Receptor
PDB id Resolution Class Description Source Keywords
1U8Z 1.5 Å NON-ENZYME: SIGNAL_HORMONE CRYSTAL STRUCTURES OF RAL-GPPNHP AND RAL-GDP REVEAL TWO NOVEL BINDING SITES THAT ARE ALSO PRESENT IN RAS AND RAP SAGUINUS OEDIPUS RAL GNP GTP GMPPNP GPPNHP GDP GTPASE RAS SIGNALING PROTEIN
Ref.: CRYSTAL STRUCTURES OF RAL-GPPNHP AND RAL-GDP REVEAL TWO BINDING SITES THAT ARE ALSO PRESENT IN RAS AND RAP STRUCTURE V. 12 2025 2004
Ligand
Ligand Chain:Residue Validity Ligand Warnings Binding Data NGL Viewer Molecular Weight (Da) Formula SMILES
GDP A:201;
B:202;
 Valid;
Valid;
 none;
none;
 submit data
443.201 C10 H15 N5 O11 P2 c1nc2...
MG A:301;
B:302;
 Part of Protein;
Part of Protein;
 none;
none;
 submit data
24.305 Mg [Mg+2...
View in 3D viewer
90% Homology Family
Leader
PDB id Resolution Class Description Source Keywords
1U8Z 1.5 Å NON-ENZYME: SIGNAL_HORMONE CRYSTAL STRUCTURES OF RAL-GPPNHP AND RAL-GDP REVEAL TWO NOVEL BINDING SITES THAT ARE ALSO PRESENT IN RAS AND RAP SAGUINUS OEDIPUS RAL GNP GTP GMPPNP GPPNHP GDP GTPASE RAS SIGNALING PROTEIN
Ref.: CRYSTAL STRUCTURES OF RAL-GPPNHP AND RAL-GDP REVEAL TWO BINDING SITES THAT ARE ALSO PRESENT IN RAS AND RAP STRUCTURE V. 12 2025 2004
Members (3)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 263 families.
1 1U8Z - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
2 1U90 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
3 1U8Y - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
70% Homology Family (147)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 14 families.
1 3RS3 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
2 2CL6 - CAG C18 H23 N6 O16 P3 C[C@H](c1c....
3 5WDO - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
4 3TGP - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
5 1P2T - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
6 4Q01 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
7 4M21 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
8 821P - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
9 1Q21 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
10 6Q21 - GCP C11 H18 N5 O13 P3 c1nc2c(n1[....
11 4L9W - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
12 4WA7 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
13 3V4F - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
14 3K9N - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
15 4M1T - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
16 4XVQ - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
17 5V71 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
18 2QUZ - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
19 1CLU Kd = 5.4 nM DBG C23 H27 N8 O13 P3 c1ccc(cc1)....
20 4L8G - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
21 2RGD - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
22 4PZY - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
23 4LPK - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
24 4DLV - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
25 4LRW - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
26 2CLD - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
27 4M1W - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
28 3L8Z - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
29 3LBH - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
30 721P - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
31 1LF5 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
32 1GNR - CAG C18 H23 N6 O16 P3 C[C@H](c1c....
33 4LUC - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
34 2RGE - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
35 4DLS - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
36 4M22 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
37 4DLY - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
38 1ZW6 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
39 2RGC - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
40 5V9L - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
41 2CL0 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
42 4TQA - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
43 3RRZ - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
44 2EVW - XY2 C12 H15 N5 O4 CC(=O)N(C)....
45 2RGB - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
46 4LDJ - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
47 1XJ0 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
48 1ZVQ - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
49 1P2S - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
50 5V6V - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
51 621P - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
52 1P2V - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
53 2CL7 - GTP C10 H16 N5 O14 P3 c1nc2c(n1[....
54 3OIW - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
55 4LV6 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
56 4DLT - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
57 1P2U - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
58 5V6S - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
59 3RS0 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
60 5B30 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
61 5B2Z - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
62 3KKN - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
63 4M1O - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
64 4M1Y - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
65 3I3S - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
66 4OBE - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
67 3RRY - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
68 1QRA - GTP C10 H16 N5 O14 P3 c1nc2c(n1[....
69 4LYJ - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
70 121P - GCP C11 H18 N5 O13 P3 c1nc2c(n1[....
71 1RVD - DBG C23 H27 N8 O13 P3 c1ccc(cc1)....
72 2RGA - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
73 3RS7 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
74 5UHV - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
75 2CLC - GTP C10 H16 N5 O14 P3 c1nc2c(n1[....
76 4EPT - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
77 4EPY Kd = 340 uM 0QY C21 H21 N5 O c1ccc2c(c1....
78 4DLZ - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
79 1AGP - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
80 1GNQ - CAG C18 H23 N6 O16 P3 C[C@H](c1c....
81 2Q21 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
82 3RS2 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
83 4L9S - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
84 4M1S - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
85 4EPV - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
86 5WDP - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
87 4TQ9 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
88 3K8Y - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
89 3OIV - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
90 4Q02 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
91 3LBI - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
92 3RSL - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
93 1LF0 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
94 1XCM - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
95 421P - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
96 4DLR - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
97 2CE2 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
98 4QL3 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
99 4Q21 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
100 4DLU - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
101 1CTQ - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
102 3OIU - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
103 3RS5 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
104 4EPW - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
105 5WDQ - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
106 1IOZ - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
107 221P - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
108 4LYH - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
109 4DLX - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
110 4Q03 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
111 4PZZ - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
112 3KKM - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
113 1JAI - GCP C11 H18 N5 O13 P3 c1nc2c(n1[....
114 3L8Y - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
115 3RS4 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
116 3LBN - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
117 4NMM - Y9Z C14 H22 N6 O12 P2 CC(=O)NCCO....
118 3RSO - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
119 4XVR - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
120 5P21 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
121 5F2E - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
122 4EPX - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
123 4EPR - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
124 4DLW - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
125 5V9O - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
126 2RGG - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
127 4LYF - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
128 1JAH - GCP C11 H18 N5 O13 P3 c1nc2c(n1[....
129 5US4 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
130 5UQW - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
131 5USJ - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
132 4DSU - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
133 4DST - GCP C11 H18 N5 O13 P3 c1nc2c(n1[....
134 4DSO - GSP C10 H16 N5 O13 P3 S c1nc2c(n1[....
135 4DSN - GCP C11 H18 N5 O13 P3 c1nc2c(n1[....
136 1KAO - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
137 3RAP - GTP C10 H16 N5 O14 P3 c1nc2c(n1[....
138 1X1S - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
139 3X1Z - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
140 3X1Y - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
141 3X1W - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
142 3X1X - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
143 1U8Z - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
144 1U90 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
145 1U8Y - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
146 5WDR - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
147 5WDS - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
50% Homology Family (246)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 141 families.
1 1Z2A - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
2 1Z22 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
3 1YZT - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
4 1YZU - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
5 1Z08 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
6 1Z0I - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
7 4DKX - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
8 2Y8E - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
9 2A5J - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
10 4LHW - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
11 4LHV - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
12 2P2L - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
13 2W2V - GTP C10 H16 N5 O14 P3 c1nc2c(n1[....
14 1MH1 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
15 2WKP - FMN C17 H21 N4 O9 P Cc1cc2c(cc....
16 2WKQ - FMN C17 H21 N4 O9 P Cc1cc2c(cc....
17 3RS3 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
18 2CL6 - CAG C18 H23 N6 O16 P3 C[C@H](c1c....
19 5WDO - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
20 3TGP - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
21 1P2T - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
22 4Q01 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
23 4M21 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
24 821P - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
25 1Q21 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
26 6Q21 - GCP C11 H18 N5 O13 P3 c1nc2c(n1[....
27 4L9W - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
28 4WA7 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
29 3V4F - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
30 3K9N - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
31 4M1T - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
32 4XVQ - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
33 5V71 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
34 2QUZ - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
35 1CLU Kd = 5.4 nM DBG C23 H27 N8 O13 P3 c1ccc(cc1)....
36 4L8G - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
37 2RGD - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
38 4PZY - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
39 4LPK - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
40 4DLV - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
41 4LRW - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
42 2CLD - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
43 4M1W - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
44 3L8Z - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
45 3LBH - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
46 721P - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
47 1LF5 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
48 1GNR - CAG C18 H23 N6 O16 P3 C[C@H](c1c....
49 4LUC - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
50 2RGE - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
51 4DLS - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
52 4M22 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
53 4DLY - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
54 1ZW6 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
55 2RGC - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
56 5V9L - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
57 2CL0 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
58 4TQA - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
59 3RRZ - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
60 2EVW - XY2 C12 H15 N5 O4 CC(=O)N(C)....
61 2RGB - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
62 4LDJ - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
63 1XJ0 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
64 1ZVQ - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
65 1P2S - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
66 5V6V - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
67 621P - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
68 1P2V - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
69 2CL7 - GTP C10 H16 N5 O14 P3 c1nc2c(n1[....
70 3OIW - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
71 4LV6 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
72 4DLT - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
73 1P2U - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
74 5V6S - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
75 3RS0 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
76 5B30 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
77 5B2Z - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
78 3KKN - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
79 4M1O - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
80 4M1Y - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
81 3I3S - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
82 4OBE - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
83 3RRY - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
84 1QRA - GTP C10 H16 N5 O14 P3 c1nc2c(n1[....
85 4LYJ - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
86 121P - GCP C11 H18 N5 O13 P3 c1nc2c(n1[....
87 1RVD - DBG C23 H27 N8 O13 P3 c1ccc(cc1)....
88 2RGA - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
89 3RS7 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
90 5UHV - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
91 2CLC - GTP C10 H16 N5 O14 P3 c1nc2c(n1[....
92 4EPT - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
93 4EPY Kd = 340 uM 0QY C21 H21 N5 O c1ccc2c(c1....
94 4DLZ - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
95 1AGP - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
96 1GNQ - CAG C18 H23 N6 O16 P3 C[C@H](c1c....
97 2Q21 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
98 3RS2 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
99 4L9S - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
100 4M1S - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
101 4EPV - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
102 5WDP - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
103 4TQ9 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
104 3K8Y - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
105 3OIV - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
106 4Q02 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
107 3LBI - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
108 3RSL - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
109 1LF0 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
110 1XCM - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
111 421P - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
112 4DLR - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
113 2CE2 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
114 4QL3 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
115 4Q21 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
116 4DLU - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
117 1CTQ - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
118 3OIU - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
119 3RS5 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
120 4EPW - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
121 5WDQ - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
122 1IOZ - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
123 221P - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
124 4LYH - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
125 4DLX - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
126 4Q03 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
127 4PZZ - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
128 3KKM - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
129 1JAI - GCP C11 H18 N5 O13 P3 c1nc2c(n1[....
130 3L8Y - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
131 3RS4 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
132 3LBN - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
133 4NMM - Y9Z C14 H22 N6 O12 P2 CC(=O)NCCO....
134 3RSO - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
135 4XVR - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
136 5P21 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
137 5F2E - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
138 4EPX - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
139 4EPR - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
140 4DLW - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
141 5V9O - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
142 2RGG - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
143 4LYF - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
144 1JAH - GCP C11 H18 N5 O13 P3 c1nc2c(n1[....
145 1YU9 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
146 2BME - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
147 2BMD - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
148 1YZN - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
149 3RWM - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
150 3RWO - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
151 3REG - GSP C10 H16 N5 O13 P3 S c1nc2c(n1[....
152 2F9L - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
153 2F9M - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
154 1YZK - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
155 1OIV - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
156 2FE4 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
157 2FFQ - GSP C10 H16 N5 O13 P3 S c1nc2c(n1[....
158 2E9S - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
159 5US4 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
160 5UQW - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
161 5USJ - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
162 3NKV - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
163 1HUQ - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
164 1Z07 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
165 1N6R - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
166 1Z0D - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
167 1N6H - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
168 1N6P - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
169 1N6K - GDP AF3 n/a n/a
170 1N6N - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
171 1N6I - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
172 1R2Q - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
173 1N6L - GTP C10 H16 N5 O14 P3 c1nc2c(n1[....
174 1N6O - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
175 1TU4 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
176 1EK0 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
177 1S8F - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
178 1YZL - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
179 1WMS - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
180 1D5C - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
181 1Z0F - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
182 3E5H - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
183 4DSU - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
184 4DST - GCP C11 H18 N5 O13 P3 c1nc2c(n1[....
185 4DSO - GSP C10 H16 N5 O13 P3 S c1nc2c(n1[....
186 4DSN - GCP C11 H18 N5 O13 P3 c1nc2c(n1[....
187 1KAO - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
188 3RAP - GTP C10 H16 N5 O14 P3 c1nc2c(n1[....
189 1YZQ - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
190 2GIL - GTP C10 H16 N5 O14 P3 c1nc2c(n1[....
191 1Z0A - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
192 1KY2 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
193 1KY3 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
194 2HT6 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
195 3KKO - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
196 3KKQ - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
197 3KKP - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
198 1X1R - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
199 1X1S - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
200 1T91 - GTP C10 H16 N5 O14 P3 c1nc2c(n1[....
201 1VG8 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
202 2GCP - GSP C10 H16 N5 O13 P3 S c1nc2c(n1[....
203 2GCN - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
204 2J0V - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
205 3X1Z - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
206 3X1Y - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
207 3X1W - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
208 3X1X - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
209 4Z8Y - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
210 1G17 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
211 1G16 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
212 1M7B - GTP C10 H16 N5 O14 P3 c1nc2c(n1[....
213 2DPX - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
214 3Q7Q - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
215 3Q7P - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
216 3Q72 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
217 1U8Z - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
218 1U90 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
219 1U8Y - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
220 1YVD - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
221 5WDR - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
222 5WDS - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
223 1Z06 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
224 3TH5 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
225 3SBD - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
226 1OIX - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
227 1OIW - GSP C10 H16 N5 O13 P3 S c1nc2c(n1[....
228 2QRZ - GCP C11 H18 N5 O13 P3 c1nc2c(n1[....
229 1A4R Kd = 9.4 pM GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
230 1KMQ - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
231 1DPF - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
232 1FTN - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
233 1A2B - GSP C10 H16 N5 O13 P3 S c1nc2c(n1[....
234 4U5X - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
235 3Q85 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
236 1RYH - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
237 1RYF - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
238 1VG1 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
239 3RAB - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
240 1GWN - GTP C10 H16 N5 O14 P3 c1nc2c(n1[....
241 2EW1 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
242 4O25 - GTP C10 H16 N5 O14 P3 c1nc2c(n1[....
243 4O2R - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
244 4O2L - GTP C10 H16 N5 O14 P3 c1nc2c(n1[....
245 1XTQ - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
246 3SEA - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
Polypharmacology
Similar Ligands
Ligand no: 1; Ligand: GDP; Similar ligands found: 153
No: Ligand ECFP6 Tc MDL keys Tc
1 GDP 1 1
2 GTP 0.909091 1
3 GP3 0.881579 0.973684
4 GNH 0.858974 0.986667
5 GNP 0.839506 0.973684
6 G 0.828947 0.986486
7 5GP 0.828947 0.986486
8 G1R 0.82716 0.986667
9 GCP 0.82716 0.973684
10 GSP 0.817073 0.948718
11 GAV 0.797619 0.961039
12 GMV 0.792683 0.973684
13 G2P 0.77381 0.961039
14 G2R 0.770115 0.961039
15 GDP MG 0.759036 0.923077
16 GP2 0.756098 0.961039
17 GDP BEF 0.75 0.9
18 GDD 0.747253 0.961039
19 GKE 0.747253 0.961039
20 GDC 0.747253 0.961039
21 GPG 0.741573 0.961039
22 G3D 0.732558 0.986486
23 ALF 5GP 0.729412 0.888889
24 Y9Z 0.728261 0.902439
25 GTP MG 0.724138 0.923077
26 BEF GDP 0.724138 0.888889
27 G5P 0.723404 0.973684
28 GFB 0.72043 0.961039
29 GTG 0.72043 0.936709
30 GDR 0.72043 0.961039
31 G4P 0.715909 0.986486
32 GCP G 0.715909 0.935065
33 6CK 0.712766 0.936709
34 G3A 0.712766 0.973684
35 GDP ALF 0.7 0.888889
36 GDP AF3 0.7 0.888889
37 YGP 0.698925 0.901235
38 JB2 0.697917 0.961039
39 GKD 0.697917 0.961039
40 GDX 0.690722 0.973684
41 GPD 0.690722 0.925
42 GMP 0.684211 0.88
43 0O2 0.666667 0.986486
44 G G 0.659574 0.935065
45 JB3 0.656863 0.948718
46 NGD 0.650485 0.961039
47 GDP 7MG 0.636364 0.911392
48 DGI 0.636364 0.923077
49 U2G 0.634615 0.936709
50 GPX 0.634409 0.946667
51 IDP 0.632184 0.972973
52 2MD 0.632075 0.891566
53 CAG 0.62963 0.880952
54 CG2 0.622642 0.936709
55 FEG 0.619048 0.879518
56 MGD 0.614679 0.891566
57 ZGP 0.613208 0.869048
58 GH3 0.612903 0.973333
59 3GP 0.611765 0.946667
60 MD1 0.607143 0.891566
61 PGD 0.59292 0.925
62 DGT 0.591398 0.923077
63 BGO 0.588785 0.924051
64 TPG 0.582609 0.840909
65 DBG 0.582609 0.948718
66 2GP 0.574713 0.96
67 FE9 0.570175 0.776596
68 I2C FE2 CMO CMO 0.566372 0.808989
69 G A A A 0.553571 0.923077
70 MGP 0.553191 0.961039
71 U A G G 0.548673 0.935065
72 G4M 0.548387 0.880952
73 6G0 0.547368 0.961039
74 G1R G1R 0.542373 0.924051
75 P2G 0.527473 0.883117
76 PGD O 0.525 0.850575
77 ADP 0.522222 0.92
78 GGM 0.517544 0.901235
79 DG 0.516484 0.910256
80 DGP 0.516484 0.910256
81 P1G 0.516129 0.871795
82 G G U 0.509259 0.935065
83 G1G 0.508475 0.925
84 IMP 0.505495 0.959459
85 G C 0.504348 0.9
86 GPC 0.491525 0.879518
87 G7M 0.483871 0.948052
88 6AD 0.479592 0.841463
89 ATP 0.473684 0.92
90 G2Q 0.471154 0.961039
91 U G A 0.469697 0.888889
92 5FA 0.46875 0.92
93 AQP 0.46875 0.92
94 GTA 0.468468 0.936709
95 7DD 0.468085 0.906667
96 G G G RPC 0.466102 0.875
97 SGP 0.463158 0.82716
98 01G 0.462963 0.902439
99 B4P 0.457447 0.894737
100 AP5 0.457447 0.894737
101 A2D 0.456522 0.894737
102 G G G C 0.455285 0.9125
103 ACQ 0.454545 0.896104
104 5GP 5GP 0.454545 0.883117
105 ANP 0.454545 0.896104
106 A G C C 0.451613 0.911392
107 APC G U 0.45082 0.886076
108 G U34 0.449153 0.888889
109 DG DG 0.448598 0.865854
110 ITT 0.447917 0.868421
111 BA3 0.446809 0.894737
112 35G 0.444444 0.933333
113 C2E 0.444444 0.921053
114 PCG 0.444444 0.933333
115 MGO 0.441176 0.864198
116 AN2 0.4375 0.907895
117 G C C C 0.4375 0.924051
118 M33 0.43299 0.883117
119 UCG 0.429688 0.911392
120 A G U 0.42963 0.888889
121 ACP 0.428571 0.896104
122 MGQ 0.424528 0.935897
123 7DT 0.424242 0.906667
124 APR 0.424242 0.894737
125 AR6 0.424242 0.894737
126 93A 0.42268 0.833333
127 A4P 0.420168 0.869048
128 SAP 0.42 0.873418
129 AD9 0.42 0.896104
130 AGS 0.42 0.873418
131 G8D 0.42 0.875
132 CA0 0.418367 0.896104
133 ATF 0.417476 0.884615
134 AGO 0.414634 0.888889
135 NIA 0.413043 0.82716
136 MGV 0.412844 0.890244
137 TAT 0.411765 0.884615
138 A1R 0.411215 0.839506
139 ADQ 0.411215 0.871795
140 RGT 0.410714 0.909091
141 CGP 0.409836 0.86747
142 AMP 0.408602 0.893333
143 A 0.408602 0.893333
144 UP5 0.40678 0.873418
145 C2R 0.406593 0.906667
146 AMZ 0.406593 0.918919
147 JBT 0.405882 0.778947
148 A22 0.40566 0.907895
149 25L 0.405405 0.907895
150 ADX 0.40404 0.809524
151 8OD 0.401961 0.946667
152 4TC 0.4 0.851852
153 50T 0.4 0.883117
Similar Binding Sites (Proteins are less than 50% similar to leader)
Pocket No.: 1; Query (leader) PDB : 1U8Z; Ligand: GDP; Similar sites found: 395
This union binding pocket(no: 1) in the query (biounit: 1u8z.bio1) has 24 residues
No: Leader PDB Ligand P-value (APoc) PS_Score (APoc) Sequence Similarity
1 1UPT GTP 0.000000003566 0.64455 None
2 3BFV ADP 0.00001545 0.55479 None
3 5BQ5 ADP BEF 0.00004477 0.51885 None
4 2OFW ADX 0.0005727 0.46212 None
5 2PEZ DAT 0.0005735 0.45412 None
6 4WOP CTP 0.0004821 0.45199 None
7 3UIE ANP 0.0001043 0.4327 None
8 2W58 ADP 0.0000003729 0.42306 None
9 4TTQ ATP 0.0003093 0.40582 None
10 2PL3 ADP 0.0002509 0.40424 None
11 1TQ4 GDP 0.00000001911 0.64032 1.19048
12 1SVI GDP 0.0000000007257 0.5714 1.19048
13 1M7G ADX 0.000859 0.44518 1.19048
14 1M7G ADP 0.001303 0.43451 1.19048
15 1M7G AV2 0.00001832 0.43297 1.19048
16 5KSP GDP 0.00000005059 0.66609 1.78571
17 4QOS ADP 0.0007455 0.46185 1.78571
18 1LVG ADP 0.000002643 0.44427 1.78571
19 1P9B GDP 0.0001551 0.44228 1.78571
20 1VHT BA3 0.0009102 0.40306 1.78571
21 4GOX A3P 0.0007655 0.43563 2.38095
22 1QF9 C5P 0.002819 0.42953 2.38095
23 3P4X ADP 0.00007618 0.41977 2.38095
24 4GBM A3P 0.003389 0.40905 2.38095
25 1GOJ ADP 0.0000004405 0.67423 2.97619
26 4R43 GDP 0.0002333 0.49709 2.97619
27 5H4I 7HQ 0.0005278 0.4944 2.97619
28 5VGR GDP 0.000973 0.44726 2.97619
29 4IOK ADP 0.002039 0.42479 2.97619
30 4IOK XPO 0.001708 0.42307 2.97619
31 2Y65 ADP 0.000006026 0.41443 2.97619
32 4JLV ADP 0.0001519 0.40587 2.97619
33 5LTJ ADP 0.0003843 0.40377 2.97619
34 2KIN ADP 0.00000259 0.41089 3
35 1D2E GDP 0.000000008252 0.58677 3.57143
36 3EZ2 ADP 0.00001381 0.56512 3.57143
37 4LYA ATP 0.00002619 0.53644 3.57143
38 3FKQ ATP 0.00002475 0.51842 3.57143
39 3ZS9 ADP ALF 0.00001631 0.51085 3.57143
40 2WOJ ADP ALF 0.00002091 0.47506 3.57143
41 2IYL GDP 0.000004249 0.47189 3.57143
42 1DAK DPU 0.0005053 0.46804 3.57143
43 2BEK ATP 0.0009035 0.45225 3.57143
44 1Y63 ADP 0.00001447 0.44546 3.57143
45 3VM7 GLC 0.00806 0.44123 3.57143
46 4CVN ADP 0.00001701 0.42927 3.57143
47 2VVG ADP 0.0000004144 0.42892 3.57143
48 3BER AMP 0.007908 0.42212 3.57143
49 3EWA ANP 0.00007571 0.41761 3.57143
50 3FYH ADP 0.002437 0.41669 3.57143
51 1L2T ATP 0.002929 0.41339 3.57143
52 4X1Z FUC GAL NDG 0.02728 0.41226 3.57143
53 2GDJ ANP 0.000146 0.41185 3.57143
54 3QKT ANP 0.003627 0.40954 3.57143
55 5X40 ACP 0.003953 0.4063 3.57143
56 2JLR ANP 0.0007224 0.40629 3.57143
57 4P32 ADP 0.003923 0.40117 3.57143
58 4RD0 GDP 0.000000002681 0.64927 4.16667
59 4M9Q GNP 0.000000003159 0.64696 4.16667
60 4R2I ANP 0.001228 0.47316 4.16667
61 4MKG AP5 0.001006 0.45258 4.16667
62 4MKF AP5 0.001487 0.44624 4.16667
63 1S3G AP5 0.001516 0.44475 4.16667
64 1ZIN AP5 0.001635 0.44331 4.16667
65 2QZ4 ADP 0.00004851 0.44174 4.16667
66 2J5V PCA 0.01189 0.43697 4.16667
67 1P72 ADP 0.001627 0.43475 4.16667
68 1IN4 ADP 0.0003118 0.43322 4.16667
69 2PZE ATP 0.000006033 0.40936 4.16667
70 4B47 GDP 0.0000000001212 0.59449 4.7619
71 3A1S GDP 0.00000001302 0.5644 4.7619
72 1KK1 GNP 0.000000001883 0.55994 4.7619
73 2ZFI ADP 0.00002547 0.54417 4.7619
74 3FWY ADP 0.000003092 0.50264 4.7619
75 5FTB ANP 0.0003866 0.47516 4.7619
76 4XGU ADP 0.0005855 0.4571 4.7619
77 5I34 GDP 0.00002494 0.44982 4.7619
78 5FHD ADP ALF 0.0006993 0.44508 4.7619
79 2B8W ALF 5GP 0.0005457 0.44357 4.7619
80 2QEN ADP 0.0001412 0.44218 4.7619
81 1V8K ANP 0.0000231 0.44019 4.7619
82 5G41 AP5 0.003254 0.43525 4.7619
83 3COB ADP 0.000001434 0.43071 4.7619
84 5IFS ADP 0.0001588 0.42486 4.7619
85 2XT3 ADP 0.000002846 0.42374 4.7619
86 1XKV ATP 0.0002674 0.42112 4.7619
87 1OXV ANP 0.00008591 0.40686 4.7619
88 1JI0 ATP 0.00006176 0.54008 5.35714
89 5GVR LMR 0.0004689 0.48654 5.35714
90 1Z6T ADP 0.0002419 0.47424 5.35714
91 3Q9L ATP 0.0000203 0.47418 5.35714
92 3FB4 AP5 0.001201 0.4492 5.35714
93 3DC4 ADP 0.00001234 0.42963 5.35714
94 4YS0 ADP 0.003607 0.42184 5.35714
95 3TMK T5A 0.003709 0.41533 5.35714
96 1BG2 ADP 0.000001521 0.41512 5.35714
97 1NY5 ADP 0.0007586 0.4139 5.35714
98 1SVM ATP 0.01103 0.41325 5.35714
99 3B5J 12D 0.00004471 0.41053 5.35714
100 3KTA AP5 0.0007513 0.40615 5.35714
101 1G6H ADP 0.000004467 0.40079 5.35714
102 5J1J ANP 0.00002185 0.49912 5.61404
103 3VMF GTP 0.00000001604 0.63374 5.95238
104 5KSZ GCP 0.00000021 0.62752 5.95238
105 4AG5 ADP 0.00001423 0.5791 5.95238
106 3PQC GDP 0.00000006386 0.54687 5.95238
107 4BQS ADP 0.00004636 0.53144 5.95238
108 4PX9 ADP 0.00006957 0.52987 5.95238
109 4IEE AGS 0.0004444 0.48944 5.95238
110 2OZE AGS 0.00007627 0.45818 5.95238
111 2BIF SIN 0.001376 0.44988 5.95238
112 2BIF ANP 0.0007774 0.44988 5.95238
113 5HR5 ADP 0.0002627 0.42949 5.95238
114 4FRZ ADP 0.000006475 0.42505 5.95238
115 3H4S ADP 0.000002291 0.42497 5.95238
116 2CE7 ADP 0.0001397 0.42485 5.95238
117 5WRI A3P 0.002187 0.4203 5.95238
118 1KO8 6PG 0.0008029 0.41882 5.95238
119 5WRJ A3P 0.002449 0.41661 5.95238
120 1UJ2 ADP 0.003074 0.41576 5.95238
121 4KFU ACP 0.00002887 0.41073 5.95238
122 2F5X ASP 0.02197 0.40984 5.95238
123 1UJ2 C5P 0.004572 0.40855 5.95238
124 1T5C ADP 0.000004574 0.40393 5.95238
125 2WHX ADP 0.00003618 0.40212 5.95238
126 5MEX SZZ 0.01315 0.40143 5.95238
127 4ADC PLP 0.01791 0.40083 5.95238
128 2I4I AMP 0.01071 0.40068 5.95238
129 2ZTS ADP 0.001506 0.43471 5.9761
130 3QF7 ANP 0.001123 0.41195 6
131 2QN6 GDP 0.0000000004944 0.57645 6.45161
132 3WYA GDP 0.00000000005819 0.61853 6.54762
133 2NCD ADP 0.000008124 0.59222 6.54762
134 3WY9 GDP 0.0000000001778 0.58754 6.54762
135 3CNL GNP 0.000000002342 0.55194 6.54762
136 5LB3 ADP 0.000438 0.48976 6.54762
137 4V03 ADP 0.000005982 0.47687 6.54762
138 5N69 ADP 0.0003247 0.47348 6.54762
139 3VX3 ADP 0.00005474 0.46574 6.54762
140 4RZ3 ADP 0.00005161 0.46136 6.54762
141 3KJI ADP 0.00003399 0.46117 6.54762
142 1G41 ADP 0.00007347 0.43569 6.54762
143 5IRN ADP 0.0001256 0.43556 6.54762
144 4HSE ADP 0.00004531 0.43469 6.54762
145 1G8S MET 0.00836 0.43176 6.54762
146 1R6B ADP 0.00008757 0.42561 6.54762
147 4NE2 ADP 0.003339 0.42393 6.54762
148 4NE2 SH2 0.003791 0.42393 6.54762
149 4QM7 GTP 0.0002299 0.40518 6.54762
150 5X8G S0N 0.01851 0.40391 6.54762
151 2QQ0 ANP 0.008882 0.40317 6.54762
152 2QQ0 THM 0.008473 0.40149 6.54762
153 2QQ0 TMP 0.009726 0.40147 6.54762
154 1NRJ GTP 0.00000006108 0.58765 6.96203
155 2WJG GDP 0.000000004736 0.72675 7.14286
156 2C78 GNP 0.000000003622 0.64391 7.14286
157 2C77 GNP 0.000000004576 0.62965 7.14286
158 4NON GDP 0.00000004257 0.56375 7.14286
159 4P4T GDP 0.000001694 0.56354 7.14286
160 5IRR GSP 0.000001131 0.5581 7.14286
161 4WZA ADP 0.00004255 0.53295 7.14286
162 4WZA ACP 0.00004383 0.53235 7.14286
163 1QF5 GDP 0.00005111 0.52027 7.14286
164 1IHU AF3 0.00001759 0.49608 7.14286
165 1IHU ADP 0.0000259 0.49608 7.14286
166 1FP6 ADP 0.000004425 0.488 7.14286
167 5K5Z ANP 0.00006679 0.47156 7.14286
168 1ZUI SKM 0.0004789 0.46167 7.14286
169 1QF5 RPL 0.004831 0.45958 7.14286
170 5H56 TYD 0.001031 0.44033 7.14286
171 5H56 ADP 0.001031 0.44033 7.14286
172 4OHY ANP 0.0005197 0.43566 7.14286
173 1CR1 TTP 0.0008885 0.42208 7.14286
174 3QXC ATP 0.002749 0.41779 7.14286
175 2IS6 ADP 0.0001178 0.41194 7.14286
176 3NHB ADP 0.00002331 0.40701 7.14286
177 2WJH GDP 0.00000006875 0.54192 7.22892
178 2WJH FLC 0.000004351 0.48685 7.22892
179 1GXU 2HP 0.0005682 0.47213 7.69231
180 1TAD GDP 0.00000001229 0.64655 7.7381
181 1SVK ALF GDP 0.00000001505 0.6453 7.7381
182 1YRB GDP 0.000000000219 0.64177 7.7381
183 2OM2 GDP 0.00000005193 0.62175 7.7381
184 1FQJ GDP 0.00000003553 0.61374 7.7381
185 1FQK GDP 0.00000008139 0.59894 7.7381
186 1TAD ALF 0.00000001229 0.57633 7.7381
187 1WDT GTP 0.0000009309 0.5749 7.7381
188 1IWE IMP 0.000254 0.51876 7.7381
189 1FQJ ALF 0.0003143 0.50886 7.7381
190 4D81 ADP 0.0001265 0.49216 7.7381
191 4ZNL BEF ADP 0.0002702 0.48802 7.7381
192 4ZG4 VO4 ADP 0.0001968 0.45988 7.7381
193 4PFO ADP 0.000438 0.44936 7.7381
194 5TSH ANP 0.00005617 0.42625 7.7381
195 4FCW ADP 0.0002532 0.4145 7.7381
196 3DZD ADP 0.0006406 0.41211 7.7381
197 4KVA GTP 0.00001907 0.40906 7.7381
198 3DKP ADP 0.0002993 0.40581 7.7381
199 1JWY GDP 0.0000002517 0.5385 8.33333
200 4XTR ADP 0.00002483 0.5126 8.33333
201 4XTR ATP 0.00006187 0.48054 8.33333
202 4XVU ATP 0.00006941 0.47849 8.33333
203 2RGX AP5 0.002601 0.43658 8.33333
204 4PJ3 ANP 0.00261 0.43216 8.33333
205 1F9V ADP 0.000009553 0.42272 8.33333
206 1JWY ADP 0.000171 0.41592 8.33333
207 4OI4 ATP 0.005253 0.40121 8.69565
208 1AZT GSP 0.00000000874 0.65279 8.92857
209 3T12 GDP ALF 0.00000001897 0.63253 8.92857
210 2XTZ GSP 0.00000001892 0.63076 8.92857
211 3T1O GDP 0.000000006286 0.58267 8.92857
212 1CS4 GSP 0.00000005254 0.56442 8.92857
213 3ZQ6 ADP ALF 0.000006019 0.52893 8.92857
214 3T34 GDP 0.00002282 0.49834 8.92857
215 1G6O ADP 0.0002433 0.48455 8.92857
216 5I0H ADP BEF 0.00004224 0.47379 8.92857
217 5XDR ADP 0.001069 0.45949 8.92857
218 1E2K TMC 0.00149 0.44509 8.92857
219 1UKZ ADP 0.002389 0.42893 8.92857
220 1X9I G6Q 0.005097 0.42704 8.92857
221 3RLF ANP 0.001737 0.42099 8.92857
222 3FVQ ATP 0.001272 0.41534 8.92857
223 4BFW ZVW 0.008015 0.41295 8.92857
224 2AWN ADP 0.0000008879 0.40467 8.92857
225 5FKS BGC BGC XYS BGC GAL XYS BGC XYS GAL 0.019 0.40336 8.92857
226 1XMV ADP 0.000387 0.40232 8.92857
227 1F2U ATP 0.0056 0.40486 9.39597
228 2RCN GDP 0.0000000000333 0.62263 9.52381
229 3MD0 GDP 0.000000001581 0.55983 9.52381
230 1OFH ADP 0.00008425 0.43432 9.52381
231 1KK8 BEF ADP 0.0007091 0.41378 9.52381
232 1B7T ADP 0.0003766 0.41154 9.52381
233 4QRH 0O2 0.003005 0.40043 9.52381
234 1GP2 GDP 0.00000011 0.59357 9.85915
235 3TK1 GDP 0.0000000006429 0.5588 10.119
236 4YMU ATP 0.00005834 0.53371 10.119
237 1YTM ATP 0.000326 0.45927 10.119
238 3R7F CP 0.0237 0.40919 10.119
239 4J0Q GDP 0.0000000004007 0.79285 10.7143
240 4HI0 GDP 0.00000006041 0.61894 10.7143
241 3ZFD ANP 0.00002883 0.45149 10.7143
242 1OS1 ATP 0.001491 0.43205 10.7143
243 1OS1 PYR 0.001616 0.43205 10.7143
244 2FAH GDP 0.0004451 0.4204 10.7143
245 3BFX A3P 0.002029 0.40498 10.7143
246 4BAS GNP 0.00000002048 0.61452 11.3095
247 2Q2Y ADP 0.002023 0.43925 11.3095
248 2Q2Y MKR 0.002016 0.43819 11.3095
249 5M7P ADP 0.000578 0.4242 11.3095
250 1R0X ATP 0.0001674 0.40547 11.3095
251 1YQT ADP 0.00002899 0.40061 11.3095
252 1G7C 5GP 0.0000006854 0.49845 11.7021
253 5JBQ GDP 0.0000000005051 0.77432 11.9048
254 2BVN GNP 0.0000000002153 0.75534 11.9048
255 4PC3 GDP 0.00000003025 0.65736 11.9048
256 1D8T GDP 0.0000000004069 0.58882 11.9048
257 2HCJ GDP 0.0000000001629 0.58657 11.9048
258 3U6B GDP 0.0000000001545 0.58645 11.9048
259 4P3Y GDP 0.000000000182 0.5855 11.9048
260 4G5G GDP 0.0000000005567 0.5853 11.9048
261 3U6K GDP 0.0000000009896 0.57923 11.9048
262 2FNA ADP 0.0001687 0.46697 11.9048
263 3IO3 ADP 0.00003015 0.47309 12.3563
264 2CBZ ATP 0.000002769 0.63531 12.5
265 3WXM GTP 0.0000000205 0.62931 12.5
266 2HF9 GSP 0.00000008388 0.62865 12.5
267 2C9O ADP 0.0001162 0.45717 12.5
268 1X6V ADP 0.0007755 0.44403 12.5
269 4IHQ ADP 0.0002115 0.40376 12.5
270 1W7J ADP BEF 0.0007292 0.45285 12.5828
271 1SKQ GDP 0.000000005067 0.54848 13.0952
272 5GJC ATP 0.0001357 0.50861 13.0952
273 2CK3 ANP 0.000536 0.45431 13.0952
274 2CK3 ADP 0.0007613 0.43573 13.0952
275 1W0J ADP 0.000203 0.43071 13.0952
276 1W0J ADP BEF 0.0005305 0.4245 13.0952
277 3BOS CDP 0.0002668 0.40099 13.0952
278 4PPF FLC 0.000017 0.58105 13.6905
279 4H1V GNP 0.000001763 0.56963 13.6905
280 3EC1 GDP 0.00000001059 0.564 13.6905
281 5H67 ATP 0.004141 0.43135 13.6905
282 5J1S ATP 0.002243 0.41044 13.6905
283 5MVR ADP 0.00008012 0.42115 14.1975
284 1NN5 ANP 0.002025 0.42932 14.2857
285 1SQ5 ADP 0.000119 0.42377 14.2857
286 4LPS GDP 0.000000009284 0.56062 14.881
287 1W5T ANP 0.0003872 0.43662 14.881
288 1W5T ADP 0.0004936 0.42137 14.881
289 2IXE ATP 0.001367 0.41996 14.881
290 1GOT GDP 0.00000005207 0.59879 15.0685
291 1G7S GDP 0.000000001938 0.73377 15.4762
292 4ZKD GDP 0.00000002226 0.63054 15.4762
293 4DCT GDP 0.0000000005221 0.59984 15.4762
294 2DPY ADP 0.0001717 0.5172 15.4762
295 2VF7 ADP 0.000294 0.4059 15.4762
296 5GOE GDP 0.000000004578 0.70506 16.0714
297 3W5J GDP 0.000002359 0.43689 16.0714
298 1JJ7 ADP 0.000003927 0.40195 16.0714
299 4LC1 GDP 0.000000008093 0.71536 16.6667
300 3CX8 GSP 0.00000001035 0.6497 16.6667
301 2GJ8 ALF GDP 0.000000005237 0.6086 16.6667
302 4YDS ATP 0.00003586 0.55225 16.6667
303 2V7Q ATP 0.0001741 0.42432 16.6667
304 2V7Q ADP 0.00006163 0.42251 16.6667
305 4NCN GTP 0.0000000009301 0.67876 17.2619
306 4TMZ GSP 0.000000001152 0.67494 17.2619
307 4WZ6 ATP 0.00001939 0.57342 17.2619
308 1NJF AGS 0.00009906 0.4658 17.2619
309 1NJF ADP 0.000108 0.45087 17.2619
310 2CHG ANP 0.0002617 0.43061 17.2619
311 3ZIA ADP 0.0001913 0.42915 17.4603
312 3ZIA ATP 0.0001003 0.42683 17.4603
313 5KDO GDP 0.00000004941 0.62267 17.5676
314 2ODE ALF GDP 0.00000001327 0.64514 17.8571
315 1ZCB GDP 0.00000006559 0.60832 17.8571
316 3AB3 GDP 0.00000008276 0.58212 17.8571
317 4E03 ADP 0.000009462 0.46459 17.8571
318 5FG3 GDP 0.0000000001116 0.59312 18.4524
319 2VB6 ADP BEF 0.001699 0.42139 18.7919
320 3A4M ADP 0.000006425 0.43562 19.0476
321 4R98 GNH 0.0000003739 0.51122 19.5572
322 5MZN ADP 0.001915 0.46321 19.6429
323 3PCR GTP 0.00000006328 0.60344 19.7531
324 1DAR GDP 0.00000002112 0.54489 20.2381
325 3H86 AP5 0.0008904 0.4487 20.2381
326 3IIJ ADP 0.0000138 0.44447 20.2381
327 2WIC GNP 0.00000004997 0.66635 20.5993
328 1H65 GDP 0.000001595 0.53849 20.8333
329 3LRE ADP 0.0000009005 0.42262 20.8333
330 5HCN GCP 0.000000001299 0.74207 22.0238
331 1MKY GDP 0.00000000001052 0.63875 22.619
332 3DEF GDP 0.000000198 0.54007 23.2143
333 2ZPA ADP 0.0003723 0.43111 25
334 4V0K GDP 0.00000006842 0.60486 26.1905
335 4IDN GNP 0.001453 0.42776 26.1905
336 2XTN GTP 0.000001114 0.55225 27.381
337 1HTW ADP 0.00007026 0.43136 27.8481
338 4KAX GTP 0.000000006292 0.63501 28.5714
339 2W83 GTP 0.00000001139 0.63404 29.0909
340 2A5F GTP 0.000000002701 0.66288 29.1667
341 3DOE GTP 0.000000006787 0.64329 29.7619
342 3AQ4 GDP 0.0000000004547 0.606 29.7619
343 1JJV ATP 0.00003475 0.40976 29.7619
344 3N5C GDP 0.000000001936 0.74577 30.2469
345 1WF3 GNP 0.00000001413 0.63878 30.3571
346 1F6B GDP 0.00000003168 0.54933 30.3571
347 4ZI2 GNP 0.000000003013 0.66603 31.5476
348 4GOJ GNP 0.000000002549 0.6505 31.5476
349 5KUT GDP 0.000000000377 0.60595 31.5476
350 5DI3 GNP 0.000000004667 0.65806 32.1429
351 1J2J GTP 0.000000005605 0.6467 33.1325
352 2J59 GTP 0.000000008827 0.63859 33.1325
353 1O3Y GTP 0.00000001373 0.63071 33.1325
354 2X77 GDP 0.0000000008542 0.59587 33.3333
355 1S9D GDP 0.0000000007009 0.75487 34.1463
356 1RE0 GDP 0.0000000005874 0.57395 34.1463
357 1M2O GNP 0.00000003123 0.62172 34.5238
358 1YZG GDP 0.0000000008068 0.59799 34.5238
359 2QTV GNP 0.00000003073 0.61923 34.7305
360 1KSH GDP 0.000000002485 0.63954 35.119
361 2ZEJ GDP 0.0000002104 0.58978 35.7143
362 1ZJ6 G3D 0.000000000979 0.59603 36.3095
363 5M04 GDP 0.000000001713 0.56474 37.5
364 5EE5 GTP 0.0000000008669 0.66931 38.6905
365 1R4A GNP 0.0000000002357 0.70666 40
366 1K6M AGS 0.001455 0.42417 40.4762
367 4YLG GDP 0.0000000005709 0.72536 41.6667
368 1ZD9 GDP 0.0000000005452 0.71609 43.4524
369 3REF GDP 0.0000000006888 0.67339 44.6429
370 3GJ8 GDP 0.0000000001856 0.78244 48.8095
371 3GJX GTP 0.0000000001269 0.72429 48.8095
372 3GJ5 GDP 0.0000000002081 0.61949 48.8095
373 3GJ7 GDP 0.00000000008443 0.61907 48.8095
374 3GJ4 GDP 0.00000000008512 0.61885 48.8095
375 3GJ0 GDP 0.0000000001148 0.80581 49.4048
376 5UWP GNP 0.00000000004014 0.74836 49.4048
377 4HAT GNP 0.00000000004165 0.74768 49.4048
378 5UWR GNP 0.00000000004175 0.74446 49.4048
379 5UWI GNP 0.00000000004458 0.74327 49.4048
380 5UWT GNP 0.00000000004711 0.74227 49.4048
381 1IBR GNP 0.00000000005746 0.73866 49.4048
382 1WA5 GTP 0.0000000001279 0.73583 49.4048
383 5UWQ GNP 0.00000000003445 0.69062 49.4048
384 5UWO GNP 0.000000000039 0.68871 49.4048
385 5UWW GNP 0.00000000004045 0.68809 49.4048
386 5UWU GNP 0.00000000004047 0.68807 49.4048
387 5DIF GNP 0.00000000004158 0.68762 49.4048
388 5UWJ GNP 0.00000000004579 0.68617 49.4048
389 5DHF GNP 0.00000000005066 0.68467 49.4048
390 5UWH GNP 0.00000000005582 0.68317 49.4048
391 5UWS GNP 0.0000000000549 0.66994 49.4048
392 5DI9 GNP 0.000000000064 0.66758 49.4048
393 1NF3 GNP 0.000000001585 0.64132 49.4048
394 5BXQ GDP 0.0000000001043 0.62742 49.4048
395 3GJ3 GDP 0.0000000001038 0.61614 49.4048
396 4YC7 GNP 0.0000000001232 0.70339 50
397 1GRN GDP 0.0000000002486 0.65263 50
398 2WMO GTP 0.00000000007254 0.64613 50
399 4ITR GDP 0.000000003246 0.62496 50
400 2NGR GDP 0.0000000001138 0.62256 50
401 4DID GDP 0.0000000002049 0.61727 50
Pocket No.: 2; Query (leader) PDB : 1U8Z; Ligand: GDP; Similar sites found: 13
This union binding pocket(no: 2) in the query (biounit: 1u8z.bio2) has 24 residues
No: Leader PDB Ligand P-value (APoc) PS_Score (APoc) Sequence Similarity
1 1W4R TTP 0.008508 0.40301 1.78571
2 4U00 ADP 0.000006853 0.40391 3.57143
3 1B0U ATP 0.001166 0.40583 5.35714
4 1G3M PCQ 0.01639 0.40094 5.35714
5 5MEX PAP 0.002414 0.40758 5.95238
6 5TSH ADP 0.00008451 0.40356 7.7381
7 4LJ9 ACP 0.0003934 0.40798 8.33333
8 2XAU ADP 0.001217 0.40053 8.33333
9 2QG6 NMN 0.009011 0.40055 8.92857
10 1NV8 MEQ 0.009275 0.40139 11.9048
11 1NV8 SAM 0.009778 0.4004 11.9048
12 1RRC ADP 0.00001842 0.40519 17.8571
13 2ZR9 DTP 0.0002941 0.40718 19.0476
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