Receptor
PDB id Resolution Class Description Source Keywords
1VBO 2.35 Å NON-ENZYME: BINDING CRYSTAL STRUCTURE OF ARTOCARPIN-MANNOTRIOSE COMPLEX ARTOCARPUS INTEGER BETA-PRISM MANNOSE-SPECIFIC LECTIN JACALIN-LIKE PLANT PROTEIN
Ref.: STRUCTURAL BASIS FOR THE CARBOHYDRATE SPECIFICITIES OF ARTOCARPIN: VARIATION IN THE LENGTH OF A LOOP AS A STRATEGY FOR GENERATING LIGAND SPECIFICITY J.MOL.BIOL. V. 338 757 2004
Ligand
Ligand Chain:Residue Validity Ligand Warnings Binding Data NGL Viewer Molecular Weight (Da) Formula SMILES
MAN D:1405;
F:2405;
Valid;
Valid;
none;
none;
submit data
180.156 C6 H12 O6 C([C@...
MAN MAN MAN A:405;
B:405;
C:405;
E:405;
G:405;
H:405;
Valid;
Valid;
Valid;
Valid;
Valid;
Valid;
none;
none;
none;
none;
none;
none;
submit data
504.438 n/a O1C(O...
View in 3D viewer
90% Homology Family
Leader
PDB id Resolution Class Description Source Keywords
1VBO 2.35 Å NON-ENZYME: BINDING CRYSTAL STRUCTURE OF ARTOCARPIN-MANNOTRIOSE COMPLEX ARTOCARPUS INTEGER BETA-PRISM MANNOSE-SPECIFIC LECTIN JACALIN-LIKE PLANT PROTEIN
Ref.: STRUCTURAL BASIS FOR THE CARBOHYDRATE SPECIFICITIES OF ARTOCARPIN: VARIATION IN THE LENGTH OF A LOOP AS A STRATEGY FOR GENERATING LIGAND SPECIFICITY J.MOL.BIOL. V. 338 757 2004
Members (1)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 473 families.
1 1VBO - MAN MAN MAN n/a n/a
70% Homology Family (1)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 355 families.
1 1VBO - MAN MAN MAN n/a n/a
50% Homology Family (1)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 272 families.
1 1VBO - MAN MAN MAN n/a n/a
Polypharmacology
Similar Ligands
Ligand no: 1; Ligand: MAN; Similar ligands found: 141
No: Ligand ECFP6 Tc MDL keys Tc
1 GAL 1 1
2 BMA 1 1
3 GXL 1 1
4 GLA 1 1
5 ALL 1 1
6 GLC 1 1
7 BGC 1 1
8 GIV 1 1
9 MAN 1 1
10 WOO 1 1
11 32O 0.653846 0.866667
12 RIB 0.653846 0.866667
13 FUB 0.653846 0.866667
14 Z6J 0.653846 0.866667
15 AHR 0.653846 0.866667
16 BMA BMA MAN 0.545455 0.823529
17 GLA BGC 0.511628 0.848485
18 LAK 0.511628 0.848485
19 BGC GLA 0.511628 0.848485
20 GLA BMA 0.511628 0.848485
21 MAN BMA 0.511628 0.848485
22 GLA GLC 0.511628 0.848485
23 GAL GAL 0.511628 0.848485
24 MLB 0.511628 0.848485
25 BMA GLA 0.511628 0.848485
26 BMA BMA BMA BMA BMA BMA MAN 0.5 0.823529
27 YDR 0.5 0.8
28 MAN BMA BMA BMA BMA BMA 0.5 0.823529
29 GLC GLC GLC GLC BGC 0.488889 0.848485
30 GLC GLC GLC 0.488889 0.848485
31 MAN MAN MAN 0.488889 0.848485
32 GLC GLC GLC GLC GLC BGC 0.488889 0.848485
33 BGP 0.461538 0.675
34 G6P 0.461538 0.675
35 M6P 0.461538 0.675
36 A6P 0.461538 0.675
37 M6D 0.461538 0.675
38 BG6 0.461538 0.675
39 SHG 0.457143 0.875
40 GAF 0.457143 0.875
41 G2F 0.457143 0.875
42 X6X 0.457143 0.777778
43 2FG 0.457143 0.875
44 G3F 0.457143 0.875
45 PA1 0.457143 0.777778
46 1GN 0.457143 0.777778
47 GCS 0.457143 0.777778
48 2H5 0.457143 0.875
49 LB2 0.454545 0.848485
50 BGC BMA 0.454545 0.848485
51 BGC GAL 0.454545 0.848485
52 MAL 0.454545 0.848485
53 GLC GAL 0.454545 0.848485
54 M3M 0.454545 0.848485
55 GLA GAL 0.454545 0.848485
56 MAB 0.454545 0.848485
57 GLC BGC 0.454545 0.848485
58 BMA BMA 0.454545 0.848485
59 LBT 0.454545 0.848485
60 MAL MAL 0.454545 0.823529
61 CBK 0.454545 0.848485
62 GLA GLA 0.454545 0.848485
63 MAN GLC 0.454545 0.848485
64 CBI 0.454545 0.848485
65 N9S 0.454545 0.848485
66 GAL GLC 0.454545 0.848485
67 BMA GAL 0.454545 0.848485
68 B2G 0.454545 0.848485
69 BGC GLC 0.454545 0.848485
70 LAT 0.454545 0.848485
71 GAL BGC 0.454545 0.848485
72 3MG 0.444444 0.875
73 TCB 0.444444 0.8
74 GLC SGC 0.444444 0.8
75 YIO 0.441176 0.870968
76 2GS 0.432432 0.875
77 BGC BGC 0.431818 0.848485
78 2M4 0.431818 0.848485
79 MAN MAN 0.431818 0.848485
80 AHR AHR 0.428571 0.764706
81 GLF 0.428571 0.84375
82 FUB AHR 0.428571 0.764706
83 CT3 0.416667 0.848485
84 GLC BGC GLC 0.416667 0.848485
85 MLR 0.416667 0.848485
86 GLC GLC GLC GLC GLC GLC GLC 0.416667 0.848485
87 GLC GLC GLC GLC GLC 0.416667 0.848485
88 GAL FUC 0.416667 0.848485
89 BMA BMA BMA 0.416667 0.848485
90 CTR 0.416667 0.848485
91 BGC GLC GLC 0.416667 0.848485
92 BGC GLC GLC GLC GLC 0.416667 0.848485
93 MAN MAN BMA BMA BMA BMA 0.416667 0.848485
94 GLC GAL GAL 0.416667 0.848485
95 B4G 0.416667 0.848485
96 CEX 0.416667 0.848485
97 MAN BMA BMA BMA BMA 0.416667 0.848485
98 BMA BMA BMA BMA BMA 0.416667 0.848485
99 GLC BGC BGC BGC BGC BGC 0.416667 0.848485
100 CTT 0.416667 0.848485
101 GLC GLC BGC 0.416667 0.848485
102 DXI 0.416667 0.848485
103 GLC GLC BGC GLC GLC GLC GLC 0.416667 0.848485
104 BGC GLC GLC GLC 0.416667 0.848485
105 BGC BGC BGC GLC 0.416667 0.848485
106 BGC BGC BGC BGC BGC BGC 0.416667 0.848485
107 BMA BMA BMA BMA BMA BMA 0.416667 0.848485
108 MTT 0.416667 0.848485
109 BMA MAN BMA 0.416667 0.848485
110 BGC GLC GLC GLC GLC GLC GLC 0.416667 0.848485
111 CE5 0.416667 0.848485
112 GAL GAL GAL 0.416667 0.848485
113 BGC BGC BGC BGC BGC BGC BGC BGC BGC 0.416667 0.848485
114 GLC GLC GLC GLC GLC GLC GLC GLC GLC 0.416667 0.848485
115 GLA GAL GLC 0.416667 0.848485
116 CE6 0.416667 0.848485
117 GLC BGC BGC BGC BGC 0.416667 0.848485
118 GLC BGC BGC 0.416667 0.848485
119 MAN BMA BMA 0.416667 0.848485
120 MT7 0.416667 0.848485
121 GLC GLC GLC GLC GLC GLC GLC GLC 0.416667 0.848485
122 CE8 0.416667 0.848485
123 CEY 0.416667 0.848485
124 BGC BGC BGC 0.408163 0.848485
125 BGC BGC BGC BGC BGC 0.408163 0.848485
126 GLC BGC BGC BGC BGC BGC BGC 0.408163 0.848485
127 SGC SGC BGC 0.408163 0.8
128 GLC BGC BGC BGC 0.408163 0.848485
129 BGC BGC BGC ASO BGC BGC ASO 0.408163 0.848485
130 BGC BGC BGC GLC BGC BGC 0.408163 0.848485
131 TRE 0.405405 0.848485
132 1LL 0.405405 0.771429
133 TDG 0.405405 0.771429
134 BM3 0.404762 0.7
135 NDG 0.404762 0.7
136 NAG 0.404762 0.7
137 HSQ 0.404762 0.7
138 A2G 0.404762 0.7
139 NGA 0.404762 0.7
140 FUB AHR AHR 0.4 0.764706
141 AHR AHR AHR 0.4 0.764706
Ligand no: 2; Ligand: MAN MAN MAN; Similar ligands found: 169
No: Ligand ECFP6 Tc MDL keys Tc
1 GLC GLC GLC GLC GLC BGC 1 1
2 GLC GLC GLC 1 1
3 MAN MAN MAN 1 1
4 GLC GLC GLC GLC BGC 1 1
5 MLB 0.953488 1
6 MAN BMA 0.953488 1
7 GLA GLC 0.953488 1
8 BMA GLA 0.953488 1
9 BGC GLA 0.953488 1
10 LAK 0.953488 1
11 GAL GAL 0.953488 1
12 GLA BGC 0.953488 1
13 GLA BMA 0.953488 1
14 AHR AHR AHR 0.744681 0.857143
15 FUB AHR AHR 0.744681 0.857143
16 MAN MAN MAN MAN 0.736842 1
17 MAN MAN BMA MAN 0.736842 1
18 FUB AHR 0.717391 0.857143
19 AHR AHR 0.717391 0.857143
20 GLC GLC GLC GLC 0.684211 1
21 MAN MMA 0.666667 0.942857
22 GLC GLC GLC GLC GLC GLC 0.661017 1
23 GLC GLC GLC BGC 0.639344 1
24 M5S 0.612903 1
25 MAN BMA MAN MAN MAN 0.612903 1
26 MAN MAN MAN BMA MAN 0.58209 1
27 BMA BMA GLA BMA BMA 0.530303 1
28 MAN MMA MAN 0.52381 0.942857
29 FRU GLC GLA 0.523077 0.891892
30 RAF 0.523077 0.891892
31 MAN MAN MAN BMA MAN MAN MAN 0.506494 0.942857
32 NGB 0.492754 0.622642
33 GLA 0.488889 0.848485
34 BGC 0.488889 0.848485
35 MAN 0.488889 0.848485
36 ALL 0.488889 0.848485
37 GIV 0.488889 0.848485
38 BMA 0.488889 0.848485
39 GXL 0.488889 0.848485
40 GLC 0.488889 0.848485
41 WOO 0.488889 0.848485
42 GAL 0.488889 0.848485
43 SUC GLA 0.478873 0.891892
44 MAN H1M MAN 0.478261 0.868421
45 BMA BMA MAN 0.474576 0.970588
46 4CQ 0.46875 0.970588
47 WZ2 0.463768 0.868421
48 NAG MAN BMA 0.459459 0.733333
49 NAG MAN MAN 0.459459 0.733333
50 GAL GLC 0.45614 1
51 BGC GLC 0.45614 1
52 CBI 0.45614 1
53 MAL 0.45614 1
54 LAT 0.45614 1
55 LBT 0.45614 1
56 BGC GAL 0.45614 1
57 N9S 0.45614 1
58 B2G 0.45614 1
59 MAL MAL 0.45614 0.970588
60 MAB 0.45614 1
61 BMA GAL 0.45614 1
62 GAL BGC 0.45614 1
63 GLC BGC 0.45614 1
64 GLA GAL 0.45614 1
65 CBK 0.45614 1
66 GLC GAL 0.45614 1
67 BGC BMA 0.45614 1
68 GLA GLA 0.45614 1
69 BMA BMA 0.45614 1
70 RGG 0.454545 0.882353
71 WZ3 0.450704 0.916667
72 DEG 0.446429 0.769231
73 ACY 1GN GAL 1GN BGC ACY GAL BGC 0.445783 0.6875
74 1GN ACY GAL ACY 1GN BGC GAL BGC 0.445783 0.6875
75 DMJ MAN 0.444444 0.727273
76 BMA BMA BMA BMA BMA BMA MAN 0.444444 0.970588
77 MAN BMA BMA BMA BMA BMA 0.444444 0.970588
78 NAG BMA MAN MAN MAN MAN 0.444444 0.733333
79 NOJ BGC 0.444444 0.727273
80 GLC BGC BGC BGC XYS BGC XYS XYS 0.4375 0.916667
81 IFM MAN 0.4375 0.744186
82 M6D 0.433962 0.674419
83 G6P 0.433962 0.674419
84 BG6 0.433962 0.674419
85 M6P 0.433962 0.674419
86 A6P 0.433962 0.674419
87 BGP 0.433962 0.674419
88 DGD 0.433735 0.733333
89 LB2 0.431034 1
90 MAN GLC 0.431034 1
91 M3M 0.431034 1
92 EBQ 0.431034 0.837838
93 EBG 0.431034 0.837838
94 BGC BGC XYS BGC 0.426667 0.942857
95 CT3 0.42623 1
96 MLR 0.42623 1
97 GLC GLC BGC GLC GLC GLC GLC 0.42623 1
98 CEY 0.42623 1
99 GLC BGC GLC 0.42623 1
100 GLC GAL GAL 0.42623 1
101 GLC GLC GLC GLC GLC GLC GLC GLC 0.42623 1
102 GLC GLC BGC 0.42623 1
103 GLC GLC GLC GLC GLC GLC GLC 0.42623 1
104 BGC GLC GLC GLC GLC 0.42623 1
105 MAN MAN BMA BMA BMA BMA 0.42623 1
106 B4G 0.42623 1
107 MAN BMA BMA BMA BMA 0.42623 1
108 CEX 0.42623 1
109 BMA BMA BMA BMA BMA 0.42623 1
110 DXI 0.42623 1
111 GLC BGC BGC BGC BGC BGC 0.42623 1
112 CTT 0.42623 1
113 CTR 0.42623 1
114 BMA BMA BMA 0.42623 1
115 GLC GLC GLC GLC GLC 0.42623 1
116 BGC GLC GLC 0.42623 1
117 GLC BGC BGC 0.42623 1
118 MAN BMA BMA 0.42623 1
119 MTT 0.42623 1
120 BMA BMA BMA BMA BMA BMA 0.42623 1
121 BGC GLC GLC GLC GLC GLC GLC 0.42623 1
122 CE5 0.42623 1
123 BMA MAN BMA 0.42623 1
124 BGC GLC GLC GLC 0.42623 1
125 GLA GAL GLC 0.42623 1
126 GAL GAL GAL 0.42623 1
127 CE6 0.42623 1
128 GLC BGC BGC BGC BGC 0.42623 1
129 BGC BGC BGC BGC BGC BGC 0.42623 1
130 GLC GLC GLC GLC GLC GLC GLC GLC GLC 0.42623 1
131 BGC BGC BGC BGC BGC BGC BGC BGC BGC 0.42623 1
132 MT7 0.42623 1
133 BGC BGC BGC GLC 0.42623 1
134 CE8 0.42623 1
135 HEX GLC 0.423729 0.714286
136 BHG 0.423729 0.714286
137 GLC HEX 0.423729 0.714286
138 JZR 0.423729 0.714286
139 TRE 0.42 1
140 WZ5 0.418605 0.702128
141 GAL GAL SO4 0.41791 0.702128
142 KGM 0.416667 0.738095
143 B7G 0.416667 0.738095
144 BMA NAG MAN MAN MAN MAN MAN MAN MAN 0.41573 0.733333
145 BGC BGC 0.413793 1
146 2M4 0.413793 1
147 MAN MAN 0.413793 1
148 MMA 0.411765 0.857143
149 AMG 0.411765 0.857143
150 MBG 0.411765 0.857143
151 GYP 0.411765 0.857143
152 GLC BGC BGC XYS BGC XYS XYS 0.410256 0.942857
153 BGC BGC BGC XYS BGC XYS XYS 0.410256 0.942857
154 BGC BGC XYS BGC XYS BGC XYS 0.410256 0.942857
155 SER MAN 0.409836 0.775
156 BOG 0.409836 0.738095
157 BNG 0.409836 0.738095
158 HSJ 0.409836 0.738095
159 GLC GLC XYS XYS 0.408451 0.914286
160 GL1 0.407407 0.697674
161 M1P 0.407407 0.697674
162 XGP 0.407407 0.697674
163 G1P 0.407407 0.697674
164 6SA 0.40625 0.733333
165 AXR BXY BXY BXX 0.405405 0.789474
166 NAG BMA MAN MAN MAN MAN MAN 0.405063 0.868421
167 GAL FUC 0.403226 0.941176
168 GAL BGC NAG GAL 0.402597 0.733333
169 GAL BGC BGC XYS 0.4 0.942857
Similar Binding Sites (Proteins are less than 50% similar to leader)
Pocket No.: 1; Query (leader) PDB : 1VBO; Ligand: MAN MAN MAN; Similar sites found: 190
This union binding pocket(no: 1) in the query (biounit: 1vbo.bio2) has 11 residues
No: Leader PDB Ligand P-value (APoc) PS_Score (APoc) Sequence Similarity
1 1I58 ACP 0.01337 0.4191 None
2 1VPM COA 0.04156 0.40183 None
3 2AG5 NAD 0.03935 0.40032 None
4 3HZS M0E 0.01819 0.42059 1.34228
5 3OEN GLU 0.007409 0.42008 1.34228
6 1MO9 FAD 0.03664 0.43303 2.01342
7 5EOU ATP 0.009047 0.43006 2.01342
8 3A7R LAQ 0.01686 0.42442 2.01342
9 1Z6Z NAP 0.01659 0.42255 2.01342
10 5AR0 GB8 0.001258 0.48183 2.68456
11 1IY8 NAD 0.02637 0.41473 2.68456
12 5T9E NAP 0.02759 0.40748 2.68456
13 2DUR MAN MAN 0.005908 0.40493 2.68456
14 1LFD GNP 0.04209 0.40184 2.68456
15 5ITV NAI 0.0458 0.40456 2.7451
16 4REP FAD 0.03853 0.41706 3.3557
17 1V59 FAD 0.03516 0.4154 3.3557
18 1PZO CBT 0.02926 0.41347 3.3557
19 1NV8 MEQ 0.02921 0.40926 3.3557
20 1NV8 SAM 0.03067 0.40926 3.3557
21 3SM2 478 0.02681 0.40856 3.3557
22 2DKN NAI 0.03924 0.40563 3.3557
23 4I42 1HA 0.03562 0.40394 3.3557
24 4JEJ 1GP 0.01404 0.40192 3.3557
25 1WK9 TSB 0.004419 0.43184 3.42466
26 5HES 032 0.007867 0.42985 4.02685
27 1SW0 PGA 0.01136 0.4155 4.02685
28 5DJH AMP 0.01718 0.40729 4.02685
29 3K56 IS3 0.03895 0.40453 4.02685
30 3BY8 MLT 0.00824 0.40443 4.02685
31 3LE7 ADE 0.006625 0.40115 4.02685
32 2W2X GSP 0.02798 0.40551 4.32432
33 1P0Z FLC 0.009526 0.41136 4.58015
34 2X6T NAP 0.00217 0.47914 4.69799
35 3Q9T FAY 0.01292 0.44339 4.69799
36 1F0X FAD 0.01113 0.44131 4.69799
37 1EQ2 NAP 0.008551 0.44084 4.69799
38 2C7G FAD 0.02595 0.43713 4.69799
39 2C7G ODP 0.0253 0.43713 4.69799
40 4O33 3PG 0.0271 0.42936 4.69799
41 4O33 TZN 0.0271 0.42936 4.69799
42 4Y2H 49K 0.03798 0.41542 4.69799
43 2X61 NGA GAL SIA 0.01697 0.41431 4.69799
44 3HAD NAD 0.04783 0.41294 4.69799
45 3C1O NAP 0.02423 0.41008 4.69799
46 1RO7 CSF 0.01975 0.40993 4.69799
47 4Y2H SAH 0.04536 0.40948 4.69799
48 3AKK ADP 0.01677 0.40921 4.69799
49 3ZNR NU9 0.02194 0.40424 4.69799
50 2C94 TSF 0.04718 0.40272 4.69799
51 2EFE GNH 0.02961 0.40175 4.69799
52 2GKS ADP 0.02814 0.40158 4.69799
53 3K87 FAD 0.04865 0.40142 4.69799
54 3IWK NAD 0.02549 0.40069 4.69799
55 1EZ0 NAP 0.03693 0.40046 4.69799
56 3OTX AP5 0.006944 0.44994 5.36913
57 1U7T TDT 0.01226 0.44102 5.36913
58 2WEI VGG 0.005232 0.43187 5.36913
59 1ZOA 140 0.01858 0.42666 5.36913
60 1ELI PYC 0.01669 0.42659 5.36913
61 1U7T NAD 0.02174 0.41829 5.36913
62 1ELU CSS 0.023 0.4104 5.36913
63 2X06 NAD 0.03615 0.4087 5.36913
64 1PHP ADP 0.0295 0.40517 5.36913
65 1OFD FMN 0.03021 0.40392 5.36913
66 1OFD AKG 0.02786 0.40392 5.36913
67 3KJS NAP 0.04039 0.4023 5.36913
68 2XVE FAD 0.02371 0.442 6.04027
69 2JFN GLU 0.003909 0.43436 6.04027
70 3WBF NAP 0.015 0.4241 6.04027
71 4FBL SPD 0.007763 0.41793 6.04027
72 3KDM TES 0.005051 0.41755 6.04027
73 1VJY 460 0.01816 0.41356 6.04027
74 3WBF API 0.03652 0.40988 6.04027
75 1LYX PGA 0.01659 0.40763 6.04027
76 3JYN NDP 0.04503 0.40512 6.04027
77 4GAH 0ET 0.02947 0.40353 6.04027
78 2BTO GTP 0.02964 0.40142 6.48148
79 4F4P 0SB 0.003973 0.47427 6.71141
80 4WAS NAP 0.0131 0.43924 6.71141
81 3TWO NDP 0.01774 0.42954 6.71141
82 3DNT ATP 0.008604 0.42933 6.71141
83 5DX1 SFG 0.02351 0.41541 6.71141
84 5DX0 SFG 0.0248 0.41467 6.71141
85 1GPM CIT 0.006949 0.41435 6.71141
86 5DWQ SFG 0.02494 0.4121 6.71141
87 4J7U NAP 0.03845 0.41101 6.71141
88 4J7U YTZ 0.03845 0.41101 6.71141
89 5MDH NAD 0.02348 0.40852 6.71141
90 1SOW NAD 0.04472 0.40422 6.71141
91 1APZ ASP 0.01383 0.40189 6.71141
92 3CQD ATP 0.04297 0.40099 6.71141
93 1QPG MAP 0.03666 0.4007 6.71141
94 4MXP DB4 0.01711 0.40032 6.71141
95 2VGD XYP XYP 0.009059 0.40205 6.88073
96 1DJN ADP 0.003041 0.45559 7.38255
97 2Q7V FAD 0.007835 0.45289 7.38255
98 1VPE ANP 0.004169 0.44772 7.38255
99 1O94 ADP 0.00481 0.44475 7.38255
100 3RFV NAI 0.02188 0.41021 7.38255
101 1WK8 VMS 0.01211 0.40456 7.73196
102 4LNU GTP 0.001713 0.47965 8.05369
103 4LNU GDP 0.002418 0.46125 8.05369
104 3RYC GDP 0.003423 0.45449 8.05369
105 3RYC GTP 0.00657 0.44548 8.05369
106 4USF 6UI 0.008077 0.42018 8.05369
107 4YNU LGC 0.04323 0.41685 8.05369
108 4USQ FAD 0.04069 0.41179 8.05369
109 2F2L MLD 0.04162 0.4092 8.05369
110 2XVF FAD 0.04051 0.40802 8.05369
111 2GSD NAD 0.0352 0.40683 8.05369
112 2V7Y ADP 0.01903 0.40525 8.05369
113 1N2X SAM 0.02297 0.40521 8.05369
114 1YBH P22 0.03344 0.40364 8.05369
115 4A1O JLN 0.0317 0.4027 8.05369
116 4NTK ZSP 0.02538 0.40337 8.26446
117 1ZOS MTM 0.02463 0.40197 8.69565
118 5CGE 51F 0.002026 0.44173 8.72483
119 1U7Z PMT 0.0144 0.43131 8.72483
120 2Q2V NAD 0.02629 0.41117 8.72483
121 2EW1 GNP 0.03051 0.40213 8.72483
122 3DDC GNP 0.04267 0.40051 8.72483
123 3QFU ADP 0.002533 0.45766 9.39597
124 1I8T FAD 0.02415 0.42197 9.39597
125 4RJK TPP 0.01802 0.42118 9.39597
126 1F06 NDP 0.02431 0.41752 9.39597
127 1F06 2NP 0.02431 0.41752 9.39597
128 4DP3 MMV 0.04105 0.41398 9.39597
129 4RJK TDL 0.02924 0.41058 9.39597
130 1D4D FAD 0.04456 0.40683 9.39597
131 1UMD TDP COI 0.03177 0.40232 9.39597
132 4CQM NAP 0.04501 0.4016 9.39597
133 5A1S FLC 0.01094 0.40832 10.0671
134 2NAD NAD 0.03655 0.40702 10.0671
135 4L2H AR6 AR6 0.03509 0.40674 10.0671
136 4A0M NAD 0.04248 0.40515 10.0671
137 2AJH MET 0.008218 0.40437 10.0671
138 1XKQ NDP 0.04868 0.40172 10.0671
139 5EYP GTP 0.0007681 0.49939 10.7383
140 5EYP GDP 0.002362 0.47021 10.7383
141 1ZGA SAH 0.01865 0.40739 10.7383
142 4R6W SAH 0.03965 0.4043 10.7383
143 1NVV GNP 0.04186 0.4013 10.7383
144 2GV8 FAD 0.01328 0.44133 12.0805
145 1U2Z SAH 0.007038 0.43208 12.0805
146 3HDY GDU 0.03873 0.42375 12.0805
147 3HDY FDA 0.0379 0.42375 12.0805
148 5T8U LPA 0.007135 0.41987 12.0805
149 1YB5 NAP 0.01902 0.42915 12.7517
150 4RGQ 13P 0.03243 0.4215 12.7517
151 4LRZ ADP 0.02239 0.40783 12.7517
152 4O9C COA 0.02098 0.40286 12.7517
153 2Y5D NAP 0.01111 0.43196 13.4228
154 1YP4 ADP 0.006096 0.42478 13.4228
155 3AY6 NAI 0.02597 0.41769 13.4228
156 2J9C ATP 0.03732 0.40552 13.4454
157 2IVF MGD 0.04759 0.40638 14.0187
158 5G5G FAD 0.04812 0.40277 14.094
159 2FHF GLC GLC GLC GLC 0.03577 0.40241 14.094
160 3S1S SAH 0.03568 0.40006 14.094
161 3T3C 017 0.01465 0.41821 14.1414
162 4K49 HFQ 0.02409 0.41905 14.7059
163 1M7Y PPG 0.03267 0.4025 14.7651
164 1Y7P RIP 0.01147 0.4019 14.7651
165 3ZBQ GDP 0.003784 0.44206 15.4362
166 4HXY NDP 0.03633 0.40929 16.1074
167 4JAL SAH 0.01908 0.40729 16.1074
168 3NZW BOC TY5 ALA RE0 ABN 0.004874 0.43871 16.7785
169 2BJU IH4 0.019 0.40896 16.7785
170 3S43 478 0.03068 0.40106 17.1717
171 4ZNO SUC 0.000001278 0.60566 17.4497
172 5IXJ THR 0.01728 0.42501 18.7919
173 3VBK COA 0.03865 0.40808 19.4631
174 3VBK 0FX 0.04919 0.40794 19.4631
175 4HDQ GNP 0.03979 0.40245 20.1342
176 1BXG NAD 0.02565 0.41049 21.4765
177 4ANW O92 0.0147 0.43248 23.4899
178 3RNM FAD 0.04126 0.41266 24.1379
179 3LL2 MAN MAN MAN MAN MAN MAN MAN MAN 0.00001892 0.56437 24.3902
180 2GUC MAN 0.00000001359 0.73339 24.5902
181 2NU5 NAG 0.00000001584 0.72782 24.5902
182 2GUE NAG 0.0000000326 0.67127 24.5902
183 2HYR BGC GLC 0.00000001325 0.59591 24.5902
184 2GUD MAN 0.00000001449 0.59424 24.5902
185 2GUD BMA 0.00000007028 0.56327 24.5902
186 2NUO BGC 0.0000001046 0.55869 24.5902
187 2HYQ MAN MAN 0.0000006481 0.55708 24.5902
188 3VY6 BGC BGC 0.0000001444 0.54973 24.8227
189 3R51 MMA 0.001658 0.4105 24.8322
190 1ON3 MCA 0.02928 0.40122 26.8456
Pocket No.: 2; Query (leader) PDB : 1VBO; Ligand: MAN; Similar sites found: 124
This union binding pocket(no: 2) in the query (biounit: 1vbo.bio2) has 10 residues
No: Leader PDB Ligand P-value (APoc) PS_Score (APoc) Sequence Similarity
1 1I58 ACP 0.01122 0.42054 None
2 3OEN GLU 0.00646 0.42366 1.34228
3 2FAV APR 0.01169 0.42669 2.01342
4 5AR0 GB8 0.008811 0.42804 2.68456
5 4CS4 AXZ 0.03882 0.40724 2.68456
6 4CS4 ANP 0.03193 0.40724 2.68456
7 1IY8 NAD 0.03493 0.40628 2.68456
8 2DUR MAN MAN 0.007053 0.40176 2.68456
9 2I6A 5I5 0.02577 0.40117 2.68456
10 1NV8 SAM 0.008164 0.42573 3.3557
11 4E93 GUI 0.02108 0.42421 3.3557
12 1TD2 PXL 0.01354 0.40354 3.3557
13 5HES 032 0.00824 0.42746 4.02685
14 4KVG GTP 0.01297 0.41958 4.02685
15 1FEC FAD 0.02811 0.41905 4.02685
16 3IP8 B85 0.00714 0.41585 4.02685
17 2PK3 A2R 0.01868 0.40845 4.02685
18 4POO SAM 0.01847 0.40794 4.02685
19 2ZXG S23 0.04889 0.40362 4.02685
20 3AI8 HNQ 0.01299 0.40314 4.02685
21 3BY8 MLT 0.006447 0.40178 4.02685
22 1UAD GNP 0.005894 0.44271 4.0404
23 2W2X GSP 0.02421 0.40232 4.32432
24 1P0Z FLC 0.01284 0.40375 4.58015
25 1L3I SAH 0.01316 0.42092 4.6875
26 2X6T NAP 0.001637 0.48383 4.69799
27 1EQ2 NAP 0.00645 0.43898 4.69799
28 1DLJ NAI 0.04454 0.42426 4.69799
29 4EHU ANP 0.01049 0.41606 4.69799
30 4TQG NDP 0.03525 0.41257 4.69799
31 3C6K SPD 0.03573 0.4095 4.69799
32 3C6K MTA 0.03573 0.4095 4.69799
33 2RGO FAD 0.04752 0.40573 4.69799
34 1XHL NDP 0.03976 0.40035 4.69799
35 3BXF 13P 0.01825 0.40105 4.70588
36 1IBR GNP 0.004034 0.45083 5.36913
37 3OTX AP5 0.007671 0.44406 5.36913
38 4HAT GNP 0.006232 0.43898 5.36913
39 5UWP GNP 0.007361 0.43422 5.36913
40 5UWI GNP 0.007622 0.43173 5.36913
41 1T26 NAI 0.02165 0.43033 5.36913
42 1ELI PYC 0.01131 0.42539 5.36913
43 1OFD AKG 0.02031 0.41564 5.36913
44 1OFD FMN 0.02202 0.41564 5.36913
45 4PLG NAI 0.03951 0.40822 5.36913
46 4N49 SAM 0.03155 0.4065 5.36913
47 2WEI VGG 0.01021 0.40524 5.36913
48 3WBF NAP 0.005339 0.44345 6.04027
49 1V3S ATP 0.004355 0.44215 6.04027
50 2JFN GLU 0.002464 0.44135 6.04027
51 1PNO NAP 0.008433 0.43638 6.04027
52 3WBF API 0.01971 0.4223 6.04027
53 2IV3 UDP 0.02361 0.41266 6.04027
54 5X8G S0N 0.02777 0.43038 6.71141
55 4GJ3 0XP 0.02056 0.41888 6.71141
56 1SOW NAD 0.02946 0.41119 6.71141
57 1ZC3 GNP 0.01035 0.42649 7.07965
58 3RFV NAI 0.01144 0.42257 7.38255
59 4G2R H1L 0.02135 0.4119 7.38255
60 3QVP FAD 0.03619 0.41079 7.38255
61 1W5F G2P 0.02473 0.40636 7.38255
62 3HRD FAD 0.04038 0.40382 7.38255
63 3RFV 15L 0.03021 0.40362 7.38255
64 1VPE ANP 0.02334 0.40053 7.38255
65 3RYC GTP 0.003264 0.46155 8.05369
66 4LNU GDP 0.002674 0.45475 8.05369
67 3RYC GDP 0.002978 0.44925 8.05369
68 3WQT ANP 0.003458 0.44605 8.05369
69 4A1O JLN 0.02067 0.40987 8.05369
70 1K3A ACP 0.01717 0.4034 8.05369
71 1CXZ GSP 0.02336 0.40413 8.13953
72 3GJX GTP 0.009074 0.42761 8.72483
73 1FFU FAD 0.02065 0.41934 8.72483
74 1VRP ADP 0.01089 0.41448 8.72483
75 3TKY SAH 0.02254 0.40438 8.72483
76 4USI ATP 0.02392 0.40205 8.72483
77 4C3Y ANB 0.02 0.41949 9.39597
78 4CQM NAP 0.0287 0.4125 9.39597
79 4IQY AR6 0.01869 0.40988 9.39597
80 3CB2 GDP 0.004978 0.43604 10.0671
81 1GR0 NAD 0.01882 0.42022 10.0671
82 5A1S FLC 0.005679 0.41636 10.0671
83 3WWX DIA 0.007463 0.41046 10.0671
84 4UIN QI9 0.01221 0.40323 10.0671
85 1Q0S SAH 0.02772 0.40068 10.0671
86 5EYP GTP 0.000601 0.50304 10.7383
87 4X1Z FUC GAL NDG 0.001931 0.43352 12.0805
88 1U2Z SAH 0.01435 0.41495 12.0805
89 5T8U LPA 0.01053 0.40706 12.0805
90 4G4S LDZ 0.009205 0.40605 12.0805
91 1YB5 NAP 0.02518 0.42039 12.7517
92 3TNF GNP 0.02322 0.4058 12.7517
93 1U6R ADP 0.007463 0.42789 13.4228
94 2J9C ATP 0.0387 0.40058 13.4454
95 2IVF MGD 0.04841 0.40297 14.0187
96 5G5G MCN 0.01959 0.41952 14.094
97 5UKL SIX 0.01537 0.41963 14.5161
98 2NGR AF3 0.005312 0.42199 14.7651
99 1Y7P RIP 0.005421 0.4177 14.7651
100 1GRN AF3 0.008138 0.40937 14.7651
101 5M3E APR 0.005081 0.43704 15.4362
102 3ZBQ GDP 0.007027 0.4265 15.4362
103 2UZI GTP 0.01211 0.42409 15.4362
104 3QV1 NAD 0.04327 0.40077 15.8537
105 4JAL SAH 0.02594 0.40602 16.1074
106 3NZW BOC TY5 ALA RE0 ABN 0.002499 0.44936 16.7785
107 4ZNO SUC 0.000001723 0.58748 17.4497
108 1T3Q FAD 0.02814 0.41834 18.1208
109 5IXJ THR 0.005972 0.4533 18.7919
110 4HDQ GNP 0.002419 0.4668 20.1342
111 1RYA GDP 0.03172 0.40157 20.1342
112 5UWT GNP 0.005608 0.44085 21.7391
113 2GAG FOA 0.04104 0.4198 23.2323
114 3LL2 MAN MAN MAN MAN MAN MAN MAN MAN 0.000006911 0.59086 24.3902
115 2GUC MAN 0.00000002072 0.70492 24.5902
116 2NU5 NAG 0.00000002465 0.69872 24.5902
117 2GUD MAN 0.00000001872 0.6184 24.5902
118 2HYR BGC GLC 0.00000001996 0.61687 24.5902
119 2GUE NAG 0.00000005211 0.61603 24.5902
120 2GUD BMA 0.00000009702 0.57938 24.5902
121 2HYQ MAN MAN 0.0000007647 0.57497 24.5902
122 2NUO BGC 0.0000001516 0.57475 24.5902
123 3VY6 BGC BGC 0.0000002084 0.56289 24.8227
124 3R51 MMA 0.002265 0.40776 24.8322
Pocket No.: 3; Query (leader) PDB : 1VBO; Ligand: MAN MAN MAN; Similar sites found: 64
This union binding pocket(no: 3) in the query (biounit: 1vbo.bio2) has 11 residues
No: Leader PDB Ligand P-value (APoc) PS_Score (APoc) Sequence Similarity
1 2XTZ GSP 0.02861 0.40621 2.01342
2 2FAV APR 0.02688 0.40275 2.01342
3 2XVD AS6 0.04422 0.40041 2.68456
4 2WSB NAD 0.01963 0.4319 3.3557
5 5UR1 YY9 0.02191 0.41682 3.3557
6 1V2X SAM 0.01817 0.40895 3.3557
7 5JXZ ISC 0.01103 0.42216 4.02685
8 5JXZ ISJ 0.01103 0.42216 4.02685
9 2P2V CSF 0.01593 0.41097 4.02685
10 4KVG GTP 0.02397 0.4091 4.02685
11 3I5C C2E 0.01273 0.40169 4.02685
12 1UAD GNP 0.008033 0.43634 4.0404
13 1L3I SAH 0.007633 0.43969 4.6875
14 1XHL NDP 0.01553 0.44875 4.69799
15 5KF6 NAD 0.01369 0.43227 4.69799
16 4TXJ THM 0.01581 0.42457 4.69799
17 3RGA LSB 0.01623 0.41119 4.69799
18 3C6K SPD 0.03808 0.41044 4.69799
19 3C6K MTA 0.03808 0.41044 4.69799
20 2X61 CH 0.01135 0.40788 4.69799
21 2WQQ CSF 0.01556 0.40595 4.69799
22 1FIQ MTE 0.03868 0.40118 4.69799
23 1FIQ SAL 0.0422 0.40118 4.69799
24 4EHU ANP 0.02614 0.40024 4.69799
25 1IBR GNP 0.01143 0.42915 5.36913
26 5UWI GNP 0.02044 0.41306 5.36913
27 1V3S ATP 0.005937 0.43791 6.04027
28 3HZT J60 0.006829 0.42301 6.04027
29 3F4F UMP 0.01262 0.40979 6.04027
30 2IV3 UDP 0.03297 0.40302 6.04027
31 1D1T NAD 0.01775 0.42616 6.71141
32 4GOJ GNP 0.03395 0.40336 6.71141
33 2EV1 OLA 0.02617 0.40052 6.71141
34 1ZC3 GNP 0.02981 0.40574 7.07965
35 1O9J NAD 0.005096 0.45357 7.38255
36 3RFV 15L 0.01656 0.41592 7.38255
37 3WQT ANP 0.005296 0.43875 8.05369
38 2BL9 CP6 0.04084 0.40826 8.05369
39 2BUP ATP 0.02499 0.40462 8.05369
40 1J0D 5PA 0.03901 0.40443 8.05369
41 3KV8 FAH 0.02824 0.42695 8.63309
42 4M7V NAP 0.03829 0.40169 8.72483
43 2B8W ALF 5GP 0.008158 0.44246 9.39597
44 4XJ7 ADN 0.01043 0.40183 9.73783
45 3WWX DIA 0.009009 0.41001 10.0671
46 2PT9 2MH 0.02996 0.40861 10.0671
47 1GR0 NAD 0.04265 0.4035 10.0671
48 2WOX NDP 0.01871 0.42357 10.7383
49 1NVU GTP 0.01349 0.4235 10.7383
50 3M2W L8I 0.009302 0.41388 10.7383
51 4I8P NAD 0.005583 0.45417 11.4094
52 4DHY GLC 0.04134 0.40699 12.0805
53 3JDW ORN 0.009419 0.41707 12.7517
54 1Q8Y ADE 0.01297 0.40391 12.7517
55 1TAD GDP 0.03295 0.40711 13.4228
56 5G5G MCN 0.04113 0.40357 14.094
57 3KXC PLM 0.03111 0.40241 14.094
58 4FG8 ATP 0.02404 0.40115 16.1074
59 4YC7 GNP 0.02018 0.41021 17.4497
60 4PVV HO4 0.03924 0.40754 19.4631
61 4HDO GNP 0.02002 0.41844 20.1342
62 3PT9 SAH 0.02122 0.40361 21.4765
63 5UWT GNP 0.01615 0.4196 21.7391
64 4YZC STU 0.04762 0.40565 22.8188
Pocket No.: 4; Query (leader) PDB : 1VBO; Ligand: MAN MAN MAN; Similar sites found: 34
This union binding pocket(no: 4) in the query (biounit: 1vbo.bio2) has 11 residues
No: Leader PDB Ligand P-value (APoc) PS_Score (APoc) Sequence Similarity
1 1MO9 KPC 0.01545 0.45739 2.01342
2 2BRY FAD 0.04273 0.40052 2.68456
3 3ITJ FAD 0.01584 0.44231 3.3557
4 3LL9 ADP 0.01881 0.40642 3.3557
5 3D3W NAP 0.03821 0.40247 3.3557
6 2CB3 MLD 0.04241 0.40036 3.3557
7 1NJF AGS 0.02262 0.40116 4.02685
8 1YQZ FAD 0.0443 0.42313 4.69799
9 4PLG NAI 0.03648 0.41207 5.36913
10 3IX1 NFM 0.0117 0.40121 5.36913
11 2OOR TXP 0.01067 0.43168 6.04027
12 4ER2 IVA VAL VAL STA ALA STA 0.04935 0.40724 6.04027
13 2CWH NDP 0.04394 0.40269 6.41399
14 4GJ3 0XP 0.04235 0.40409 6.71141
15 1FL2 FAD 0.0125 0.44191 7.38255
16 3ZV6 4HB 0.03594 0.41233 7.38255
17 3ZV6 NAD 0.03481 0.41233 7.38255
18 4M38 SAH 0.0275 0.40027 7.38255
19 2VHW NAI 0.0263 0.41797 8.05369
20 4YNU FAD 0.03825 0.41703 8.05369
21 1VG8 GNP 0.02767 0.40796 8.05369
22 4UP3 FAD 0.01102 0.44887 8.72483
23 4USI ATP 0.01492 0.41661 8.72483
24 3F8D FAD 0.0226 0.4405 10.0671
25 1TDF NAP 0.03222 0.43186 10.7383
26 1TDF FAD 0.02383 0.42883 10.7383
27 2WME NAP 0.01898 0.40515 10.7383
28 2GVC FAD 0.03217 0.41927 12.0805
29 3E8N ATP 0.04994 0.41025 12.0805
30 1KOL NAD 0.03814 0.40765 13.4228
31 1U6R ADP 0.02285 0.4031 13.4228
32 5TDF 7A3 0.02717 0.40022 14.7651
33 2ZAT NAP 0.02579 0.41109 17.4497
34 5NUL FMN 0.01523 0.41231 19.5652
Pocket No.: 5; Query (leader) PDB : 1VBO; Ligand: MAN; Similar sites found: 50
This union binding pocket(no: 5) in the query (biounit: 1vbo.bio1) has 9 residues
No: Leader PDB Ligand P-value (APoc) PS_Score (APoc) Sequence Similarity
1 5WDR GNP 0.01779 0.41769 None
2 3A7R LAQ 0.01169 0.42395 2.01342
3 2BLE 5GP 0.00612 0.41804 2.01342
4 1LFD GNP 0.007032 0.45003 2.68456
5 2E5V FAD 0.0246 0.4181 2.68456
6 1P1C SAH 0.01541 0.41347 2.68456
7 1NV8 MEQ 0.00635 0.41823 3.3557
8 1P4V GLY 0.006925 0.41581 3.3557
9 1V2X SAM 0.01092 0.40042 3.3557
10 1DL5 SAH 0.01117 0.42813 4.02685
11 1SW0 PGA 0.005112 0.42101 4.02685
12 1I36 NAP 0.01967 0.40072 4.02685
13 5KF6 NAD 0.02712 0.42776 4.69799
14 2X61 CH 0.00351 0.42696 4.69799
15 3RGA LSB 0.008545 0.42682 4.69799
16 1O5I NAD 0.02171 0.41214 4.69799
17 5M67 NAD 0.04182 0.40719 4.69799
18 3BXF FBP 0.01267 0.41668 4.70588
19 4KQI RBZ 0.01128 0.43324 5.36913
20 3KJS DQ1 0.02405 0.41461 5.36913
21 1KOJ PAN 0.01582 0.4021 5.36913
22 1WG8 SAM 0.01068 0.41814 6.71141
23 1APZ ASP 0.01102 0.40181 6.71141
24 4F4P 0SB 0.04766 0.40134 6.71141
25 2HQM FAD 0.04618 0.40001 6.71141
26 3EWC MCF 0.006014 0.42131 7.38255
27 1EU1 MGD 0.04772 0.40293 7.38255
28 2Q7V FAD 0.03124 0.40016 7.38255
29 1NLM UD1 0.02449 0.40112 8.05369
30 3KV8 FAH 0.007114 0.45225 8.63309
31 3DDC GNP 0.0108 0.43564 8.72483
32 2BLF MSS 0.01916 0.41401 8.72483
33 2EW1 GNP 0.01937 0.40161 8.72483
34 1LLO NAA NAA AMI 0.03646 0.40123 9.39597
35 4L2H AR6 AR6 0.009284 0.42702 10.0671
36 2PT9 2MH 0.02176 0.40647 10.0671
37 2PT9 S4M 0.01531 0.40582 10.0671
38 2VAR AMP 0.01274 0.4052 10.0671
39 2YAJ 4HP 0.0105 0.40092 10.0671
40 1NVV GNP 0.008186 0.44082 10.7383
41 1ZGA SAH 0.008031 0.42645 10.7383
42 1HXD BTN 0.008448 0.42236 10.7383
43 4UCI SAM 0.01658 0.41708 10.7383
44 4DHY GLC 0.0118 0.4373 12.0805
45 2GV8 FAD 0.02571 0.42413 12.0805
46 2GVC FAD 0.03324 0.41622 12.0805
47 1VQW FAD 0.04014 0.41007 12.0805
48 4R84 CSF 0.0113 0.40325 14.094
49 4HDO GNP 0.007596 0.44692 20.1342
50 2AE2 NAP 0.04344 0.40791 20.1342
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