Receptor
PDB id Resolution Class Description Source Keywords
1RWC 1.9 Å EC: 4.2.2.5 CRYSTAL STRUCTURE OF ARTHROBACTER AURESCENS CHONDROITIN AC L ARTHROBACTER AURESCENS CHONDROITIN LYASE CHONDROITINASE HYALURONAN LYASE
Ref.: HIGH-RESOLUTION CRYSTAL STRUCTURE OF ARTHROBACTER A CHONDROITIN AC LYASE: AN ENZYME-SUBSTRATE COMPLEX D THE CATALYTIC MECHANISM J.MOL.BIOL. V. 337 367 2004
Ligand
Ligand Chain:Residue Validity Ligand Warnings Binding Data NGL Viewer Molecular Weight (Da) Formula SMILES
GOL A:801;
 Invalid;
 none;
 submit data
92.094 C3 H8 O3 C(C(C...
NA A:900;
 Part of Protein;
 none;
 submit data
22.99 Na [Na+]
NAG GAD B:1;
 Valid;
 none;
 submit data
378.31 n/a O=C(N...
PO4 A:850;
 Invalid;
 none;
 submit data
94.971 O4 P [O-]P...
View in 3D viewer
90% Homology Family
Leader
PDB id Resolution Class Description Source Keywords
1RWH 1.25 Å EC: 4.2.2.5 CRYSTAL STRUCTURE OF ARTHROBACTER AURESCENS CHONDROITIN AC L COMPLEX WITH CHONDROITIN TETRASACCHARIDE ARTHROBACTER AURESCENS CHONDROITINASE CHONDROITIN CHONDROITIN LYASE LYASE
Ref.: HIGH-RESOLUTION CRYSTAL STRUCTURE OF ARTHROBACTER A CHONDROITIN AC LYASE: AN ENZYME-SUBSTRATE COMPLEX D THE CATALYTIC MECHANISM J.MOL.BIOL. V. 337 367 2004
Members (4)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 2 families.
1 1RWH - ASG GCT ASG GAD n/a n/a
2 1RWF - ASG GCT ASG GAD n/a n/a
3 1RWC - NAG GAD n/a n/a
4 1RWG - ASG GCT ASG GAD n/a n/a
70% Homology Family (4)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 2 families.
1 1RWH - ASG GCT ASG GAD n/a n/a
2 1RWF - ASG GCT ASG GAD n/a n/a
3 1RWC - NAG GAD n/a n/a
4 1RWG - ASG GCT ASG GAD n/a n/a
50% Homology Family (6)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 2 families.
1 2WDA - ASG GCD n/a n/a
2 2WCO - NAG GC4 n/a n/a
3 1RWH - ASG GCT ASG GAD n/a n/a
4 1RWF - ASG GCT ASG GAD n/a n/a
5 1RWC - NAG GAD n/a n/a
6 1RWG - ASG GCT ASG GAD n/a n/a
Polypharmacology
Similar Ligands
Ligand no: 1; Ligand: NAG GAD; Similar ligands found: 39
No: Ligand ECFP6 Tc MDL keys Tc
1 GCD NGA 1 1
2 NGA GCD 1 1
3 NAG GAD 1 1
4 GCD NAG 1 1
5 GAD NDG 1 1
6 UCD 0.782609 0.979592
7 NG6 GCD 0.746667 0.75
8 GCD NG6 0.746667 0.75
9 NGK GCD 0.692308 0.734375
10 GCD ASG 0.692308 0.734375
11 GCD 8EX 0.607143 0.707692
12 GAL A2G 0.577465 0.88
13 NAG GAL 0.577465 0.88
14 GAL NAG 0.577465 0.88
15 GAL NGA 0.577465 0.88
16 NAG BDP 0.552632 0.959184
17 L42 0.547619 0.707692
18 HS2 0.5375 0.959184
19 NAG NGA 0.533333 0.865385
20 NAG A2G 0.533333 0.865385
21 ASG BDP ASG GCD 0.529412 0.701493
22 GC4 NAG 0.525 0.92
23 BGC RAM BGC GAD 0.494624 0.76
24 RAM GAD 0.486842 0.632653
25 DR3 0.470588 0.862745
26 NAG BDP NAG BDP 0.464646 0.924528
27 BEM MAV 0.461538 0.632653
28 NAG BDP NAG BDP NAG BDP 0.460784 0.942308
29 NAG BDP NAG BDP NAG BDP NAG 0.442105 0.903846
30 NAG A2G GAL 0.438202 0.865385
31 AMU 0.434211 0.84
32 ACY 1GN GAL 1GN BGC ACY GAL BGC 0.43299 0.865385
33 1GN ACY GAL ACY 1GN BGC GAL BGC 0.43299 0.865385
34 AQA RAM GTR 0.426966 0.653061
35 MAW BEM BEM BEM 0.413793 0.62
36 MAW LGU BEM BEM 0.413793 0.62
37 BEM MAV LGU MAV 0.413793 0.62
38 MAW MAV GCU 0.413793 0.62
39 H3S 0.402174 0.661765
Similar Binding Sites (Proteins are less than 50% similar to leader) APoc FAQ
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