Receptor
PDB id Resolution Class Description Source Keywords
1OBZ 1.7 Å NON-ENZYME: SIGNAL_HORMONE CRYSTAL STRUCTURE OF THE COMPLEX OF THE PDZ TANDEM OF SYNTEN INTERLEUKIN 5 RECEPTOR ALPHA PEPTIDE. HOMO SAPIENS CELL ADHESION ADHESION-COMPLEX PDZ DOMAIN SIGNAL TRANSDUCNUCLEAR PROTEIN
Ref.: MOLECULAR ROOTS OF DEGENERATE SPECIFICITY IN SYNTEN DOMAIN: REASSESSMENT OF THE PDZ RECOGNITION PARADIG STRUCTURE V. 11 845 2003
Ligand
Ligand Chain:Residue Validity Ligand Warnings Binding Data NGL Viewer Molecular Weight (Da) Formula SMILES
ACT A:1274;
A:1275;
B:1273;
B:1274;
Invalid;
Invalid;
Invalid;
Invalid;
none;
none;
none;
none;
submit data
59.044 C2 H3 O2 CC(=O...
GLU THR LEU GLU ASP SER VAL PHE P:5;
Valid;
none;
submit data
464.475 n/a O=C([...
View in 3D viewer
90% Homology Family
Leader
PDB id Resolution Class Description Source Keywords
1W9O 2.25 Å NON-ENZYME: SIGNAL_HORMONE CRYSTAL STRUCTURE OF THE PDZ TANDEM OF HUMAN SYNTENIN IN COM TNEYYV PEPTIDE HOMO SAPIENS CELL ADHESION ADHESION-COMPLEX PDZ DOMAIN SCAFFOLDING PRO
Ref.: THE BINDING OF THE PDZ TANDEM OF SYNTENIN TO TARGET PROTEINS. BIOCHEMISTRY V. 45 3674 2006
Members (5)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 289 families.
1 1W9Q - THR ASN GLU PHE ALA PHE n/a n/a
2 1OBZ - GLU THR LEU GLU ASP SER VAL PHE n/a n/a
3 1V1T - THR ASN GLU TYR LYS VAL n/a n/a
4 1W9E Kd = 1 mM THR ASN GLU PHE TYR PHE n/a n/a
5 1W9O Kd = 0.74 mM THR ASN GLU TYR TYR VAL n/a n/a
70% Homology Family (5)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 214 families.
1 1W9Q - THR ASN GLU PHE ALA PHE n/a n/a
2 1OBZ - GLU THR LEU GLU ASP SER VAL PHE n/a n/a
3 1V1T - THR ASN GLU TYR LYS VAL n/a n/a
4 1W9E Kd = 1 mM THR ASN GLU PHE TYR PHE n/a n/a
5 1W9O Kd = 0.74 mM THR ASN GLU TYR TYR VAL n/a n/a
50% Homology Family (5)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 181 families.
1 1W9Q - THR ASN GLU PHE ALA PHE n/a n/a
2 1OBZ - GLU THR LEU GLU ASP SER VAL PHE n/a n/a
3 1V1T - THR ASN GLU TYR LYS VAL n/a n/a
4 1W9E Kd = 1 mM THR ASN GLU PHE TYR PHE n/a n/a
5 1W9O Kd = 0.74 mM THR ASN GLU TYR TYR VAL n/a n/a
Polypharmacology
Similar Ligands (2D)
Ligand no: 1; Ligand: GLU THR LEU GLU ASP SER VAL PHE; Similar ligands found: 44
No: Ligand ECFP6 Tc MDL keys Tc
1 GLU THR LEU GLU ASP SER VAL PHE 1 1
2 ASP PHE 0.676923 0.744186
3 ALA LEU ASP LEU PHE 0.635135 0.818182
4 ASP ASN ARG LEU GLY LEU VAL TYR GLN PHE 0.531915 0.692308
5 ACE MET GLU GLU VAL PHE 0.522222 0.673077
6 ALA PHE 0.521739 0.674419
7 ASP PHE SER ILE 0.511628 0.933333
8 ALA GLU THR PHE 0.488372 0.826087
9 LYS LYS SER LYS THR LYS CYS VAL ILE PHE 0.484536 0.854167
10 THR ASN GLU PHE ALA PHE 0.483516 0.729167
11 THR ASN GLU PHE TYR PHE 0.483516 0.673077
12 ASP ARG VAL TYR 0.483146 0.72549
13 VAL VAL SER HIS PHE ASN ASP 0.476636 0.796296
14 LEU ARG ASN GLN SER VAL PHE ASN PHE 0.473684 0.741379
15 ACE SER LEU ASN PHE 0.47191 0.934783
16 VAL GLN GLN GLU SER SER PHE VAL MET 0.466667 0.843137
17 PHE GLU ASP LEU ARG VAL LEU SER PHE 0.466102 0.767857
18 PHE GLU ASP LEU ARG VAL SER SER PHE 0.466102 0.767857
19 GLY ALA PHE THR PHE ASN GLU ASP PHE 0.456311 0.76
20 ACE LEU PHE 0.448718 0.733333
21 ASP SER 0.447761 0.813953
22 CYS VAL PHE MET 0.44086 0.755102
23 GLY ALA GLU VAL PHE TYR VAL ASP GLY ALA 0.4375 0.722222
24 PRO GLU SEP LEU GLU SER CYS PHE 0.435185 0.781818
25 TYR GLN GLU SER THR ASP PHE THR PHE LEU 0.43299 0.851064
26 GLY ALA GLN THR PHE TYR VAL ASP GLY ALA 0.424779 0.792453
27 PHE LEU 0.423077 0.727273
28 THR LYS ASN TYR LYS GLN PHE SER VAL 0.415929 0.781818
29 GLY ALA GLU THR PHE TYR VAL ASP GLY ALA 0.415254 0.777778
30 GLU ASN GLN LYS GLU TYR PHE PHE 0.415094 0.660714
31 ASP ASP LEU ASP VAL PRO SER PHE LEU GLN 0.414634 0.704918
32 ASP GLU ASP LYS TRP ASP ASP PHE 0.414414 0.631579
33 GLU LEU ASP 1OL VAL GLU PHE 0.413793 0.755102
34 TYR GLN PHE 0.411111 0.647059
35 ASP ALA ASP GLU GLU ASP PHE 0.410526 0.765957
36 GLU THR PHE TYR VAL ASP GLY 0.409091 0.792453
37 LEU SER PRO ASP SER PHE LEU ASN ASP 0.406977 0.886364
38 PHE GLU ASP LEU ARG LEU LEU SER PHE 0.405172 0.767857
39 ALA GLU THR PHE TYR VAL ASP GLY 0.40367 0.784314
40 GLU GLN TYR LYS PHE TYR SER VAL 0.403509 0.763636
41 GLU THR HPH TYR VAL ASP 0.403509 0.714286
42 GLU VAL ASN 1OL ALA GLU PHE 0.403361 0.76
43 GLU GLU ASN LEU LEU ASP PHE VAL ARG PHE 0.403226 0.689655
44 THR ASN GLU TYR TYR VAL 0.4 0.730769
Similar Ligands (3D)
Ligand no: 1; Ligand: GLU THR LEU GLU ASP SER VAL PHE; Similar ligands found: 0
No: Ligand Similarity coefficient
Similar Binding Sites (Proteins are less than 50% similar to leader) APoc FAQ
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