ZW6 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
60 2RGC - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
61 5VQ1 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
62 5V9L - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
63 2CL0 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
64 4TQA - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
65 3RRZ - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
66 5VPY - 9GM C10 H17 N6 O13 P3 c1nc2c(n1[....
67 2EVW - XY2 C12 H15 N5 O4 CC(=O)N(C)....
68 2RGB - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
69 4LDJ - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
70 1XJ0 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
71 1ZVQ - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
72 5VQ6 - GSP C10 H16 N5 O13 P3 S c1nc2c(n1[....
73 1P2S - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
74 5V6V - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
75 621P - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
76 1P2V - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
77 2CL7 - GTP C10 H16 N5 O14 P3 c1nc2c(n1[....
78 3OIW - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
79 4LV6 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
80 4DLT - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
81 1P2U - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
82 5V6S - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
83 5UK9 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
84 6ASE - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
85 3RS0 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
86 5B30 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
87 5B2Z - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
88 3KKN - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
89 4M1O - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
90 5VQ0 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
91 4M1Y - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
92 5VPI - GTP C10 H16 N5 O14 P3 c1nc2c(n1[....
93 5W22 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
94 3I3S - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
95 4OBE - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
96 3RRY - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
97 1QRA - GTP C10 H16 N5 O14 P3 c1nc2c(n1[....
98 6BP1 - GCP C11 H18 N5 O13 P3 c1nc2c(n1[....
99 4LYJ - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
100 121P - GCP C11 H18 N5 O13 P3 c1nc2c(n1[....
101 1RVD - DBG C23 H27 N8 O13 P3 c1ccc(cc1)....
102 5VBZ - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
103 2RGA - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
104 3RS7 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
105 5UHV - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
106 2CLC - GTP C10 H16 N5 O14 P3 c1nc2c(n1[....
107 4EPT - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
108 4EPY Kd = 340 uM 0QY C21 H21 N5 O c1ccc2c(c1....
109 4DLZ - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
110 1AGP - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
111 1GNQ - CAG C18 H23 N6 O16 P3 C[C@H](c1c....
112 2Q21 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
113 3RS2 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
114 5VQ8 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
115 4L9S - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
116 6B0Y - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
117 4M1S - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
118 4EPV - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
119 5WDP - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
120 4TQ9 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
121 3K8Y - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
122 3OIV - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
123 5OCT - 9R5 C9 H10 Cl N O2 c1cc2c(cc1....
124 5VBE - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
125 4Q02 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
126 3LBI - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
127 3RSL - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
128 1LF0 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
129 1XCM - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
130 421P - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
131 4DLR - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
132 2CE2 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
133 4QL3 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
134 4Q21 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
135 4DLU - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
136 1CTQ - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
137 3OIU - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
138 6B0V - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
139 3RS5 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
140 4EPW - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
141 5WDQ - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
142 1IOZ - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
143 221P - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
144 4LYH - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
145 4DLX - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
146 4Q03 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
147 4PZZ - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
148 3KKM - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
149 1JAI - GCP C11 H18 N5 O13 P3 c1nc2c(n1[....
150 3L8Y - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
151 3RS4 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
152 3LBN - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
153 4NMM - Y9Z C14 H22 N6 O12 P2 CC(=O)NCCO....
154 5VQ2 - GTP C10 H16 N5 O14 P3 c1nc2c(n1[....
155 3RSO - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
156 4XVR - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
157 5P21 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
158 5F2E - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
159 4EPX - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
160 4EPR - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
161 4DLW - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
162 5WHD - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
163 5V9O - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
164 5V9U - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
165 2RGG - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
166 4LYF - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
167 1JAH - GCP C11 H18 N5 O13 P3 c1nc2c(n1[....
168 1YU9 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
169 2BME - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
170 2BMD - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
171 1YZN - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
172 3RWM - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
173 3RWO - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
174 3REG - GSP C10 H16 N5 O13 P3 S c1nc2c(n1[....
175 2F9L - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
176 2F9M - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
177 1YZK - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
178 1OIV - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
179 2FE4 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
180 2FFQ - GSP C10 H16 N5 O13 P3 S c1nc2c(n1[....
181 2E9S - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
182 5US4 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
183 5UQW - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
184 5USJ - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
185 3NKV - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
186 1HUQ - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
187 1Z07 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
188 1N6R - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
189 1Z0D - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
190 1N6H - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
191 1N6P - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
192 1N6K - GDP AF3 n/a n/a
193 1N6N - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
194 1N6I - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
195 1R2Q - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
196 1N6L - GTP C10 H16 N5 O14 P3 c1nc2c(n1[....
197 1N6O - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
198 1TU4 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
199 1EK0 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
200 1S8F - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
201 1YZL - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
202 1WMS - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
203 1D5C - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
204 1Z0F - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
205 3E5H - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
206 4DSU - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
207 4DST - GCP C11 H18 N5 O13 P3 c1nc2c(n1[....
208 4DSO - GSP C10 H16 N5 O13 P3 S c1nc2c(n1[....
209 4DSN - GCP C11 H18 N5 O13 P3 c1nc2c(n1[....
210 5OCG - 9R5 C9 H10 Cl N O2 c1cc2c(cc1....
211 1KAO - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
212 3RAP - GTP C10 H16 N5 O14 P3 c1nc2c(n1[....
213 1YZQ - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
214 2GIL - GTP C10 H16 N5 O14 P3 c1nc2c(n1[....
215 1Z0A - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
216 1KY2 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
217 1KY3 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
218 2HT6 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
219 3KKO - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
220 3KKQ - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
221 3KKP - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
222 1X1R - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
223 1X1S - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
224 1T91 - GTP C10 H16 N5 O14 P3 c1nc2c(n1[....
225 1VG8 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
226 2GCP - GSP C10 H16 N5 O13 P3 S c1nc2c(n1[....
227 2GCN - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
228 3X1Z - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
229 3X1Y - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
230 3X1W - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
231 3X1X - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
232 4Z8Y - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
233 1G17 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
234 1G16 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
235 1M7B - GTP C10 H16 N5 O14 P3 c1nc2c(n1[....
236 2DPX - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
237 3Q7Q - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
238 3Q7P - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
239 3Q72 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
240 1U8Z - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
241 1U90 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
242 1U8Y - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
243 1YVD - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
244 5WDR - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
245 5WDS - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
246 1Z06 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
247 3TH5 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
248 3SBD - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
249 1OIX - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
250 1OIW - GSP C10 H16 N5 O13 P3 S c1nc2c(n1[....
251 2QRZ - GCP C11 H18 N5 O13 P3 c1nc2c(n1[....
252 1A4R Kd = 9.4 pM GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
253 1KMQ - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
254 1DPF - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
255 1FTN - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
256 5A0F - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
257 1A2B - GSP C10 H16 N5 O13 P3 S c1nc2c(n1[....
258 4U5X - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
259 3Q85 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
260 1RYH - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
261 1RYF - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
262 1VG1 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
263 5XC5 - GTP C10 H16 N5 O14 P3 c1nc2c(n1[....
264 5XC3 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
265 3RAB - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
266 1GWN - GTP C10 H16 N5 O14 P3 c1nc2c(n1[....
267 2EW1 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
268 4O25 - GTP C10 H16 N5 O14 P3 c1nc2c(n1[....
269 4O2R - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
270 4O2L - GTP C10 H16 N5 O14 P3 c1nc2c(n1[....
271 6BSX - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
272 5YXH - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
273 1XTQ - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
274 3SEA - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
Polypharmacology
Similar Ligands
Ligand no: 1; Ligand: GNP; Similar ligands found: 132
No: Ligand ECFP6 Tc MDL keys Tc
1 GNP 1 1
2 9GM 1 1
3 GDP 0.839506 0.973684
4 GP3 0.82716 0.948718
5 GTP 0.809524 0.973684
6 GNH 0.807229 0.986842
7 G1R 0.77907 0.961039
8 GCP 0.77907 0.948718
9 GSP 0.770115 0.925
10 5GP 0.756098 0.960526
11 G 0.756098 0.960526
12 G2R 0.747253 0.936709
13 GMV 0.747126 0.948718
14 GAV 0.714286 0.936709
15 GP2 0.712644 0.936709
16 G2P 0.711111 0.936709
17 Y9Z 0.708333 0.880952
18 GDC 0.690722 0.936709
19 GDD 0.690722 0.936709
20 GKE 0.690722 0.936709
21 G5P 0.686869 0.948718
22 GPG 0.684211 0.936709
23 GTG 0.683673 0.91358
24 GDR 0.683673 0.936709
25 GFB 0.683673 0.936709
26 JB2 0.68 0.936709
27 GKD 0.68 0.936709
28 6CK 0.676768 0.91358
29 G3A 0.676768 0.948718
30 GDX 0.673267 0.948718
31 ALF 5GP 0.67033 0.86747
32 YGP 0.663265 0.879518
33 GPD 0.656863 0.902439
34 ALF GDP 0.645833 0.86747
35 GDP AF3 0.645833 0.86747
36 GDP ALF 0.645833 0.86747
37 JB3 0.641509 0.925
38 DBG 0.640351 0.974359
39 G3D 0.638298 0.960526
40 G4P 0.625 0.960526
41 GMP 0.621951 0.857143
42 NGD 0.62037 0.936709
43 GGM 0.618182 0.925926
44 0O2 0.616162 0.960526
45 2MD 0.603604 0.870588
46 CAG 0.60177 0.904762
47 U2G 0.590909 0.91358
48 FEG 0.590909 0.858824
49 GDP 7MG 0.590476 0.888889
50 MGD 0.587719 0.870588
51 G G 0.586538 0.924051
52 ZGP 0.585586 0.848837
53 CG2 0.580357 0.91358
54 ANP 0.568421 0.922078
55 PGD 0.567797 0.902439
56 MD1 0.567797 0.870588
57 3GP 0.56044 0.922078
58 TPG 0.558333 0.822222
59 GH3 0.55 0.948052
60 FE9 0.546219 0.778947
61 GPX 0.539216 0.922078
62 G4M 0.539062 0.860465
63 DGI 0.536082 0.9
64 BGO 0.535088 0.901235
65 IDP 0.53125 0.947368
66 DGT 0.53 0.9
67 2GP 0.526882 0.935065
68 G1R G1R 0.520325 0.901235
69 GCP G 0.518868 0.897436
70 A G 0.516949 0.911392
71 U A G G 0.512605 0.911392
72 G A A A 0.504202 0.9
73 AGO 0.504202 0.91358
74 P2G 0.5 0.860759
75 G1G 0.5 0.902439
76 R7I 0.49505 0.922078
77 MGP 0.49505 0.936709
78 R5I 0.49505 0.922078
79 PGD O 0.492063 0.831461
80 6G0 0.490196 0.936709
81 P1G 0.489796 0.85
82 AKW 0.483051 0.869048
83 DG 0.474227 0.8875
84 DGP 0.474227 0.8875
85 G U 0.466667 0.878049
86 IMP 0.463918 0.934211
87 G2Q 0.462963 0.936709
88 GPC 0.459677 0.858824
89 G C 0.459016 0.878049
90 GTA 0.448276 0.91358
91 G7M 0.444444 0.924051
92 MAP 0.439252 0.898734
93 G G G RPC 0.435484 0.853659
94 B4P 0.434343 0.871795
95 AP5 0.434343 0.871795
96 ADP 0.434343 0.896104
97 A2D 0.43299 0.871795
98 AT4 0.43 0.8625
99 G G G C 0.426357 0.890244
100 AU1 0.425743 0.922078
101 SGP 0.425743 0.807229
102 BA3 0.424242 0.871795
103 A G C C 0.423077 0.888889
104 35G 0.423077 0.909091
105 PCG 0.423077 0.909091
106 C2E 0.423077 0.897436
107 APC G U 0.421875 0.864198
108 HEJ 0.421569 0.896104
109 ATP 0.421569 0.896104
110 ACQ 0.419048 0.873418
111 5GP 5GP 0.419048 0.860759
112 5FA 0.417476 0.896104
113 AQP 0.417476 0.896104
114 01G 0.417391 0.880952
115 AN2 0.415842 0.909091
116 UNP 0.415842 0.810127
117 6AD 0.415094 0.821429
118 M33 0.411765 0.860759
119 ITT 0.411765 0.846154
120 G C C C 0.410448 0.901235
121 HFD 0.409524 0.851852
122 G U34 0.408 0.86747
123 ACP 0.407767 0.873418
124 6YZ 0.407407 0.873418
125 AR6 0.403846 0.871795
126 APR 0.403846 0.871795
127 DG DG 0.403509 0.845238
128 A4P 0.403226 0.848837
129 UCG 0.402985 0.888889
130 SAP 0.4 0.851852
131 AGS 0.4 0.851852
132 AD9 0.4 0.873418
Similar Binding Sites (Proteins are less than 50% similar to leader)
Pocket No.: 1; Query (leader) PDB : 1VG8; Ligand: GNP; Similar sites found with APoc: 566
This union binding pocket(no: 1) in the query (biounit: 1vg8.bio2) has 27 residues
No: Leader PDB Ligand Sequence Similarity
1 2HF9 GSP None
2 1GXU 2HP None
3 5FUI APY None
4 4LPS GDP None
5 1ZUI SKM None
6 2RGX AP5 None
7 4BQS ADP None
8 4BQS K2Q None
9 3CM2 X23 None
10 2IL4 COA None
11 1DCP HBI None
12 6AR9 3L4 None
13 1SQL GUN None
14 4TTQ ATP None
15 5VGR GDP 0.966184
16 1W0H AMP 0.980392
17 5W76 GDP 1.44928
18 5Y6N ADP 1.44928
19 4ZNL BEF ADP 1.44928
20 3IUY AMP 1.44928
21 4KFU ACP 1.93237
22 3WY9 GDP 1.93237
23 3WYA GDP 1.93237
24 2D2F ADP 1.93237
25 3DKP ADP 1.93237
26 3BOS CDP 1.93237
27 1QF5 RPL 1.93237
28 1QF5 GDP 1.93237
29 2ZPA ADP 1.93237
30 6AIC AMP 1.93237
31 4E03 ADP 1.94175
32 2W58 ADP 1.9802
33 2Q37 3AL 2.20994
34 5GVR LMR 2.41546
35 3FWY ADP 2.41546
36 2J5V PCA 2.41546
37 1S3G AP5 2.41546
38 2XT3 ADP 2.41546
39 1NST A3P 2.41546
40 1P72 ADP 2.41546
41 3R7F CP 2.41546
42 1UJ2 ADP 2.41546
43 1BG2 ADP 2.41546
44 1UJ2 C5P 2.41546
45 4GBM A3P 2.41546
46 1T5C ADP 2.89855
47 2WHX ADP 2.89855
48 1H65 GDP 2.89855
49 5K5Z ANP 2.89855
50 5Z69 AGS 2.89855
51 2BEK ATP 2.89855
52 5H68 AGS 2.89855
53 5VLQ ANP 2.89855
54 2IXE ATP 2.89855
55 2WZF BGC 2.89855
56 1GOJ ADP 2.89855
57 4FRZ ADP 2.89855
58 4PVR ASP 2.89855
59 5M7P ADP 2.89855
60 3S6X SIA GAL BGC 2.89855
61 1NHX FTB 2.89855
62 1NHX PEP 2.89855
63 5XDR ADP 2.89855
64 3TW1 AHN 2.89855
65 3FKQ ATP 2.94906
66 2O66 FLC 2.96296
67 2DT9 THR 2.99401
68 4PU6 ASP 3.05344
69 1Z83 AP5 3.06122
70 1SKQ GDP 3.38164
71 5H7K GDP 3.38164
72 5ZBR ANP 3.38164
73 3MD0 GDP 3.38164
74 2IS6 ADP 3.38164
75 1VHT BA3 3.38164
76 2CHG ANP 3.38164
77 4WOP CTP 3.38164
78 3IO3 ADP 3.38164
79 4RZ3 ADP 3.38164
80 1FP6 ADP 3.38164
81 5G41 AP5 3.38164
82 3AB4 THR 3.38164
83 4O48 ASP 3.38164
84 1QAN SAH 3.38164
85 2FAH GDP 3.38164
86 1T8U UAP SGN IDS SGN 3.38164
87 4UOX PUT 3.38164
88 2Z5F A3P 3.38164
89 2HXW FLC 3.38164
90 1T8U A3P 3.38164
91 4QM7 GTP 3.50877
92 3H4S ADP 3.7037
93 1UYY BGC BGC 3.81679
94 4P83 U5P 3.84615
95 5U32 GDP 3.86473
96 2GKS ADP 3.86473
97 3EC1 GDP 3.86473
98 2DPY ADP 3.86473
99 4PX9 ADP 3.86473
100 5UIV ADP 3.86473
101 2PL3 ADP 3.86473
102 4WZA ACP 3.86473
103 4WZA ADP 3.86473
104 2GDJ ANP 3.86473
105 1V8K ANP 3.86473
106 2GK6 ADP 3.86473
107 2D7D ADP 3.86473
108 4OHY ANP 3.86473
109 1NJF AGS 3.86473
110 3VX3 ADP 3.86473
111 1NJF ADP 3.86473
112 1ZIN AP5 3.86473
113 1QHG ATP 3.86473
114 3A4M ADP 3.86473
115 3FYH ADP 3.86473
116 4NE2 SH2 3.86473
117 4NE2 ADP 3.86473
118 4WEI GLC GAL 3.86473
119 2ATJ BHO 3.86473
120 2GWH A3P 3.86473
121 2JLR ANP 3.86473
122 1NT4 G1P 3.86473
123 1TL2 NDG 3.86473
124 4BFW ZVW 3.86473
125 1Z6T ADP 3.86473
126 5H4S RAM 3.86473
127 3EWA ANP 3.86473
128 3L8H FX1 3.91061
129 3H86 AP5 4.16667
130 2IYL GDP 4.22535
131 3EZ2 ADP 4.34783
132 3T34 GDP 4.34783
133 4XTR ATP 4.34783
134 4XVU ATP 4.34783
135 4A4Z ANP 4.34783
136 4XTR ADP 4.34783
137 4MKG AP5 4.34783
138 2X7I CIT 4.34783
139 4MKF AP5 4.34783
140 1G3Q ADP 4.34783
141 1ION ADP 4.34783
142 3BFV ADP 4.34783
143 4PJ3 ANP 4.34783
144 1YTM ATP 4.34783
145 3BFX A3P 4.34783
146 1XKV ATP 4.34783
147 2NCD ADP 4.34783
148 4D81 ADP 4.34783
149 1OS1 ATP 4.34783
150 1OS1 PYR 4.34783
151 2WW4 ADP 4.34783
152 1WY7 SAH 4.34783
153 4AG5 ADP 4.34783
154 1U2Z SAH 4.34783
155 1SVM ATP 4.34783
156 2OFW ADX 4.34783
157 5O96 SAM 4.34783
158 4R43 GDP 4.34783
159 6FMC DUE 4.43038
160 4HUT ATP 4.71204
161 1BO4 COA 4.7619
162 3U6B GDP 4.83092
163 2BVN GNP 4.83092
164 4WZ6 ATP 4.83092
165 5TSH ADP 4.83092
166 5TSH ANP 4.83092
167 1D8T GDP 4.83092
168 2HCJ GDP 4.83092
169 5JBQ GDP 4.83092
170 4G5G GDP 4.83092
171 3U6K GDP 4.83092
172 1RJ9 GCP 4.83092
173 1D2E GDP 4.83092
174 4PC3 GDP 4.83092
175 5I0H ADP BEF 4.83092
176 1U0J ADP 4.83092
177 2FSH ANP 4.83092
178 5L3V GDP 4.83092
179 5J1J ANP 4.83092
180 2Q2Y ADP 4.83092
181 2Q2Y MKR 4.83092
182 4V03 ADP 4.83092
183 1X6V ADP 4.83092
184 4NU0 AP5 4.83092
185 1OYY AGS 4.83092
186 1P9B GDP 4.83092
187 6B8B ADP 4.83092
188 1P9B HDA 4.83092
189 2O0J ADP 4.83092
190 1SQ5 ADP 4.83092
191 1NY5 ADP 4.83092
192 1TE2 PGA 4.83092
193 1DNP MHF 4.83092
194 2PZE ATP 4.83092
195 2I4I AMP 4.83092
196 1UKZ ADP 4.92611
197 5M04 GDP 5
198 2YIP YIO 5.07246
199 1ONI BEZ 5.07246
200 1B7T ADP 5.12821
201 4LO6 SIA GAL 5.26316
202 4PPF FLC 5.31401
203 5YV5 ADP 5.31401
204 1YQT ADP 5.31401
205 1KK1 GNP 5.31401
206 4P4T GDP 5.31401
207 5KSZ GCP 5.31401
208 4IDN GNP 5.31401
209 4R2I ANP 5.31401
210 1W5T ADP 5.31401
211 1VKJ A3P 5.31401
212 4LYA ATP 5.31401
213 1F9V ADP 5.31401
214 6A20 ADP 5.31401
215 3ITJ CIT 5.31401
216 1G6O ADP 5.31401
217 1LK7 DER 5.31401
218 1W5T ANP 5.31401
219 2Q8M AMP 5.31401
220 5ZXD ATP 5.31401
221 1XMV ADP 5.31401
222 1JJV ATP 5.33981
223 2CDN ADP 5.47264
224 3KTA AP5 5.49451
225 2ZTS ADP 5.57769
226 2PEZ DAT 5.58659
227 2PEZ GGZ 5.58659
228 1KK8 BEF ADP 5.7554
229 5KSP GDP 5.78947
230 3VMF GTP 5.7971
231 2XTZ GSP 5.7971
232 3WXM GTP 5.7971
233 2RCN GDP 5.7971
234 1TQ4 GDP 5.7971
235 4LC1 GDP 5.7971
236 3TBK ANP 5.7971
237 3ZQ6 ADP ALF 5.7971
238 4FCW ADP 5.7971
239 4LJ9 ACP 5.7971
240 1DAK ADP 5.7971
241 1DAK DPU 5.7971
242 1IHU ADP 5.7971
243 1IHU AF3 5.7971
244 3KJI ADP 5.7971
245 1E2K TMC 5.7971
246 3FVQ ATP 5.7971
247 3VM7 GLC 5.7971
248 1G41 ADP 5.7971
249 1OFH ADP 5.7971
250 1CR1 TTP 5.7971
251 3KC1 2T6 5.7971
252 4OI4 ATP 5.7971
253 6H5E ANP 5.7971
254 1AQU A3P 5.7971
255 2PW0 TRC 5.7971
256 1Y63 ADP 5.97826
257 4MN7 SME 6.04027
258 1CS4 GSP 6.28019
259 1RRC ADP 6.28019
260 2OBM ADP 6.28019
261 1F5N GNP 6.28019
262 2FNA ADP 6.28019
263 5G3Y ADP 6.28019
264 4HSE ADP 6.28019
265 1I0B PEL 6.28019
266 1R6B ADP 6.28019
267 2CE7 ADP 6.28019
268 2JEN GLC GLC XYS XYS 6.28019
269 1O8B ABF 6.28019
270 5YJ0 EF2 6.30631
271 5YIZ EF2 6.30631
272 2B99 RDL 6.41026
273 3UIE ANP 6.5
274 1FQJ ALF 6.76329
275 2ODE ALF GDP 6.76329
276 1TAD ALF 6.76329
277 1TAD GDP 6.76329
278 1BH2 GSP 6.76329
279 1FQJ GDP 6.76329
280 1FQK GDP 6.76329
281 1Y3A GDP 6.76329
282 6CRK GDP 6.76329
283 1GP2 GDP 6.76329
284 2OM2 GDP 6.76329
285 3ZFD ANP 6.76329
286 5MZN ADP 6.76329
287 4Q1A UDP 6.76329
288 4Q1A 2XZ 6.76329
289 1FQK ALF 6.76329
290 5NM7 GLY 6.76329
291 3FB4 AP5 6.76329
292 2C9O ADP 6.76329
293 3NHB ADP 6.76329
294 1XX6 ADP 6.80628
295 4DCT GDP 7.24638
296 1G7C 5GP 7.24638
297 2OG2 MLI 7.24638
298 3B9Q MLI 7.24638
299 4JLV ADP 7.24638
300 5LTJ BEF 7.24638
301 4IHQ ADP 7.24638
302 3ZS9 ADP ALF 7.24638
303 2WOJ ADP ALF 7.24638
304 4ZDJ UTP 7.24638
305 2BIF ANP 7.24638
306 2BIF SIN 7.24638
307 5LTJ ADP 7.24638
308 1G8S MET 7.24638
309 2XAU ADP 7.24638
310 3FSY SCA 7.53012
311 5ZB0 ADP 7.57576
312 5ZB0 TYD 7.57576
313 1WDT GTP 7.72947
314 3ZIA ADP 7.72947
315 3ZIA ATP 7.72947
316 2QEN ADP 7.72947
317 3VPD CIT 7.72947
318 1IN4 ADP 7.72947
319 5J1S ATP 7.72947
320 3P4X ADP 7.72947
321 3DZD ADP 7.72947
322 4YS0 ADP 7.72947
323 3UG4 AHR 7.72947
324 3PQC GDP 8.20513
325 1PUJ GNP 8.21256
326 6G14 G4P 8.21256
327 5IFS ADP 8.21256
328 5L3S GNP 8.21256
329 3B7G ANP 8.21256
330 4QOS ADP 8.21256
331 3DEF GDP 8.21256
332 1LVK MNT BEF 8.21256
333 1FNN ADP 8.21256
334 5L3W GDP 8.21256
335 4X8O AP5 8.21256
336 4IOK XPO 8.21256
337 4IOK ADP 8.21256
338 3QXC ATP 8.21256
339 3HU3 AGS 8.21256
340 2BO4 FLC 8.21256
341 3QF7 ANP 8.21256
342 4CVN ADP 8.37696
343 2B8W ALF 5GP 8.69565
344 4YJ1 ADP 8.69565
345 4Y4V DAL 8.69565
346 4KVA GTP 8.69565
347 3Q9L ATP 8.69565
348 5N69 ADP 8.69565
349 2Y65 ADP 8.69565
350 6FAA ADP 8.69565
351 1SVI GDP 8.71795
352 3IIJ ADP 8.88889
353 3CNL GNP 9.17874
354 5L3R GCP 9.17874
355 5H7J GCP 9.17874
356 5WC2 ADP 9.17874
357 3LRE ADP 9.17874
358 4JLS 3ZE 9.21053
359 2B4B COA 9.35672
360 1GPJ CIT 9.40594
361 5H67 ATP 9.57447
362 6AU6 GDP 9.66184
363 4ZG4 VO4 ADP 9.66184
364 4H1V GNP 9.66184
365 4IEE AGS 9.66184
366 3RC3 ANP 9.66184
367 4QRH 0O2 9.66184
368 4TL6 ANP 9.66184
369 5FHD ADP ALF 9.66184
370 2NZ5 226 9.66184
371 2VVG ADP 9.66184
372 4TQK NAG 9.66184
373 5FTB ANP 9.66184
374 2XCU C5P 9.66184
375 1NN5 ANP 9.66184
376 1NN5 2DT 9.66184
377 3QOX SAH 9.66184
378 5IRR GSP 10.1449
379 5LB3 ADP 10.1449
380 1IWE IMP 10.1449
381 1M7G ADX 10.1449
382 1M7G ADP 10.1449
383 1M7G AV2 10.1449
384 1W0J ADP 10.1449
385 1W0J ADP BEF 10.1449
386 4P3Y GDP 10.4396
387 1SVK ALF GDP 10.628
388 4XGU ADP 10.628
389 3RLF ANP 10.628
390 2QZ4 ADP 10.628
391 5MEX PAP 10.628
392 2AWN ADP 10.628
393 1YRB GDP 11.1111
394 5CK5 GDP 11.1111
395 1XP8 AGS 11.1111
396 6B4K ANP 11.1111
397 5XKT GNP 11.5
398 6C90 ADP 11.5385
399 5W7Q GDP 11.5942
400 2VB6 ADP BEF 11.5942
401 5AK0 8V1 11.5942
402 4PFO ADP 11.5942
403 3BER AMP 11.5942
404 2KIN ADP 11.5942
405 1K6M AGS 11.5942
406 4YDS ATP 11.5942
407 5HCN GCP 12.0773
408 2ZR9 DTP 12.0773
409 1AKY AP5 12.0773
410 1R0X ATP 12.5604
411 4U60 SIA GAL NGA 12.5604
412 4U60 SIA 12.5604
413 5BN3 ADP 12.5604
414 4U60 SIA GAL BGC NGA GAL 12.5604
415 5DT6 GLU 12.5604
416 4B1M FRU FRU 12.973
417 2C78 GNP 13.0435
418 2C77 GNP 13.0435
419 6DEF GCP 13.0435
420 1DAR GDP 13.0435
421 1VMK GUN 13.0435
422 1LVG ADP 13.1313
423 3QKT ANP 13.5266
424 1APZ ASP 13.5802
425 4RD0 GDP 14.0097
426 2QN6 GDP 14.0097
427 4KBF AMP 14.0097
428 5HR5 ADP 14.4928
429 3E70 GDP 14.4928
430 5VHC BEF ADP 14.4928
431 2OZE AGS 14.4928
432 3CX8 GSP 14.9758
433 1ZCB GDP 14.9758
434 3AB3 GDP 14.9758
435 3DC4 ADP 14.9758
436 4GOX A3P 14.9758
437 2CBZ ATP 14.9758
438 4J0Q GDP 15.4589
439 5EXT ADP 15.4589
440 1QHH ATP 16.1677
441 1W7J ADP BEF 16.5563
442 5W75 GDP 17.3913
443 4B47 GDP 17.3913
444 5W75 SUC 17.3913
445 4HI0 GDP 17.8744
446 1F2U ATP 18.9189
447 2FH5 GTP 19.3237
448 2X77 GDP 20.1058
449 1MKY GDP 20.2899
450 3TK1 GDP 20.2899
451 3DOE GTP 20.8333
452 2XTN GTP 21.256
453 1KSH GDP 21.5054
454 1HTW ADP 21.519
455 6CS8 F9Y 21.7391
456 5I34 GDP 22.2222
457 4ZKD GDP 23.1884
458 5ODQ 9SB 23.5714
459 5GOE GDP 23.6715
460 5BQ5 ADP BEF 23.8095
461 5KUT GDP 25.9259
462 5IRN ADP 26.087
463 5KDO GDP 27.027
464 4GOJ GNP 28.0423
465 4ZI2 GNP 28.4211
466 5DI3 GNP 28.5024
467 4M9Q GNP 28.5024
468 1GOT GDP 28.7671
469 3AQ4 GDP 29.3478
470 1FZQ GDP 29.8343
471 4KAX GTP 30.1775
472 5MVR ADP 30.2469
473 2A5F GTP 30.2857
474 3PCR GTP 31.4815
475 2W83 GTP 31.5152
476 4YLG GDP 31.7919
477 1KO8 6PG 32
478 3N5C GDP 32.716
479 1E96 GTP 33.3333
480 1G7S GDP 33.3333
481 2QTV GNP 33.5329
482 2J59 GTP 33.7349
483 4NCN GTP 33.8164
484 4TMZ GSP 33.8164
485 5FG3 GDP 33.8164
486 1I4D GDP 33.8542
487 5YT0 GDP 34.2995
488 1NF3 GNP 34.359
489 1G4U AF3 34.7826
490 1G4U GDP 34.7826
491 4DID GDP 35.2332
492 2ZEJ GDP 35.3261
493 1GRN GDP 35.6021
494 1GRN AF3 35.6021
495 4ITR GDP 35.6021
496 2NGR GDP 35.6021
497 2NGR AF3 35.6021
498 2WMO GTP 35.7895
499 2FJU GSP 35.9551
500 5UPK GNP 36.2162
501 1UPT GTP 36.2573
502 1HE1 GDP 36.3636
503 1HE1 AF3 36.3636
504 3REF GDP 36.5979
505 4V0K GDP 37.2781
506 5EE5 GTP 37.4269
507 4YC7 GNP 37.5691
508 4BAS GNP 37.6884
509 3T12 GDP ALF 37.8788
510 3T1O GDP 37.8788
511 2V7Q ADP 38
512 2V7Q ATP 38
513 2CK3 ANP 38
514 2CK3 ADP 38
515 1WF3 GNP 38.1642
516 2GJ8 ALF GDP 38.3721
517 1MR3 G3D 40.3315
518 5JCP GDP ALF 41.0628
519 2GCO GNP 42.2886
520 1DS6 GDP 42.7083
521 2CJW GDP 43.2292
522 2W2X GSP 43.7838
523 3M1I GTP 43.9614
524 3WYF GTP 43.9614
525 1OW3 GDP 44.0415
526 3T5G GDP 45.3039
527 3GJ7 GDP 45.8937
528 3GJ5 GDP 45.8937
529 3GJX GTP 45.8937
530 3GJ8 GDP 45.8937
531 3GJ4 GDP 45.8937
532 2J0V GDP 45.8937
533 5HPY GDP 45.9459
534 5DIF GNP 46.3768
535 5UWP GNP 46.3768
536 4HAT GNP 46.3768
537 5UWW GNP 46.3768
538 5UWI GNP 46.3768
539 5UWJ GNP 46.3768
540 5UWQ GNP 46.3768
541 6CIT GNP 46.3768
542 5UWR GNP 46.3768
543 5UWT GNP 46.3768
544 5DHF GNP 46.3768
545 5UWU GNP 46.3768
546 5UWH GNP 46.3768
547 5UWS GNP 46.3768
548 5BXQ GDP 46.3768
549 1IBR GNP 46.3768
550 5DI9 GNP 46.3768
551 3CH5 GDP 46.3768
552 3GJ3 GDP 46.3768
553 3GJ0 GDP 46.3768
554 6BCA GSP 46.4865
555 6BCB GSP 46.4865
556 6BC0 GSP 46.4865
557 3LXR GDP 46.4865
558 4D0N GDP 46.4865
559 4XOI GTP 46.6667
560 4XSH GSP 46.9274
561 1CXZ GSP 47.2527
562 5IRC GDP 47.3118
563 1TX4 ALF GDP 47.4576
564 2G77 GDP 48.9899
565 2G77 AF3 48.9899
566 5SZH GNP 49.7537
567 5UWO GNP 50
568 3WYG GTP 50
Pocket No.: 2; Query (leader) PDB : 1VG8; Ligand: GNP; Similar sites found with APoc: 26
This union binding pocket(no: 2) in the query (biounit: 1vg8.bio3) has 27 residues
No: Leader PDB Ligand Sequence Similarity
1 4PYA 2X3 None
2 5C2N NAG None
3 2UVO NDG 1.16959
4 5TDC NMM ILE PHE SER 2.63158
5 1NJJ GET 2.89855
6 5TQZ GLC 3.33333
7 1V6A TRE 3.38164
8 3KN5 ANP 3.86473
9 1PTR PRB 4
10 1QF9 C5P 4.12371
11 1QF9 ALF 4.12371
12 1QF9 ADP 4.12371
13 5LJW ANP 4.34783
14 6GSG RCO 4.83092
15 3FQ8 PMP 4.83092
16 1LNX URI 4.93827
17 3KIH GDL 5.15464
18 1GVF PGH 5.31401
19 1XEX ATP 5.49451
20 4Z7X 3CX 5.7971
21 2HIM ASN 6.76329
22 1VBO MAN MAN MAN 8.05369
23 3QH2 3NM 10.1449
24 5A7Y SAH 10.1449
25 2D7I NGA 11.5942
26 4URX HXY 48.6486
Pocket No.: 3; Query (leader) PDB : 1VG8; Ligand: GNP; Similar sites found with APoc: 21
This union binding pocket(no: 3) in the query (biounit: 1vg8.bio1) has 27 residues
No: Leader PDB Ligand Sequence Similarity
1 1P4V GLY 1.93237
2 4ZJS 4P0 1.93237
3 4G5H UD7 2.89855
4 5E5U MLI 2.89855
5 1UJ5 5RP 2.89855
6 4UOX PLP 3.38164
7 4CTA ATP 3.38164
8 3ENV ABF 4.34783
9 1LES GLC FRU 4.41989
10 1MLY ACZ PLP 5.31401
11 1M0S CIT 5.31401
12 2QQ0 ANP 5.43478
13 2QQ0 ADP 5.43478
14 2QQ0 TMP 5.43478
15 3KIF GDL 5.66038
16 2R4V GSH 5.7971
17 2QLU ADE 6.76329
18 3UW4 MAA CHG PRO 0DQ 7.6087
19 5L3S G 8.21256
20 4E3Q PMP 9.17874
21 1LOB MMA 19.2308
Pocket No.: 4; Query (leader) PDB : 1VG8; Ligand: GNP; Similar sites found with APoc: 3
This union binding pocket(no: 4) in the query (biounit: 1vg8.bio4) has 27 residues
No: Leader PDB Ligand Sequence Similarity
1 5NGZ 2BG 2.53807
2 5A9A UTP 3.86473
3 2GNK ATP 5.35714
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