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Receptor
PDB id Resolution Class Description Source Keywords
1TV8 2.2 Å NON-ENZYME: BINDING STRUCTURE OF MOAA IN COMPLEX WITH S-ADENOSYLMETHIONINE STAPHYLOCOCCUS AUREUS TIM BARREL LIGAND BINDING PROTEIN
Ref.: CRYSTAL STRUCTURE OF THE S-ADENOSYLMETHIONINE-DEPEN ENZYME MOAA AND ITS IMPLICATIONS FOR MOLYBDENUM COF DEFICIENCY IN HUMANS. PROC.NATL.ACAD.SCI.USA V. 101 12870 2004
Ligand
Ligand Chain:Residue Validity Ligand Warnings Binding Data NGL Viewer Molecular Weight (Da) Formula SMILES
DTU A:1502;
Invalid;
none;
submit data
154.251 C4 H10 O2 S2 C([C@...
SAM A:1501;
B:2501;
Valid;
Valid;
none;
none;
submit data
398.437 C15 H22 N6 O5 S C[S@@...
SF4 A:1401;
A:1402;
B:2401;
B:2402;
Part of Protein;
Part of Protein;
Part of Protein;
Part of Protein;
none;
none;
none;
none;
submit data
351.64 Fe4 S4 [S]12...
SO4 A:1403;
B:2403;
Invalid;
Invalid;
none;
none;
submit data
96.063 O4 S [O-]S...
View in 3D viewer
90% Homology Family
Leader
PDB id Resolution Class Description Source Keywords
2FB3 2.35 Å NON-ENZYME: BINDING STRUCTURE OF MOAA IN COMPLEX WITH 5'-GTP STAPHYLOCOCCUS AUREUS S-ADENOSYLMETHIONINE TIM BARREL [4FE-4S] CLUSTERS 5-prime -GTPDEOXYADENOSINE LIGAND BINDING PROTEIN
Ref.: BINDING OF 5'-GTP TO THE C-TERMINAL FES CLUSTER OF RADICAL S-ADENOSYLMETHIONINE ENZYME MOAA PROVIDES I INTO ITS MECHANISM PROC.NATL.ACAD.SCI.USA V. 103 6829 2006
Members (3)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 510 families.
1 2FB2 - SAM C15 H22 N6 O5 S C[S@@+](CC....
2 1TV8 - SAM C15 H22 N6 O5 S C[S@@+](CC....
3 2FB3 Kd = 0.29 uM GTP C10 H16 N5 O14 P3 c1nc2c(n1[....
70% Homology Family (3)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 391 families.
1 2FB2 - SAM C15 H22 N6 O5 S C[S@@+](CC....
2 1TV8 - SAM C15 H22 N6 O5 S C[S@@+](CC....
3 2FB3 Kd = 0.29 uM GTP C10 H16 N5 O14 P3 c1nc2c(n1[....
50% Homology Family (3)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 298 families.
1 2FB2 - SAM C15 H22 N6 O5 S C[S@@+](CC....
2 1TV8 - SAM C15 H22 N6 O5 S C[S@@+](CC....
3 2FB3 Kd = 0.29 uM GTP C10 H16 N5 O14 P3 c1nc2c(n1[....
Polypharmacology
Similar Ligands
Ligand no: 1; Ligand: SAM; Similar ligands found: 202
No: Ligand ECFP6 Tc MDL keys Tc
1 SAM 1 1
2 SMM 0.792683 0.96
3 S4M 0.6875 0.909091
4 S7M 0.670455 0.945946
5 M2T 0.636364 0.878378
6 GEK 0.612903 0.931507
7 SAI 0.571429 0.878378
8 ADN 0.565789 0.773333
9 RAB 0.565789 0.773333
10 XYA 0.565789 0.773333
11 5CD 0.564103 0.783784
12 EP4 0.5625 0.826667
13 SA8 0.56044 0.945205
14 SFG 0.555556 0.875
15 5X8 0.555556 0.888889
16 5N5 0.551282 0.773333
17 A4D 0.544304 0.797297
18 EEM 0.542553 0.945946
19 SAH 0.537634 0.916667
20 DTA 0.536585 0.789474
21 62X 0.535354 0.884615
22 MTA 0.53012 0.875
23 3DH 0.517647 0.849315
24 5AL 0.510417 0.743902
25 54H 0.510204 0.673913
26 VMS 0.510204 0.673913
27 0UM 0.51 0.857143
28 AMP 0.505747 0.707317
29 LMS 0.505747 0.666667
30 A 0.505747 0.707317
31 ABM 0.505618 0.753086
32 A5A 0.505155 0.688889
33 SON 0.5 0.746988
34 SSA 0.5 0.684783
35 6RE 0.5 0.78481
36 K15 0.5 0.883117
37 5AD 0.5 0.75
38 SRP 0.5 0.746988
39 LSS 0.49505 0.706522
40 CA0 0.494624 0.714286
41 A12 0.494505 0.705882
42 AP2 0.494505 0.705882
43 ME8 0.490385 0.841463
44 TSB 0.49 0.681319
45 53H 0.49 0.666667
46 DAL AMP 0.49 0.765432
47 5CA 0.49 0.684783
48 ACP 0.489362 0.694118
49 ADP 0.48913 0.690476
50 5AS 0.48913 0.648936
51 J7C 0.488889 0.772152
52 A2D 0.488889 0.690476
53 ZAS 0.488636 0.769231
54 9ZD 0.485149 0.729412
55 9ZA 0.485149 0.729412
56 8QN 0.485149 0.743902
57 GAP 0.484536 0.73494
58 AN2 0.483871 0.682353
59 A3S 0.483871 0.813333
60 A7D 0.483871 0.851351
61 GJV 0.483516 0.775
62 SRA 0.483146 0.694118
63 LAD 0.480769 0.752941
64 KAA 0.480769 0.698925
65 GSU 0.480769 0.722222
66 AMO 0.480392 0.746988
67 DSZ 0.480392 0.703297
68 52H 0.48 0.666667
69 M33 0.478723 0.722892
70 BA3 0.478261 0.690476
71 MAO 0.478261 0.82716
72 NEC 0.477778 0.75
73 AOC 0.477778 0.776316
74 DSH 0.477778 0.842105
75 SXZ 0.47619 0.894737
76 AHX 0.475728 0.701149
77 NVA LMS 0.475728 0.736264
78 Y3J 0.47561 0.706667
79 G5A 0.474227 0.684783
80 A3T 0.473684 0.8
81 B4P 0.473118 0.690476
82 AP5 0.473118 0.690476
83 A3N 0.472527 0.766234
84 KB1 0.471698 0.833333
85 PRX 0.46875 0.73494
86 APC 0.46875 0.705882
87 AT4 0.468085 0.686047
88 PAJ 0.466019 0.712644
89 4AD 0.466019 0.759036
90 RBY 0.463918 0.72619
91 ADP PO3 0.463918 0.728395
92 ADV 0.463918 0.72619
93 ADX 0.463158 0.666667
94 MHZ 0.463158 0.82716
95 AU1 0.463158 0.674419
96 YAP 0.462963 0.738095
97 TXA 0.462264 0.72619
98 NB8 0.462264 0.72093
99 A3G 0.461538 0.802632
100 VRT 0.459184 0.842105
101 XAH 0.458716 0.715909
102 YSA 0.458716 0.684783
103 HEJ 0.458333 0.690476
104 50T 0.458333 0.682353
105 ATP 0.458333 0.690476
106 LEU LMS 0.457143 0.717391
107 7D7 0.45679 0.723684
108 KH3 0.455357 0.871795
109 ACQ 0.454545 0.694118
110 AR6 0.453608 0.710843
111 APR 0.453608 0.710843
112 AQP 0.453608 0.690476
113 5FA 0.453608 0.690476
114 NSS 0.451923 0.703297
115 FA5 0.449541 0.746988
116 A5D 0.44898 0.789474
117 AD9 0.44898 0.674419
118 AGS 0.44898 0.678161
119 SAP 0.44898 0.678161
120 PTJ 0.448598 0.72093
121 YLB 0.448276 0.758621
122 YLP 0.447368 0.738636
123 8X1 0.446602 0.680851
124 D3Y 0.446602 0.792208
125 ADP ALF 0.445545 0.678161
126 ALF ADP 0.445545 0.678161
127 3AM 0.444444 0.674699
128 MYR AMP 0.444444 0.776471
129 OAD 0.443396 0.73494
130 2VA 0.443299 0.779221
131 S8M 0.442308 0.831169
132 OOB 0.442308 0.722892
133 TYR AMP 0.441441 0.759036
134 6YZ 0.441176 0.694118
135 ADP VO4 0.441176 0.702381
136 VO4 ADP 0.441176 0.702381
137 T99 0.44 0.686047
138 TAT 0.44 0.686047
139 ANP 0.44 0.674419
140 WAQ 0.439252 0.75
141 B5Y 0.436364 0.717647
142 8PZ 0.436364 0.684783
143 F0P 0.435897 0.844156
144 YLC 0.435897 0.755814
145 AAT 0.435644 0.797468
146 1ZZ 0.435185 0.755814
147 9K8 0.435185 0.663158
148 3OD 0.435185 0.73494
149 NVA 2AD 0.434343 0.855263
150 00A 0.433962 0.689655
151 DLL 0.433962 0.722892
152 ARG AMP 0.433628 0.727273
153 7MD 0.433628 0.715909
154 ATF 0.431373 0.666667
155 SO8 0.43 0.792208
156 3UK 0.429907 0.714286
157 A6D 0.429907 0.72619
158 9X8 0.429907 0.717647
159 F2R 0.429752 0.7
160 5SV 0.428571 0.741176
161 AMP DBH 0.428571 0.714286
162 TYM 0.42735 0.746988
163 WSA 0.42735 0.692308
164 9SN 0.427273 0.681818
165 AHZ 0.426087 0.755814
166 P5A 0.425926 0.691489
167 B5V 0.425926 0.705882
168 PR8 0.425926 0.744186
169 A A 0.425926 0.710843
170 3NZ 0.425926 0.807692
171 A1R 0.424528 0.709302
172 2A5 0.424242 0.674419
173 7MC 0.423729 0.719101
174 B5M 0.423423 0.717647
175 7D5 0.422222 0.658824
176 JB6 0.422018 0.709302
177 FYA 0.422018 0.722892
178 AYB 0.421488 0.75
179 A22 0.419048 0.682353
180 MAP 0.419048 0.659091
181 2AM 0.417582 0.666667
182 TAD 0.417391 0.712644
183 A3P 0.416667 0.686747
184 ADP BMA 0.416667 0.714286
185 25A 0.415094 0.690476
186 YLA 0.413223 0.719101
187 8Q2 0.411765 0.663158
188 A3R 0.411215 0.709302
189 ADQ 0.411215 0.694118
190 48N 0.410256 0.72093
191 0XU 0.41 0.824324
192 GA7 0.408696 0.72619
193 7D3 0.40625 0.643678
194 PAP 0.405941 0.678571
195 DQV 0.405172 0.702381
196 OVE 0.404255 0.662791
197 4UV 0.403509 0.697674
198 AF3 ADP 3PG 0.403361 0.712644
199 3AD 0.402299 0.783784
200 CMP 0.402062 0.691358
201 2BA 0.402062 0.682927
202 7C5 0.4 0.731707
Similar Binding Sites (Proteins are less than 50% similar to leader)
Pocket No.: 1; Query (leader) PDB : 2FB3; Ligand: 5AD; Similar sites found with APoc: 167
This union binding pocket(no: 1) in the query (biounit: 2fb3.bio1) has 19 residues
No: Leader PDB Ligand Sequence Similarity
1 5KK4 44E None
2 5CLO NS8 None
3 3VPD ANP 1.42349
4 1U3U BNF 1.47059
5 1U3U NAD 1.47059
6 5C03 AGS 1.47059
7 1Y57 MPZ 1.47059
8 1GSA ADP 1.58228
9 1OLT SAM 1.76471
10 3V4S ATP 1.76471
11 2Q4W FAD 1.76471
12 5OES ADP 1.76471
13 3V4S ADP 1.76471
14 2HSA FMN 1.76471
15 5HVJ ANP 1.90476
16 5EJ2 NAD 1.94805
17 6DEF GCP 2.05882
18 4XH0 ADP 2.05882
19 5IH9 6BF 2.08955
20 3G5D 1N1 2.0979
21 4NZN ANP 2.12121
22 4NZN 2OU 2.12121
23 5ZCT ANP 2.28758
24 6ACS CIT 2.32558
25 2R5T ANP 2.35294
26 5FI3 NAP 2.35294
27 2IO8 ADP 2.35294
28 3ILR SGN IXD 2.35294
29 3VOT ADP 2.35294
30 5AWM ANP 2.35294
31 1KJ8 ATP 2.35294
32 3FSY SCA 2.40964
33 1JPA ANP 2.5641
34 2TPS TPS 2.64317
35 4BV6 FAD 2.64706
36 3A28 NAD 2.71318
37 1U1F 183 2.73438
38 4KS7 X4Z 2.73973
39 2Q7V FAD 2.76923
40 1EHI ADP 2.94118
41 1R37 NAD 2.94118
42 4NFE BEN 2.95359
43 6GNC FAD 3.06122
44 6CI9 NAP 3.0888
45 3VPC ADP 3.19149
46 5J6Y GLC 3.19149
47 5J6Y BGC 3.19149
48 5LY1 PPI 3.23529
49 5IM3 DTP 3.23529
50 4PU5 ANP 3.23529
51 4PZ6 GMP 3.23529
52 4UIB GWX 3.25733
53 4L3L 5FI 3.28947
54 1MFI FHC 3.50877
55 6HTO MET 3.52941
56 6HTO 5AD 3.52941
57 1T36 ADP 3.52941
58 5A5W GUO 3.55731
59 1ZB6 DIN 3.58306
60 4YMJ 4EJ 3.61842
61 3HAV ATP 3.67893
62 1VKF CIT 3.7234
63 2GQS ADP 3.79747
64 2GQR ADP 3.79747
65 5E2N V14 3.80228
66 4FHD EEM 3.82353
67 4FHD 0TT 3.82353
68 1PK8 ATP 3.82353
69 5G48 1FL 3.82353
70 1M0W ANP 4.11765
71 3K5I AIR 4.11765
72 3K5I ADP 4.11765
73 1SDW IYT 4.14013
74 1I7L ATP 4.20712
75 4WW7 AMP 4.27807
76 2YW2 ATP 4.41176
77 4Y0X ADP 4.41176
78 1P0F NAP 4.41176
79 2BPM 529 4.53074
80 1Q6O LG6 4.62963
81 4C91 REL 4.70588
82 3X0V FAD 4.70588
83 3E8N ATP 5
84 3E8N VRA 5
85 1TV5 FMN 5
86 1IA9 ANP 5
87 2BMB PMM 5.29412
88 4ARU TLA 5.29412
89 6AC9 ANP 5.29412
90 4EN4 ATP 5.44872
91 4EN4 GT1 5.44872
92 4EN4 GT0 5.44872
93 1N07 FMN 5.52147
94 2JKG PRO PRO PRO PRO PRO PRO PRO PRO 5.58659
95 2QX0 PH2 5.66038
96 4UTW RFW 5.67686
97 3GGO NAI 5.73248
98 3GGO ENO 5.73248
99 2JHF NAD 5.88235
100 1E4E ADP 5.88235
101 5C1P ADP 5.88235
102 4A4X JUP 6.09319
103 1S5O 152 6.17647
104 2HGS ADP 6.17647
105 1JG9 GLC 6.17647
106 2QCS ANP 6.17647
107 2GU8 796 6.23145
108 3KAL ADP 6.47059
109 4WB7 ATP 6.47059
110 6FL8 TIY 6.47059
111 6FL8 ADP 6.47059
112 4U0O MTA 6.75676
113 5KD6 6C7 6.76471
114 3EXS 5RP 6.78733
115 1Z2P ACP 6.79012
116 1Z2P I3S 6.79012
117 3TKI S25 6.81115
118 3DNT ATP 7.05882
119 1U1J MET 7.05882
120 4OCJ NDG 7.05882
121 4DC2 ADE 7.14286
122 6G9I CXX 7.14286
123 5DZT AMP 7.64706
124 2IF8 ADP 7.64706
125 3EPO MP5 7.64706
126 5HCY 60D 7.85498
127 1JBU BEN 7.93651
128 2JDR L20 7.94118
129 2JDR GLY ARG PRO ARG THR THR SER PHE ALA GLU 7.94118
130 4XZ3 ACP 7.94118
131 3MVH WFE 7.94118
132 5ML3 DL3 8.72483
133 2Q7D ANP 8.82353
134 3LOO B4P 9.41177
135 5K2M ADP 9.43396
136 1UPR 4IP 9.7561
137 3T7V SAM 10
138 1NJJ GET 10
139 3VPB ADP 10.7143
140 3CF6 SP1 11.1765
141 4YSX FAD 11.4706
142 4NBU NAI 11.6
143 4NJH 2K8 11.7391
144 4NJH SAM 11.7391
145 1IOW ADP 12.0915
146 1IOW PHY 12.0915
147 5TH5 MET 12.1673
148 5TH5 7C5 12.1673
149 4DDY DN6 12.1673
150 2VBU CDP 12.5
151 1Y7P RIP 13.0045
152 3TTI KBI 13.2353
153 3RFA SAM 13.5294
154 4WCX SAM 14.1176
155 4JYD SAH 15
156 3LQV ADE 15.3846
157 5WGG SAM 16.7647
158 4M7T SAM 18.8889
159 5EXK 5AD 21.7523
160 5LXT ACP 24.4755
161 3C8F MT2 24.898
162 5VSM MET 32.0755
163 5VSM 5AD 32.0755
164 1O9U ADZ 33.3333
165 4K37 SAM 36.1765
166 4K38 SAM 36.1765
167 4K39 SAM 36.1765
Pocket No.: 2; Query (leader) PDB : 2FB3; Ligand: GTP; Similar sites found with APoc: 209
This union binding pocket(no: 2) in the query (biounit: 2fb3.bio1) has 30 residues
No: Leader PDB Ligand Sequence Similarity
1 5CLO NS8 None
2 2YG2 S1P None
3 3VPD ANP 1.42349
4 4OPC PGT 1.47059
5 4OPC FDA 1.47059
6 6FA4 D1W 1.7341
7 3O2K DST 1.76471
8 1OLT SAM 1.76471
9 5OES ADP 1.76471
10 6BHQ NAG NAG FUL BMA MAN MAN NAG GAL 1.78571
11 3VV1 GAL FUC 1.875
12 5HVJ ANP 1.90476
13 5YSI NCA 1.97368
14 3H22 B53 2.0202
15 6EOM ALA LYS 2.05882
16 4XH0 ADP 2.05882
17 3DAK ANP 2.06897
18 2OVD DAO 2.1978
19 5T9C G3P 2.23881
20 5EO8 TFU 2.2508
21 5ZCT ANP 2.28758
22 2WSI FAD 2.28758
23 3JU6 ANP 2.35294
24 5LHT TIH 2.35294
25 1TKK ALA GLU 2.35294
26 3VOT ADP 2.35294
27 5AWM ANP 2.35294
28 1JPA ANP 2.5641
29 6GW4 CHO 2.60586
30 4YVN EBS 2.64706
31 5Y86 HRM 2.64706
32 3PQB VGP 2.64706
33 4I9A NCN 2.77778
34 4CFT M48 2.94118
35 4CU1 71S 2.94118
36 4FFG 0U8 2.94118
37 4JR7 GNP 2.94118
38 1EHI ADP 2.94118
39 4NFE BEN 2.95359
40 5JSP DQY 2.98507
41 5FYR INS 3.02013
42 4CNO 9PY 3.1746
43 5VGS 9A7 3.18471
44 3VPC ADP 3.19149
45 5J6Y BGC 3.19149
46 5J6Y GLC 3.19149
47 4XJ6 GH3 3.23529
48 5W75 SUC 3.23529
49 5LY2 OGA 3.23529
50 5IM3 DTP 3.23529
51 5LY1 PPI 3.23529
52 4PZ6 GMP 3.23529
53 2OG2 MLI 3.23529
54 1QIN GIP 3.27869
55 5DBX ANP 3.35366
56 5LDQ NAP 3.38983
57 5J75 6GQ 3.40909
58 2VQ5 HBA 3.48259
59 3AJ6 NGA 3.4965
60 1MFI FHC 3.50877
61 4UHL VFV 3.52941
62 2YNE YNE 3.52941
63 2YNE NHW 3.52941
64 4YMJ 4EJ 3.61842
65 3QH2 3NM 3.61991
66 1Y9Q MED 3.64583
67 3HAV ATP 3.67893
68 5OCG 9R5 3.7037
69 1VKF CIT 3.7234
70 2GQS ADP 3.79747
71 2GQR ADP 3.79747
72 3ZGJ RMN 3.82353
73 4FHD EEM 3.82353
74 4FHD 0TT 3.82353
75 3X01 AMP 3.82353
76 3V8S 0HD 3.82353
77 5G48 1FL 3.82353
78 4BG4 ADP 3.82353
79 1VBR XYS XYP 3.96341
80 1M0W ANP 4.11765
81 3K5I ADP 4.11765
82 5YF9 NIO 4.11765
83 1SDW IYT 4.14013
84 1I7L ATP 4.20712
85 4KBA 1QM 4.22961
86 5XQW 8EU 4.2654
87 4Y0X ADP 4.41176
88 2PZI AXX 4.41176
89 4NZF ARB 4.41176
90 4L4J NAG NAG BMA MAN NAG 4.52489
91 4Z3E GAL NGA GLA BGC GAL 4.54545
92 2XG5 EC2 4.62428
93 2XG5 EC5 4.62428
94 1Q6O LG6 4.62963
95 1MJT ITU 4.70588
96 1Q79 3AT 4.70588
97 4M1U A2G MBG 4.7138
98 5FU3 BGC BGC BGC 4.71698
99 2WBV SIA 4.7619
100 4OKE AMP 4.7619
101 5AIG VPR 5
102 3LVW GSH 5
103 4JH6 FCN 5.07246
104 3DGY 2GP 5.15464
105 2BWA GLC BGC 5.28634
106 2R5V HHH 5.29412
107 2BMB PMM 5.29412
108 6AC9 ANP 5.29412
109 4ARU TLA 5.29412
110 4LIT AKG 5.29412
111 5Z46 GST 5.50162
112 5Z46 8XL 5.50162
113 2QX0 PH2 5.66038
114 4IMO PWZ 5.68182
115 3SHR CMP 5.68562
116 1I82 BGC BGC 5.82011
117 5C1P ADP 5.88235
118 2WSA 646 5.88235
119 2WSA MYA 5.88235
120 6F9G PUT 5.919
121 4ZU4 4TG 6.08108
122 5M42 FMN 6.09319
123 1P0Z FLC 6.10687
124 4RDL FUC GAL NDG FUC 6.16883
125 1S5O 152 6.17647
126 4UEC MGT 6.41026
127 5O5Y GLC 6.47059
128 5TPV TYD 6.53595
129 4U0O MTA 6.75676
130 5KD6 LBU 6.76471
131 5KD6 6C7 6.76471
132 6E1Q CFA 6.76471
133 3EXS 5RP 6.78733
134 3M3E GAL A2G NPO 6.8323
135 2HY0 306 6.8323
136 1U1J MET 7.05882
137 4DC2 ADE 7.14286
138 4RF7 ARG 7.35294
139 2BOS GLA GAL 7.35294
140 2BOS GLA GAL GLC 7.35294
141 5FWJ MMK 7.35294
142 5F6U 5VK 7.64331
143 5DZT AMP 7.64706
144 2QK4 ATP 7.64706
145 2IF8 ADP 7.64706
146 5B09 4MX 7.69231
147 4LRJ ANP 7.69231
148 4FE2 ADP 7.84314
149 1JBU BEN 7.93651
150 3M94 M7M 7.93651
151 4XZ3 ACP 7.94118
152 3TII ANP 7.94118
153 5F2T PLM 8.11688
154 1CT9 AMP 8.23529
155 5UPK ANP 8.33333
156 5ML3 DL3 8.72483
157 3KO0 TFP 8.91089
158 2P7Q GG6 9.02256
159 5C8W PCG 9.09091
160 4KYS VIB 9.11765
161 2HZQ STR 9.1954
162 6D61 4AA 9.23077
163 4MNS 2AX 9.43396
164 5K2M ADP 9.43396
165 6GNO XDI 9.62963
166 1UPR 4IP 9.7561
167 3T7V SAM 10
168 1NJJ GET 10
169 5L8L ADP 10.2564
170 3VPB ADP 10.7143
171 2JGB MGT 10.7692
172 4WOE ADP 10.8824
173 4RYV ZEA 10.9677
174 5I8T LAC 11.1732
175 5A67 3PO 11.3208
176 5BVB DOG 11.3636
177 5ZMY TAR 11.465
178 4NJH 2K8 11.7391
179 4NJH SAM 11.7391
180 5TH5 MET 12.1673
181 5TH5 7C5 12.1673
182 4DDY DN6 12.1673
183 1MEX RAC 12.2066
184 5BU3 4W9 12.5
185 1Y7P RIP 13.0045
186 3RFA SAM 13.5294
187 3W25 XYP XYP 13.9881
188 4WCX SAM 14.1176
189 1EOM NAG MAN MAN MAN NAG GAL NAG GAL 14.1379
190 3H9R TAK 14.6789
191 4IAW LIZ 14.8936
192 1SQI 869 15
193 3LQV ADE 15.3846
194 3I4X DST 15.5882
195 5WGG SAM 16.7647
196 4M7T SAM 18.8889
197 1TFZ 869 20.2941
198 5EXK 5AD 21.7523
199 5LXT ACP 24.4755
200 3C8F MT2 24.898
201 1BHX ASP PHE GLU GLU ILE 26.6667
202 5KEW 6SB 31.25
203 5VSM 5AD 32.0755
204 5VSM MET 32.0755
205 1O9U ADZ 33.3333
206 5C79 PBU 35.3333
207 4K37 SAM 36.1765
208 4K38 SAM 36.1765
209 4K39 SAM 36.1765
Pocket No.: 3; Query (leader) PDB : 2FB3; Ligand: MET; Similar sites found with APoc: 153
This union binding pocket(no: 3) in the query (biounit: 2fb3.bio1) has 17 residues
No: Leader PDB Ligand Sequence Similarity
1 5KK4 44E None
2 5CLO NS8 None
3 1GEE NAD 0.766284
4 3VPD ANP 1.42349
5 1U3U NAD 1.47059
6 1U3U BNF 1.47059
7 1Y57 MPZ 1.47059
8 5C03 AGS 1.47059
9 2PYW ADP 1.47059
10 3FPZ AHZ 1.53374
11 1GSA ADP 1.58228
12 5XVG 8FX 1.70648
13 1OLT SAM 1.76471
14 5OES ADP 1.76471
15 2Q3O FMN 1.76471
16 3V4S ATP 1.76471
17 3V4S ADP 1.76471
18 2HSA FMN 1.76471
19 4NW6 2NS 1.85759
20 5HVJ ANP 1.90476
21 5EJ2 NAD 1.94805
22 5YSI NCA 1.97368
23 4UX9 ANP 2.05882
24 6DEF GCP 2.05882
25 4XH0 ADP 2.05882
26 4NZN 2OU 2.12121
27 4NZN ANP 2.12121
28 1TQP ATP 2.12766
29 4TWP AXI 2.21402
30 5ZCT ANP 2.28758
31 2R5T ANP 2.35294
32 2IO8 ADP 2.35294
33 3VOT ADP 2.35294
34 1KJ8 GAR 2.35294
35 1KJ8 ATP 2.35294
36 5DRB 5FJ 2.4055
37 3FSY SCA 2.40964
38 1JPA ANP 2.5641
39 4BV6 FAD 2.64706
40 3A28 NAD 2.71318
41 1U1F 183 2.73438
42 4KS7 X4Z 2.73973
43 2Q7V FAD 2.76923
44 2ICY UPG 2.94118
45 1R37 NAD 2.94118
46 1EHI ADP 2.94118
47 4NFE BEN 2.95359
48 6GNC FAD 3.06122
49 6CI9 NAP 3.0888
50 3VPC ADP 3.19149
51 5J6Y BGC 3.19149
52 5J6Y GLC 3.19149
53 5LY1 PPI 3.23529
54 2VQD AP2 3.23529
55 4PZ6 GMP 3.23529
56 3WO0 ADP 3.23529
57 3WO0 ALA 3.23529
58 4L3L 5FI 3.28947
59 4NBT NAD 3.33333
60 3AY6 NAI 3.34572
61 1MFI FHC 3.50877
62 6HTO MET 3.52941
63 6HTO 5AD 3.52941
64 3TWO NDP 3.52941
65 1T36 ADP 3.52941
66 6A1G 9OL 3.52941
67 5A5W GUO 3.55731
68 4YMJ 4EJ 3.61842
69 3HAV ATP 3.67893
70 1VKF CIT 3.7234
71 2GQR ADP 3.79747
72 4FHD EEM 3.82353
73 4FHD 0TT 3.82353
74 1PK8 ATP 3.82353
75 5G48 1FL 3.82353
76 3V8S 0HD 3.82353
77 2VPQ ANP 3.82353
78 4ZGP ADP 4.09556
79 1M0W ANP 4.11765
80 1I7L ATP 4.20712
81 4WW7 AMP 4.27807
82 4Y0X ADP 4.41176
83 2YW2 ATP 4.41176
84 3GD4 FAD 4.69667
85 3X0V FAD 4.70588
86 1TV5 FMN 5
87 3WLE NAD 5
88 2XOC ADP 5.36398
89 4EN4 GT1 5.44872
90 4EN4 ATP 5.44872
91 4EN4 GT0 5.44872
92 2JKG PRO PRO PRO PRO PRO PRO PRO PRO 5.58659
93 3SLS ANP 5.59211
94 2QX0 PH2 5.66038
95 2JHF NAD 5.88235
96 5C1P ADP 5.88235
97 5C1P DAL DAL 5.88235
98 4EUU BX7 5.95611
99 1S5O 152 6.17647
100 2HGS ADP 6.17647
101 1JG9 GLC 6.17647
102 1RE8 BD2 6.17647
103 2QCS ANP 6.17647
104 3FHI ANP 6.17647
105 3GQI ACP 6.19469
106 4WB7 ATP 6.47059
107 3KAL ADP 6.47059
108 6FL8 TIY 6.47059
109 6FL8 ADP 6.47059
110 4U0O MTA 6.75676
111 1Z2P I3S 6.79012
112 1Z2P ACP 6.79012
113 3TKI S25 6.81115
114 1U1J MET 7.05882
115 4DC2 ADE 7.14286
116 5DZT AMP 7.64706
117 2IF8 ADP 7.64706
118 4LRJ ANP 7.69231
119 1JBU BEN 7.93651
120 4XZ3 ACP 7.94118
121 2PUL ACP 7.94118
122 3ETH ATP 8.52941
123 5ML3 DL3 8.72483
124 2Q7D ANP 8.82353
125 5K2M ADP 9.43396
126 1UPR 4IP 9.7561
127 3T7V SAM 10
128 1NJJ GET 10
129 6BXI ANP 10.5105
130 3VPB ADP 10.7143
131 1QO8 FAD 10.8824
132 4NBU NAI 11.6
133 4NJH 2K8 11.7391
134 4NJH SAM 11.7391
135 1IOW ADP 12.0915
136 1IOW PHY 12.0915
137 5TH5 MET 12.1673
138 5TH5 7C5 12.1673
139 3RFA SAM 13.5294
140 4WCX SAM 14.1176
141 4JYD SAH 15
142 3LQV ADE 15.3846
143 5WGG SAM 16.7647
144 4M7T SAM 18.8889
145 5EXK 5AD 21.7523
146 5LXT ACP 24.4755
147 3C8F MT2 24.898
148 5VSM MET 32.0755
149 5VSM 5AD 32.0755
150 1O9U ADZ 33.3333
151 4K37 SAM 36.1765
152 4K38 SAM 36.1765
153 4K39 SAM 36.1765
Pocket No.: 4; Query (leader) PDB : 2FB3; Ligand: MET; Similar sites found with APoc: 113
This union binding pocket(no: 4) in the query (biounit: 2fb3.bio1) has 16 residues
No: Leader PDB Ligand Sequence Similarity
1 4GKV NAD 1.19048
2 2CSN CKI 1.3468
3 6GAS FAD 1.51057
4 3NKS FAD 1.76471
5 5K0A FAD 1.81818
6 1YY5 FAD 2.05882
7 4IZY 1J2 2.05882
8 5ICE SAH 2.05882
9 3LZW FAD 2.10843
10 4ZS4 ATP 2.28013
11 5YLT SFG 2.28137
12 5GT9 NAP 2.28137
13 5MY8 RXZ 2.35294
14 1GQG DCD 2.35294
15 3LXN MI1 2.51572
16 4QMN DB8 2.58065
17 3E5A VX6 2.61194
18 1LLU NAD 2.64706
19 2WET FAD 2.64706
20 4GJ3 0XP 2.64901
21 4NTC FAD 2.68657
22 1NFQ NAI 2.69231
23 6CQF F97 2.6936
24 2PVF ACP 2.69461
25 1GEG NAD 2.73438
26 5XWV NDP 2.94118
27 4CLI 5P8 3.0581
28 1ZBQ NAD 3.0581
29 2Q2V NAD 3.13725
30 1XL8 152 3.23529
31 5VLQ ANP 3.23529
32 4Y93 746 3.23529
33 1XHC FAD 3.23529
34 4PU5 ANP 3.23529
35 3AY6 BGC 3.34572
36 3ALN ANP 3.36391
37 2BD0 NAP 3.68852
38 2GQS ADP 3.79747
39 4REP FAD 3.82353
40 2V58 LZJ 3.82353
41 2JLD AG1 3.82353
42 4HXY NDP 3.82353
43 3X01 AMP 3.82353
44 2AE2 NAP 3.84615
45 2AE2 PTO 3.84615
46 4YUW S4M 3.94737
47 4YUW 4JU 3.94737
48 1ZY5 ANP 3.9604
49 3QWI NAP 4.07407
50 2ZUX RAM 4.11765
51 2GDZ NAD 4.11985
52 3NY4 SMX 4.15094
53 1AUX AGS 4.18006
54 5LPZ ADP 4.21687
55 1AE1 NAP 4.3956
56 5OC1 FAD 4.41176
57 2PVN P63 4.41176
58 2BPM 529 4.53074
59 2YAK OSV 4.5614
60 5J60 FAD 4.6875
61 2RGJ FAD 4.70588
62 2C5A GDC 5
63 2C5A NAD 5
64 1IA9 ANP 5
65 2GZ3 NAP 5.29412
66 5NA1 FAD 5.29412
67 6AC9 ANP 5.29412
68 2ABS ACP 5.29412
69 4WO4 JLS 5.31401
70 3TM0 B31 5.32319
71 3TM0 ANP 5.32319
72 1N07 FMN 5.52147
73 4BFM ANP 5.68862
74 5B4T 3HR 5.76923
75 5B4T NAD 5.76923
76 1E4E ADP 5.88235
77 5KO1 6UY 6.00707
78 4A4X JUP 6.09319
79 1COY FAD 6.17647
80 4WB6 ATP 6.17647
81 2GU8 796 6.23145
82 2YVJ FAD 6.42202
83 1H2T GDP 7MG 6.47059
84 3UDZ ADP 6.47059
85 5DEY 59T 6.73401
86 4QTB 38Z 6.76471
87 3DNT ATP 7.05882
88 3ITJ FAD 7.10059
89 6G9I CXX 7.14286
90 6E8I PTR 7.69231
91 5OJI ISN 7.69231
92 5HCY 60D 7.85498
93 1IY8 NAD 7.86517
94 3MVH WFE 7.94118
95 4PNI KQQ 7.94118
96 5UPK ANP 8.33333
97 2I8T GDD 8.98204
98 3LOO B4P 9.41177
99 5WO4 B7V 9.93377
100 1JNR FAD 10
101 6C7Y ADP 10.4895
102 3ZS7 ATP 10.6667
103 4J56 FAD 11.4035
104 4YSX FAD 11.4706
105 4XW2 SIM 12.1212
106 1FP2 HMO 12.6471
107 4E1Z 0MX 12.7148
108 3TTI KBI 13.2353
109 4WHZ 3NL 13.2353
110 4CS4 AXZ 15.3285
111 1OX5 1PR 15.8824
112 3WDM ADN 18.3908
113 4Q5H ANP 26.3158
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