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Receptor
PDB id Resolution Class Description Source Keywords
1USF 1.3 Å EC: 1.-.-.- PUTATIVE STYRENE MONOOXYGENASE SMALL COMPONENT WITH BOUND NADP+ THERMUS THERMOPHILUS OXYGENASE FMN-BINDING PROTEIN STRUCTURAL GENOMICS MONOOXYGENASE NADP RIKEN STRUCTURAL GENOMICS/PROTEOMICS INITIATIVE RSGI
Ref.: CRYSTAL STRUCTURE OF PUTATIVE STYRENE MONOOXYGENASE SMALL COMPONENT FROM THERMUS THERMOPHILUS TO BE PUBLISHED
Ligand
Ligand Chain:Residue Validity Ligand Warnings Binding Data NGL Viewer Molecular Weight (Da) Formula SMILES
FMN A:1179;
B:1179;
Valid;
Valid;
none;
none;
submit data
456.344 C17 H21 N4 O9 P Cc1cc...
GOL A:1182;
B:1182;
Invalid;
Invalid;
none;
none;
submit data
92.094 C3 H8 O3 C(C(C...
NAP A:1180;
A:1181;
B:1180;
B:1181;
Valid;
Valid;
Valid;
Valid;
none;
none;
none;
none;
submit data
743.405 C21 H28 N7 O17 P3 c1cc(...
View in 3D viewer
90% Homology Family
Leader
PDB id Resolution Class Description Source Keywords
1USF 1.3 Å EC: 1.-.-.- PUTATIVE STYRENE MONOOXYGENASE SMALL COMPONENT WITH BOUND NADP+ THERMUS THERMOPHILUS OXYGENASE FMN-BINDING PROTEIN STRUCTURAL GENOMICS MONOOXYGENASE NADP RIKEN STRUCTURAL GENOMICS/PROTEOMICS INITIATIVE RSGI
Ref.: CRYSTAL STRUCTURE OF PUTATIVE STYRENE MONOOXYGENASE SMALL COMPONENT FROM THERMUS THERMOPHILUS TO BE PUBLISHED
Members (5)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 318 families.
1 3ZOF - FMN C17 H21 N4 O9 P Cc1cc2c(cc....
2 1USF - NAP C21 H28 N7 O17 P3 c1cc(c[n+]....
3 1USC - FMN C17 H21 N4 O9 P Cc1cc2c(cc....
4 3ZOH - FMN C17 H21 N4 O9 P Cc1cc2c(cc....
5 3ZOE - HBA C7 H6 O2 c1cc(ccc1C....
70% Homology Family (5)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 280 families.
1 3ZOF - FMN C17 H21 N4 O9 P Cc1cc2c(cc....
2 1USF - NAP C21 H28 N7 O17 P3 c1cc(c[n+]....
3 1USC - FMN C17 H21 N4 O9 P Cc1cc2c(cc....
4 3ZOH - FMN C17 H21 N4 O9 P Cc1cc2c(cc....
5 3ZOE - HBA C7 H6 O2 c1cc(ccc1C....
50% Homology Family (5)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 187 families.
1 3ZOF - FMN C17 H21 N4 O9 P Cc1cc2c(cc....
2 1USF - NAP C21 H28 N7 O17 P3 c1cc(c[n+]....
3 1USC - FMN C17 H21 N4 O9 P Cc1cc2c(cc....
4 3ZOH - FMN C17 H21 N4 O9 P Cc1cc2c(cc....
5 3ZOE - HBA C7 H6 O2 c1cc(ccc1C....
Polypharmacology
Similar Ligands
Ligand no: 1; Ligand: FMN; Similar ligands found: 15
No: Ligand ECFP6 Tc MDL keys Tc
1 FMN 1 1
2 RBF 0.75641 0.876712
3 RS3 0.571429 0.831169
4 FAD 0.543307 0.876543
5 FAS 0.543307 0.876543
6 FAE 0.539062 0.865854
7 LFN 0.475 0.643836
8 C3F 0.473684 0.74359
9 CF4 0.463918 0.734177
10 FAY 0.446043 0.864198
11 FNR 0.444444 0.909091
12 RFL 0.442857 0.845238
13 4LS 0.411215 0.875
14 1VY 0.406593 0.769231
15 DLZ 0.404494 0.782051
Ligand no: 2; Ligand: NAP; Similar ligands found: 123
No: Ligand ECFP6 Tc MDL keys Tc
1 NAP 1 1
2 NA0 0.881356 0.986301
3 TAP 0.872881 0.934211
4 NDO 0.840336 0.972603
5 NAD 0.811966 0.986111
6 N01 0.733871 0.958904
7 A3D 0.712 0.972603
8 NBP 0.707692 0.935065
9 NHD 0.68254 0.958904
10 NJP 0.661417 0.972973
11 NFD 0.658915 0.934211
12 NXX 0.619048 0.959459
13 DND 0.619048 0.959459
14 AMP NAD 0.606061 0.958904
15 ZID 0.605839 0.972603
16 NAQ 0.59854 0.922078
17 ATR 0.59292 0.917808
18 NAE 0.591241 0.946667
19 NDE 0.58042 0.986301
20 A22 0.571429 0.958904
21 NAJ 0.567164 0.986111
22 A2R 0.563025 0.932432
23 NDC 0.561644 0.922078
24 NA7 0.552846 0.907895
25 ODP 0.551471 0.935065
26 A2P 0.539823 0.930556
27 8ID 0.537313 0.910256
28 NPW 0.525547 0.8875
29 NZQ 0.521739 0.910256
30 CNA 0.521739 0.959459
31 NDP 0.514493 0.922078
32 PO4 PO4 A A A A PO4 0.503937 0.930556
33 1DG 0.503401 0.922078
34 DG1 0.503401 0.922078
35 TXP 0.5 0.922078
36 NMN AMP PO4 0.492958 0.921053
37 XNP 0.492958 0.875
38 25L 0.492308 0.958904
39 25A 0.492063 0.972222
40 NMN 0.486726 0.888889
41 NGD 0.485714 0.935065
42 9JJ 0.481707 0.8875
43 2AM 0.477876 0.891892
44 ADP 0.458333 0.945205
45 PAP 0.451613 0.931507
46 A2D 0.445378 0.945205
47 AN2 0.442623 0.932432
48 7L1 0.441558 0.777778
49 ADP PO3 0.44 0.944444
50 SAP 0.44 0.896104
51 AGS 0.44 0.896104
52 M33 0.439024 0.906667
53 AR6 AR6 0.438849 0.945205
54 BA3 0.438017 0.945205
55 OAD 0.43609 0.92
56 ADP BMA 0.43609 0.92
57 DQV 0.435714 0.958904
58 HEJ 0.435484 0.945205
59 ATP 0.435484 0.945205
60 OOB 0.435115 0.958904
61 B4P 0.434426 0.945205
62 AP5 0.434426 0.945205
63 GAP 0.433071 0.92
64 0WD 0.432432 0.922078
65 2A5 0.432 0.87013
66 5FA 0.432 0.945205
67 AQP 0.432 0.945205
68 AT4 0.430894 0.907895
69 00A 0.428571 0.909091
70 DAL AMP 0.427481 0.932432
71 CA0 0.427419 0.92
72 ADP ALF 0.426357 0.871795
73 ALF ADP 0.426357 0.871795
74 9X8 0.425373 0.871795
75 ACP 0.424 0.92
76 NAJ PZO 0.423841 0.897436
77 9SN 0.423358 0.897436
78 ADP VO4 0.423077 0.932432
79 VO4 ADP 0.423077 0.932432
80 WAQ 0.422222 0.884615
81 V3L 0.421875 0.945205
82 ACQ 0.421875 0.92
83 ADQ 0.421053 0.92
84 AR6 0.420635 0.918919
85 APR 0.420635 0.918919
86 ATP A A A 0.42029 0.958333
87 CO7 0.419753 0.786517
88 3OD 0.419118 0.92
89 1ZZ 0.419118 0.841463
90 DLL 0.41791 0.958904
91 AD9 0.417323 0.92
92 NAX 0.416667 0.875
93 OVE 0.416667 0.857143
94 MYR AMP 0.416058 0.841463
95 AV2 0.415385 0.868421
96 A3P 0.414634 0.944444
97 NNR 0.414414 0.72973
98 OMR 0.413793 0.831325
99 6YZ 0.412214 0.92
100 ANP 0.410853 0.92
101 A1R 0.410448 0.860759
102 ABM 0.409836 0.893333
103 A 0.408333 0.944444
104 AMP 0.408333 0.944444
105 SON 0.408 0.933333
106 PPS 0.407692 0.829268
107 5AL 0.407692 0.932432
108 NAI 0.406897 0.909091
109 7D3 0.406504 0.857143
110 ADX 0.404762 0.829268
111 ATF 0.40458 0.907895
112 3UK 0.404412 0.945946
113 TYR AMP 0.404255 0.921053
114 AMP DBH 0.404255 0.894737
115 139 0.402685 0.875
116 50T 0.401575 0.906667
117 SRP 0.401515 0.907895
118 A A 0.40146 0.972222
119 B5V 0.40146 0.933333
120 A3R 0.4 0.860759
121 3AM 0.4 0.90411
122 B5M 0.4 0.921053
123 FA5 0.4 0.933333
Similar Binding Sites (Proteins are less than 50% similar to leader)
Pocket No.: 1; Query (leader) PDB : 1USF; Ligand: FMN; Similar sites found with APoc: 149
This union binding pocket(no: 1) in the query (biounit: 1usf.bio1) has 29 residues
No: Leader PDB Ligand Sequence Similarity
1 1H8P PC None
2 3QX9 ATP None
3 4EOY ASN ASP TRP LEU LEU PRO SER TYR None
4 1LOJ U None
5 1L6O SER LEU LYS LEU MET THR THR VAL None
6 3R5Y F42 None
7 1QSC ACE TYR PRO ILE GLN GLU THR None
8 5IUC SIA GAL A2G None
9 1HSL HIS 1.1236
10 6CB2 OLC 1.68539
11 1TE2 PGA 1.68539
12 1UY4 XYP XYP XYP XYP 2.06897
13 4KZV TRE 2.23881
14 2PIA FMN 2.24719
15 2JFQ DGL 2.24719
16 1KRH FAD 2.24719
17 5C9P FUC 2.24719
18 4RDN 6MD 2.39521
19 1WK9 TSB 2.73973
20 1RY2 AMP 2.80899
21 5OE4 3UK 2.80899
22 1TV5 N8E 2.80899
23 1GAW FAD 2.80899
24 2GMP NAG MAN 2.80899
25 2PHX MAN MAN 2.80899
26 3EGI ADP 2.80899
27 4P86 5GP 2.80899
28 1UKG MMA 2.80899
29 5LKC FUC GLA A2G 2.80899
30 4UCI ADN 3.37079
31 3MHP FAD 3.37079
32 2RC5 FAD 3.37079
33 4DQL FAD 3.37079
34 1LOB MMA 3.84615
35 4G6I RS3 3.93258
36 3A3B RBF 3.93258
37 3A3B FMN 3.93258
38 3MG9 GHP 3MY 3FG GHP GHP OMY 3FG 3.93258
39 3RS8 ALA TRP LEU PHE GLU ALA 3.93258
40 4N14 WR7 3.93258
41 5G6U YJM 3.93258
42 1U25 IHS 3.93258
43 2B1Q TRE 3.93258
44 2P41 G1G 3.93258
45 3P7G MAN 4.10959
46 3R5Z F42 4.13793
47 1ZGS XMM 4.49438
48 1J78 OLA 4.49438
49 6AM8 TRP 4.49438
50 1TLL FAD 4.49438
51 1AMU AMP 4.49438
52 1XF1 CIT 4.49438
53 5LX9 OLB 4.49438
54 5A9A UTP 4.49438
55 5VKM GAL SIA 4.49438
56 1T10 F6P 4.49438
57 1L7N ALF 4.49438
58 4C91 REL 4.49438
59 5A04 BGC 5.05618
60 2GZM DGL 5.05618
61 1B4P GPS 5.05618
62 3E7W AMP 5.05618
63 4EJ1 FOL 5.05618
64 3JQQ FAD 5.05618
65 2QTZ FAD 5.05618
66 4ZAD 4LU 5.05618
67 3B0X DGT 5.05618
68 6BMN PAP 5.05618
69 3CV2 COA 5.05618
70 1RL4 BRR 5.31915
71 4GR5 APC 5.61798
72 5E5U MLI 5.61798
73 3NKS ACJ 5.61798
74 1SM4 FAD 5.61798
75 1MDB AMP DBH 5.61798
76 4LHD GLY 5.61798
77 2RC8 DSN 5.61798
78 2AF6 FAD 5.61798
79 5E6O TRP GLU GLU LEU 5.9322
80 4G0P U5P 6.12245
81 4F9U PBD 6.17978
82 2EFX NFA 6.17978
83 1EP2 FAD 6.17978
84 1O6B ADP 6.50888
85 4IA6 EIC 6.74157
86 1KZL CRM 6.74157
87 2NU8 COA 6.74157
88 6DA9 FMN 6.74157
89 3VO1 FAD 6.74157
90 2JLD ALA GLY GLY ALA ALA ALA ALA ALA 6.74157
91 1DKU AP2 6.74157
92 6H8S FSZ 6.74157
93 1WK8 VMS 6.74157
94 5H5J FAD 7.2165
95 3TW1 AHN 7.30337
96 5CX6 CDP 7.30337
97 2VVT DGL 7.30337
98 5G48 1FL 7.30337
99 4ZAC 4LU 7.86517
100 5NC1 NAG 7.86517
101 1WLJ U5P 7.86517
102 2P4T NAP 8.06452
103 1UGX GAL MGC 8.27068
104 3QPB URA 8.42697
105 1JG3 VAL TYR PRO IAS HIS ALA 8.42697
106 4USS GSH 8.42697
107 5N6N SUC 8.42697
108 4LI4 AMP 8.82353
109 2G50 ALA 8.98876
110 1EWY FAD 9.18367
111 5O3N 4LU 9.55056
112 1PVC ILE SER GLU VAL 9.55056
113 1BC5 ACE ASN TRP GLU THR PHE 9.55056
114 1O8B ABF 9.55056
115 4RHS SIA SIA GAL 10.1124
116 1F20 FAD 10.1124
117 3GD8 GOL 10.1124
118 4UZI IMD 10.1124
119 1MJT ITU 10.6742
120 2D37 FMN 11.236
121 2D37 NAD 11.236
122 5F1V 3VN 11.236
123 3WH2 FLC 11.5646
124 5JCA FAD 12.3596
125 1IXI 2HP 12.3596
126 1ZUW DGL 12.9213
127 4ZA8 4LU 12.9213
128 4ZA8 FZZ 12.9213
129 4ZA8 F5C 12.9213
130 4IRP UDP 13.4831
131 2DWU DGL 13.4831
132 3TDC 0EU 14.0449
133 2CYB TYR 14.0449
134 6F4W FMC 14.6067
135 3CB0 FMN 15.0289
136 1XPJ TLA 15.0794
137 2IBN I1N 15.1685
138 5WXU FLC 15.7303
139 2IVD ACJ 16.2921
140 3UEC ALA ARG TPO LYS 17.1233
141 1FX8 BOG 17.9775
142 5E58 CPZ 19.1011
143 1LK7 DER 21.9101
144 1YOA FAD 26.4151
145 4OAS 2SW 27.0833
146 3ZOD HQE 33.1461
147 3ZOD FMN 33.1461
148 1EJE FMN 34.8315
149 2ED4 FAD 38.255
Pocket No.: 2; Query (leader) PDB : 1USF; Ligand: NAP; Similar sites found with APoc: 149
This union binding pocket(no: 2) in the query (biounit: 1usf.bio1) has 32 residues
No: Leader PDB Ligand Sequence Similarity
1 1H8P PC None
2 3QX9 ATP None
3 4EOY ASN ASP TRP LEU LEU PRO SER TYR None
4 1L6O SER LEU LYS LEU MET THR THR VAL None
5 3R5Y F42 None
6 1QSC ACE TYR PRO ILE GLN GLU THR None
7 1HSL HIS 1.1236
8 1TE2 PGA 1.68539
9 6CB2 OLC 1.68539
10 4F8L AES 2.06897
11 1UY4 XYP XYP XYP XYP 2.06897
12 2PIA FMN 2.24719
13 1KRH FAD 2.24719
14 2JFQ DGL 2.24719
15 3ENV ABF 2.24719
16 5C9P FUC 2.24719
17 1O5O U5P 2.24719
18 4RDN 6MD 2.39521
19 1WK9 TSB 2.73973
20 2GNB MAN 2.80899
21 1RY2 AMP 2.80899
22 1TV5 N8E 2.80899
23 1GAW FAD 2.80899
24 5XLA SIA 2.80899
25 3EGI ADP 2.80899
26 2GMP NAG MAN 2.80899
27 2E9L PLM 2.80899
28 2PHX MAN MAN 2.80899
29 4P86 5GP 2.80899
30 1UKG MMA 2.80899
31 4UCI ADN 3.37079
32 3MHP FAD 3.37079
33 2RC5 FAD 3.37079
34 4DQL FAD 3.37079
35 4G6I RS3 3.93258
36 3A3B RBF 3.93258
37 3A3B FMN 3.93258
38 3MG9 GHP 3MY 3FG GHP GHP OMY 3FG 3.93258
39 3RS8 ALA TRP LEU PHE GLU ALA 3.93258
40 4N14 WR7 3.93258
41 5G6U YJM 3.93258
42 1U25 IHS 3.93258
43 2P41 G1G 3.93258
44 2Q8G AZX 3.93258
45 3P7G MAN 4.10959
46 3R5Z F42 4.13793
47 1ZGS XMM 4.49438
48 1J78 OLA 4.49438
49 1TLL FAD 4.49438
50 6AM8 TRP 4.49438
51 1UPF URF 4.49438
52 1XF1 CIT 4.49438
53 5A9A UTP 4.49438
54 5VKM GAL SIA 4.49438
55 1AMU AMP 4.49438
56 1L7N ALF 4.49438
57 5MSD AMP 4.49438
58 5KR7 6X9 4.49438
59 4C91 REL 4.49438
60 5A04 BGC 5.05618
61 2GZM DGL 5.05618
62 1B4P GPS 5.05618
63 2QTZ FAD 5.05618
64 3JQQ FAD 5.05618
65 4ZAD 4LU 5.05618
66 4EJ1 FOL 5.05618
67 3B0X DGT 5.05618
68 1RL4 BRR 5.31915
69 4GR5 APC 5.61798
70 5E5U MLI 5.61798
71 3NKS ACJ 5.61798
72 4LHD GLY 5.61798
73 1SM4 FAD 5.61798
74 2AF6 FAD 5.61798
75 5E6O TRP GLU GLU LEU 5.9322
76 4G0P U5P 6.12245
77 4F9U PBD 6.17978
78 2EFX NFA 6.17978
79 1EP2 FAD 6.17978
80 1O6B ADP 6.50888
81 4IA6 EIC 6.74157
82 6DA9 FMN 6.74157
83 1KZL CRM 6.74157
84 2NU8 COA 6.74157
85 3VO1 FAD 6.74157
86 2JLD ALA GLY GLY ALA ALA ALA ALA ALA 6.74157
87 6H8S FSZ 6.74157
88 1DKU AP2 6.74157
89 1WK8 VMS 6.74157
90 5H5J FAD 7.2165
91 3TW1 AHN 7.30337
92 1UH4 GLC GLC GLC GLC GLC GLC 7.30337
93 2VVT DGL 7.30337
94 5CX6 CDP 7.30337
95 2D3Y DU 7.30337
96 5T85 44G 7.86517
97 4ZAC 4LU 7.86517
98 1JHG TRP 7.92079
99 2P4T NAP 8.06452
100 1UGX GAL MGC 8.27068
101 3QPB URA 8.42697
102 1JG3 VAL TYR PRO IAS HIS ALA 8.42697
103 5N6N SUC 8.42697
104 2G50 ALA 8.98876
105 4X5S AZM 8.98876
106 1EWY FAD 9.18367
107 5O3N 4LU 9.55056
108 1PVC ILE SER GLU VAL 9.55056
109 1BC5 ACE ASN TRP GLU THR PHE 9.55056
110 4DG8 AMP 9.55056
111 1O8B ABF 9.55056
112 4RHS SIA SIA GAL 10.1124
113 1F20 FAD 10.1124
114 3GD8 GOL 10.1124
115 1MJT ITU 10.6742
116 2D37 FMN 11.236
117 2D37 NAD 11.236
118 5F1V 3VN 11.236
119 3WH2 FLC 11.5646
120 5JCA FAD 12.3596
121 1ZUW DGL 12.9213
122 4ZA8 4LU 12.9213
123 4ZA8 F5C 12.9213
124 4ZA8 FZZ 12.9213
125 4IRP UDP 13.4831
126 2DWU DGL 13.4831
127 3TDC 0EU 14.0449
128 2CYB TYR 14.0449
129 6F4W FMC 14.6067
130 3CB0 FMN 15.0289
131 1XPJ TLA 15.0794
132 2IVD ACJ 16.2921
133 3UEC ALA ARG TPO LYS 17.1233
134 1MVQ MMA 17.4157
135 1FX8 BOG 17.9775
136 4UP4 NDG 17.9775
137 4UP4 NAG 17.9775
138 4UP4 GAL NAG 17.9775
139 5N9X ATP 17.9775
140 5E58 CPZ 19.1011
141 5CGE 51F 19.6629
142 5MB4 NDG 19.6629
143 2OX9 GAL NAG FUC 20
144 1LK7 DER 21.9101
145 1YOA FAD 26.4151
146 3ZOD HQE 33.1461
147 3ZOD FMN 33.1461
148 1EJE FMN 34.8315
149 2ED4 FAD 38.255
Pocket No.: 3; Query (leader) PDB : 1USF; Ligand: NAP; Similar sites found with APoc: 91
This union binding pocket(no: 3) in the query (biounit: 1usf.bio1) has 7 residues
No: Leader PDB Ligand Sequence Similarity
1 2YJ0 420 None
2 2YJ0 FMN None
3 2UX9 FMN None
4 2GQS C2R 1.68539
5 6FA4 D1W 1.7341
6 4DS0 A2G GAL NAG FUC 2.45399
7 6FSG FMN 2.72109
8 4ZH7 FUC GAL NAG GAL FUC 2.80899
9 4NU0 AP5 2.80899
10 4FE2 AIR 2.80899
11 5H04 NAI 2.80899
12 4HE2 AMP 3.37079
13 5AJP UDP 3.37079
14 4YC0 5OF 3.37079
15 5NDF LU2 3.37079
16 2FFU UDP 3.37079
17 3HY8 PLP 3.37079
18 3HY8 FMN 3.37079
19 2E0N SAH 3.37079
20 3COW 52H 3.93258
21 3FB4 AP5 3.93258
22 4X8O AP5 3.93258
23 2BYS LOB 3.93258
24 2XG5 EC5 3.93258
25 2XG5 EC2 3.93258
26 1LLU NAD 3.93258
27 1ORR NAD 3.93258
28 3QXV MTX 3.96825
29 5ZJ5 NAI 4.32099
30 2PT9 S4M 4.49438
31 1TLL NAP 4.49438
32 3C5E ATP 4.49438
33 3A5Y KAA 4.49438
34 2Q8M AMP 4.49438
35 5DF1 58X 4.49438
36 5DF1 NAP 4.49438
37 1UPT GTP 4.49438
38 5G41 AP5 5.05618
39 1S3G AP5 5.05618
40 5W7D MYR 5.05618
41 5W7D PX8 5.05618
42 3G5K BB2 5.05618
43 1TT8 PHB 5.4878
44 4MKF AP5 5.52995
45 4MKG AP5 5.52995
46 5V59 8X1 5.61798
47 5VAD 91Y 5.61798
48 5F3I 5UJ 5.61798
49 5VAD PRO 5.61798
50 5E4R 40E 5.61798
51 5EE5 GTP 5.61798
52 5K7U SAM 5.61798
53 4Y24 TD2 5.84416
54 2APC UDM 6.17978
55 6C6O ENG 6.17978
56 1GZF NAD 6.17978
57 4CS4 AXZ 6.17978
58 2VBQ BSJ 6.66667
59 4BG4 ADP 6.74157
60 5X1M THG 6.74157
61 5X1M DHB 6.74157
62 5W10 CMP 6.74157
63 1ZIN AP5 7.30337
64 5G3Y ADP 7.30337
65 4XSH NAI 7.30337
66 1B7Y FYA 7.30337
67 5AYT L6Y 7.54717
68 3CM2 X23 7.69231
69 5F7N NAG GAL FUC FUC A2G 7.86517
70 1REQ DCA 7.86517
71 5F7Y GLC GAL NAG GAL FUC A2G 7.86517
72 5L2R MLA 7.86517
73 2HO2 PRO PRO PRO PRO PRO PRO PRO PRO PRO LEU 7.89474
74 5TFZ 7BC 8
75 1AKY AP5 8.42697
76 4IGQ THR M3L GLN 8.42697
77 5VYQ 0FX 8.98876
78 5N81 8Q2 8.98876
79 2WN6 NDP 8.98876
80 4FK7 P34 8.98876
81 5C83 4YN 9.09091
82 5O3Q CMP 9.16667
83 5LDQ NAP 10.1695
84 2VSL MAA LYS PRO PHE 10.4167
85 3KC1 2T6 10.6742
86 5Y0T TAT 11.7978
87 5XIJ 873 12.3596
88 5XIJ ANP 12.3596
89 6E48 4OA 12.3894
90 5XIO HFG 14.0449
91 4PJT 2YQ 14.6067
Pocket No.: 4; Query (leader) PDB : 1USF; Ligand: NAP; Similar sites found with APoc: 39
This union binding pocket(no: 4) in the query (biounit: 1usf.bio1) has 7 residues
No: Leader PDB Ligand Sequence Similarity
1 2YJ0 COA None
2 1OJZ NAD None
3 5OCG 9R5 1.68539
4 4H03 NAD 2.80899
5 5UY8 AMZ 2.80899
6 4QVX 3CQ 2.99401
7 2D7I UDP 3.37079
8 2PNC CLU 3.37079
9 5VCM UDP 3.37079
10 1LNX URI 3.7037
11 1H5Q NAP 3.93258
12 3UW5 MAA CHG PRO 0DQ 4.31034
13 3A5Z KAA 4.49438
14 5FA6 FMN 5.05618
15 5FA6 NAP 5.05618
16 5FA6 FAD 5.05618
17 4L4V 1VY 5.61798
18 2BVN ENX 5.61798
19 1U7Z PMT 5.61798
20 4CS4 ANP 6.17978
21 5VGR GDP 6.17978
22 2G37 FAD 6.17978
23 1GZF NIR 6.17978
24 1GZF ADP 6.17978
25 5NCF 8T5 6.19469
26 2WJH FLC 6.62651
27 2NVK FAD 6.74157
28 5Z46 8XL 7.30337
29 2I7C AAT 7.86517
30 4OFJ HIS 7.86517
31 6H0B UDP 7.86517
32 2C4J GSO 8.42697
33 5F6U 5VK 8.42697
34 4K30 NLG 8.75
35 5IXG OTP 8.87574
36 1F8G NAD 8.98876
37 2A9K NAD 8.98876
38 2VZZ SCA 11.236
39 4R98 GNH 13.4831
Pocket No.: 5; Query (leader) PDB : 1USF; Ligand: FMN; Similar sites found with APoc: 31
This union binding pocket(no: 5) in the query (biounit: 1usf.bio1) has 29 residues
No: Leader PDB Ligand Sequence Similarity
1 1ONI BEZ None
2 1U4L H1S None
3 3KP6 SAL None
4 6CS9 PIO None
5 3ENV ABF 2.24719
6 2UYP PPI 2.32558
7 2UYN 2KT 2.32558
8 2JAC GSH 2.72727
9 2GNB MAN 2.80899
10 2GMM MAN MAN 2.80899
11 1RV0 NDG 2.80899
12 4MDB RLT 2.80899
13 5T52 A2G 3.37079
14 1UTJ ABN 3.37079
15 1I1E DM2 3.93258
16 5HCF BGC 4.49438
17 3W68 PBU 5.05618
18 1C3X 8IG 5.61798
19 3SJK LYS PRO VAL LEU ARG THR ALA 6.17978
20 3R4S SIA 6.17978
21 3G6N MET ALA SER 6.74157
22 4TVD BGC 7.30337
23 5T85 44G 7.86517
24 1JHG TRP 7.92079
25 1S14 NOV 8.42697
26 3ZKN WZV 13.3028
27 2P3V SRT 14.0449
28 1NME 159 16.4384
29 1MVQ MMA 17.4157
30 2BVE PH5 17.6471
31 2OX9 GAL NAG FUC 20
Pocket No.: 6; Query (leader) PDB : 1USF; Ligand: NAP; Similar sites found with APoc: 25
This union binding pocket(no: 6) in the query (biounit: 1usf.bio1) has 32 residues
No: Leader PDB Ligand Sequence Similarity
1 1ONI BEZ None
2 1U4L H1S None
3 3KP6 SAL None
4 2JAC GSH 2.72727
5 2GMM MAN MAN 2.80899
6 4MDB RLT 2.80899
7 3B6C SDN 3.37079
8 5T52 A2G 3.37079
9 2B1Q TRE 3.93258
10 3CQO FUC 3.93258
11 5HCF BGC 4.49438
12 2JBM SRT 5.05618
13 3E7W AMP 5.05618
14 4L77 CNL 5.61798
15 1C3X 8IG 5.61798
16 3R4S SIA 6.17978
17 4TVD BGC 7.30337
18 4ZTE 4RL 7.30337
19 5NC1 NAG 7.86517
20 1S14 NOV 8.42697
21 3IK7 BOB 10.3604
22 3ZKN WZV 13.3028
23 2P3V SRT 14.0449
24 1NME 159 16.4384
25 3HQ9 OXL 17.9775
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