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Receptor
PDB id Resolution Class Description Source Keywords
1OJ4 2.01 Å EC: 2.7.1.148 TERNARY COMPLEX OF 4-DIPHOSPHOCYTIDYL-2-C-METHYL-D-ERYTHRITOL KINASE ESCHERICHIA COLI TRANSFERASE KINASE ISOPRENOIDS BIOSYNTHESIS GHMP KINASE SUPERFAMILY TRANSFERASE
Ref.: BIOSYNTHESIS OF ISOPRENOIDS: CRYSTAL STRUCTURE OF 4-DIPHOSPHOCYTIDYL-2C-METHYL-D-ERYTHRITOL KINASE PROC.NATL.ACAD.SCI.USA V. 100 9173 2003
Ligand
Ligand Chain:Residue Validity Ligand Warnings Binding Data NGL Viewer Molecular Weight (Da) Formula SMILES
ANP A:1285;
B:1285;
Valid;
Valid;
none;
none;
submit data
506.196 C10 H17 N6 O12 P3 c1nc(...
CDM A:1284;
B:1284;
Valid;
Valid;
none;
none;
submit data
521.308 C14 H25 N3 O14 P2 C[C@]...
CL A:1286;
Invalid;
none;
submit data
35.453 Cl [Cl-]
View in 3D viewer
90% Homology Family
Leader
PDB id Resolution Class Description Source Keywords
1OJ4 2.01 Å EC: 2.7.1.148 TERNARY COMPLEX OF 4-DIPHOSPHOCYTIDYL-2-C-METHYL-D-ERYTHRITOL KINASE ESCHERICHIA COLI TRANSFERASE KINASE ISOPRENOIDS BIOSYNTHESIS GHMP KINASE SUPERFAMILY TRANSFERASE
Ref.: BIOSYNTHESIS OF ISOPRENOIDS: CRYSTAL STRUCTURE OF 4-DIPHOSPHOCYTIDYL-2C-METHYL-D-ERYTHRITOL KINASE PROC.NATL.ACAD.SCI.USA V. 100 9173 2003
Members (1)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 3 families.
1 1OJ4 - CDM C14 H25 N3 O14 P2 C[C@](CO)(....
70% Homology Family (1)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 3 families.
1 1OJ4 - CDM C14 H25 N3 O14 P2 C[C@](CO)(....
50% Homology Family (1)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 3 families.
1 1OJ4 - CDM C14 H25 N3 O14 P2 C[C@](CO)(....
Polypharmacology
Similar Ligands
Ligand no: 1; Ligand: ANP; Similar ligands found: 373
No: Ligand ECFP6 Tc MDL keys Tc
1 ANP 1 1
2 A2D 0.810811 0.945205
3 B4P 0.802632 0.945205
4 AP5 0.802632 0.945205
5 ADP 0.802632 0.972222
6 BA3 0.789474 0.945205
7 AU1 0.782051 1
8 HEJ 0.772152 0.972222
9 ATP 0.772152 0.972222
10 AT4 0.769231 0.933333
11 AN2 0.769231 0.986111
12 5FA 0.7625 0.972222
13 AQP 0.7625 0.972222
14 M33 0.759494 0.932432
15 MAP 0.752941 0.972973
16 ACP 0.75 0.945946
17 AR6 0.740741 0.945205
18 APR 0.740741 0.945205
19 ACQ 0.73494 0.945946
20 AD9 0.731707 0.945946
21 SAP 0.731707 0.921053
22 AGS 0.731707 0.921053
23 A 0.723684 0.944444
24 AMP 0.723684 0.944444
25 ATF 0.717647 0.933333
26 ADX 0.716049 0.851852
27 CA0 0.716049 0.92
28 6YZ 0.709302 0.945946
29 50T 0.707317 0.932432
30 PRX 0.698795 0.87013
31 ABM 0.696203 0.893333
32 AP2 0.679012 0.933333
33 A12 0.679012 0.933333
34 APC 0.678571 0.933333
35 T99 0.674419 0.933333
36 TAT 0.674419 0.933333
37 A22 0.674157 0.958904
38 SRA 0.670886 0.894737
39 SRP 0.670455 0.883117
40 5AL 0.666667 0.906667
41 A1R 0.659341 0.884615
42 ADQ 0.659341 0.92
43 A3R 0.659341 0.884615
44 3OD 0.648936 0.92
45 BIS 0.648936 0.909091
46 5SV 0.648352 0.82716
47 9X8 0.645161 0.896104
48 OAD 0.645161 0.92
49 25L 0.642105 0.958904
50 AMO 0.641304 0.907895
51 G5P 0.636364 0.897436
52 DLL 0.634409 0.906667
53 AHX 0.634409 0.897436
54 00A 0.634409 0.860759
55 ADV 0.632184 0.907895
56 RBY 0.632184 0.907895
57 ADP PO3 0.632184 0.917808
58 NB8 0.631579 0.897436
59 25A 0.630435 0.945205
60 OOB 0.630435 0.906667
61 8QN 0.630435 0.906667
62 G3A 0.626263 0.897436
63 4AD 0.623656 0.896104
64 PAJ 0.623656 0.8625
65 LAD 0.621053 0.839506
66 TXA 0.614583 0.907895
67 1ZZ 0.614583 0.819277
68 ME8 0.614583 0.819277
69 GTA 0.613861 0.864198
70 9ZD 0.612903 0.909091
71 9ZA 0.612903 0.909091
72 3UK 0.610526 0.894737
73 SON 0.604651 0.907895
74 ADP ALF 0.604396 0.848101
75 ALF ADP 0.604396 0.848101
76 PR8 0.604167 0.829268
77 B5V 0.604167 0.883117
78 WAQ 0.604167 0.860759
79 4UV 0.6 0.871795
80 GAP 0.6 0.87013
81 PTJ 0.597938 0.873418
82 FYA 0.597938 0.881579
83 VO4 ADP 0.597826 0.906667
84 ADP VO4 0.597826 0.906667
85 LMS 0.597561 0.829268
86 UP5 0.596154 0.896104
87 FA5 0.59596 0.883117
88 YAP 0.59596 0.871795
89 PAP 0.595506 0.958333
90 A4P 0.59434 0.823529
91 XAH 0.59 0.841463
92 4UU 0.588235 0.871795
93 AFH 0.588235 0.8625
94 9SN 0.585859 0.85
95 2A5 0.58427 0.894737
96 T5A 0.583333 0.821429
97 DQV 0.582524 0.932432
98 NAI 0.580952 0.884615
99 B5M 0.58 0.871795
100 B5Y 0.58 0.871795
101 ITT 0.579545 0.917808
102 ATR 0.577778 0.944444
103 OMR 0.575472 0.831325
104 5AS 0.574713 0.781609
105 YLP 0.571429 0.8
106 48N 0.571429 0.873418
107 AP0 0.570093 0.873418
108 4TC 0.570093 0.873418
109 7D3 0.569767 0.881579
110 ADJ 0.568807 0.831325
111 GNP 0.568421 0.922078
112 9GM 0.568421 0.922078
113 DAL AMP 0.568421 0.881579
114 6V0 0.566038 0.873418
115 TXD 0.566038 0.884615
116 DND 0.566038 0.907895
117 NAX 0.566038 0.851852
118 4UW 0.566038 0.839506
119 NXX 0.566038 0.907895
120 XYA 0.565789 0.821918
121 RAB 0.565789 0.821918
122 ADN 0.565789 0.821918
123 AOC 0.564706 0.8
124 7D4 0.561798 0.881579
125 ADP BMA 0.561224 0.894737
126 TXE 0.560748 0.884615
127 TYM 0.560748 0.883117
128 GA7 0.557692 0.883117
129 YLC 0.555556 0.819277
130 YLB 0.555556 0.8
131 139 0.554545 0.851852
132 5N5 0.551282 0.797297
133 JB6 0.55 0.860759
134 LAQ 0.54717 0.819277
135 F2R 0.544643 0.843373
136 MYR AMP 0.544554 0.797619
137 5CD 0.544304 0.783784
138 A4D 0.544304 0.797297
139 80F 0.54386 0.821429
140 7MD 0.542857 0.864198
141 6AD 0.542553 0.886076
142 A2R 0.541667 0.958904
143 UPA 0.541284 0.884615
144 YLA 0.540541 0.8
145 A A 0.54 0.918919
146 BTX 0.539823 0.821429
147 COD 0.539823 0.793103
148 HFD 0.537634 0.921053
149 G5A 0.537634 0.781609
150 3DH 0.535714 0.753247
151 AYB 0.535714 0.790698
152 CNA 0.535714 0.907895
153 BT5 0.535088 0.811765
154 ATP A A A 0.533981 0.905405
155 IOT 0.531532 0.811765
156 MTA 0.53012 0.753247
157 3AM 0.529412 0.90411
158 A3P 0.52809 0.944444
159 PPS 0.526316 0.851852
160 NAD 0.526316 0.906667
161 EP4 0.52439 0.734177
162 7D5 0.52381 0.855263
163 AMP DBH 0.52381 0.87013
164 J7C 0.522727 0.75
165 A5A 0.520833 0.809524
166 EAD 0.520661 0.851852
167 TSB 0.520408 0.821429
168 AHZ 0.518519 0.797619
169 DTA 0.518072 0.766234
170 M2T 0.518072 0.716049
171 A3D 0.517241 0.894737
172 6RE 0.517241 0.740741
173 YLY 0.516949 0.790698
174 SSA 0.515464 0.802326
175 NA7 0.514852 0.933333
176 ARG AMP 0.514019 0.809524
177 AR6 AR6 0.514019 0.893333
178 7MC 0.513514 0.843373
179 A2P 0.511111 0.930556
180 52H 0.510204 0.781609
181 VMS 0.510204 0.790698
182 54H 0.510204 0.790698
183 TYR AMP 0.509434 0.848101
184 TAD 0.509259 0.8625
185 NAQ 0.508333 0.85
186 A3N 0.505618 0.766234
187 AV2 0.505155 0.893333
188 53H 0.50505 0.781609
189 5CA 0.50505 0.802326
190 8X1 0.50505 0.755556
191 ARU 0.504951 0.839506
192 ZID 0.504132 0.894737
193 P1H 0.504 0.831325
194 NAE 0.5 0.871795
195 3AT 0.5 0.945205
196 AVV 0.5 0.873418
197 P5A 0.495146 0.747253
198 NSS 0.49505 0.802326
199 LSS 0.49505 0.764045
200 DSZ 0.49505 0.802326
201 N0B 0.491803 0.8
202 AF3 ADP 3PG 0.491071 0.817073
203 NVA LMS 0.490196 0.755556
204 DAT 0.489362 0.881579
205 IMO 0.488889 0.90411
206 ZAS 0.488636 0.792208
207 FDA 0.488372 0.813953
208 NAJ PZO 0.487395 0.85
209 4TA 0.487179 0.788235
210 LPA AMP 0.486486 0.797619
211 LEU LMS 0.485437 0.755556
212 DTP 0.484536 0.881579
213 V3L 0.484536 0.945205
214 S4M 0.483516 0.651685
215 GJV 0.483516 0.731707
216 DZD 0.483051 0.8625
217 2AM 0.482759 0.917808
218 5AD 0.481013 0.726027
219 GSU 0.480769 0.781609
220 KAA 0.480769 0.755556
221 NDE 0.480315 0.907895
222 M24 0.479339 0.851852
223 MAO 0.478261 0.761905
224 NEC 0.477778 0.727273
225 DSH 0.477778 0.707317
226 FAS 0.477273 0.831325
227 FAD 0.477273 0.831325
228 RGT 0.476636 0.933333
229 9K8 0.47619 0.698925
230 G A A A 0.474576 0.85
231 0WD 0.474576 0.897436
232 FNK 0.474074 0.786517
233 5X8 0.473684 0.74359
234 6FA 0.473282 0.821429
235 NDC 0.472868 0.85
236 FB0 0.472868 0.786517
237 YSA 0.472222 0.781609
238 7DD 0.468085 0.958333
239 OVE 0.466667 0.881579
240 MHZ 0.463158 0.701149
241 8PZ 0.462963 0.802326
242 A G 0.462185 0.860759
243 AMP NAD 0.462185 0.881579
244 A3G 0.461538 0.779221
245 NAJ PYZ 0.459677 0.809524
246 6C6 0.459184 0.858974
247 SFG 0.458333 0.730769
248 U A G G 0.458333 0.860759
249 7D7 0.45679 0.723684
250 128 0.45614 0.8
251 SFD 0.455224 0.736842
252 6IA 0.454545 0.817073
253 DDS 0.454545 0.855263
254 GDP 0.454545 0.896104
255 ODP 0.453782 0.886076
256 NJP 0.453782 0.921053
257 7DT 0.453608 0.958333
258 A7D 0.452632 0.75641
259 Z5A 0.452381 0.802326
260 WSA 0.452174 0.790698
261 U A 0.45082 0.884615
262 7C5 0.45045 0.797468
263 FAY 0.449275 0.841463
264 NDP 0.449153 0.897436
265 SA8 0.44898 0.690476
266 A5D 0.44898 0.766234
267 71V 0.446809 0.884615
268 GGZ 0.446602 0.804878
269 RFL 0.446043 0.802326
270 2SA 0.445545 0.907895
271 SAI 0.444444 0.716049
272 GP3 0.444444 0.897436
273 SAH 0.444444 0.725
274 PO4 PO4 A A A A PO4 0.443396 0.878378
275 A A A 0.443396 0.881579
276 4YB 0.442478 0.764045
277 SMM 0.441176 0.670455
278 S7M 0.441176 0.674419
279 GTP 0.441176 0.896104
280 Y3J 0.440476 0.706667
281 SAM 0.44 0.674419
282 649 0.439655 0.747253
283 12D 0.438596 0.809524
284 A3S 0.4375 0.789474
285 NPW 0.436975 0.864198
286 GCP 0.436893 0.873418
287 AAT 0.435644 0.690476
288 GNH 0.435644 0.909091
289 EEM 0.435644 0.674419
290 ETB 0.435484 0.813953
291 DCA 0.435484 0.804598
292 N6P 0.433962 0.890411
293 NZQ 0.433333 0.886076
294 TXP 0.433333 0.897436
295 PGS 0.43299 0.860759
296 APU 0.432203 0.871795
297 PUA 0.432 0.8625
298 62F 0.431655 0.841463
299 F2N 0.431507 0.795455
300 DA 0.430108 0.855263
301 D5M 0.430108 0.855263
302 J7V 0.429688 0.813953
303 NIA 0.428571 0.848101
304 COA 0.428571 0.804598
305 6K6 0.428571 0.905405
306 A3T 0.428571 0.8
307 0T1 0.428571 0.804598
308 P5F 0.427586 0.804598
309 AAM 0.425532 0.944444
310 0UM 0.424528 0.682353
311 8Q2 0.423729 0.775281
312 G1R 0.423077 0.884615
313 AMZ 0.422222 0.891892
314 C2R 0.422222 0.88
315 A U 0.420168 0.848101
316 IDP 0.42 0.894737
317 GSP 0.419048 0.851852
318 30N 0.418605 0.736842
319 CAO 0.418605 0.777778
320 DG1 0.418605 0.897436
321 1DG 0.418605 0.897436
322 COS 0.418605 0.786517
323 AMX 0.418605 0.813953
324 TM1 0.418182 0.797619
325 A6D 0.416667 0.746988
326 K15 0.416667 0.666667
327 V1N 0.415929 0.893333
328 CMX 0.415385 0.804598
329 SCO 0.415385 0.804598
330 GEK 0.415094 0.719512
331 XNP 0.414634 0.851852
332 NHD 0.414634 0.881579
333 9JJ 0.413793 0.841463
334 AIR 0.413793 0.876712
335 COK 0.413534 0.786517
336 G2R 0.412844 0.8625
337 ACO 0.412214 0.777778
338 FAM 0.412214 0.786517
339 FCX 0.412214 0.777778
340 NAP 0.410853 0.92
341 FA9 0.409396 0.843373
342 SXZ 0.409091 0.694118
343 HAX 0.409091 0.806818
344 TAP 0.407692 0.884615
345 2MC 0.407407 0.752688
346 62X 0.407407 0.651685
347 GKE 0.40708 0.8625
348 GDC 0.40708 0.8625
349 GDD 0.40708 0.8625
350 3KK 0.406015 0.786517
351 FYN 0.406015 0.804598
352 NVA 2AD 0.405941 0.740741
353 NA0 0.40458 0.907895
354 101 0.404255 0.855263
355 G 0.40404 0.883117
356 5GP 0.40404 0.883117
357 HDV 0.403846 0.87013
358 MGP 0.403846 0.8625
359 OXK 0.402985 0.786517
360 MCD 0.402985 0.786517
361 CA6 0.402985 0.714286
362 SOP 0.402985 0.786517
363 3AD 0.402299 0.783784
364 S8M 0.401869 0.78481
365 YE1 0.40146 0.795455
366 NMX 0.4 0.782609
367 7RP 0.4 0.902778
368 2VA 0.4 0.779221
369 1VU 0.4 0.777778
370 CO6 0.4 0.786517
371 CMC 0.4 0.786517
372 6G0 0.4 0.8625
373 GMV 0.4 0.873418
Ligand no: 2; Ligand: CDM; Similar ligands found: 50
No: Ligand ECFP6 Tc MDL keys Tc
1 CDM 1 1
2 C2G 0.795181 0.933333
3 CDP 0.695122 0.894737
4 HF4 0.690476 0.894737
5 CTP 0.690476 0.894737
6 7XL 0.678161 0.921053
7 CAR 0.621951 0.881579
8 C5P 0.621951 0.881579
9 C 0.621951 0.881579
10 C5G 0.614583 0.896104
11 CDC 0.610526 0.833333
12 CXY 0.591837 0.896104
13 1AA 0.561905 0.839506
14 PMT 0.535714 0.878049
15 C C C C 0.53 0.87013
16 91P 0.521739 0.793103
17 CTN 0.518519 0.813333
18 AR3 0.518519 0.813333
19 C C 0.515152 0.857143
20 MCN 0.512821 0.764045
21 2AA 0.512821 0.70297
22 GPC 0.495868 0.764045
23 FN5 0.495726 0.876543
24 I5A 0.493976 0.753247
25 C3P 0.483146 0.868421
26 PCD 0.48 0.731183
27 CSF 0.479339 0.876543
28 CSQ 0.477064 0.860759
29 CSV 0.477064 0.860759
30 C5P SIA 0.451613 0.897436
31 G C 0.447154 0.77907
32 DCP 0.44 0.858974
33 16B 0.43617 0.825
34 C2P 0.434783 0.881579
35 GTF 0.431373 0.8125
36 YYY 0.428571 0.858974
37 UTP 0.428571 0.842105
38 UDP 0.427083 0.842105
39 DKZ 0.417582 0.7125
40 GCQ 0.415842 0.8125
41 G G G C 0.415385 0.770115
42 UPP 0.415094 0.820513
43 UDH 0.415094 0.85
44 A G C C 0.412214 0.767442
45 U A C C 0.410853 0.785714
46 A C A C 0.410853 0.797619
47 CG2 0.404762 0.811765
48 5HM 0.402062 0.884615
49 UNP 0.401961 0.820513
50 G C C C 0.4 0.77907
Similar Binding Sites (Proteins are less than 50% similar to leader)
Pocket No.: 1; Query (leader) PDB : 1OJ4; Ligand: ANP; Similar sites found with APoc: 170
This union binding pocket(no: 1) in the query (biounit: 1oj4.bio2) has 20 residues
No: Leader PDB Ligand Sequence Similarity
1 4LTN NAI None
2 5EO8 TFU 1.41343
3 4R2I ANP 1.42857
4 1U3G ADP 1.5873
5 1U3G THF 1.5873
6 1OXV ANP 1.76678
7 1U6R IOM 1.76678
8 1OVD ORO 1.76678
9 1OVD FMN 1.76678
10 5A1S FLC 1.76678
11 1VRP IOM 1.76678
12 3LTW HLZ 1.78571
13 4KFU ACP 1.88679
14 1JJ7 ADP 1.92308
15 2ZXI FAD 2.12014
16 6F97 FAD 2.12014
17 4AG5 ADP 2.12014
18 2MBR EPU 2.12014
19 2MBR FAD 2.12014
20 5K5Z ANP 2.12014
21 3GD8 GOL 2.24215
22 2OG2 MLI 2.4735
23 3B9Q MLI 2.4735
24 4WZ6 ATP 2.4735
25 4KBF AMP 2.4735
26 2V7Y ADP 2.4735
27 5XFV FMN 2.4735
28 1YXM ADE 2.4735
29 3NV6 CAM 2.4735
30 2CBZ ATP 2.53165
31 5U32 GDP 2.54237
32 5GVR LMR 2.5641
33 1AE1 NAP 2.5641
34 5G41 AP5 2.69058
35 1G6H ADP 2.72374
36 4X8O AP5 2.80374
37 4TMK T5A 2.8169
38 2AWN ADP 2.82686
39 3B8I OXL 2.82686
40 5XDT MB3 2.82686
41 3C3N FMN 2.82686
42 5TSH ADP 2.82686
43 1JI0 ATP 2.82686
44 5TSH ANP 2.82686
45 3IAE D7K 2.82686
46 1YBH P22 2.82686
47 3UN3 G16 2.82686
48 1VHT BA3 2.82686
49 4MOP 2H5 2.82686
50 5K0A FAD 2.82686
51 2UZ1 TPP 2.82686
52 4E03 ADP 2.91262
53 2PZE ATP 3.05677
54 2ZE7 DST 3.16206
55 3GJ4 GDP 3.16742
56 3GJ0 GDP 3.16742
57 3GJ3 GDP 3.16742
58 1NAA ABL 3.18021
59 1NAA 6FA 3.18021
60 1RRC ADP 3.18021
61 3B6R CRN 3.18021
62 4LC1 GDP 3.18021
63 4DQ2 BTX 3.18021
64 3P4X ADP 3.18021
65 4Z24 FAD 3.18021
66 3IO3 ADP 3.18021
67 1GXU 2HP 3.2967
68 3TN7 NJP 3.50195
69 4A59 AMP 3.53357
70 3TK1 GDP 3.53357
71 2HHP FLC 3.53357
72 3MD0 GDP 3.53357
73 2GKS ADP 3.53357
74 5ZXD ATP 3.53357
75 4M52 FAD 3.53357
76 1G6O ADP 3.53357
77 4M52 M52 3.53357
78 1IHU ADP 3.53357
79 1XG5 NAP 3.58423
80 1IZC PYR 3.88693
81 2X7I CIT 3.88693
82 2IHU TP9 3.88693
83 2IS6 ADP 3.88693
84 4B63 NAP 3.88693
85 4B63 ORN 3.88693
86 4B63 FAD 3.88693
87 4LHD GLY 3.88693
88 1IIM TTP 3.88693
89 2RGO FAD 3.88693
90 2RGH FAD 3.88693
91 4XFR CIT 3.88693
92 5O74 GDP 3.88889
93 4QM7 GTP 4.09357
94 5HCN GCP 4.21456
95 2NU8 COA 4.38144
96 2GQT FAD 4.47761
97 4YMU ATP 4.54545
98 1YRB GDP 4.58015
99 3V2U ATP 4.59364
100 5EXW 7DT 4.59364
101 3GON ANP 4.59364
102 2UVO NAG 4.67836
103 2UVO NDG 4.67836
104 5BSZ THM 4.947
105 1TAD ALF 4.947
106 1TAD GDP 4.947
107 3ZS9 ADP ALF 4.947
108 2AJ4 ANP 5.30035
109 4UTG ANP 5.30035
110 1CS4 GSP 5.30035
111 3TBK ANP 5.30035
112 1G7C 5GP 5.31915
113 3A4M ADP 5.38462
114 2Q0L FAD 5.65371
115 4RVU NDP 5.65371
116 4C1K PEP 5.72519
117 1JJV ATP 5.82524
118 3W5J GDP 5.88235
119 1ZUI SKM 5.95238
120 2A2C NG1 6.00707
121 2A2C ADP 6.00707
122 4PPF FLC 6.00707
123 2AK5 ARG PRO PRO LYS PRO ARG PRO ARG 6.25
124 1LVG ADP 6.36042
125 4IHQ ADP 7.01754
126 4J56 FAD 7.01754
127 4YJ1 ADP 7.06714
128 4QYS PLR 7.06714
129 5EB4 FAD 7.06714
130 4P8K FAD 7.06714
131 4P8K 38C 7.06714
132 4QYS PLP SEP 7.06714
133 1P72 ADP 7.06714
134 3IID APR 7.109
135 4RFM 3P6 7.14286
136 2D2F ADP 7.2
137 2OFW ADX 7.21154
138 3IHG FAD 7.42049
139 2W58 ADP 7.42574
140 2CDN ADP 7.46269
141 2R42 FPS 7.77385
142 4U00 ADP 7.78689
143 3UIE ANP 8
144 3GJ7 GDP 8.16327
145 2OBM ADP 8.35735
146 4USI AKG 8.44156
147 1B0U ATP 8.83392
148 4YHQ G10 9.09091
149 3CX8 GSP 9.1716
150 1WUU ANP 9.18728
151 1W5F G2P 9.18728
152 5OVK NDP 9.375
153 2R75 01G 9.89399
154 2PID YSA 9.89399
155 5BXQ GDP 10.2362
156 4TM3 FAD 10.6007
157 3LN9 FLC 10.7914
158 5YZ2 AMP 11.1111
159 2CUN 3PG 11.3074
160 2DPY ADP 11.3074
161 4Z7X 3CX 11.7647
162 3GJ8 GDP 11.9565
163 3ZIA ADP 12.6984
164 1JXN MFU 12.8099
165 4CVN ADP 13.6126
166 3H86 AP5 14.0625
167 3GJ5 GDP 14.7059
168 4D0N GDP 14.841
169 1H74 ADP 22.9682
170 1H74 ILE 22.9682
Pocket No.: 2; Query (leader) PDB : 1OJ4; Ligand: CDM; Similar sites found with APoc: 34
This union binding pocket(no: 2) in the query (biounit: 1oj4.bio2) has 19 residues
No: Leader PDB Ligand Sequence Similarity
1 5A1S FLC 1.76678
2 2OWZ CIT 2.12014
3 4V24 GYR 2.4735
4 1XSE NDP 2.4735
5 3EKK GS2 2.82686
6 4Q9N NAI 2.82686
7 3ISN EDM 3.18021
8 3Q9T FAY 3.18021
9 5EZ1 ICB 3.18021
10 3QWI CUE 3.33333
11 6AC9 ANP 3.53357
12 2Q7D ANP 3.53357
13 2VHA GLU 3.88693
14 4XFR CIT 3.88693
15 3OJF IMJ 3.89105
16 3OJF NDP 3.89105
17 2ZAT NAP 4.23077
18 4O08 PO6 4.59364
19 3GON PMV 4.59364
20 3RI1 3RH 4.79233
21 4ANP 3QI 4.947
22 2YIV YIV 4.947
23 5EYK 5U5 5.08475
24 4UTG ANP 5.30035
25 5FFF NAP 5.44747
26 1KTG AMP 6.52174
27 4O0L NDP 6.90909
28 3WXB NDP 7.06714
29 2HFU MEV 8.12721
30 6GSG RCO 10.2473
31 6MDE MEV 13.0742
32 1ONX ASP 17.6678
33 1EZV SMA 17.757
34 2IBZ SMA 17.757
Pocket No.: 3; Query (leader) PDB : 1OJ4; Ligand: CDM; Similar sites found with APoc: 17
This union binding pocket(no: 3) in the query (biounit: 1oj4.bio1) has 17 residues
No: Leader PDB Ligand Sequence Similarity
1 2QB8 ATP 1.76678
2 2WSB NAD 2.75591
3 5AAV GW5 2.77778
4 5JSP DQY 3.48259
5 6F8B CXH 3.88693
6 5FII PHE 3.92157
7 5ZDN CDP 4.73934
8 5GT9 NAP 4.94297
9 3OID NDP 5.03876
10 3IAL PR8 5.65371
11 2ZUX RAM 6.71378
12 5IH1 GDP 7.42049
13 5IH1 6BQ 7.42049
14 2D5X L35 8.90411
15 1NX0 ALA LYS ALA ILE ALA 10.4046
16 5W97 CHD 12.766
17 5ZCO CHD 12.766
Pocket No.: 4; Query (leader) PDB : 1OJ4; Ligand: ANP; Similar sites found with APoc: 36
This union binding pocket(no: 4) in the query (biounit: 1oj4.bio1) has 19 residues
No: Leader PDB Ligand Sequence Similarity
1 4JZ8 CIT 2.12014
2 4DJA DLZ 2.12014
3 4DJA FAD 2.12014
4 3VZS NAP 2.72374
5 3VZS CAA 2.72374
6 3AI8 HNQ 2.73438
7 6H3O FAD 2.82686
8 3CQD ATP 2.82686
9 4B9Q ATP 3.18021
10 5FPE 3TR 3.18021
11 1GZ6 NAI 3.18021
12 2P3V SRT 3.51562
13 5OBY ANP 3.53357
14 5OBU ANP 3.53357
15 1SVK ALF GDP 3.88693
16 2WOX NDP 3.88693
17 1Y3A GDP 3.88693
18 2QS8 MET 4.30622
19 5NM7 GLY 4.51128
20 6EOF ADP 4.59364
21 6ASY ATP 4.59364
22 12AS AMP 4.59364
23 1VDC FAD 5.30035
24 5AHN IMP 5.65371
25 4ARE FLC 6.36042
26 3K7M FAD 6.36042
27 1JLX GAL A2G MBN 7.06714
28 1W55 GPP 7.77385
29 5G5G FAD 7.77385
30 1XAJ NAD 7.77385
31 1XAJ CRB 7.77385
32 6CI9 NAP 8.10811
33 5WSY 7UC 8.67052
34 1RM6 FAD 10.2473
35 5BRT CH9 12.0141
36 2XTZ GSP 20.4947
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