Receptor
PDB id Resolution Class Description Source Keywords
1OGD 1.95 Å NON-ENZYME: TRANSPORT THE STRUCTURE OF BACILLUS SUBTILIS RBSD COMPLEXED WITH D-RIBOSE BACILLUS SUBTILIS RIBOSE TRANSPORT SUGAR TRANSPORT
Ref.: CRYSTAL STRUCTURES OF RBSD LEADING TO THE IDENTIFICATION OF CYTOPLASMIC SUGAR-BINDING PROTEINS WITH A NOVEL FOLDING ARCHITECTURE J.BIOL.CHEM. V. 278 28173 2003
Ligand
Ligand Chain:Residue Validity Ligand Warnings Binding Data NGL Viewer Molecular Weight (Da) Formula SMILES
CL A:1132;
D:1133;
Invalid;
Invalid;
none;
none;
submit data
35.453 Cl [Cl-]
RIP A:1134;
B:1132;
C:1132;
D:1132;
E:1132;
Valid;
Valid;
Valid;
Valid;
Valid;
none;
none;
none;
none;
none;
Kd = 0.93 mM
150.13 C5 H10 O5 C1[C@...
View in 3D viewer
90% Homology Family
Leader
PDB id Resolution Class Description Source Keywords
1OGD 1.95 Å NON-ENZYME: TRANSPORT THE STRUCTURE OF BACILLUS SUBTILIS RBSD COMPLEXED WITH D-RIBOSE BACILLUS SUBTILIS RIBOSE TRANSPORT SUGAR TRANSPORT
Ref.: CRYSTAL STRUCTURES OF RBSD LEADING TO THE IDENTIFICATION OF CYTOPLASMIC SUGAR-BINDING PROTEINS WITH A NOVEL FOLDING ARCHITECTURE J.BIOL.CHEM. V. 278 28173 2003
Members (2)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 199 families.
1 1OGE - RP5 C5 H11 O8 P C([C@@H]1[....
2 1OGD Kd = 0.93 mM RIP C5 H10 O5 C1[C@H]([C....
70% Homology Family (2)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 166 families.
1 1OGE - RP5 C5 H11 O8 P C([C@@H]1[....
2 1OGD Kd = 0.93 mM RIP C5 H10 O5 C1[C@H]([C....
50% Homology Family (3)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 141 families.
1 3P13 - RIP C5 H10 O5 C1[C@H]([C....
2 1OGE - RP5 C5 H11 O8 P C([C@@H]1[....
3 1OGD Kd = 0.93 mM RIP C5 H10 O5 C1[C@H]([C....
Polypharmacology
Similar Ligands
Ligand no: 1; Ligand: RIP; Similar ligands found: 14
No: Ligand ECFP6 Tc MDL keys Tc
1 XYP 1 1
2 0MK 1 1
3 RIP 1 1
4 LXC 1 1
5 ARA 1 1
6 ARB 1 1
7 XYS 1 1
8 HSY 1 1
9 BXP 0.414634 0.84375
10 XYP XYP 0.414634 0.84375
11 XYS XYP 0.414634 0.84375
12 XYS XYS 0.414634 0.84375
13 XYP XYS 0.414634 0.84375
14 FU4 0.4 0.896552
Similar Binding Sites (Proteins are less than 50% similar to leader)
Pocket No.: 1; Query (leader) PDB : 1OGD; Ligand: RIP; Similar sites found: 701
This union binding pocket(no: 1) in the query (biounit: 1ogd.bio1) has 14 residues
No: Leader PDB Ligand P-value (APoc) PS_Score (APoc) Sequence Similarity
1 1UO5 PIH 0.00004561 0.55499 None
2 3TKA CTN 0.0001972 0.53539 None
3 3F81 STT 0.0001217 0.50632 None
4 4INB 1F6 0.000144 0.47972 None
5 2VAR ANP 0.0002712 0.47043 None
6 3FXU TSU 0.000476 0.46594 None
7 1Q0H FOM 0.002052 0.46354 None
8 1Q0H NDP 0.002249 0.46354 None
9 1TU3 GNP 0.0006372 0.46229 None
10 1XE7 GUN 0.001046 0.46191 None
11 2IUW AKG 0.0001422 0.46087 None
12 4KCF AKM 0.0006608 0.45807 None
13 3PXP MYR 0.0004336 0.45532 None
14 2A0W DIH 0.001728 0.45443 None
15 1UXG NAD 0.002537 0.45228 None
16 1UXG FUM 0.002537 0.45228 None
17 3CBG SAH 0.0006146 0.4491 None
18 2VAR AMP 0.0003604 0.44802 None
19 2B4Q NAP 0.001932 0.44765 None
20 3NCQ ATP 0.00104 0.44599 None
21 1UO4 PIH 0.003601 0.44532 None
22 4CO3 ATP 0.004808 0.44427 None
23 2O66 FLC 0.0005213 0.44227 None
24 3M0J OAF 0.002798 0.44198 None
25 3RO7 TDR 0.00226 0.44181 None
26 1VQ2 DDN 0.0009855 0.44068 None
27 1MQ0 BRD 0.00079 0.43982 None
28 2ALG HP6 0.001534 0.43892 None
29 2ALG DAO 0.001534 0.43892 None
30 1BGQ RDC 0.002443 0.43885 None
31 3BY8 MLT 0.001474 0.43801 None
32 1X1T NAD 0.01592 0.43747 None
33 2VAR KDG 0.0008091 0.4368 None
34 1PVS 7HP 0.001158 0.43645 None
35 2C4I BTN 0.001103 0.43638 None
36 1NF8 ISC 0.0008463 0.43602 None
37 4P3H 25G 0.008086 0.4353 None
38 2VAR KDF 0.0009821 0.43342 None
39 3TA2 AKG 0.003946 0.43275 None
40 2FR6 CTN 0.00001101 0.43251 None
41 2OFE NAG 0.001415 0.43146 None
42 1M5B BN1 0.01509 0.43119 None
43 2F01 BTQ 0.0191 0.43076 None
44 2F01 BTN 0.0191 0.43076 None
45 1Y2W NAG 0.001505 0.43033 None
46 1C3M MAN MAN 0.001371 0.43014 None
47 3ZZS TRP 0.007243 0.42857 None
48 4F4S EFO 0.0008909 0.42634 None
49 3K56 IS3 0.001729 0.42605 None
50 2UZ2 BTN 0.002005 0.42579 None
51 1M1B SPV 0.0005598 0.42508 None
52 1FMB HYB 0.001702 0.42384 None
53 1PTR PRB 0.0002027 0.42335 None
54 1SBZ FMN 0.008157 0.42281 None
55 2Q37 3AL 0.001579 0.4228 None
56 3R35 4CO 0.007677 0.42275 None
57 2VJJ RAM GLC GAL NAG NAG GLC 0.01852 0.42233 None
58 2J73 GLC GLC GLC 0.02052 0.42142 None
59 4U36 TNR 0.00592 0.41929 None
60 3BIB PSF 0.007101 0.41904 None
61 4EXO PYR 0.006476 0.41668 None
62 1POC GEL 0.00381 0.41654 None
63 4AAW R84 0.02387 0.41604 None
64 4M6T SAM 0.01615 0.41604 None
65 3TA2 ATP 0.0139 0.41429 None
66 2W3L DRO 0.01078 0.41363 None
67 3W8S GSH 0.002727 0.41319 None
68 4KCF FMN 0.004147 0.4129 None
69 1TUV VK3 0.01142 0.41243 None
70 2FMD MAN MAN 0.006065 0.41208 None
71 1R6W 164 0.004443 0.41168 None
72 3D3W NAP 0.01414 0.41107 None
73 4LBP 1WG 0.01267 0.41068 None
74 3RF4 FUN 0.002312 0.41017 None
75 2J73 GLC GLC GLC GLC 0.0258 0.40941 None
76 1YFZ IMP 0.001885 0.40791 None
77 1DUC DUD 0.008381 0.40711 None
78 3S2Y FMN 0.007364 0.40671 None
79 1FW1 GSH 0.0002986 0.40573 None
80 3T2W BTN 0.004756 0.40341 None
81 3QP6 HL6 0.006511 0.40272 None
82 1PR9 NAP 0.02502 0.40236 None
83 2V7T SAH 0.006002 0.46553 1.52672
84 1G6O ADP 0.01156 0.43526 1.52672
85 3WCS MAN NAG 0.0005489 0.43454 1.52672
86 3WCS MAN NAG GAL 0.000989 0.43057 1.52672
87 1YOA FMN 0.01508 0.42277 1.52672
88 1X92 M7P 0.00228 0.41874 1.52672
89 1Y52 BTN 0.009728 0.42891 1.5873
90 3W54 RNB 0.0001495 0.46908 2.29008
91 3BAZ NAP 0.0005247 0.4659 2.29008
92 2OZE AGS 0.0003695 0.46049 2.29008
93 1P9P SAH 0.0009543 0.44947 2.29008
94 4NTD FAD 0.002982 0.44912 2.29008
95 5YAS FAC 0.0004236 0.44523 2.29008
96 1YOE RIB 0.0003918 0.44352 2.29008
97 4BAS GNP 0.001315 0.44172 2.29008
98 2DTX BMA 0.004604 0.44168 2.29008
99 2R42 FPS 0.001584 0.43638 2.29008
100 2H8Z FMN 0.003487 0.43509 2.29008
101 2H8Z 8CM 0.003487 0.43509 2.29008
102 2XK9 XK9 0.005595 0.43242 2.29008
103 1UBY DMA 0.001851 0.42943 2.29008
104 4TMK T5A 0.005773 0.42943 2.29008
105 4F8L GAL 0.01166 0.42866 2.29008
106 3FC2 IBI 0.00558 0.42754 2.29008
107 4U9W COA 0.002584 0.42656 2.29008
108 1F8F NAD 0.0182 0.42596 2.29008
109 3UEC ALA ARG TPO LYS 0.003227 0.42312 2.29008
110 1WVG CXY 0.00454 0.42092 2.29008
111 4PO2 ASN ARG LEU LEU LEU THR GLY 0.004692 0.42031 2.29008
112 3BHO B4P 0.01297 0.41748 2.29008
113 3RFV NAI 0.01009 0.41366 2.29008
114 1UAY ADN 0.00419 0.41048 2.29008
115 2D37 NAD 0.01206 0.4103 2.29008
116 2D4N DUP 0.01153 0.40617 2.29008
117 1L1Q 9DA 0.008937 0.40505 2.29008
118 3RFV 15L 0.01688 0.40262 2.29008
119 1P72 ADP 0.02205 0.40256 2.29008
120 1Y9Q MED 0.007626 0.40069 2.29008
121 3FKQ ATP 0.009369 0.40044 2.29008
122 4M5P MLA 0.001074 0.47154 3.05344
123 2AMV BIN 0.002443 0.46363 3.05344
124 4JCA CIT 0.001837 0.4599 3.05344
125 3LM9 FRU 0.0007041 0.4587 3.05344
126 4WNB 4BN 0.0005486 0.45113 3.05344
127 3DCM SAM 0.0007373 0.45021 3.05344
128 1HEX NAD 0.002701 0.43847 3.05344
129 2DKH FAD 0.004424 0.43575 3.05344
130 4B8V NDG NAG NAG NAG 0.003692 0.43113 3.05344
131 2DKH 3HB 0.009564 0.42732 3.05344
132 4UAL 3FV 0.00232 0.4254 3.05344
133 3VHZ L2P GLC MAN SGA 0.03494 0.41895 3.05344
134 1A8R GTP 0.004379 0.41799 3.05344
135 3VHZ SOG 0.03295 0.41756 3.05344
136 4AP9 1PS 0.004821 0.41624 3.05344
137 3LEO GSH 0.009502 0.41614 3.05344
138 1HQL GLA MBG 0.0007023 0.40992 3.05344
139 5FIT AP2 0.005029 0.40493 3.05344
140 4KFU ACP 0.0161 0.40079 3.05344
141 1JA9 NDP 0.002051 0.47914 3.81679
142 1D6H COA 0.001104 0.47391 3.81679
143 3ZY6 GFB 0.0002794 0.46989 3.81679
144 2YC5 6BC 0.0009945 0.46696 3.81679
145 2GDZ NAD 0.001399 0.45377 3.81679
146 1C3V NDP 0.001699 0.45147 3.81679
147 1XX4 BAM 0.001885 0.44973 3.81679
148 1C1L GAL BGC 0.001377 0.43929 3.81679
149 1R37 NAD 0.004503 0.43661 3.81679
150 2XVE FAD 0.01419 0.43509 3.81679
151 1T0I FMN 0.001753 0.43252 3.81679
152 1X54 4AD 0.003243 0.43045 3.81679
153 1XNK XS2 0.001655 0.42918 3.81679
154 1T57 FMN 0.002923 0.42898 3.81679
155 1Z34 2FD 0.01517 0.42751 3.81679
156 3GEG NAD 0.005576 0.42484 3.81679
157 2H6B 3C4 0.02044 0.42358 3.81679
158 3WD1 ST7 0.014 0.42348 3.81679
159 1YAG ATP 0.005435 0.41928 3.81679
160 1LTH NAD 0.02649 0.41687 3.81679
161 3ZTV ADN 0.003187 0.41529 3.81679
162 4W6Z 8ID 0.01595 0.41429 3.81679
163 4RNX FMN 0.005769 0.4139 3.81679
164 3TO7 COA 0.01901 0.41284 3.81679
165 1C3V PDC 0.00156 0.4116 3.81679
166 2CSN CKI 0.0106 0.40996 3.81679
167 1I36 NAP 0.009426 0.40912 3.81679
168 1IM8 SAI 0.008224 0.40833 3.81679
169 4DHL 0K7 0.01011 0.40825 3.81679
170 4UOH ADP 0.003421 0.40641 3.81679
171 1H8G CHT 0.008027 0.4372 4.21053
172 3SJ0 DXC 0.0007975 0.44966 4.22535
173 2Q8H TF4 0.0003797 0.48283 4.58015
174 1SOW NAD 0.0005336 0.47492 4.58015
175 3BW2 FMN 0.0005845 0.47029 4.58015
176 2XDQ MGX 0.0008639 0.46585 4.58015
177 4IOK ADP 0.0008466 0.45866 4.58015
178 1DXY NAD 0.0009994 0.45556 4.58015
179 1HDR NAD 0.003703 0.45441 4.58015
180 2VBQ BSJ 0.001789 0.45438 4.58015
181 2ZJ3 G6P 0.0006431 0.45268 4.58015
182 1TOI HCI 0.001418 0.45206 4.58015
183 4NE2 SH2 0.002287 0.45087 4.58015
184 4NE2 ADP 0.002013 0.45087 4.58015
185 2YVF FAD 0.007027 0.44896 4.58015
186 2XD9 XD9 0.02512 0.44817 4.58015
187 1SC3 MLI 0.001395 0.44708 4.58015
188 1RYD NDP 0.003362 0.44569 4.58015
189 3QVL 5HY 0.006336 0.44522 4.58015
190 2Q8M AMP 0.0005578 0.44328 4.58015
191 1I7L ATP 0.001534 0.44258 4.58015
192 3O7B SAH 0.001125 0.4405 4.58015
193 4OE4 NAD 0.003205 0.43873 4.58015
194 2QJN KDG 0.0009282 0.43699 4.58015
195 4IOK XPO 0.002426 0.43414 4.58015
196 2YYJ 4HP 0.02275 0.43407 4.58015
197 2YYJ FAD 0.02275 0.43407 4.58015
198 3HF3 FMN 0.002443 0.43227 4.58015
199 1DSS NAD 0.003263 0.43191 4.58015
200 1VR0 3SL 0.0008565 0.43013 4.58015
201 4AF0 MOA 0.003523 0.42891 4.58015
202 2BGM NAJ 0.01783 0.42775 4.58015
203 1SQ5 PAU 0.0008216 0.42771 4.58015
204 1OWB NAD 0.005922 0.42706 4.58015
205 1V9N NDP 0.006611 0.42684 4.58015
206 3O2K QRP 0.0003116 0.42445 4.58015
207 2HGS ADP 0.003945 0.42349 4.58015
208 4DA6 GA2 0.02405 0.42024 4.58015
209 1NNS ASP 0.0003566 0.42005 4.58015
210 3H86 AP5 0.01881 0.41967 4.58015
211 1RYD GLC 0.0005322 0.4193 4.58015
212 1FP2 SAH 0.00254 0.41929 4.58015
213 1FP2 HMO 0.002961 0.41888 4.58015
214 3O03 NAP 0.007313 0.41834 4.58015
215 4KQI NIO 0.009689 0.4183 4.58015
216 4KQI RBZ 0.009689 0.4183 4.58015
217 2WR8 SAH 0.01302 0.4172 4.58015
218 2HGS GSH 0.002876 0.4171 4.58015
219 4AF0 IMP 0.02349 0.41636 4.58015
220 2IZ1 ATR 0.003638 0.41422 4.58015
221 3ZRR PXG 0.005867 0.41269 4.58015
222 1UKW FAD 0.01873 0.41215 4.58015
223 2Q8M FBP 0.004408 0.41182 4.58015
224 4G86 BNT 0.01106 0.4118 4.58015
225 2YIV NBN 0.0004074 0.41169 4.58015
226 2OWZ F6P 0.006524 0.40692 4.58015
227 1OLS TDP 0.03371 0.40669 4.58015
228 3PNA CMP 0.003683 0.40514 4.58015
229 2EWM NAD 0.01994 0.40448 4.58015
230 3PJU C2E 0.01556 0.40416 4.58015
231 3U1T MLI 0.0007523 0.40403 4.58015
232 1JSH SIA GAL 0.01175 0.40345 4.58015
233 4W97 UCA 0.01434 0.40285 4.58015
234 4C2G ALA ALA ALA ALA 0.00437 0.40221 4.58015
235 1NU4 MLA 0.01796 0.41039 5.15464
236 3CQD ATP 0.0002422 0.49684 5.34351
237 2GSD NAD 0.0003582 0.48667 5.34351
238 3GE7 AFQ 0.0003311 0.48546 5.34351
239 2ZWS PLM 0.002041 0.46845 5.34351
240 2H6T IVA VAL VAL STA ALA STA 0.0002395 0.46591 5.34351
241 4LSJ LSJ 0.0004738 0.46029 5.34351
242 2P8O BVA 0.0004908 0.45311 5.34351
243 1R18 SAH 0.0007831 0.45309 5.34351
244 3WE0 FAD 0.003771 0.44956 5.34351
245 1ML4 PAL 0.0008422 0.44883 5.34351
246 3I6B KDO 0.0002376 0.44873 5.34351
247 1I9G SAM 0.004985 0.44584 5.34351
248 2HW1 ANP 0.001085 0.44522 5.34351
249 4O1M NAD 0.00267 0.44152 5.34351
250 2JE7 XMM 0.002183 0.44095 5.34351
251 4NAT 2W5 0.004302 0.44089 5.34351
252 3V1V GST 0.000984 0.4407 5.34351
253 1OIK C26 0.0009621 0.43879 5.34351
254 1A59 COA 0.001265 0.43839 5.34351
255 1PFK ADP 0.001019 0.43778 5.34351
256 1NXJ TLA 0.001293 0.4347 5.34351
257 2DVZ GLU 0.000951 0.43125 5.34351
258 2QIA U20 0.01362 0.43082 5.34351
259 3CXO 3LR 0.004594 0.42988 5.34351
260 1DLJ UGA 0.01324 0.42951 5.34351
261 3T1A 5MA 0.002323 0.42746 5.34351
262 1YBH FAD 0.009688 0.42707 5.34351
263 4NAT ADP 0.03207 0.42671 5.34351
264 2G86 UMP 0.01584 0.42511 5.34351
265 1YBH P22 0.001357 0.42511 5.34351
266 1X8X TYR 0.001422 0.4243 5.34351
267 3N5O GSH 0.002899 0.42348 5.34351
268 1ECC PCP 0.004409 0.42313 5.34351
269 3K37 BCZ 0.03741 0.42243 5.34351
270 4JWX 1N4 0.001235 0.4208 5.34351
271 2J07 FAD 0.02008 0.4203 5.34351
272 2J07 HDF 0.02008 0.4203 5.34351
273 2NVK NAP 0.001347 0.41933 5.34351
274 1YBH CIE 0.01551 0.41781 5.34351
275 2P1M IHP 0.007229 0.4171 5.34351
276 2TOH HBI 0.006931 0.41637 5.34351
277 1MDZ DCS 0.01331 0.41456 5.34351
278 1DLJ NAI 0.02766 0.41454 5.34351
279 3UIE ANP 0.002576 0.41402 5.34351
280 3OZG SSI 0.003932 0.41384 5.34351
281 1JCM 137 0.01107 0.41325 5.34351
282 1D3V ABH 0.0102 0.41068 5.34351
283 1II5 GLU 0.001529 0.41007 5.34351
284 3L6R MLI 0.0005761 0.40994 5.34351
285 3ZLM ANP 0.006239 0.40969 5.34351
286 2HW1 FRU 0.001591 0.40956 5.34351
287 3MMR ABH 0.04458 0.40749 5.34351
288 4GLJ RHB 0.01914 0.40643 5.34351
289 1MDZ PLP 0.01945 0.40612 5.34351
290 2P1O NLA 0.0173 0.40602 5.34351
291 2P1O IHP 0.0173 0.40602 5.34351
292 3CXO 1N5 0.01885 0.40556 5.34351
293 1Q6O LG6 0.006796 0.40413 5.34351
294 2OI2 DP6 0.005427 0.4036 5.34351
295 3IO3 ADP 0.008795 0.40351 5.34351
296 1UCN ADP 0.006924 0.40163 5.34351
297 2AEB ABH 0.02757 0.40101 5.34351
298 1RRC ADP 0.01364 0.40071 5.34351
299 1XX6 ADP 0.005711 0.40024 5.34351
300 2YLD CMO 0.005699 0.40602 5.51181
301 2VKL MLT 0.02834 0.4004 5.55556
302 4ME6 ADP 0.0001088 0.45276 5.69948
303 2GJ3 FAD 0.003343 0.43793 5.83333
304 2YBQ UP2 0.0003576 0.488 6.10687
305 3LZW NAP 0.00167 0.47702 6.10687
306 2G36 TRP 0.00008758 0.45775 6.10687
307 1LYX PGA 0.000318 0.45581 6.10687
308 3Q9T FAY 0.002429 0.45313 6.10687
309 3MCT SAH 0.0007392 0.4522 6.10687
310 1Q11 TYE 0.0001969 0.45192 6.10687
311 3LZW FAD 0.003028 0.44882 6.10687
312 1RBO CAP 0.02701 0.44363 6.10687
313 3MAG 3MA 0.004096 0.44253 6.10687
314 3UR0 SVR 0.006476 0.43973 6.10687
315 1H9G COA MYR 0.00235 0.43958 6.10687
316 2QA1 FAD 0.004351 0.43844 6.10687
317 3P0K FAD 0.001956 0.43633 6.10687
318 1YGC 905 0.001811 0.43396 6.10687
319 3MB5 SAM 0.01147 0.43241 6.10687
320 3SCH TB6 0.0002874 0.42947 6.10687
321 2YBQ SAH 0.002335 0.42937 6.10687
322 3SSO SAH 0.002708 0.42858 6.10687
323 3ZOD FMN 0.004411 0.4278 6.10687
324 3ZOD HQE 0.004411 0.4278 6.10687
325 4Q3R XA2 0.004521 0.42584 6.10687
326 3QDY CBS 0.002848 0.42549 6.10687
327 3B96 MYA 0.003531 0.42188 6.10687
328 1Y7P RIP 0.002784 0.41911 6.10687
329 2IMP NAI 0.0466 0.41769 6.10687
330 2OHV NHL 0.001988 0.41571 6.10687
331 4LNL 2BO 0.00355 0.41566 6.10687
332 4LNL 2BK 0.00355 0.41566 6.10687
333 1A69 FMB 0.03616 0.41562 6.10687
334 1T8U UAP SGN IDS SGN 0.01672 0.41537 6.10687
335 4LWA Q13 0.01833 0.41451 6.10687
336 1T8U A3P 0.005989 0.41231 6.10687
337 2FUE M1P 0.0007297 0.41212 6.10687
338 2CKM AA7 0.02273 0.41207 6.10687
339 4G28 0W8 0.002774 0.41 6.10687
340 3OIG NAD 0.04774 0.40858 6.10687
341 4LNL PLG 0.004827 0.40799 6.10687
342 3OIG IMJ 0.02037 0.40635 6.10687
343 1DKU AP2 0.01541 0.40501 6.10687
344 4I71 AGV 0.008161 0.40485 6.10687
345 3QDT A2G GAL 0.01187 0.40465 6.10687
346 3UST FAD 0.006988 0.40364 6.10687
347 1ULE GLA GAL NAG 0.01317 0.40258 6.10687
348 1PKK DCP 0.0125 0.40231 6.10687
349 3QDW NDG 0.001036 0.40068 6.10687
350 3QDY A2G GAL 0.01455 0.4006 6.10687
351 1P9B IMO 0.0001813 0.48379 6.87023
352 3R51 MMA 0.0006905 0.47048 6.87023
353 2YFT DQR 0.0001901 0.46751 6.87023
354 3DDC GNP 0.0005272 0.46581 6.87023
355 1V35 NAI 0.001545 0.46521 6.87023
356 2AE2 PTO 0.002087 0.45825 6.87023
357 2AE2 NAP 0.002087 0.45825 6.87023
358 4FR3 0V4 0.007205 0.45353 6.87023
359 1TB4 PEJ 0.00216 0.44553 6.87023
360 2V6O FAD 0.01295 0.44294 6.87023
361 3AHC TPP 0.002497 0.44279 6.87023
362 3Q3C NAD 0.008488 0.44006 6.87023
363 4K5S PM0 0.008803 0.43697 6.87023
364 2P41 SAH 0.001405 0.43651 6.87023
365 4FDV 0UK 0.004015 0.43638 6.87023
366 4USQ FAD 0.005403 0.4331 6.87023
367 1FBL HTA 0.0008613 0.43296 6.87023
368 4FR3 LYS ARG ARG LYS SEP VAL 0.01995 0.43216 6.87023
369 2WQP WQP 0.003536 0.43194 6.87023
370 2BNF UTP 0.007634 0.43074 6.87023
371 1RYI GOA 0.01116 0.42799 6.87023
372 2JAR UMP 0.002582 0.42556 6.87023
373 3A2Q ACA ACA 0.002589 0.42344 6.87023
374 4WX0 HXD 0.002305 0.42331 6.87023
375 4K5S FAD 0.008538 0.42312 6.87023
376 1QJC PNS 0.02043 0.42254 6.87023
377 1O68 KIV 0.001465 0.41791 6.87023
378 1QF5 GDP 0.02245 0.41727 6.87023
379 1QF5 RPL 0.02245 0.41727 6.87023
380 1RYI FAD 0.01782 0.4169 6.87023
381 3DAG FEG 0.007334 0.41683 6.87023
382 2Y7P SAL 0.002076 0.41199 6.87023
383 4N7C AEF 0.006137 0.4109 6.87023
384 2HVW DCP 0.004166 0.41058 6.87023
385 1RZM E4P 0.006393 0.41013 6.87023
386 4HZX G39 0.02581 0.40774 6.87023
387 1FS5 TLA 0.01343 0.4076 6.87023
388 2NW9 FT6 0.001769 0.40741 6.87023
389 1P9B GDP 0.006425 0.4072 6.87023
390 1OFH ADP 0.01278 0.40645 6.87023
391 3V1U NAD 0.01344 0.40551 6.87023
392 3CEV ARG 0.004435 0.40196 6.87023
393 1XVV CCQ 0.0009536 0.47251 7.63359
394 4DQ2 BTX 0.0006396 0.46707 7.63359
395 2R40 20E 0.0004713 0.46613 7.63359
396 2NX1 RP5 0.0008864 0.45939 7.63359
397 2NX1 PEP 0.001019 0.45676 7.63359
398 3K3K A8S 0.0006172 0.45342 7.63359
399 2FWP ICR 0.002311 0.45067 7.63359
400 1O9U ADZ 0.002038 0.44811 7.63359
401 4N02 FNR 0.006296 0.44612 7.63359
402 2FWP CIT 0.002379 0.44506 7.63359
403 4C25 13P 0.002157 0.44415 7.63359
404 1WRA PC 0.001198 0.44193 7.63359
405 3VPD ANP 0.001329 0.44153 7.63359
406 1ZFJ IMP 0.00622 0.43962 7.63359
407 2R40 EPH 0.003156 0.43902 7.63359
408 2RDT FMN 0.01027 0.43766 7.63359
409 2JFV FLC 0.001029 0.43728 7.63359
410 3LTW HLZ 0.001077 0.43644 7.63359
411 1J5P NAD 0.003086 0.43596 7.63359
412 1NVU GTP 0.01158 0.43521 7.63359
413 2NLI LAC 0.01032 0.43455 7.63359
414 2NLI FMN 0.01032 0.43455 7.63359
415 4PLG NAI 0.007531 0.42997 7.63359
416 4PLG OXM 0.007531 0.42997 7.63359
417 2E2R 2OH 0.006895 0.42839 7.63359
418 3FED BIX 0.00202 0.42787 7.63359
419 1U7Z PMT 0.006747 0.42765 7.63359
420 3FPZ AHZ 0.03256 0.42541 7.63359
421 1NML CIT 0.001025 0.42395 7.63359
422 1KYV RBF 0.002733 0.42247 7.63359
423 2RDT 2RD 0.03138 0.42093 7.63359
424 2Q2V NAD 0.01007 0.41995 7.63359
425 3M6W SAM 0.002963 0.41886 7.63359
426 5T0A A3P 0.002337 0.41702 7.63359
427 2XCG XCG 0.011 0.41464 7.63359
428 1E7S NAP 0.0134 0.41328 7.63359
429 4NM5 ADP 0.006998 0.41298 7.63359
430 1OMZ UD2 0.02661 0.41064 7.63359
431 1IZC PYR 0.01028 0.40592 7.63359
432 2GWD GLU 0.001947 0.40551 7.63359
433 4R33 TRP 0.02269 0.40426 7.63359
434 4R33 SAH 0.02269 0.40426 7.63359
435 2B82 ADN 0.01068 0.40355 7.63359
436 4ARF IP8 GLY PRO ALA 0.00704 0.40351 7.63359
437 2C1Q BTN 0.007415 0.43233 7.93651
438 4LFL TG6 0.001182 0.42749 8.02469
439 9LDT NAD 0.0003536 0.48131 8.39695
440 9LDB NAD 0.0003648 0.48073 8.39695
441 2YPO PHE 0.0003818 0.47835 8.39695
442 1IUP ALQ 0.0006297 0.46888 8.39695
443 1LVL NAD 0.000764 0.4516 8.39695
444 2CE7 ADP 0.000494 0.44807 8.39695
445 4P05 4NS 0.001919 0.43669 8.39695
446 1CBF SAH 0.001203 0.43484 8.39695
447 1H16 PYR 0.00004009 0.43152 8.39695
448 1PEA ACM 0.003306 0.43 8.39695
449 1LVL FAD 0.01027 0.42965 8.39695
450 3IL6 B83 0.002442 0.42855 8.39695
451 4KCT FDP 0.0001447 0.42538 8.39695
452 3IOI 1GW 0.009701 0.41949 8.39695
453 1LC8 33P 0.007764 0.41721 8.39695
454 2W1A TSA 0.002161 0.41706 8.39695
455 3H22 B53 0.002367 0.41549 8.39695
456 4K30 NLG 0.002326 0.41007 8.39695
457 2DUA OXL 0.008423 0.40613 8.39695
458 5D63 FUC GAL GLA 0.00368 0.40516 8.39695
459 1RY2 AMP 0.01517 0.40325 8.39695
460 3GM5 CIT 0.007198 0.40174 8.39695
461 3S9K CIT 0.002094 0.45894 8.47458
462 2C31 TZD 0.0008511 0.49948 9.16031
463 1R6D NAD 0.0009763 0.48473 9.16031
464 1R6D DAU 0.0009358 0.48473 9.16031
465 1RM4 NDP 0.0003683 0.4742 9.16031
466 2OYS FMN 0.0003435 0.46614 9.16031
467 2C7G FAD 0.004333 0.45602 9.16031
468 1H2B NAJ 0.001678 0.45435 9.16031
469 2C7G ODP 0.004541 0.4543 9.16031
470 2C31 ADP 0.008242 0.45131 9.16031
471 3CKJ CIT 0.00221 0.44073 9.16031
472 3WBF NAP 0.002987 0.43801 9.16031
473 4B4D FAD 0.001867 0.43534 9.16031
474 3A1I UNU 0.0001572 0.43253 9.16031
475 3WBF API 0.006747 0.42765 9.16031
476 4QN7 G39 0.00823 0.4261 9.16031
477 3PVT 3HC 0.009509 0.42542 9.16031
478 1DR1 HBI 0.01332 0.41883 9.16031
479 1DR1 NAP 0.01332 0.41883 9.16031
480 2NZ2 ASP 0.001942 0.41312 9.16031
481 4UBP HAE 0.006381 0.41207 9.16031
482 4B7J G39 0.02104 0.40572 9.16031
483 1R0X ATP 0.02277 0.40419 9.16031
484 3SUC ATP 0.03257 0.4022 9.16031
485 1GPJ CIT 0.0003559 0.42637 9.40594
486 1BTN I3P 0.004388 0.46239 9.43396
487 1V2X SAM 0.000682 0.45162 9.92366
488 1TDF NAP 0.0119 0.4436 9.92366
489 4HZD COA 0.005186 0.43504 9.92366
490 2DTJ THR 0.0007643 0.43503 9.92366
491 1TDF FAD 0.009934 0.4329 9.92366
492 1QPB TPP 0.003589 0.43166 9.92366
493 1QPB PYM 0.003589 0.43166 9.92366
494 1C0I FAD 0.01093 0.43015 9.92366
495 1C0I BE2 0.01093 0.43015 9.92366
496 1JIL 485 0.002288 0.42973 9.92366
497 3NYQ MCA 0.006888 0.42605 9.92366
498 1QO0 BMD 0.002125 0.42404 9.92366
499 3BL6 FMC 0.003691 0.41914 9.92366
500 3NYQ AMP 0.01139 0.41758 9.92366
501 1KOL NAD 0.01365 0.41733 9.92366
502 3SQG TP7 0.003885 0.41406 9.92366
503 3GWT 066 0.01243 0.41354 9.92366
504 4EPL JAI 0.004093 0.41313 9.92366
505 3PY5 AMP 0.004326 0.41215 9.92366
506 3QO8 SSA 0.004674 0.41078 9.92366
507 3B1F NAD 0.009362 0.40763 9.92366
508 3BK2 U5P 0.005065 0.4048 9.92366
509 4IU0 ABH 0.012 0.40307 9.92366
510 2W8Q SIN 0.001065 0.40011 9.92366
511 1UW1 ADP 0.001399 0.41236 10
512 1Q3P GLU ALA GLN THR ARG LEU 0.001287 0.43364 10.0917
513 2Q1S NAI 0.001064 0.47465 10.687
514 2R14 TXD 0.001134 0.45915 10.687
515 2R14 FMN 0.0008244 0.45915 10.687
516 2HFK E4H 0.0002289 0.44936 10.687
517 4B9E FAH 0.0008155 0.44923 10.687
518 4IAE 1DX 0.005026 0.44868 10.687
519 1FP1 SAH 0.0006978 0.44448 10.687
520 2BLE 5GP 0.0114 0.43831 10.687
521 1LCP PLU 0.002397 0.43765 10.687
522 1C4U IH1 0.001746 0.43363 10.687
523 1I1Q TRP 0.0008557 0.43015 10.687
524 4QVH COA 0.004144 0.4297 10.687
525 1V2G OCA 0.001653 0.42434 10.687
526 4GQB 0XU 0.02107 0.42155 10.687
527 3P3N AKG 0.002917 0.41825 10.687
528 4MWV BCZ 0.01785 0.4131 10.687
529 1Y7I SAL 0.001958 0.41298 10.687
530 1TRD PGH 0.004946 0.40522 10.687
531 2JBZ COA 0.04272 0.40306 10.687
532 1FP1 HCC 0.009175 0.40274 10.687
533 1Z6K OAA 0.005792 0.40125 10.687
534 2Q97 ATP 0.002803 0.42975 10.8527
535 4LTN NAI 0.002166 0.4643 11.4504
536 1VDC FAD 0.003414 0.45518 11.4504
537 2J7T 274 0.002011 0.44547 11.4504
538 2ZE3 AKG 0.0002792 0.43759 11.4504
539 2DDH HXD 0.002071 0.43346 11.4504
540 4RJK PYR 0.003017 0.43181 11.4504
541 4COQ SAN 0.001601 0.4292 11.4504
542 1O7N IND 0.003337 0.42656 11.4504
543 4LTN FMN 0.01389 0.42363 11.4504
544 2ZI8 SDT 0.00661 0.42301 11.4504
545 2QS8 MET 0.008756 0.41769 11.4504
546 4CMF PXG 0.02427 0.41721 11.4504
547 4AMV F6R 0.004258 0.41243 11.4504
548 4JP3 CIT 0.0004185 0.41006 11.4504
549 2HXT EHM 0.005431 0.40591 11.4504
550 4LCQ URQ 0.01643 0.40576 11.4504
551 2ZX7 ZX7 0.02159 0.40237 11.4504
552 2V5E SCR 0.0137 0.41629 11.8812
553 4GYW UDP 0.0004894 0.47658 12.2137
554 1IYE PGU 0.001228 0.45765 12.2137
555 2J8Z NAP 0.001613 0.44963 12.2137
556 3KJQ B94 0.00004889 0.44355 12.2137
557 3PFG TLO 0.005114 0.44063 12.2137
558 3PFG SAM 0.005114 0.44063 12.2137
559 3NKS FAD 0.004793 0.43878 12.2137
560 1WUR 8DG 0.001827 0.43759 12.2137
561 3NKS ACJ 0.001208 0.43477 12.2137
562 2PUL ACP 0.002341 0.42304 12.2137
563 2EFJ SAH 0.002811 0.42197 12.2137
564 4AQL TXC 0.00387 0.41626 12.2137
565 1EYQ NAR 0.002045 0.41523 12.2137
566 3LPF Z77 0.00966 0.41312 12.2137
567 4I9A NCN 0.01167 0.41225 12.2137
568 3UH0 TSB 0.0001699 0.48306 12.9771
569 1I2B USQ 0.002421 0.4671 12.9771
570 1I2B NAD 0.002421 0.4671 12.9771
571 1I2B UPG 0.002421 0.4671 12.9771
572 1GSA ADP 0.001948 0.46643 12.9771
573 1GSA GSH 0.002699 0.45422 12.9771
574 1YS4 NAP 0.001731 0.43858 12.9771
575 3MPI GRA 0.01004 0.4374 12.9771
576 3HZS M0E 0.01106 0.42637 12.9771
577 4MZ7 DGT 0.006078 0.42592 12.9771
578 4MZ7 DTP 0.006207 0.42552 12.9771
579 3ICC NAP 0.009267 0.42037 12.9771
580 1Y42 TYR 0.001461 0.41795 12.9771
581 3VPQ GSH 0.001398 0.41195 12.9771
582 3FMI KAP 0.01871 0.41042 12.9771
583 3MPI FAD 0.02244 0.4066 12.9771
584 3TXO 07U 0.006094 0.40388 12.9771
585 2Z9V PXM 0.004106 0.40042 12.9771
586 2E1A MSE 0.0004209 0.42891 13.3333
587 4FGC PQ0 0.0003424 0.43395 13.7405
588 1KBJ FMN 0.003548 0.43035 13.7405
589 1B9I PXG 0.003505 0.42736 13.7405
590 1G8S MET 0.001853 0.42654 13.7405
591 1AX2 NDG GAL 0.0009145 0.42589 13.7405
592 1TIW TFB 0.02387 0.40835 13.7405
593 1TIW FAD 0.02387 0.40835 13.7405
594 4C0C WVH 0.03402 0.4065 13.7405
595 4O8A FAD 0.01842 0.40601 13.7405
596 1QB7 ADE 0.004192 0.4056 13.7405
597 2BNE U5P 0.000601 0.47471 14.5038
598 3OND ADN 0.001402 0.47302 14.5038
599 3OND NAD 0.001402 0.47302 14.5038
600 1V1A ADP 0.001065 0.45747 14.5038
601 3LST SAH 0.0006046 0.44452 14.5038
602 2IXB A2G 0.005309 0.43785 14.5038
603 2IXB NAD 0.003476 0.43785 14.5038
604 3BRE C2E 0.001273 0.43338 14.5038
605 1XHL NDP 0.004697 0.43338 14.5038
606 1V1A KDG 0.002849 0.42672 14.5038
607 4OJ8 2TQ 0.004467 0.42121 14.5038
608 2HGZ PBF 0.006081 0.41879 14.5038
609 3KJI ADP 0.003028 0.41848 14.5038
610 4C0X FMN 0.0139 0.40629 14.5038
611 4OJ8 AKG 0.008482 0.406 14.5038
612 4C0X AQN 0.02033 0.40411 14.5038
613 3OG9 MLT 0.009881 0.4021 14.5038
614 1EP2 ORO 0.005223 0.43375 14.9425
615 1EP2 FMN 0.006496 0.42197 14.9425
616 1EP2 FAD 0.01049 0.40715 14.9425
617 4HA6 FAD 0.001968 0.46246 15.2672
618 2PJL 047 0.001524 0.45684 15.2672
619 1WNG SAH 0.001658 0.43556 15.2672
620 4HA6 PXM 0.0005017 0.42728 15.2672
621 3I51 45C 0.0002255 0.41979 15.2672
622 1TUF AZ1 0.005888 0.41939 15.2672
623 1FWE HAE 0.002739 0.41023 15.2672
624 2PT9 S4M 0.0008711 0.45648 16.0305
625 2PT9 2MH 0.002146 0.45088 16.0305
626 1MVN PCO 0.01175 0.43599 16.0305
627 1PL6 572 0.004466 0.43557 16.0305
628 1VJT NAD 0.002598 0.42744 16.0305
629 3ZPG 5GP 0.005826 0.42638 16.0305
630 1PL6 NAD 0.003902 0.42369 16.0305
631 1MVN FMN 0.01834 0.41355 16.0305
632 1T0S BML 0.007065 0.41495 16.2791
633 1RKD ADP 0.001999 0.44971 16.7939
634 1RKD RIB 0.001999 0.44971 16.7939
635 4IVG ANP 0.002454 0.43393 16.7939
636 1H6W SER LEU ASN TYR ILE ILE LYS VAL LYS GLU 0.01526 0.42626 16.7939
637 4BT5 23B 0.002097 0.4148 16.7939
638 1LNX URI 0.003725 0.40208 17.284
639 1Y1A GSH 0.002898 0.46907 17.5573
640 1ZK7 FAD 0.001713 0.46714 17.5573
641 2PTZ PAH 0.000362 0.45611 17.5573
642 4M51 BEZ 0.001846 0.44153 17.5573
643 1QS0 TDP 0.002359 0.42918 17.5573
644 4NES UD1 0.002229 0.42821 17.5573
645 4NES UDP 0.003112 0.42015 17.5573
646 1V6A TRE 0.003845 0.40715 17.5573
647 2BJK NAD 0.04708 0.40536 17.5573
648 2ZJ5 ADP 0.004779 0.40332 17.5573
649 2EB5 OXL 0.00003656 0.49814 18.3206
650 1NZY BCA 0.0004468 0.47225 18.3206
651 2PWY SAH 0.0004068 0.467 18.3206
652 1Z45 NAD 0.0008652 0.46287 18.3206
653 1LDM NAD 0.01171 0.44035 18.3206
654 2HV8 GTP 0.003232 0.43051 18.3206
655 2QDT I38 0.002136 0.42466 18.3206
656 4R3L COA 0.002348 0.4241 18.3206
657 1I0Z OXM 0.01338 0.40913 18.3206
658 3WO0 ALA 0.02427 0.40608 18.3206
659 3WO0 ADP 0.02427 0.40608 18.3206
660 1Z45 UPG 0.008581 0.40395 18.3206
661 3ZS7 ATP 0.000957 0.44942 19.084
662 3QV9 QV7 0.001717 0.42133 19.084
663 1GJW GLC 0.0003596 0.46477 19.8473
664 1JUV NDP 0.001139 0.45311 19.8473
665 1G0N PHH 0.007188 0.43489 19.8473
666 1G0N NDP 0.007047 0.43231 19.8473
667 2PY4 DUP 0.007683 0.43212 19.8473
668 4Q3F TLA 0.003041 0.4022 20.5128
669 1R27 MGD 0.002074 0.45394 20.6107
670 3U4C NDP 0.006177 0.42429 20.6107
671 1QW9 KHP 0.009953 0.41113 20.6107
672 1FIQ MTE 0.001109 0.45817 22.1374
673 1FIQ SAL 0.001283 0.45817 22.1374
674 1FIQ FAD 0.003012 0.44436 22.1374
675 2X61 CH 0.006756 0.43415 22.1374
676 2X61 NGA GAL SIA 0.04147 0.41029 22.1374
677 1SSQ CYS 0.007242 0.43881 22.9008
678 1Q3Q ANP 0.01196 0.43597 22.9008
679 3C1O NAP 0.003224 0.43055 22.9008
680 2PFC PLM 0.005228 0.40425 23.6641
681 4HZO COA 0.002542 0.40856 24.4275
682 1SS4 GSH 0.001713 0.47963 25.1908
683 1SS4 CIT 0.01868 0.44854 25.1908
684 3IU9 T07 0.02297 0.4232 25.1908
685 1P4C FMN 0.01594 0.43514 26.7176
686 1RP0 AHZ 0.01457 0.43819 27.4809
687 2J0W ADP 0.002601 0.42336 27.4809
688 3JDW ORN 0.003011 0.41858 27.4809
689 2I4O ATP 0.002295 0.41602 27.4809
690 2HEK GDP 0.003405 0.40919 27.4809
691 4QDC ASD 0.004047 0.43015 28.2443
692 2QQF A1R 0.001851 0.44246 29.771
693 2OD9 A1R NCA 0.006675 0.42414 29.771
694 1NN5 ANP 0.008448 0.41966 30.5344
695 1NN5 2DT 0.008448 0.41966 30.5344
696 1EZV SMA 0.002843 0.43602 32.8244
697 2D0V PQQ 0.002076 0.4315 33.3333
698 2QLX RM4 0.0079 0.4061 33.3333
699 3BLI ACO 0.003356 0.42645 38.1679
700 2WCU FUC 0.000002001 0.60303 48.0916
701 2WCV FUC 0.000001661 0.57087 48.855
Pocket No.: 2; Query (leader) PDB : 1OGD; Ligand: RIP; Similar sites found: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 2) in the query (biounit: 1ogd.bio1) has 13 residues
No: Leader PDB Ligand P-value (APoc) PS_Score (APoc) Sequence Similarity
Pocket No.: 3; Query (leader) PDB : 1OGD; Ligand: RIP; Similar sites found: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 3) in the query (biounit: 1ogd.bio1) has 14 residues
No: Leader PDB Ligand P-value (APoc) PS_Score (APoc) Sequence Similarity
Pocket No.: 4; Query (leader) PDB : 1OGD; Ligand: RIP; Similar sites found: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 4) in the query (biounit: 1ogd.bio1) has 14 residues
No: Leader PDB Ligand P-value (APoc) PS_Score (APoc) Sequence Similarity
Pocket No.: 5; Query (leader) PDB : 1OGD; Ligand: RIP; Similar sites found: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 5) in the query (biounit: 1ogd.bio1) has 14 residues
No: Leader PDB Ligand P-value (APoc) PS_Score (APoc) Sequence Similarity
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