Receptor
PDB id Resolution Class Description Source Keywords
1QKZ 1.95 Å NON-ENZYME: IMMUNE FAB FRAGMENT (MN14C11.6) IN COMPLEX WITH A PEPTIDE ANTIGEN DERIVED FROM NEISSERIA MENINGITIDIS P1.7 SEROSUBTYPE A NTIGEN AND DOMAIN II FROM STREPTOCOCCAL PROTEIN G MUS MUSCULUS IMMUNE SYSTEM FAB PORA NEISSERIA MENINGITIDIS PORIN
Ref.: CRYSTAL STRUCTURE OF AN FAB FRAGMENT IN COMPLEX WITH A MENINGOCOCCAL SEROSUBTYPE ANTIGEN AND A PROTEIN G DOMAIN J.MOL.BIOL. V. 293 81 1999
Ligand
Ligand Chain:Residue Validity Ligand Warnings Binding Data NGL Viewer Molecular Weight (Da) Formula SMILES
ALA ASN GLY GLY ALA SER GLY GLN VAL LYS P:1;
 Valid;
 none;
 submit data
888.958 n/a O=C([...
View in 3D viewer
90% Homology Family
Leader
PDB id Resolution Class Description Source Keywords
1QKZ 1.95 Å NON-ENZYME: IMMUNE FAB FRAGMENT (MN14C11.6) IN COMPLEX WITH A PEPTIDE ANTIGEN DERIVED FROM NEISSERIA MENINGITIDIS P1.7 SEROSUBTYPE A NTIGEN AND DOMAIN II FROM STREPTOCOCCAL PROTEIN G MUS MUSCULUS IMMUNE SYSTEM FAB PORA NEISSERIA MENINGITIDIS PORIN
Ref.: CRYSTAL STRUCTURE OF AN FAB FRAGMENT IN COMPLEX WITH A MENINGOCOCCAL SEROSUBTYPE ANTIGEN AND A PROTEIN G DOMAIN J.MOL.BIOL. V. 293 81 1999
Members (1)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 225 families.
1 1QKZ - ALA ASN GLY GLY ALA SER GLY GLN VAL LYS n/a n/a
70% Homology Family (10)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 67 families.
1 6PXH - DHF C19 H21 N7 O6 c1cc(ccc1C....
2 6C5K Kd = 68.5 nM GP1 Z9M KDO KDO KDO n/a n/a
3 1QKZ - ALA ASN GLY GLY ALA SER GLY GLN VAL LYS n/a n/a
4 2HVK - TBA C16 H36 N CCCC[N+](C....
5 4MA7 - P2Z C17 H20 N2 S CN(C)CCCN1....
6 4UUJ - XA7 C24 H52 N CCCCCC[N+]....
7 6NFV - 1EM C26 H50 O5 CCCCCCCCCC....
8 6NFU - 1EM C26 H50 O5 CCCCCCCCCC....
9 2DWE - TBA C16 H36 N CCCC[N+](C....
10 1MJJ Kd = 1.83 nM HAL C23 H29 N2 O7 P c1ccc(cc1)....
50% Homology Family (1)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 45 families.
1 1QKZ - ALA ASN GLY GLY ALA SER GLY GLN VAL LYS n/a n/a
Polypharmacology
Similar Ligands (2D)
Ligand no: 1; Ligand: ALA ASN GLY GLY ALA SER GLY GLN VAL LYS; Similar ligands found: 17
No: Ligand ECFP6 Tc MDL keys Tc
1 ALA ASN GLY GLY ALA SER GLY GLN VAL LYS 1 1
2 GLY ALA ASP GLY VAL GLY LYS SER ALA 0.471545 0.979167
3 GLY ALA ASP GLY VAL GLY LYS SER ALA LEU 0.457364 0.959184
4 ALA GLY SER VAL GLU GLN TPO PRO LYS LYS 0.440789 0.691176
5 LYS LEU VAL VAL VAL GLY ALA VAL GLY VAL 0.433333 0.816327
6 LYS LEU VAL VAL GLY ALA VAL GLY VAL 0.433333 0.816327
7 LEU GLY GLY ALA LYS GLN ARG GLY ASP VAL 0.429688 0.745455
8 LYS LEU VAL ALA LEU GLY ILE ASN ALA VAL 0.421053 0.86
9 LYS LEU VAL GLN LEU LEU THR THR THR 0.418033 0.88
10 LYS GLN LYS 0.417476 0.734694
11 GLN ALA SER GLN GLU VAL LYS ASN TRP 0.417219 0.766667
12 SER GLN LEU LYS ASN ASN ALA LYS GLU ILE 0.416667 0.884615
13 GLN VAL ASN PHE LEU GLY LYS 0.416058 0.811321
14 LYS VAL LYS 0.411765 0.77551
15 ALA LYS ALA SER GLN ALA ALA 0.410256 0.875
16 GLN ALA SER GLN ASP VAL LYS ASN TRP 0.407895 0.766667
17 GLU LYS VAL HIS VAL GLN 0.401515 0.689655
Similar Ligands (3D)
Ligand no: 1; Ligand: ALA ASN GLY GLY ALA SER GLY GLN VAL LYS; Similar ligands found: 0
No: Ligand Similarity coefficient
Similar Binding Sites (Proteins are less than 50% similar to leader) APoc FAQ
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