Receptor
PDB id Resolution Class Description Source Keywords
1P4N 1.9 Å EC: 2.3.2.10 CRYSTAL STRUCTURE OF WEISSELLA VIRIDESCENS FEMX:UDP-MURNAC- PENTAPEPTIDE COMPLEX WEISSELLA VIRIDESCENS FEMX TRANSFERASE-TRANSFERASE SUBSTRATE COMPLEX
Ref.: CRYSTAL STRUCTURES OF WEISSELLA VIRIDESCENS FEMX AN COMPLEX WITH UDP-MURNAC-PENTAPEPTIDE: INSIGHTS INTO FAMILY SUBSTRATES RECOGNITION. STRUCTURE V. 12 257 2004
Ligand
Ligand Chain:Residue Validity Ligand Warnings Binding Data NGL Viewer Molecular Weight (Da) Formula SMILES
GOL A:341;
A:342;
Invalid;
Invalid;
none;
none;
submit data
92.094 C3 H8 O3 C(C(C...
MG A:401;
A:582;
A:683;
Part of Protein;
Part of Protein;
Part of Protein;
none;
none;
none;
submit data
24.305 Mg [Mg+2...
UMA FGA LYS DAL DAL B:336;
Valid;
none;
submit data
1134.95 n/a P(=O)...
View in 3D viewer
90% Homology Family
Leader
PDB id Resolution Class Description Source Keywords
4II9 1.66 Å EC: 2.3.2.10 CRYSTAL STRUCTURE OF WEISSELLA VIRIDESCENS FEMXVV NON-RIBOSO ACID TRANSFERASE IN COMPLEX WITH A PEPTIDYL-RNA CONJUGATE WEISSELLA VIRIDESCENS FEMX PEPTIDOGLYCAN TRANSFERASE PEPTIDYL-RNA CONJUGATE COMTRANSFERASE-PEPTIDE-RNA COMPLEX
Ref.: THE STRUCTURE OF FEMXWV IN COMPLEX WITH A PEPTIDYL-CONJUGATE: MECHANISM OF AMINOACYL TRANSFER FROM ALA-TRNA(ALA) TO PEPTIDOGLYCAN PRECURSORS ANGEW.CHEM.INT.ED.ENGL. V. 52 7278 2013
Members (2)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 1 families.
1 1P4N - UMA FGA LYS DAL DAL n/a n/a
2 4II9 ic50 = 930 nM UDP ALA FGA CYS DAL DAL MUB C C A9Z n/a n/a
70% Homology Family (2)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 1 families.
1 1P4N - UMA FGA LYS DAL DAL n/a n/a
2 4II9 ic50 = 930 nM UDP ALA FGA CYS DAL DAL MUB C C A9Z n/a n/a
50% Homology Family (2)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 1 families.
1 1P4N - UMA FGA LYS DAL DAL n/a n/a
2 4II9 ic50 = 930 nM UDP ALA FGA CYS DAL DAL MUB C C A9Z n/a n/a
Polypharmacology
Similar Ligands (2D)
Ligand no: 1; Ligand: UMA FGA LYS DAL DAL; Similar ligands found: 16
No: Ligand ECFP6 Tc MDL keys Tc
1 UMA FGA LYS DAL DAL 1 1
2 UAG API 0.654971 0.962025
3 UAG 0.543353 0.9
4 UML 0.541436 0.9625
5 UMA 0.539877 0.85
6 EPZ 0.484663 0.85
7 UDP ALA FGA CYS DAL DAL MUB C C A9Z 0.477551 0.829787
8 EEB 0.45509 0.839506
9 UDP GAL 0.448052 0.848101
10 U21 0.435754 0.869048
11 U20 0.435754 0.869048
12 UD1 0.414634 0.8375
13 UD2 0.414634 0.8375
14 EPU 0.412791 0.817073
15 U22 0.412088 0.892857
16 PMP UD1 0.404255 0.847059
Similar Ligands (3D)
Ligand no: 1; Ligand: UMA FGA LYS DAL DAL; Similar ligands found: 0
No: Ligand Similarity coefficient
Similar Binding Sites (Proteins are less than 50% similar to leader) APoc FAQ
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