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Receptor
PDB id Resolution Class Description Source Keywords
1OIV 1.98 Å NON-ENZYME: TRANSPORT X-RAY STRUCTURE OF THE SMALL G PROTEIN RAB11A IN COMPLEX WITH GDP HOMO SAPIENS PROTEIN TRANSPORT SMALL G PROTEIN INTRACELLULAR TRAFFICKING GTP-BINDING LIPOPROTEIN
Ref.: THE STRUCTURAL GDP/GTP CYCLE OF RAB11 REVEALS A NOVEL INTERFACE INVOLVED IN THE DYNAMICS OF RECYCLING ENDOSOMES J.BIOL.CHEM. V. 279 11480 2004
Ligand
Ligand Chain:Residue Validity Ligand Warnings Binding Data NGL Viewer Molecular Weight (Da) Formula SMILES
EDO B:1174;
Invalid;
none;
submit data
62.068 C2 H6 O2 C(CO)...
GDP A:1174;
B:1175;
Valid;
Valid;
none;
none;
submit data
443.201 C10 H15 N5 O11 P2 c1nc2...
SO4 A:1175;
Invalid;
none;
submit data
96.063 O4 S [O-]S...
View in 3D viewer
90% Homology Family
Leader
PDB id Resolution Class Description Source Keywords
1OIV 1.98 Å NON-ENZYME: TRANSPORT X-RAY STRUCTURE OF THE SMALL G PROTEIN RAB11A IN COMPLEX WITH GDP HOMO SAPIENS PROTEIN TRANSPORT SMALL G PROTEIN INTRACELLULAR TRAFFICKING GTP-BINDING LIPOPROTEIN
Ref.: THE STRUCTURAL GDP/GTP CYCLE OF RAB11 REVEALS A NOVEL INTERFACE INVOLVED IN THE DYNAMICS OF RECYCLING ENDOSOMES J.BIOL.CHEM. V. 279 11480 2004
Members (2)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 209 families.
1 1YZK - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
2 1OIV - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
70% Homology Family (15)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 175 families.
1 4LHW - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
2 4LHV - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
3 1YZN - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
4 3RWM - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
5 3RWO - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
6 2F9L - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
7 2F9M - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
8 1YZK - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
9 1OIV - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
10 3NKV - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
11 1G17 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
12 1G16 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
13 1OIX - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
14 1OIW - GSP C10 H16 N5 O13 P3 S c1nc2c(n1[....
15 3RAB - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
50% Homology Family (274)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 149 families.
1 1Z2A - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
2 1Z22 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
3 1YZT - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
4 1YZU - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
5 1Z08 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
6 1Z0I - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
7 4DKX - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
8 2Y8E - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
9 2A5J - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
10 4LHW - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
11 4LHV - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
12 2P2L - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
13 2W2V - GTP C10 H16 N5 O14 P3 c1nc2c(n1[....
14 1MH1 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
15 2WKP - FMN C17 H21 N4 O9 P Cc1cc2c(cc....
16 2WKR - FMN C17 H21 N4 O9 P Cc1cc2c(cc....
17 2WKQ - FMN C17 H21 N4 O9 P Cc1cc2c(cc....
18 5WDO - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
19 3TGP - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
20 1P2T - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
21 4Q01 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
22 4M21 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
23 6ARK - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
24 821P - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
25 1Q21 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
26 5VPZ - GSP C10 H16 N5 O13 P3 S c1nc2c(n1[....
27 6F76 - CVK C24 H26 N2 O3 CN(C)Cc1cc....
28 6Q21 - GCP C11 H18 N5 O13 P3 c1nc2c(n1[....
29 4L9W - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
30 4WA7 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
31 3V4F - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
32 3K9N - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
33 5OCO - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
34 4M1T - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
35 4XVQ - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
36 5V71 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
37 5VP7 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
38 2QUZ - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
39 1CLU Kd = 5.4 nM DBG C23 H27 N8 O13 P3 c1ccc(cc1)....
40 4L8G - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
41 5VBM - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
42 2RGD - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
43 4PZY - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
44 4LPK - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
45 4DLV - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
46 4LRW - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
47 2CLD - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
48 4M1W - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
49 3L8Z - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
50 3LBH - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
51 721P - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
52 1LF5 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
53 1GNR - CAG C18 H23 N6 O16 P3 C[C@H](c1c....
54 4LUC - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
55 2RGE - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
56 4DLS - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
57 4M22 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
58 4DLY - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
59 1ZW6 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
60 2RGC - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
61 5VQ1 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
62 5V9L - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
63 2CL0 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
64 4TQA - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
65 3RRZ - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
66 5VPY - 9GM C10 H17 N6 O13 P3 c1nc2c(n1[....
67 2EVW - XY2 C12 H15 N5 O4 CC(=O)N(C)....
68 2RGB - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
69 4LDJ - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
70 1XJ0 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
71 1ZVQ - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
72 5VQ6 - GSP C10 H16 N5 O13 P3 S c1nc2c(n1[....
73 1P2S - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
74 5V6V - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
75 621P - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
76 1P2V - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
77 2CL7 - GTP C10 H16 N5 O14 P3 c1nc2c(n1[....
78 3OIW - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
79 4LV6 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
80 4DLT - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
81 1P2U - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
82 5V6S - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
83 5UK9 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
84 6ASE - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
85 3RS0 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
86 5B30 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
87 5B2Z - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
88 3KKN - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
89 4M1O - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
90 5VQ0 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
91 4M1Y - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
92 5VPI - GTP C10 H16 N5 O14 P3 c1nc2c(n1[....
93 5W22 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
94 3I3S - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
95 4OBE - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
96 3RRY - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
97 1QRA - GTP C10 H16 N5 O14 P3 c1nc2c(n1[....
98 6BP1 - GCP C11 H18 N5 O13 P3 c1nc2c(n1[....
99 4LYJ - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
100 121P - GCP C11 H18 N5 O13 P3 c1nc2c(n1[....
101 1RVD - DBG C23 H27 N8 O13 P3 c1ccc(cc1)....
102 5VBZ - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
103 2RGA - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
104 3RS7 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
105 5UHV - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
106 2CLC - GTP C10 H16 N5 O14 P3 c1nc2c(n1[....
107 4EPT - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
108 4EPY Kd = 340 uM 0QY C21 H21 N5 O c1ccc2c(c1....
109 4DLZ - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
110 1AGP - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
111 1GNQ - CAG C18 H23 N6 O16 P3 C[C@H](c1c....
112 2Q21 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
113 3RS2 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
114 5VQ8 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
115 4L9S - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
116 6B0Y - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
117 4M1S - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
118 4EPV - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
119 5WDP - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
120 4TQ9 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
121 3K8Y - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
122 3OIV - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
123 5OCT - 9R5 C9 H10 Cl N O2 c1cc2c(cc1....
124 5VBE - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
125 4Q02 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
126 3LBI - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
127 3RSL - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
128 1LF0 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
129 1XCM - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
130 421P - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
131 4DLR - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
132 2CE2 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
133 4QL3 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
134 4Q21 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
135 4DLU - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
136 1CTQ - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
137 3OIU - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
138 6B0V - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
139 3RS5 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
140 4EPW - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
141 5WDQ - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
142 1IOZ - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
143 221P - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
144 4LYH - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
145 4DLX - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
146 4Q03 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
147 4PZZ - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
148 3KKM - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
149 1JAI - GCP C11 H18 N5 O13 P3 c1nc2c(n1[....
150 3L8Y - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
151 3RS4 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
152 3LBN - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
153 4NMM - Y9Z C14 H22 N6 O12 P2 CC(=O)NCCO....
154 5VQ2 - GTP C10 H16 N5 O14 P3 c1nc2c(n1[....
155 3RSO - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
156 4XVR - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
157 5P21 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
158 5F2E - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
159 4EPX - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
160 4EPR - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
161 4DLW - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
162 5WHD - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
163 5V9O - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
164 5V9U - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
165 2RGG - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
166 4LYF - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
167 1JAH - GCP C11 H18 N5 O13 P3 c1nc2c(n1[....
168 1YU9 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
169 2BME - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
170 2BMD - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
171 1YZN - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
172 3RWM - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
173 3RWO - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
174 3REG - GSP C10 H16 N5 O13 P3 S c1nc2c(n1[....
175 2F9L - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
176 2F9M - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
177 1YZK - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
178 1OIV - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
179 2FE4 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
180 2FFQ - GSP C10 H16 N5 O13 P3 S c1nc2c(n1[....
181 2E9S - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
182 5US4 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
183 5UQW - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
184 5USJ - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
185 3NKV - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
186 1HUQ - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
187 1Z07 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
188 1N6R - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
189 1Z0D - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
190 1N6H - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
191 1N6P - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
192 1N6K - GDP AF3 n/a n/a
193 1N6N - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
194 1N6I - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
195 1R2Q - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
196 1N6L - GTP C10 H16 N5 O14 P3 c1nc2c(n1[....
197 1N6O - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
198 1TU4 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
199 1EK0 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
200 1S8F - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
201 1YZL - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
202 1WMS - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
203 1D5C - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
204 1Z0F - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
205 3E5H - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
206 4DSU - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
207 4DST - GCP C11 H18 N5 O13 P3 c1nc2c(n1[....
208 4DSO - GSP C10 H16 N5 O13 P3 S c1nc2c(n1[....
209 4DSN - GCP C11 H18 N5 O13 P3 c1nc2c(n1[....
210 5OCG - 9R5 C9 H10 Cl N O2 c1cc2c(cc1....
211 1KAO - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
212 3RAP - GTP C10 H16 N5 O14 P3 c1nc2c(n1[....
213 1YZQ - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
214 2GIL - GTP C10 H16 N5 O14 P3 c1nc2c(n1[....
215 1Z0A - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
216 1KY2 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
217 1KY3 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
218 2HT6 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
219 3KKO - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
220 3KKQ - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
221 3KKP - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
222 1X1R - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
223 1X1S - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
224 1T91 - GTP C10 H16 N5 O14 P3 c1nc2c(n1[....
225 1VG8 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
226 2GCP - GSP C10 H16 N5 O13 P3 S c1nc2c(n1[....
227 2GCN - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
228 3X1Z - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
229 3X1Y - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
230 3X1W - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
231 3X1X - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
232 4Z8Y - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
233 1G17 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
234 1G16 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
235 1M7B - GTP C10 H16 N5 O14 P3 c1nc2c(n1[....
236 2DPX - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
237 3Q7Q - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
238 3Q7P - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
239 3Q72 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
240 1U8Z - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
241 1U90 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
242 1U8Y - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
243 1YVD - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
244 5WDR - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
245 5WDS - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
246 1Z06 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
247 3TH5 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
248 3SBD - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
249 1OIX - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
250 1OIW - GSP C10 H16 N5 O13 P3 S c1nc2c(n1[....
251 2QRZ - GCP C11 H18 N5 O13 P3 c1nc2c(n1[....
252 1A4R Kd = 9.4 pM GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
253 1KMQ - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
254 1DPF - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
255 1FTN - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
256 5A0F - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
257 1A2B - GSP C10 H16 N5 O13 P3 S c1nc2c(n1[....
258 4U5X - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
259 3Q85 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
260 1RYH - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
261 1RYF - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
262 1VG1 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
263 5XC5 - GTP C10 H16 N5 O14 P3 c1nc2c(n1[....
264 5XC3 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
265 3RAB - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
266 1GWN - GTP C10 H16 N5 O14 P3 c1nc2c(n1[....
267 2EW1 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
268 4O25 - GTP C10 H16 N5 O14 P3 c1nc2c(n1[....
269 4O2R - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
270 4O2L - GTP C10 H16 N5 O14 P3 c1nc2c(n1[....
271 6BSX - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
272 5YXH - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
273 1XTQ - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
274 3SEA - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
Polypharmacology
Similar Ligands
Ligand no: 1; Ligand: GDP; Similar ligands found: 161
No: Ligand ECFP6 Tc MDL keys Tc
1 GDP 1 1
2 GTP 0.909091 1
3 GP3 0.881579 0.973684
4 GNH 0.858974 0.986667
5 9GM 0.839506 0.973684
6 GNP 0.839506 0.973684
7 G 0.828947 0.986486
8 5GP 0.828947 0.986486
9 G1R 0.82716 0.986667
10 GCP 0.82716 0.973684
11 GSP 0.817073 0.948718
12 GAV 0.797619 0.961039
13 GMV 0.792683 0.973684
14 G2P 0.77381 0.961039
15 G2R 0.770115 0.961039
16 GP2 0.756098 0.961039
17 GDC 0.747253 0.961039
18 GKE 0.747253 0.961039
19 GDD 0.747253 0.961039
20 GPG 0.741573 0.961039
21 G3D 0.732558 0.986486
22 ALF 5GP 0.729412 0.888889
23 Y9Z 0.728261 0.902439
24 G5P 0.723404 0.973684
25 GFB 0.72043 0.961039
26 GTG 0.72043 0.936709
27 GDR 0.72043 0.961039
28 G4P 0.715909 0.986486
29 G3A 0.712766 0.973684
30 6CK 0.712766 0.936709
31 GDP AF3 0.7 0.888889
32 ALF GDP 0.7 0.888889
33 GDP ALF 0.7 0.888889
34 YGP 0.698925 0.901235
35 GKD 0.697917 0.961039
36 JB2 0.697917 0.961039
37 GDX 0.690722 0.973684
38 GPD 0.690722 0.925
39 GMP 0.684211 0.88
40 0O2 0.666667 0.986486
41 JB3 0.656863 0.948718
42 NGD 0.650485 0.961039
43 DGI 0.636364 0.923077
44 GDP 7MG 0.636364 0.911392
45 U2G 0.634615 0.936709
46 GPX 0.634409 0.946667
47 G G 0.632653 0.948052
48 IDP 0.632184 0.972973
49 2MD 0.632075 0.891566
50 CAG 0.62963 0.880952
51 CG2 0.622642 0.936709
52 FEG 0.619048 0.879518
53 MGD 0.614679 0.891566
54 ZGP 0.613208 0.869048
55 GH3 0.612903 0.973333
56 3GP 0.611765 0.946667
57 MD1 0.607143 0.891566
58 PGD 0.59292 0.925
59 DGT 0.591398 0.923077
60 BGO 0.588785 0.924051
61 TPG 0.582609 0.840909
62 DBG 0.582609 0.948718
63 2GP 0.574713 0.96
64 FE9 0.570175 0.776596
65 GCP G 0.56 0.921053
66 A G 0.553571 0.935065
67 G A A A 0.553571 0.923077
68 MGP 0.553191 0.961039
69 U A G G 0.548673 0.935065
70 G4M 0.548387 0.880952
71 6G0 0.547368 0.961039
72 G1R G1R 0.542373 0.924051
73 P2G 0.527473 0.883117
74 PGD O 0.525 0.850575
75 ADP 0.522222 0.92
76 R5I 0.520833 0.946667
77 R7I 0.520833 0.946667
78 GGM 0.517544 0.901235
79 DGP 0.516484 0.910256
80 DG 0.516484 0.910256
81 P1G 0.516129 0.871795
82 G U 0.513274 0.9
83 G1G 0.508475 0.925
84 IMP 0.505495 0.959459
85 AKW 0.504425 0.890244
86 G C 0.504348 0.9
87 GPC 0.491525 0.879518
88 G7M 0.483871 0.948052
89 6AD 0.479592 0.841463
90 ATP 0.473684 0.92
91 HEJ 0.473684 0.92
92 G2Q 0.471154 0.961039
93 5FA 0.46875 0.92
94 AQP 0.46875 0.92
95 GTA 0.468468 0.936709
96 7DD 0.468085 0.906667
97 G G G RPC 0.466102 0.875
98 SGP 0.463158 0.82716
99 01G 0.462963 0.902439
100 HFD 0.459184 0.873418
101 B4P 0.457447 0.894737
102 AP5 0.457447 0.894737
103 A2D 0.456522 0.894737
104 6YZ 0.455446 0.896104
105 G G G C 0.455285 0.9125
106 5GP 5GP 0.454545 0.883117
107 ANP 0.454545 0.896104
108 ACQ 0.454545 0.896104
109 AT4 0.452632 0.884615
110 A G C C 0.451613 0.911392
111 APC G U 0.45082 0.886076
112 PRT 0.449541 0.959459
113 G U34 0.449153 0.888889
114 DG DG 0.448598 0.865854
115 ITT 0.447917 0.868421
116 BA3 0.446809 0.894737
117 C2E 0.444444 0.921053
118 PCG 0.444444 0.933333
119 35G 0.444444 0.933333
120 MGO 0.441176 0.864198
121 AN2 0.4375 0.907895
122 G C C C 0.4375 0.924051
123 M33 0.43299 0.883117
124 UCG 0.429688 0.911392
125 A G U 0.42963 0.888889
126 ACP 0.428571 0.896104
127 MGQ 0.424528 0.935897
128 AR6 0.424242 0.894737
129 7DT 0.424242 0.906667
130 APR 0.424242 0.894737
131 93A 0.42268 0.833333
132 A4P 0.420168 0.869048
133 G8D 0.42 0.875
134 AD9 0.42 0.896104
135 SAP 0.42 0.873418
136 AGS 0.42 0.873418
137 CA0 0.418367 0.896104
138 ATF 0.417476 0.884615
139 AGO 0.414634 0.888889
140 A G U U 0.414286 0.888889
141 NIA 0.413043 0.82716
142 MGV 0.412844 0.890244
143 TAT 0.411765 0.884615
144 T99 0.411765 0.884615
145 ADQ 0.411215 0.871795
146 A1R 0.411215 0.839506
147 RGT 0.410714 0.909091
148 CGP 0.409836 0.86747
149 C1Z 0.409091 0.986486
150 A 0.408602 0.893333
151 AMP 0.408602 0.893333
152 UP5 0.40678 0.873418
153 AMZ 0.406593 0.918919
154 C2R 0.406593 0.906667
155 JBT 0.405882 0.778947
156 A22 0.40566 0.907895
157 25L 0.405405 0.907895
158 ADX 0.40404 0.809524
159 8OD 0.401961 0.946667
160 50T 0.4 0.883117
161 4TC 0.4 0.851852
Similar Binding Sites (Proteins are less than 50% similar to leader)
Pocket No.: 1; Query (leader) PDB : 1OIV; Ligand: GDP; Similar sites found with APoc: 546
This union binding pocket(no: 1) in the query (biounit: 1oiv.bio1) has 21 residues
No: Leader PDB Ligand Sequence Similarity
1 1Y63 ADP None
2 5GVR LMR None
3 1ION ADP None
4 3H86 AP5 None
5 5LV1 78T None
6 5H4S RAM None
7 2ORV 4TA None
8 5ZB0 TYD None
9 5ZB0 ADP None
10 3DC4 ADP 1.04712
11 2O66 FLC 1.48148
12 5M04 GDP 1.57068
13 4H1V GNP 1.57068
14 1V8K ANP 1.57068
15 3EWA ANP 1.57068
16 4IHQ ADP 1.57068
17 6AYU F6P 1.57068
18 2HCJ GDP 2.09424
19 3U6B GDP 2.09424
20 1SVI GDP 2.09424
21 4G5G GDP 2.09424
22 5JBQ GDP 2.09424
23 1D8T GDP 2.09424
24 3U6K GDP 2.09424
25 2BVN GNP 2.09424
26 5UIV ADP 2.09424
27 2FAH GDP 2.09424
28 3FKQ ATP 2.09424
29 3TBK ANP 2.09424
30 1NN5 2DT 2.09424
31 1NN5 ANP 2.09424
32 3BER AMP 2.09424
33 1VKJ A3P 2.09424
34 5WRI A3P 2.5
35 3H4S ADP 2.6178
36 4FRZ ADP 2.6178
37 2GDJ ANP 2.6178
38 1Z6T ADP 2.6178
39 1NJF ADP 2.6178
40 4BFW ZVW 2.6178
41 3TMK T5A 2.6178
42 1NJF AGS 2.6178
43 3VM7 GLC 2.6178
44 1Z83 AP5 2.6178
45 3FYH ADP 2.6178
46 1IZC PYR 2.6178
47 1MJT ITU 2.6178
48 5WRJ A3P 2.64026
49 3IIJ ADP 2.77778
50 4R43 GDP 3.03514
51 4LPS GDP 3.14136
52 1BG2 ADP 3.14136
53 2W58 ADP 3.14136
54 6A20 ADP 3.14136
55 1SQ5 ADP 3.14136
56 1U0J ADP 3.14136
57 3DKP ADP 3.14136
58 1XKV ATP 3.14136
59 4Q1A 2XZ 3.14136
60 4Q1A UDP 3.14136
61 4NE2 SH2 3.14136
62 4NE2 ADP 3.14136
63 4ZNL BEF ADP 3.14136
64 6DEF GCP 3.14136
65 2Q2Y MKR 3.14136
66 2Q2Y ADP 3.14136
67 2ZPA ADP 3.14136
68 1OS1 ATP 3.14136
69 1OS1 PYR 3.14136
70 4NU0 AP5 3.14136
71 5E5U MLI 3.14136
72 4IDN GNP 3.14136
73 4GOX A3P 3.14136
74 2O0J ADP 3.14136
75 1SVM ATP 3.14136
76 4ZJS 4P0 3.14136
77 4TMK T5A 3.14136
78 5D63 FUC GAL GLA 3.14136
79 2ZTS ADP 3.18725
80 2C9O ADP 3.50877
81 4WOP CTP 3.55556
82 3WY9 GDP 3.66492
83 5W7Q GDP 3.66492
84 3WYA GDP 3.66492
85 2FH5 GTP 3.66492
86 2C77 GNP 3.66492
87 2C78 GNP 3.66492
88 2WHX ADP 3.66492
89 1IN4 ADP 3.66492
90 4IEE AGS 3.66492
91 2JLR ANP 3.66492
92 6AIC AMP 3.66492
93 2ZJ5 ADP 3.66492
94 5A96 GTP 3.66492
95 1WMA AB3 3.66492
96 1WMA NDP 3.66492
97 5LJW ANP 3.66492
98 2VOH CIT 3.82166
99 1G7S GDP 4.18848
100 2Y65 ADP 4.18848
101 3P4X ADP 4.18848
102 3FWY ADP 4.18848
103 1H65 GDP 4.18848
104 1IWE IMP 4.18848
105 5G41 AP5 4.18848
106 1P9B GDP 4.18848
107 4YJ1 ADP 4.18848
108 2OZE AGS 4.18848
109 1ZIN AP5 4.18848
110 3FB4 AP5 4.18848
111 4MKF AP5 4.18848
112 2BEK ATP 4.18848
113 5K5Z ANP 4.18848
114 2WZF BGC 4.18848
115 3BD9 A3P 4.18848
116 5GQI CTP 4.18848
117 1Q19 SSC 4.18848
118 4V03 ADP 4.28016
119 5YT0 GDP 4.71204
120 4B47 GDP 4.71204
121 5FG3 GDP 4.71204
122 4PC3 GDP 4.71204
123 5H7J GCP 4.71204
124 5H7K GDP 4.71204
125 4AG5 ADP 4.71204
126 3KJI ADP 4.71204
127 3BFV ADP 4.71204
128 4RZ3 ADP 4.71204
129 2D2F ADP 4.71204
130 4E03 ADP 4.71204
131 5ZBR ANP 4.71204
132 3EZ2 ADP 4.71204
133 1XP8 AGS 4.71204
134 2GK6 ADP 4.71204
135 1S3G AP5 4.71204
136 4MKG AP5 4.71204
137 4PJ3 ANP 4.71204
138 1W5T ADP 4.71204
139 6B8B ADP 4.71204
140 1W5T ANP 4.71204
141 3QVV A3P 4.71204
142 3VX3 ADP 4.83871
143 4UXH T5A 4.8913
144 4LC1 GDP 5.2356
145 1T5C ADP 5.2356
146 1WDT GTP 5.2356
147 2HF9 GSP 5.2356
148 2OG2 MLI 5.2356
149 4LYA ATP 5.2356
150 3B9Q MLI 5.2356
151 1XX6 ADP 5.2356
152 1LVK MNT BEF 5.2356
153 5J1J ANP 5.2356
154 5L3R GCP 5.2356
155 5EXT ADP 5.2356
156 1NY5 ADP 5.2356
157 1FNN ADP 5.2356
158 5H68 AGS 5.2356
159 3QXC ATP 5.2356
160 5NM7 GLY 5.2356
161 1VMK GUN 5.2356
162 3AB4 THR 5.61798
163 6FMC DUE 5.6962
164 3TK1 GDP 5.75916
165 3MD0 GDP 5.75916
166 5W76 GDP 5.75916
167 3AB3 GDP 5.75916
168 4KFU ACP 5.75916
169 1ZCB GDP 5.75916
170 2XTZ GSP 5.75916
171 5ZXD ATP 5.75916
172 2OBM ADP 5.75916
173 3CX8 GSP 5.75916
174 1R6B ADP 5.75916
175 3BOS CDP 5.75916
176 1IHU AF3 5.75916
177 2CHG ANP 5.75916
178 1IHU ADP 5.75916
179 4R2I ANP 5.75916
180 2D7D ADP 5.75916
181 4KBF AMP 5.75916
182 5M7P ADP 5.75916
183 3ZS9 ADP ALF 5.75916
184 2WOJ ADP ALF 5.75916
185 1OYY AGS 5.75916
186 2JAQ DCP 5.75916
187 2WW4 ADP 5.75916
188 2I4I AMP 5.75916
189 4QRH 0O2 5.75916
190 5WQP NCA 5.75916
191 3QF7 ANP 6
192 5MVR ADP 6.17284
193 5G3Y ADP 6.19469
194 2RCN GDP 6.28272
195 1GOJ ADP 6.28272
196 2CBZ ATP 6.28272
197 1F9V ADP 6.28272
198 1LVG ADP 6.28272
199 4CVN ADP 6.28272
200 4NCN GTP 6.28272
201 4TMZ GSP 6.28272
202 1GOT GDP 6.28272
203 3NHB ADP 6.28272
204 2OM2 GDP 6.28272
205 1GP2 GDP 6.28272
206 1Y3A GDP 6.28272
207 1FQJ GDP 6.28272
208 1FQK GDP 6.28272
209 3UIE ANP 6.28272
210 1G3Q ADP 6.28272
211 1SVK ALF GDP 6.28272
212 5WC2 ADP 6.28272
213 4HSE ADP 6.28272
214 1TAD GDP 6.28272
215 1TAD ALF 6.28272
216 5AK0 8V1 6.28272
217 1BH2 GSP 6.28272
218 1G6O ADP 6.28272
219 2OFW ADX 6.28272
220 4XGU ADP 6.28272
221 5IFS ADP 6.28272
222 4QOS ADP 6.28272
223 2QEN ADP 6.28272
224 5HR5 ADP 6.28272
225 4XVU ATP 6.28272
226 3HU3 AGS 6.28272
227 2X7I CIT 6.28272
228 2JK0 ASP 6.28272
229 1NST A3P 6.28272
230 3QKT ANP 6.28272
231 4QM7 GTP 6.43275
232 2QG6 NMN 6.53266
233 1K4M CIT 6.57277
234 1QF9 ALF 6.70103
235 1QF9 ADP 6.70103
236 1QF9 C5P 6.70103
237 2PEZ GGZ 6.70391
238 2PEZ DAT 6.70391
239 3WXM GTP 6.71141
240 2IL4 COA 6.79612
241 4DCT GDP 6.80628
242 2VVG ADP 6.80628
243 5YV5 ADP 6.80628
244 1YQT ADP 6.80628
245 3DEF GDP 6.80628
246 5L3W GDP 6.80628
247 2CDN ADP 6.80628
248 5XKT GNP 6.80628
249 5LTJ ADP 6.80628
250 5XDR ADP 6.80628
251 5LTJ BEF 6.80628
252 1K6M AGS 6.80628
253 1AKY AP5 6.80628
254 5BYK A3P 6.80628
255 5BYK OAQ 6.80628
256 1UKZ ADP 6.80628
257 4YS0 ADP 6.80628
258 6H5E ANP 6.80628
259 5LLB 6YZ 6.80628
260 1PUJ GNP 7.32984
261 1TQ4 GDP 7.32984
262 2IYL GDP 7.32984
263 5BN3 ADP 7.32984
264 1DAK ADP 7.32984
265 1DAK DPU 7.32984
266 6B4K ANP 7.32984
267 2RGX AP5 7.32984
268 1QF5 GDP 7.32984
269 1QF5 RPL 7.32984
270 5VGR GDP 7.32984
271 1NHX FTB 7.32984
272 1NHX PEP 7.32984
273 2GMV UN8 7.32984
274 2FNA ADP 7.32984
275 5TIV A3P 7.32984
276 2GMV PEP 7.32984
277 3FVQ ATP 7.32984
278 3ITJ CIT 7.32984
279 3CV2 OXL 7.32984
280 2IXE ATP 7.32984
281 2BO4 FLC 7.32984
282 2F5X ASP 7.32984
283 1D8C GLV 7.32984
284 1P7T PYR 7.32984
285 3K5I AIR 7.32984
286 3BFX A3P 7.32984
287 4P3Y GDP 7.69231
288 1ZUI SKM 7.7381
289 2DPY ADP 7.8534
290 5IRR GSP 7.8534
291 5LB3 ADP 7.8534
292 5IRN ADP 7.8534
293 1B7T ADP 7.8534
294 3DZD ADP 7.8534
295 1KK8 BEF ADP 7.8534
296 1CR1 TTP 7.8534
297 3L6C MLI 7.8534
298 4A4Z ANP 7.8534
299 2B8W ALF 5GP 7.8534
300 2ZE7 DST 7.8534
301 1F5N GNP 7.8534
302 5MEX PAP 7.8534
303 1E2K TMC 8.1571
304 2XT3 ADP 8.37696
305 5TSH ADP 8.37696
306 5U32 GDP 8.37696
307 5TSH ANP 8.37696
308 4ZKD GDP 8.37696
309 5N69 ADP 8.37696
310 3ZFD ANP 8.37696
311 2IS6 ADP 8.37696
312 2CE7 ADP 8.37696
313 4PFO ADP 8.37696
314 5FTB ANP 8.37696
315 5Y6N ADP 8.37696
316 1RJ9 GCP 8.37696
317 5VHC BEF ADP 8.37696
318 4ZDJ UTP 8.37696
319 5FHD ADP ALF 8.37696
320 5BQ5 ADP BEF 8.46561
321 6CRK GDP 8.49421
322 1KO8 6PG 8.57143
323 4OI4 ATP 8.69565
324 2VB6 ADP BEF 8.72483
325 1FP6 ADP 8.90052
326 4X8O AP5 8.90052
327 2BIF SIN 8.90052
328 2BIF ANP 8.90052
329 2QQ0 ADP 8.90052
330 2QQ0 TMP 8.90052
331 2QQ0 ANP 8.90052
332 2QQ0 THM 8.90052
333 4IOK XPO 8.90052
334 4IOK ADP 8.90052
335 1CS4 GSP 8.96226
336 2ODE ALF GDP 9.21986
337 4P4T GDP 9.42408
338 5L3V GDP 9.42408
339 5L3S GNP 9.42408
340 3Q9L ATP 9.42408
341 4ZG4 VO4 ADP 9.42408
342 5I0H ADP BEF 9.42408
343 1OE0 TTP 9.42408
344 2VWT PYR 9.42408
345 5I34 GDP 9.94764
346 4WZA ADP 9.94764
347 4WZA ACP 9.94764
348 1XMV ADP 9.94764
349 2XAU ADP 9.94764
350 2FSH ANP 9.94764
351 4TL6 ANP 9.94764
352 2QTV GNP 10.2041
353 5W75 GDP 10.4712
354 1DAR GDP 10.4712
355 6AU6 GDP 10.4712
356 4TTQ ATP 10.4712
357 1YTM ATP 10.4712
358 1VHT BA3 10.4712
359 3ZQ6 ADP ALF 10.4712
360 5W75 SUC 10.4712
361 1RRC ADP 10.9948
362 1W0J ADP 10.9948
363 1X6V ADP 10.9948
364 1W0J ADP BEF 10.9948
365 5H67 ATP 11.1702
366 1BO4 COA 11.3095
367 5J1S ATP 11.3821
368 5CK5 GDP 11.5183
369 4KVA GTP 11.5183
370 2PL3 ADP 11.5183
371 4FCW ADP 11.5183
372 4LJ9 ACP 11.5183
373 5MZN ADP 11.5183
374 5Z69 AGS 11.5183
375 1HTW ADP 12.0253
376 3VMF GTP 12.0419
377 2QN6 GDP 12.5654
378 4J0Q GDP 12.5654
379 3EC1 GDP 12.5654
380 4RD0 GDP 12.5654
381 3T34 GDP 12.5654
382 4GBM A3P 12.5654
383 1YRB GDP 13.089
384 1M7G AV2 13.089
385 4PPF FLC 13.089
386 3IO3 ADP 13.089
387 2ZR9 DTP 13.089
388 1M7G ADP 13.089
389 1M7G ADX 13.089
390 4XTR ADP 13.5135
391 4XTR ATP 13.5135
392 4HI0 GDP 13.6126
393 1W7J ADP BEF 13.9073
394 1D2E GDP 14.1361
395 1G7C 5GP 14.1361
396 3IUY AMP 14.1361
397 4YDS ATP 14.6597
398 1APZ ASP 14.8148
399 4PX9 ADP 15.1832
400 6FAA ADP 15.1832
401 3RC3 ANP 15.1832
402 6G14 G4P 15.7068
403 5GOE GDP 15.7068
404 1G41 ADP 15.7068
405 2QZ4 ADP 15.7068
406 3B7G ANP 15.7068
407 1OFH ADP 15.7068
408 3ZIA ADP 15.873
409 3ZIA ATP 15.873
410 1QHH ATP 15.9763
411 1SKQ GDP 16.2304
412 3LRE ADP 16.2304
413 1W4R TTP 16.2304
414 1GXU 2HP 16.4835
415 2AWN ADP 16.7539
416 2F3R G5P 16.7539
417 2KIN ADP 17
418 3PQC GDP 17.2775
419 2NCD ADP 17.2775
420 2GKS ADP 17.2775
421 4OHY ANP 17.2775
422 2YOH WMJ 17.801
423 1P72 ADP 18.3246
424 2PZE ATP 18.8482
425 4JLV ADP 18.8482
426 1UJ2 C5P 18.8482
427 1UJ2 ADP 18.8482
428 4BQS ADP 19.3182
429 4BQS K2Q 19.3182
430 3CNL GNP 19.3717
431 3E70 GDP 19.3717
432 1R0X ATP 19.3717
433 1F2U ATP 20.2703
434 1KK1 GNP 20.4188
435 3A4M ADP 20.4188
436 1UPT GTP 20.4678
437 5EE5 GTP 20.4678
438 4WZ6 ATP 20.9424
439 2J5V PCA 20.9424
440 2V7Q ATP 22
441 2V7Q ADP 22
442 2CK3 ANP 22
443 2CK3 ADP 22
444 3RLF ANP 22.5131
445 1JJV ATP 23.5602
446 4D81 ADP 23.5602
447 5HCN GCP 24.0838
448 1WF3 GNP 25.1309
449 4BAS GNP 26.1307
450 4M9Q GNP 26.178
451 5KUT GDP 28.0423
452 3DOE GTP 28.7958
453 2XTN GTP 28.7958
454 3AQ4 GDP 29.3478
455 1KSH GDP 29.5699
456 1MR3 G3D 29.8343
457 4ZI2 GNP 30
458 4GOJ GNP 30.1587
459 4V0K GDP 30.1775
460 5DI3 GNP 30.2703
461 6C90 ADP 30.7692
462 3T1O GDP 30.8901
463 3T12 GDP ALF 30.8901
464 1XEX ATP 31.3953
465 2A5F GTP 31.4286
466 1FZQ GDP 31.4917
467 4KAX GTP 31.9527
468 3KTA AP5 32.3699
469 2NGR GDP 32.4607
470 1GRN GDP 32.4607
471 4ITR GDP 32.4607
472 2J59 GTP 32.5301
473 2WMO GTP 32.6316
474 2W83 GTP 32.7273
475 5UPK GNP 32.973
476 5KSZ GCP 32.9843
477 5KSP GDP 33.1579
478 3PCR GTP 33.3333
479 2GJ8 ALF GDP 33.7209
480 5KDO GDP 33.7838
481 3N5C GDP 33.9506
482 4YC7 GNP 34.2541
483 2X77 GDP 34.3915
484 4DID GDP 35.2332
485 6CS8 F9Y 38.2199
486 2ZEJ GDP 38.587
487 1MKY GDP 40.3141
488 1NF3 GNP 40.3141
489 4YLG GDP 41.6185
490 1DS6 GDP 41.8848
491 3GJX GTP 42.4084
492 3REF GDP 42.4084
493 1E96 GTP 42.4084
494 1I4D GDP 42.9319
495 3GJ4 GDP 42.9319
496 3GJ0 GDP 42.9319
497 3GJ7 GDP 42.9319
498 3GJ3 GDP 42.9319
499 5BXQ GDP 42.9319
500 3GJ8 GDP 42.9319
501 3GJ5 GDP 42.9319
502 3CH5 GDP 42.9319
503 1IBR GNP 42.9319
504 3M1I GTP 42.9319
505 4HAT GNP 42.9319
506 3WYF GTP 42.9319
507 2W2X GSP 43.2432
508 1OW3 GDP 43.4555
509 5JCP GDP ALF 43.4555
510 2GCO GNP 44.5026
511 5IRC GDP 44.6237
512 3T5G GDP 44.7514
513 5HPY GDP 44.8649
514 2CJW GDP 45.0262
515 2J0V GDP 45.0262
516 3WYG GTP 45.0549
517 1G4U GDP 45.1087
518 4D0N GDP 45.4054
519 3LXR GDP 45.4054
520 6BCA GSP 45.4054
521 6BCB GSP 45.4054
522 6BC0 GSP 45.4054
523 5DIF GNP 45.5497
524 5UWJ GNP 45.5497
525 5UWW GNP 45.5497
526 6CIT GNP 45.5497
527 5UWI GNP 45.5497
528 5UWU GNP 45.5497
529 5UWQ GNP 45.5497
530 5UWO GNP 45.5497
531 5UWR GNP 45.5497
532 5DHF GNP 45.5497
533 5UWT GNP 45.5497
534 5UWH GNP 45.5497
535 5UWP GNP 45.5497
536 5DI9 GNP 45.5497
537 5UWS GNP 45.5497
538 4XOI GTP 45.5556
539 2FJU GSP 46.0674
540 1CXZ GSP 46.1538
541 4XSH GSP 46.3687
542 1HE1 GDP 46.5909
543 1TX4 ALF GDP 46.8927
544 2A9K GDP 49.1979
545 5TB5 GDP 49.7297
546 5TAR GDP 49.7297
Pocket No.: 2; Query (leader) PDB : 1OIV; Ligand: GDP; Similar sites found with APoc: 29
This union binding pocket(no: 2) in the query (biounit: 1oiv.bio1) has 26 residues
No: Leader PDB Ligand Sequence Similarity
1 3KC1 2T6 None
2 5NLD LBT None
3 2DT9 THR 1.57068
4 3S6X SIA GAL BGC 2.09424
5 3OEN GLU 2.6178
6 6AR9 3L4 2.6178
7 2OWZ CIT 3.66492
8 1DQN IMU 3.66492
9 1T8U UAP SGN IDS SGN 3.66492
10 4Y4V DAL 4.18848
11 4B5W PYR 5.2356
12 6C0B PAM 5.2356
13 3FIU POP 5.75916
14 1FQK ALF 6.28272
15 1FQJ ALF 6.28272
16 2VHJ ADP 6.28272
17 4RYV ZEA 7.09677
18 4UOX PLP 7.32984
19 1U1J MET 7.8534
20 1TKU 5RP 7.8534
21 3L8H FX1 8.37989
22 5X2N ALA 8.90052
23 2XCU C5P 10.9948
24 4QDI ATP 11.5183
25 2F6U CIT 16.7539
26 2NGR AF3 32.4607
27 1GRN AF3 32.4607
28 1G4U AF3 45.1087
29 1HE1 AF3 46.5909
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